class FileSwitcher(QDialog):
"""A Sublime-like file switcher."""
sig_goto_file = Signal(int)
sig_close_file = Signal(int)
# Constants that define the mode in which the list widget is working
# FILE_MODE is for a list of files, SYMBOL_MODE if for a list of symbols
# in a given file when using the '@' symbol.
FILE_MODE, SYMBOL_MODE = [1, 2]
def __init__(self, parent, tabs, data):
QDialog.__init__(self, parent)
# Variables
self.tabs = tabs # Editor stack tabs
self.data = data # Editor data
self.mode = self.FILE_MODE # By default start in this mode
self.initial_cursors = None # {fullpath: QCursor}
self.initial_path = None # Fullpath of initial active editor
self.initial_editor = None # Initial active editor
self.line_number = None # Selected line number in filer
help_text = _("Press <b>Enter</b> to switch files or <b>Esc</b> to "
"cancel.<br><br>Type to filter filenames.<br><br>"
"Use <b>:number</b> to go to a line, e.g. "
"<b><code>main:42</code></b><br>"
"Use <b>@symbol_text</b> to go to a symbol, e.g. "
"<b><code>@init</code></b>"
"<br><br> Press <b>Ctrl+W</b> to close current tab.<br>")
# Either allow searching for a line number or a symbol but not both
regex = QRegExp("([A-Za-z0-9_]{0,100}@[A-Za-z0-9_]{0,100})|" +
"([A-Za-z]{0,100}:{0,1}[0-9]{0,100})")
# Widgets
self.edit = QLineEdit(self)
self.help = HelperToolButton()
self.list = QListWidget(self)
self.filter = KeyPressFilter()
regex_validator = QRegExpValidator(regex, self.edit)
# Widgets setup
self.setWindowFlags(Qt.Popup | Qt.FramelessWindowHint)
self.setWindowOpacity(0.95)
self.edit.installEventFilter(self.filter)
self.edit.setValidator(regex_validator)
self.help.setToolTip(help_text)
self.list.setItemDelegate(HTMLDelegate(self))
# Layout
edit_layout = QHBoxLayout()
edit_layout.addWidget(self.edit)
edit_layout.addWidget(self.help)
layout = QVBoxLayout()
layout.addLayout(edit_layout)
layout.addWidget(self.list)
self.setLayout(layout)
# Signals
self.rejected.connect(self.restore_initial_state)
self.filter.sig_up_key_pressed.connect(self.previous_row)
self.filter.sig_down_key_pressed.connect(self.next_row)
self.edit.returnPressed.connect(self.accept)
self.edit.textChanged.connect(self.setup)
self.list.itemSelectionChanged.connect(self.item_selection_changed)
self.list.clicked.connect(self.edit.setFocus)
# Setup
self.save_initial_state()
self.set_dialog_position()
self.setup()
# --- Properties
@property
def editors(self):
return [self.tabs.widget(index) for index in range(self.tabs.count())]
@property
def line_count(self):
return [editor.get_line_count() for editor in self.editors]
@property
def save_status(self):
return [getattr(td, 'newly_created', False) for td in self.data]
@property
def paths(self):
return [getattr(td, 'filename', None) for td in self.data]
@property
def filenames(self):
return [self.tabs.tabText(index) for index in range(self.tabs.count())]
@property
def current_path(self):
return self.paths_by_editor[self.get_editor()]
@property
def paths_by_editor(self):
return dict(zip(self.editors, self.paths))
@property
def editors_by_path(self):
return dict(zip(self.paths, self.editors))
@property
def filter_text(self):
"""Get the normalized (lowecase) content of the filter text."""
return to_text_string(self.edit.text()).lower()
def save_initial_state(self):
"""Saves initial cursors and initial active editor."""
paths = self.paths
self.initial_editor = self.get_editor()
self.initial_cursors = {}
for i, editor in enumerate(self.editors):
if editor is self.initial_editor:
self.initial_path = paths[i]
self.initial_cursors[paths[i]] = editor.textCursor()
def accept(self):
QDialog.accept(self)
self.list.clear()
def restore_initial_state(self):
"""Restores initial cursors and initial active editor."""
self.list.clear()
editors = self.editors_by_path
for path in self.initial_cursors:
cursor = self.initial_cursors[path]
if path in editors:
self.set_editor_cursor(editors[path], cursor)
if self.initial_editor in self.paths_by_editor:
index = self.paths.index(self.initial_path)
self.sig_goto_file.emit(index)
def set_dialog_position(self):
"""Positions the file switcher dialog in the center of the editor."""
parent = self.parent()
geo = parent.geometry()
width = self.list.width() # This has been set in setup
left = parent.geometry().width() / 2 - width / 2
top = 0
while parent:
geo = parent.geometry()
top += geo.top()
left += geo.left()
parent = parent.parent()
# Note: the +1 pixel on the top makes it look better
self.move(left, top + self.tabs.tabBar().geometry().height() + 1)
def fix_size(self, content, extra=50):
"""Adjusts the width of the file switcher, based on the content."""
# Update size of dialog based on longest shortened path
strings = []
if content:
for rich_text in content:
label = QLabel(rich_text)
label.setTextFormat(Qt.PlainText)
strings.append(label.text())
fm = label.fontMetrics()
max_width = max([fm.width(s) * 1.3 for s in strings])
self.list.setMinimumWidth(max_width + extra)
self.set_dialog_position()
# --- Helper methods: List widget
def count(self):
"""Gets the item count in the list widget."""
return self.list.count()
def current_row(self):
"""Returns the current selected row in the list widget."""
return self.list.currentRow()
def set_current_row(self, row):
"""Sets the current selected row in the list widget."""
return self.list.setCurrentRow(row)
def select_row(self, steps):
"""Select row in list widget based on a number of steps with direction.
