def get_equivalent_widths(self, sub_window):
# Get ROI stats
stat_list = []
x_rois = []
for roi in sub_window.graph.rois[-2:]:
if roi is None:
continue
x_range, y_range = sub_window.graph._get_roi_coords(roi)
active_item = sub_window.graph.active_item
active_data = active_item.item
region = extract(active_data, x_range)
stat_list.append(stats(region))
x_rois.append(x_range)
# Determine feature bounds
if x_rois[0][1] < x_rois[1][0]:
feature_roi = (x_rois[0][1], x_rois[1][0])
else:
feature_roi = (x_rois[1][1], x_rois[0][0])
# Get the equivalent width
self._results = eq_width(stat_list[0], stat_list[1], extract(active_data, feature_roi))
print 'Equivelent width = {}'.format(self._results)
def get_equivalent_widths(self, sub_window):
# Get ROI stats
stat_list = []
x_rois = []
for roi in sub_window.graph.rois[-2:]:
if roi is None:
continue
x_range, y_range = sub_window.graph._get_roi_coords(roi)
active_item = sub_window.graph.active_item
active_data = active_item.item
region = extract(active_data, x_range)
stat_list.append(stats(region))
x_rois.append(x_range)
# Determine feature bounds
if x_rois[0][1] < x_rois[1][0]:
feature_roi = (x_rois[0][1], x_rois[1][0])
else:
feature_roi = (x_rois[1][1], x_rois[0][0])
# Get the equivalent width
self._results = eq_width(stat_list[0], stat_list[1],
extract(active_data, feature_roi))
print 'Equivelent width = {}'.format(self._results)
def get_equivalent_widths(self, sub_window):
active_item = sub_window.graph.active_item
active_data = active_item.item
# Get ROI stats
stat_list = []
x_rois = []
for roi in sub_window.graph.rois[-2:]:
if roi is None:
continue
x_range, y_range = sub_window.graph._get_roi_coords(roi)
region = extract(active_data, x_range)
stat_list.append(stats(region))
x_rois.append(x_range)
# Determine feature bounds
if x_rois[0][1] < x_rois[1][0]:
feature_roi = (x_rois[0][1], x_rois[1][0])
else:
feature_roi = (x_rois[1][1], x_rois[0][0])
# Get the equivalent width
result = self.ops.eq_width(stat_list[0],
stat_list[1],
extract(active_data, feature_roi))
# Report
self.viewer.equiv_width_dock.set_labels(result,
stat_list[0],
stat_list[1],
data_name=active_item.parent.text(),
layer_name=active_item.text())
self.viewer.equiv_width_dock.show()
def get_measurements(self, sub_window):
roi = sub_window.graph._active_roi
if roi is None:
return
x_range, y_range = sub_window.graph._get_roi_coords(roi)
active_item = sub_window.graph.active_item
active_data = active_item.item
region = extract(active_data, x_range)
stat = stats(region)
self.viewer.measurement_dock.set_labels(stat,
data_name=active_item.parent.text(),
layer_name=active_item.text())
self.viewer.measurement_dock.show()
def get_measurements(self, sub_window):
roi = sub_window.graph._active_roi
if roi is None:
return
x_range, y_range = sub_window.graph._get_roi_coords(roi)
active_item = sub_window.graph.active_item
active_data = active_item.item
region = extract(active_data, x_range)
stat = stats(region)
self.viewer.measurement_dock.set_labels(
stat,
data_name=active_item.parent.text(),
layer_name=active_item.text())
self.viewer.measurement_dock.show()
self._results = stat