Steps can be positive (next rows) or negative (previous rows).
"""
row = self.current_row() + steps
if 0 <= row < self.count():
self.set_current_row(row)
def previous_row(self):
"""Select previous row in list widget."""
self.select_row(-1)
def next_row(self):
"""Select next row in list widget."""
self.select_row(+1)
# --- Helper methods: Editor
def get_editor(self, index=None, path=None):
"""Get editor by index or path.
If no path or index specified the current active editor is returned
"""
if index:
return self.tabs.widget(index)
elif path:
return self.tabs.widget(index)
else:
return self.parent().get_current_editor()
def set_editor_cursor(self, editor, cursor):
"""Set the cursor of an editor."""
pos = cursor.position()
anchor = cursor.anchor()
new_cursor = QTextCursor()
if pos == anchor:
new_cursor.movePosition(pos)
else:
new_cursor.movePosition(anchor)
new_cursor.movePosition(pos, QTextCursor.KeepAnchor)
editor.setTextCursor(cursor)
def goto_line(self, line_number):
"""Go to specified line number in current active editor."""
if line_number:
line_number = int(line_number)
editor = self.get_editor()
editor.go_to_line(min(line_number, editor.get_line_count()))
# --- Helper methods: Outline explorer
def get_symbol_list(self):
"""Get the object explorer data."""
return self.get_editor().highlighter.get_outlineexplorer_data()
# --- Handlers
def item_selection_changed(self):
"""List widget item selection change handler."""
row = self.current_row()
if self.count() and row >= 0:
if self.mode == self.FILE_MODE:
try:
stack_index = self.paths.index(self.filtered_path[row])
self.sig_goto_file.emit(stack_index)
self.goto_line(self.line_number)
self.edit.setFocus()
except ValueError:
pass
else:
line_number = self.filtered_symbol_lines[row]
self.goto_line(line_number)
def setup_file_list(self, filter_text, current_path):
"""Setup list widget content for file list display."""
short_paths = shorten_paths(self.paths, self.save_status)
paths = self.paths
results = []
trying_for_line_number = ':' in filter_text
# Get optional line number
if trying_for_line_number:
filter_text, line_number = filter_text.split(':')
else:
line_number = None
# Get all available filenames and get the scores for "fuzzy" matching
scores = get_search_scores(filter_text,
self.filenames,
template="<b>{0}</b>")
# Build the text that will appear on the list widget
for index, score in enumerate(scores):
text, rich_text, score_value = score
if score_value != -1:
text_item = '<big>' + rich_text + '</big>'
if trying_for_line_number:
text_item += " [{0:} {1:}]".format(self.line_count[index],
_("lines"))
text_item += "<br><i>{0:}</i>".format(short_paths[index])
results.append((score_value, index, text_item))
# Sort the obtained scores and populate the list widget
self.filtered_path = []
for result in sorted(results):
index = result[1]
text = result[-1]
path = paths[index]
item = QListWidgetItem(self.tabs.tabIcon(index), text)
item.setToolTip(path)
item.setSizeHint(QSize(0, 25))
self.list.addItem(item)
self.filtered_path.append(path)
# Move selected item in list accordingly and update list size
if current_path in self.filtered_path:
self.set_current_row(self.filtered_path.index(current_path))
elif self.filtered_path:
self.set_current_row(0)
self.fix_size(short_paths)
# If a line number is searched look for it
self.line_number = line_number
self.goto_line(line_number)
def setup_symbol_list(self, filter_text, current_path):
"""Setup list widget content for symbol list display."""
# Get optional symbol name
filter_text, symbol_text = filter_text.split('@')
# Fetch the Outline explorer data, get the icons and values
oedata = self.get_symbol_list()
icons = get_python_symbol_icons(oedata)
symbol_list = process_python_symbol_data(oedata)
line_fold_token = [(item[0], item[2], item[3]) for item in symbol_list]
choices = [item[1] for item in symbol_list]
scores = get_search_scores(symbol_text, choices, template="<b>{0}</b>")
# Build the text that will appear on the list widget
results = []
lines = []
self.filtered_symbol_lines = []
for index, score in enumerate(scores):
text, rich_text, score_value = score
line, fold_level, token = line_fold_token[index]
lines.append(text)
if score_value != -1:
results.append((score_value, line, text, rich_text, fold_level,
icons[index], token))
template_1 = '<code>{0}<big>{1} {2}</big></code>'
template_2 = '<br><code>{0}</code><i>[Line {1}]</i>'
for (score, line, text, rich_text, fold_level, icon,
token) in sorted(results):
fold_space = ' ' * (fold_level)
line_number = line + 1
self.filtered_symbol_lines.append(line_number)
textline = template_1.format(fold_space, token, rich_text)
textline += template_2.format(fold_space, line_number)
item = QListWidgetItem(icon, textline)
item.setSizeHint(QSize(0, 16))
self.list.addItem(item)
# Move selected item in list accordingly
# NOTE: Doing this is causing two problems:
# 1. It makes the cursor to auto-jump to the last selected
# symbol after opening or closing a different file
# 2. It moves the cursor to the first symbol by default,
# which is very distracting.
# That's why this line is commented!
# self.set_current_row(0)
# Update list size
self.fix_size(lines, extra=125)
def setup(self):
"""Setup list widget content."""
if not self.tabs.count():
self.close()
return
self.list.clear()
current_path = self.current_path
filter_text = self.filter_text
# Get optional line or symbol to define mode and method handler
trying_for_symbol = ('@' in self.filter_text)
if trying_for_symbol:
self.mode = self.SYMBOL_MODE
self.setup_symbol_list(filter_text, current_path)
else:
self.mode = self.FILE_MODE
self.setup_file_list(filter_text, current_path)
class PathManager(QDialog):
def __init__(self, parent=None, pathlist=None, ro_pathlist=None, sync=True):
QDialog.__init__(self, parent)
# Destroying the C++ object right after closing the dialog box,
# otherwise it may be garbage-collected in another QThread
# (e.g. the editor's analysis thread in Spyder), thus leading to
# a segmentation fault on UNIX or an application crash on Windows
self.setAttribute(Qt.WA_DeleteOnClose)
assert isinstance(pathlist, list)
self.pathlist = pathlist
if ro_pathlist is None:
ro_pathlist = []
self.ro_pathlist = ro_pathlist
self.last_path = getcwd()
self.setWindowTitle(_("PYTHONPATH manager"))
self.setWindowIcon(get_icon('pythonpath.png'))
self.resize(500, 300)
self.selection_widgets = []
layout = QVBoxLayout()
self.setLayout(layout)
top_layout = QHBoxLayout()
layout.addLayout(top_layout)
self.toolbar_widgets1 = self.setup_top_toolbar(top_layout)
self.listwidget = QListWidget(self)
self.connect(self.listwidget, SIGNAL("currentRowChanged(int)"),
self.refresh)
layout.addWidget(self.listwidget)
bottom_layout = QHBoxLayout()
layout.addLayout(bottom_layout)
self.sync_button = None
self.toolbar_widgets2 = self.setup_bottom_toolbar(bottom_layout, sync)
# Buttons configuration
bbox = QDialogButtonBox(QDialogButtonBox.Close)
self.connect(bbox, SIGNAL("rejected()"), SLOT("reject()"))
bottom_layout.addWidget(bbox)
self.update_list()
self.refresh()
def _add_widgets_to_layout(self, layout, widgets):
layout.setAlignment(Qt.AlignLeft)
for widget in widgets:
layout.addWidget(widget)
def setup_top_toolbar(self, layout):
toolbar = []
movetop_button = create_toolbutton(self,
text=_("Move to top"),
icon=get_icon('2uparrow.png'),
triggered=lambda: self.move_to(absolute=0),
text_beside_icon=True)
toolbar.append(movetop_button)
moveup_button = create_toolbutton(self,
text=_("Move up"),
icon=get_icon('1uparrow.png'),
triggered=lambda: self.move_to(relative=-1),
text_beside_icon=True)
toolbar.append(moveup_button)
movedown_button = create_toolbutton(self,
text=_("Move down"),
icon=get_icon('1downarrow.png'),
triggered=lambda: self.move_to(relative=1),
text_beside_icon=True)
toolbar.append(movedown_button)
movebottom_button = create_toolbutton(self,
text=_("Move to bottom"),
icon=get_icon('2downarrow.png'),
triggered=lambda: self.move_to(absolute=1),
text_beside_icon=True)
toolbar.append(movebottom_button)
self.selection_widgets.extend(toolbar)
self._add_widgets_to_layout(layout, toolbar)
return toolbar
def setup_bottom_toolbar(self, layout, sync=True):
toolbar = []
add_button = create_toolbutton(self, text=_("Add path"),
icon=get_icon('edit_add.png'),
triggered=self.add_path,
text_beside_icon=True)
toolbar.append(add_button)
remove_button = create_toolbutton(self, text=_("Remove path"),
icon=get_icon('edit_remove.png'),
triggered=self.remove_path,
text_beside_icon=True)
toolbar.append(remove_button)
self.selection_widgets.append(remove_button)
self._add_widgets_to_layout(layout, toolbar)
layout.addStretch(1)
if os.name == 'nt' and sync:
self.sync_button = create_toolbutton(self,
text=_("Synchronize..."),
icon=get_icon('synchronize.png'), triggered=self.synchronize,
tip=_("Synchronize Spyder's path list with PYTHONPATH "
"environment variable"),
text_beside_icon=True)
layout.addWidget(self.sync_button)
return toolbar
def synchronize(self):
"""
Synchronize Spyder's path list with PYTHONPATH environment variable
Only apply to: current user, on Windows platforms
"""
answer = QMessageBox.question(self, _("Synchronize"),
_("This will synchronize Spyder's path list with "
"<b>PYTHONPATH</b> environment variable for current user, "
"allowing you to run your Python modules outside Spyder "
"without having to configure sys.path. "
"<br>Do you want to clear contents of PYTHONPATH before "
"adding Spyder's path list?"),
QMessageBox.Yes | QMessageBox.No | QMessageBox.Cancel)
if answer == QMessageBox.Cancel:
return
elif answer == QMessageBox.Yes:
remove = True
else:
remove = False
from spyderlib.utils.environ import (get_user_env, set_user_env,
listdict2envdict)
env = get_user_env()
if remove:
ppath = self.pathlist+self.ro_pathlist
else:
ppath = env.get('PYTHONPATH', [])
if not isinstance(ppath, list):
ppath = [ppath]
ppath = [path for path in ppath
if path not in (self.pathlist+self.ro_pathlist)]
ppath.extend(self.pathlist+self.ro_pathlist)
env['PYTHONPATH'] = ppath
set_user_env( listdict2envdict(env), parent=self )
def get_path_list(self):
"""Return path list (does not include the read-only path list)"""
return self.pathlist
def update_list(self):
"""Update path list"""
self.listwidget.clear()
for name in self.pathlist+self.ro_pathlist:
item = QListWidgetItem(name)
item.setIcon(get_std_icon('DirClosedIcon'))
if name in self.ro_pathlist:
item.setFlags(Qt.NoItemFlags)
self.listwidget.addItem(item)
self.refresh()
def refresh(self, row=None):
"""Refresh widget"""
for widget in self.selection_widgets:
widget.setEnabled(self.listwidget.currentItem() is not None)
not_empty = self.listwidget.count() > 0
if self.sync_button is not None:
self.sync_button.setEnabled(not_empty)
def move_to(self, absolute=None, relative=None):
index = self.listwidget.currentRow()
if absolute is not None:
if absolute:
new_index = len(self.pathlist)-1
else:
new_index = 0
else:
new_index = index + relative
new_index = max(0, min(len(self.pathlist)-1, new_index))
path = self.pathlist.pop(index)
self.pathlist.insert(new_index, path)
self.update_list()
self.listwidget.setCurrentRow(new_index)
def remove_path(self):
answer = QMessageBox.warning(self, _("Remove path"),
_("Do you really want to remove selected path?"),
QMessageBox.Yes | QMessageBox.No)
if answer == QMessageBox.Yes:
self.pathlist.pop(self.listwidget.currentRow())
self.update_list()
def add_path(self):
self.emit(SIGNAL('redirect_stdio(bool)'), False)
directory = getexistingdirectory(self, _("Select directory"),
self.last_path)
self.emit(SIGNAL('redirect_stdio(bool)'), True)
if directory:
directory = osp.abspath(directory)
self.last_path = directory
if directory in self.pathlist:
answer = QMessageBox.question(self, _("Add path"),
_("This directory is already included in Spyder path "
"list.<br>Do you want to move it to the top of "
"the list?"),
QMessageBox.Yes | QMessageBox.No)
if answer == QMessageBox.Yes:
self.pathlist.remove(directory)
else:
return
self.pathlist.insert(0, directory)
self.update_list()
class FileSwitcher(QDialog):
"""A Sublime-like file switcher."""
sig_goto_file = Signal(int)
sig_close_file = Signal(int)
# Constants that define the mode in which the list widget is working
# FILE_MODE is for a list of files, SYMBOL_MODE if for a list of symbols
# in a given file when using the '@' symbol.
FILE_MODE, SYMBOL_MODE = [1, 2]
def __init__(self, parent, tabs, data):
QDialog.__init__(self, parent)
# Variables
self.tabs = tabs # Editor stack tabs
self.data = data # Editor data
self.mode = self.FILE_MODE # By default start in this mode
self.initial_cursors = None # {fullpath: QCursor}
self.initial_path = None # Fullpath of initial active editor
self.initial_editor = None # Initial active editor
self.line_number = None # Selected line number in filer
help_text = _("Press <b>Enter</b> to switch files or <b>Esc</b> to "
"cancel.<br><br>Type to filter filenames.<br><br>"
"Use <b>:number</b> to go to a line, e.g. "
"<b><code>main:42</code></b><br>"
"Use <b>@symbol_text</b> to go to a symbol, e.g. "
"<b><code>@init</code></b>"
"<br><br> Press <b>Ctrl+W</b> to close current tab.<br>")
# Either allow searching for a line number or a symbol but not both
regex = QRegExp("([A-Za-z0-9_]{0,100}@[A-Za-z0-9_]{0,100})|" +
"([A-Za-z]{0,100}:{0,1}[0-9]{0,100})")
# Widgets
self.edit = QLineEdit(self)
self.help = HelperToolButton()
self.list = QListWidget(self)
self.filter = KeyPressFilter()
regex_validator = QRegExpValidator(regex, self.edit)
# Widgets setup
self.setWindowFlags(Qt.Popup | Qt.FramelessWindowHint)
self.setWindowOpacity(0.95)
self.edit.installEventFilter(self.filter)
self.edit.setValidator(regex_validator)
self.help.setToolTip(help_text)
self.list.setItemDelegate(HTMLDelegate(self))
# Layout
edit_layout = QHBoxLayout()
edit_layout.addWidget(self.edit)
edit_layout.addWidget(self.help)
layout = QVBoxLayout()
layout.addLayout(edit_layout)
layout.addWidget(self.list)
self.setLayout(layout)
# Signals
self.rejected.connect(self.restore_initial_state)
self.filter.sig_up_key_pressed.connect(self.previous_row)
self.filter.sig_down_key_pressed.connect(self.next_row)
self.edit.returnPressed.connect(self.accept)
self.edit.textChanged.connect(self.setup)
self.list.itemSelectionChanged.connect(self.item_selection_changed)
self.list.clicked.connect(self.edit.setFocus)
# Setup
self.save_initial_state()
self.set_dialog_position()
self.setup()
# --- Properties
@property
def editors(self):
return [self.tabs.widget(index) for index in range(self.tabs.count())]
@property
def line_count(self):
return [editor.get_line_count() for editor in self.editors]
@property
def save_status(self):
return [getattr(td, 'newly_created', False) for td in self.data]
@property
def paths(self):
return [getattr(td, 'filename', None) for td in self.data]
@property
def filenames(self):
return [self.tabs.tabText(index) for index in range(self.tabs.count())]
@property
def current_path(self):
return self.paths_by_editor[self.get_editor()]
@property
def paths_by_editor(self):
return dict(zip(self.editors, self.paths))
@property
def editors_by_path(self):
return dict(zip(self.paths, self.editors))
@property
def filter_text(self):
"""Get the normalized (lowecase) content of the filter text."""
return to_text_string(self.edit.text()).lower()
def save_initial_state(self):
"""Saves initial cursors and initial active editor."""
paths = self.paths
self.initial_editor = self.get_editor()
self.initial_cursors = {}
for i, editor in enumerate(self.editors):
if editor is self.initial_editor:
self.initial_path = paths[i]
self.initial_cursors[paths[i]] = editor.textCursor()
def restore_initial_state(self):
"""Restores initial cursors and initial active editor."""
editors = self.editors_by_path
for path in self.initial_cursors:
cursor = self.initial_cursors[path]
if path in editors:
self.set_editor_cursor(editors[path], cursor)
if self.initial_editor in self.paths_by_editor:
index = self.paths.index(self.initial_path)
self.sig_goto_file.emit(index)
def set_dialog_position(self):
"""Positions the file switcher dialog in the center of the editor."""
parent = self.parent()
geo = parent.geometry()
width = self.list.width() # This has been set in setup
left = parent.geometry().width()/2 - width/2
top = 0
while parent:
geo = parent.geometry()
top += geo.top()
left += geo.left()
parent = parent.parent()
# Note: the +1 pixel on the top makes it look better
self.move(left, top + self.tabs.tabBar().geometry().height() + 1)
def fix_size(self, content, extra=50):
"""Adjusts the width of the file switcher, based on the content."""
# Update size of dialog based on longest shortened path
strings = []
if content:
for rich_text in content:
label = QLabel(rich_text)
label.setTextFormat(Qt.PlainText)
strings.append(label.text())
fm = label.fontMetrics()
max_width = max([fm.width(s)*1.3 for s in strings])
self.list.setMinimumWidth(max_width + extra)
self.set_dialog_position()
# --- Helper methods: List widget
def count(self):
"""Gets the item count in the list widget."""
return self.list.count()
def current_row(self):
"""Returns the current selected row in the list widget."""
return self.list.currentRow()
def set_current_row(self, row):
"""Sets the current selected row in the list widget."""
return self.list.setCurrentRow(row)
def select_row(self, steps):
"""Select row in list widget based on a number of steps with direction.
Steps can be positive (next rows) or negative (previous rows).
"""
row = self.current_row() + steps
if 0 <= row < self.count():
self.set_current_row(row)
def previous_row(self):
"""Select previous row in list widget."""
self.select_row(-1)
def next_row(self):
"""Select next row in list widget."""
self.select_row(+1)
# --- Helper methods: Editor
def get_editor(self, index=None, path=None):
"""Get editor by index or path.
If no path or index specified the current active editor is returned
"""
if index:
return self.tabs.widget(index)
elif path:
return self.tabs.widget(index)
else:
return self.parent().get_current_editor()
def set_editor_cursor(self, editor, cursor):
"""Set the cursor of an editor."""
pos = cursor.position()
anchor = cursor.anchor()
new_cursor = QTextCursor()
if pos == anchor:
new_cursor.movePosition(pos)
else:
new_cursor.movePosition(anchor)
new_cursor.movePosition(pos, QTextCursor.KeepAnchor)
editor.setTextCursor(cursor)
def goto_line(self, line_number):
"""Go to specified line number in current active editor."""
if line_number:
line_number = int(line_number)
editor = self.get_editor()
editor.go_to_line(min(line_number, editor.get_line_count()))
# --- Helper methods: Outline explorer
def get_symbol_list(self):
"""Get the object explorer data."""
return self.get_editor().highlighter.get_outlineexplorer_data()
# --- Handlers
def item_selection_changed(self):
"""List widget item selection change handler."""
row = self.current_row()
if self.count() and row >= 0:
if self.mode == self.FILE_MODE:
try:
stack_index = self.paths.index(self.filtered_path[row])
self.sig_goto_file.emit(stack_index)
self.goto_line(self.line_number)
self.edit.setFocus()
except ValueError:
pass
else:
line_number = self.filtered_symbol_lines[row]
self.goto_line(line_number)
def setup_file_list(self, filter_text, current_path):
"""Setup list widget content for file list display."""
short_paths = shorten_paths(self.paths, self.save_status)
paths = self.paths
results = []
trying_for_line_number = ':' in filter_text
# Get optional line number
if trying_for_line_number:
filter_text, line_number = filter_text.split(':')
else:
line_number = None
# Get all available filenames and get the scores for "fuzzy" matching
scores = get_search_scores(filter_text, self.filenames,
template="<b>{0}</b>")
# Build the text that will appear on the list widget
for index, score in enumerate(scores):
text, rich_text, score_value = score
if score_value != -1:
text_item = '<big>' + rich_text + '</big>'
if trying_for_line_number:
text_item += " [{0:} {1:}]".format(self.line_count[index],
_("lines"))
text_item += "<br><i>{0:}</i>".format(
short_paths[index])
results.append((score_value, index, text_item))
# Sort the obtained scores and populate the list widget
self.filtered_path = []
for result in sorted(results):
index = result[1]
text = result[-1]
path = paths[index]
item = QListWidgetItem(self.tabs.tabIcon(index), text)
item.setToolTip(path)
item.setSizeHint(QSize(0, 25))
self.list.addItem(item)
self.filtered_path.append(path)
# Move selected item in list accordingly and update list size
if current_path in self.filtered_path:
self.set_current_row(self.filtered_path.index(current_path))
elif self.filtered_path:
self.set_current_row(0)
self.fix_size(short_paths)
# If a line number is searched look for it
self.line_number = line_number
self.goto_line(line_number)
def setup_symbol_list(self, filter_text, current_path):
"""Setup list widget content for symbol list display."""
# Get optional symbol name
filter_text, symbol_text = filter_text.split('@')
# Fetch the Outline explorer data, get the icons and values
oedata = self.get_symbol_list()
icons = get_python_symbol_icons(oedata)
symbol_list = process_python_symbol_data(oedata)
line_fold_token = [(item[0], item[2], item[3]) for item in symbol_list]
choices = [item[1] for item in symbol_list]
scores = get_search_scores(symbol_text, choices, template="<b>{0}</b>")
# Build the text that will appear on the list widget
results = []
lines = []
self.filtered_symbol_lines = []
for index, score in enumerate(scores):
text, rich_text, score_value = score
line, fold_level, token = line_fold_token[index]
lines.append(text)
if score_value != -1:
results.append((score_value, line, text, rich_text,
fold_level, icons[index], token))
template_1 = '<code>{0}<big>{1} {2}</big></code>'
template_2 = '<br><code>{0}</code><i>[Line {1}]</i>'
for (score, line, text, rich_text, fold_level, icon,
token) in sorted(results):
fold_space = ' '*(fold_level)
line_number = line + 1
self.filtered_symbol_lines.append(line_number)
textline = template_1.format(fold_space, token, rich_text)
textline += template_2.format(fold_space, line_number)
item = QListWidgetItem(icon, textline)
item.setSizeHint(QSize(0, 16))
self.list.addItem(item)
# Move selected item in list accordingly and update list size
self.set_current_row(0)
self.fix_size(lines, extra=125)
def setup(self):
"""Setup list widget content."""
if not self.tabs.count():
self.close()
return
self.list.clear()
current_path = self.current_path
filter_text = self.filter_text
# Get optional line or symbol to define mode and method handler
trying_for_symbol = ('@' in self.filter_text)
if trying_for_symbol:
self.mode = self.SYMBOL_MODE
self.setup_symbol_list(filter_text, current_path)
else:
self.mode = self.FILE_MODE
self.setup_file_list(filter_text, current_path)
class RateLawWidget(QWidget):
"""
Rate Law widget
"""
def __init__(self, parent, max_entries=100):
""" Creates a very basic window with some text """
"""
RATE_LAW_MESSAGE = \
"The Plugins for Spyder consists out of three main classes: \n\n" \
"1. HelloWorld\n\n" \
"\tThe HelloWorld class inherits all its methods from\n" \
"\tSpyderPluginMixin and the HelloWorldWidget and performs all\n" \
"\tthe processing required by the GU. \n\n" \
"2. HelloWorldConfigPage\n\n" \
"\tThe HelloWorldConfig class inherits all its methods from\n" \
"\tPluginConfigPage to create a configuration page that can be\n" \
"\tfound under Tools -> Preferences\n\n" \
"3. HelloWorldWidget\n\n" \
"\tThe HelloWorldWidget class inherits all its methods from\n" \
"\tQWidget to create the actual plugin GUI interface that \n" \
"\tdisplays this message on screen\n\n"
"""
#Testing access editor on plugin initialization
RATE_LAW_MESSAGE = ""
displaynamelist = []
#displaylist = []
infixlist = []
desclist = []
parameterstringlist = []
xmldoc = minidom.parse('\\.spyder2\\ratelaw2_0_3.xml')
#xmldoc = minidom.parse('%\\Downloads\\ratelaw2_0_3.xml')
lawlistxml = xmldoc.getElementsByTagName('law')
#i is the number of laws currently in the xml file
i = 0
for s in lawlistxml:
#RATE_LAW_MESSAGE += s.getAttribute('displayName') + "\n"
RATE_LAW_MESSAGE += s.getAttribute('display') + "\n"
#displaynamelist[i] = s.getAttribute('displayName')
#displaylist[i] = s.getAttribute('display')
displaynamelist.append(s.getAttribute('displayName'))
#displaylist.append(s.getAttribute('display'))
infixlist.append(s.getAttribute('infixExpression'))
desclist.append(s.getAttribute('description'))
parameterlist = s.getElementsByTagName('listOfParameters')[0]
#for p in parameterlist
parameters = parameterlist.getElementsByTagName('parameter')
parameterstring = ""
for param in parameters:
parametername = param.attributes['name'].value
parameterdesc = param.attributes['description'].value
parameterstring = parameterstring + '\t' + parametername + ":" + '\t' + " " + parameterdesc + "\n"
#print('\t' + parametername + ":" + '\t' + parameterdesc)
parameterstringlist.append(parameterstring)
i = i + 1
QWidget.__init__(self, parent)
self.setWindowTitle("Rate Law Library")
self.output = None
self.error_output = None
self._last_wdir = None
self._last_args = None
self._last_pythonpath = None
self.textlabel = QLabel(RATE_LAW_MESSAGE)
self.lawlist = QListWidget()
self.lawpage = QStackedWidget()
#Adding displayName items to lawlist
for j in range(i):
item = QListWidgetItem(displaynamelist[j])
self.lawlist.addItem(item)
self.lawdetailpage = QWidget()
# Page layout will become its own function
setup_group = QGroupBox(displaynamelist[j])
infixmod = infixlist[j].replace("___"," ")
setup_label = QLabel(infixmod)
setup_label.setWordWrap(True)
desc_group = QGroupBox("Description")
desc_label = QLabel(desclist[j])
desc_label.setWordWrap(True)
param_label = QLabel(parameterstringlist[j])
param_label.setWordWrap(True)
# Warning: do not try to regroup the following QLabel contents with
# widgets above -- this string was isolated here in a single QLabel
# on purpose: to fix Issue 863
setup_layout = QVBoxLayout()
setup_layout.addWidget(setup_label)
setup_group.setLayout(setup_layout)
desc_layout = QVBoxLayout()
desc_layout.addWidget(desc_label)
desc_layout.addWidget(param_label)
desc_group.setLayout(desc_layout)
vlayout = QVBoxLayout()
vlayout.addWidget(setup_group)
vlayout.addWidget(desc_group)
vlayout.addStretch(1)
self.lawdetailpage.setLayout(vlayout)
self.lawpage.addWidget(self.lawdetailpage)
#self.connect(self.lawlist, SIGNAL(self.lawlist.currentRowChanged(int)),self.lawpage,SLOT(self.lawpage.setCurrentIndex(int)))
self.lawlist.currentRowChanged.connect(self.lawpage.setCurrentIndex)
'''
self.lawpage = QWidget()
'''
self.lawlist.setCurrentRow(0)
hsplitter = QSplitter()
hsplitter.addWidget(self.lawlist)
hlayout1 = QHBoxLayout()
hlayout1.addWidget(self.textlabel)
hlayout1.addStretch()
self.lawpage.setLayout(hlayout1)
hsplitter.addWidget(self.lawpage)
layout = QVBoxLayout()
layout.addWidget(hsplitter)
self.setLayout(layout)
class PathManager(QDialog):
redirect_stdio = Signal(bool)
def __init__(self, parent=None, pathlist=None, ro_pathlist=None, sync=True):
QDialog.__init__(self, parent)
# Destroying the C++ object right after closing the dialog box,
# otherwise it may be garbage-collected in another QThread
# (e.g. the editor's analysis thread in Spyder), thus leading to
# a segmentation fault on UNIX or an application crash on Windows
self.setAttribute(Qt.WA_DeleteOnClose)
assert isinstance(pathlist, list)
self.pathlist = pathlist
if ro_pathlist is None:
ro_pathlist = []
self.ro_pathlist = ro_pathlist
self.last_path = getcwd()
self.setWindowTitle(_("PYTHONPATH manager"))
self.setWindowIcon(get_icon('pythonpath.png'))
self.resize(500, 300)
self.selection_widgets = []
layout = QVBoxLayout()
self.setLayout(layout)
top_layout = QHBoxLayout()
layout.addLayout(top_layout)
self.toolbar_widgets1 = self.setup_top_toolbar(top_layout)
self.listwidget = QListWidget(self)
self.listwidget.currentRowChanged.connect(self.refresh)
layout.addWidget(self.listwidget)
bottom_layout = QHBoxLayout()
layout.addLayout(bottom_layout)
self.sync_button = None
self.toolbar_widgets2 = self.setup_bottom_toolbar(bottom_layout, sync)
# Buttons configuration
bbox = QDialogButtonBox(QDialogButtonBox.Close)
bbox.rejected.connect(self.reject)
bottom_layout.addWidget(bbox)
self.update_list()
self.refresh()
def _add_widgets_to_layout(self, layout, widgets):
layout.setAlignment(Qt.AlignLeft)
for widget in widgets:
layout.addWidget(widget)
def setup_top_toolbar(self, layout):
toolbar = []
movetop_button = create_toolbutton(self,
text=_("Move to top"),
icon=get_icon('2uparrow.png'),
triggered=lambda: self.move_to(absolute=0),
text_beside_icon=True)
toolbar.append(movetop_button)
moveup_button = create_toolbutton(self,
text=_("Move up"),
icon=get_icon('1uparrow.png'),
triggered=lambda: self.move_to(relative=-1),
text_beside_icon=True)
toolbar.append(moveup_button)
movedown_button = create_toolbutton(self,
text=_("Move down"),
icon=get_icon('1downarrow.png'),
triggered=lambda: self.move_to(relative=1),
text_beside_icon=True)
toolbar.append(movedown_button)
movebottom_button = create_toolbutton(self,
text=_("Move to bottom"),
icon=get_icon('2downarrow.png'),
triggered=lambda: self.move_to(absolute=1),
text_beside_icon=True)
toolbar.append(movebottom_button)
self.selection_widgets.extend(toolbar)
self._add_widgets_to_layout(layout, toolbar)
return toolbar
def setup_bottom_toolbar(self, layout, sync=True):
toolbar = []
add_button = create_toolbutton(self, text=_("Add path"),
icon=get_icon('edit_add.png'),
triggered=self.add_path,
text_beside_icon=True)
toolbar.append(add_button)
remove_button = create_toolbutton(self, text=_("Remove path"),
icon=get_icon('edit_remove.png'),
triggered=self.remove_path,
text_beside_icon=True)
toolbar.append(remove_button)
self.selection_widgets.append(remove_button)
self._add_widgets_to_layout(layout, toolbar)
layout.addStretch(1)
if os.name == 'nt' and sync:
self.sync_button = create_toolbutton(self,
text=_("Synchronize..."),
icon=get_icon('synchronize.png'), triggered=self.synchronize,
tip=_("Synchronize Spyder's path list with PYTHONPATH "
"environment variable"),
text_beside_icon=True)
layout.addWidget(self.sync_button)
return toolbar
@Slot()
def synchronize(self):
"""
Synchronize Spyder's path list with PYTHONPATH environment variable
Only apply to: current user, on Windows platforms
"""
answer = QMessageBox.question(self, _("Synchronize"),
_("This will synchronize Spyder's path list with "
"<b>PYTHONPATH</b> environment variable for current user, "
"allowing you to run your Python modules outside Spyder "
"without having to configure sys.path. "
"<br>Do you want to clear contents of PYTHONPATH before "
"adding Spyder's path list?"),
QMessageBox.Yes | QMessageBox.No | QMessageBox.Cancel)
if answer == QMessageBox.Cancel:
return
elif answer == QMessageBox.Yes:
remove = True
else:
remove = False
from spyderlib.utils.environ import (get_user_env, set_user_env,
listdict2envdict)
env = get_user_env()
if remove:
ppath = self.pathlist+self.ro_pathlist
else:
ppath = env.get('PYTHONPATH', [])
if not isinstance(ppath, list):
ppath = [ppath]
ppath = [path for path in ppath
if path not in (self.pathlist+self.ro_pathlist)]
ppath.extend(self.pathlist+self.ro_pathlist)
env['PYTHONPATH'] = ppath
set_user_env( listdict2envdict(env), parent=self )
def get_path_list(self):
"""Return path list (does not include the read-only path list)"""
return self.pathlist
def update_list(self):
"""Update path list"""
self.listwidget.clear()
for name in self.pathlist+self.ro_pathlist:
item = QListWidgetItem(name)
item.setIcon(get_std_icon('DirClosedIcon'))
if name in self.ro_pathlist:
item.setFlags(Qt.NoItemFlags)
self.listwidget.addItem(item)
self.refresh()
def refresh(self, row=None):
"""Refresh widget"""
for widget in self.selection_widgets:
widget.setEnabled(self.listwidget.currentItem() is not None)
not_empty = self.listwidget.count() > 0
if self.sync_button is not None:
self.sync_button.setEnabled(not_empty)
def move_to(self, absolute=None, relative=None):
index = self.listwidget.currentRow()
if absolute is not None:
if absolute:
new_index = len(self.pathlist)-1
else:
new_index = 0
else:
new_index = index + relative
new_index = max(0, min(len(self.pathlist)-1, new_index))
path = self.pathlist.pop(index)
self.pathlist.insert(new_index, path)
self.update_list()
self.listwidget.setCurrentRow(new_index)
@Slot()
def remove_path(self):
answer = QMessageBox.warning(self, _("Remove path"),
_("Do you really want to remove selected path?"),
QMessageBox.Yes | QMessageBox.No)
if answer == QMessageBox.Yes:
self.pathlist.pop(self.listwidget.currentRow())
self.update_list()
@Slot()
def add_path(self):
self.redirect_stdio.emit(False)
directory = getexistingdirectory(self, _("Select directory"),
self.last_path)
self.redirect_stdio.emit(True)
if directory:
directory = osp.abspath(directory)
self.last_path = directory
if directory in self.pathlist:
answer = QMessageBox.question(self, _("Add path"),
_("This directory is already included in Spyder path "
"list.<br>Do you want to move it to the top of "
"the list?"),
QMessageBox.Yes | QMessageBox.No)
if answer == QMessageBox.Yes:
self.pathlist.remove(directory)
else:
return
self.pathlist.insert(0, directory)
self.update_list()
class RateLawWidget(QWidget):
"""
Rate Law widget
"""
def __init__(self, parent, max_entries=100):
""" Creates a very basic window with some text """
"""
RATE_LAW_MESSAGE = \
"The Plugins for Spyder consists out of three main classes: \n\n" \
"1. HelloWorld\n\n" \
"\tThe HelloWorld class inherits all its methods from\n" \
"\tSpyderPluginMixin and the HelloWorldWidget and performs all\n" \
"\tthe processing required by the GU. \n\n" \
"2. HelloWorldConfigPage\n\n" \
"\tThe HelloWorldConfig class inherits all its methods from\n" \
"\tPluginConfigPage to create a configuration page that can be\n" \
"\tfound under Tools -> Preferences\n\n" \
"3. HelloWorldWidget\n\n" \
"\tThe HelloWorldWidget class inherits all its methods from\n" \
"\tQWidget to create the actual plugin GUI interface that \n" \
"\tdisplays this message on screen\n\n"
"""
#Testing access editor on plugin initialization
RATE_LAW_MESSAGE = ""
displaynamelist = []
#displaylist = []
infixlist = []
desclist = []
parameterstringlist = []
xmldoc = minidom.parse('\\.spyder2\\ratelaw2_0_3.xml')
#xmldoc = minidom.parse('%\\Downloads\\ratelaw2_0_3.xml')
lawlistxml = xmldoc.getElementsByTagName('law')
#i is the number of laws currently in the xml file
i = 0
"""
Parsing xml: Acquiring rate law name, description, and list of parameter information
"""
for s in lawlistxml:
#RATE_LAW_MESSAGE += s.getAttribute('displayName') + "\n"
RATE_LAW_MESSAGE += s.getAttribute('display') + "\n"
#displaynamelist[i] = s.getAttribute('displayName')
#displaylist[i] = s.getAttribute('display')
displaynamelist.append(s.getAttribute('displayName'))
#displaylist.append(s.getAttribute('display'))
infixlist.append(s.getAttribute('infixExpression'))
desclist.append(s.getAttribute('description'))
parameterlist = s.getElementsByTagName('listOfParameters')[0]
#for p in parameterlist
parameters = parameterlist.getElementsByTagName('parameter')
parameterstring = ""
for param in parameters:
parametername = param.attributes['name'].value
parameterdesc = param.attributes['description'].value
parameterstring = parameterstring + '\t' + parametername + ":" + '\t' + " " + parameterdesc + "\n"
"""Creates "description" string"""
#print('\t' + parametername + ":" + '\t' + parameterdesc)
parameterstringlist.append(parameterstring)
i = i + 1
QWidget.__init__(self, parent)
self.setWindowTitle("Rate Law Library")
self.output = None
self.error_output = None
self._last_wdir = None
self._last_args = None
self._last_pythonpath = None
self.textlabel = QLabel(RATE_LAW_MESSAGE)
self.lawlist = QListWidget()
self.lawpage = QStackedWidget()
#Adding displayName items to lawlist
for j in range(i):
item = QListWidgetItem(displaynamelist[j]) """Creates list entry for each rate law"""
self.lawlist.addItem(item) """Adds rate law to list"""
self.lawdetailpage = QWidget() """Creates page for each rate law"""
# Page layout will become its own function
setup_group = QGroupBox(displaynamelist[j]) """Creates box with rate law name as title"""
infixmod = infixlist[j].replace("___"," ")
setup_label = QLabel(infixmod)
setup_label.setWordWrap(True) """types rate law expression, removing underscores"""
desc_group = QGroupBox("Description") """creates box for description"""
desc_label = QLabel(desclist[j])
desc_label.setWordWrap(True)
param_label = QLabel(parameterstringlist[j])
param_label.setWordWrap(True)
# Warning: do not try to regroup the following QLabel contents with
# widgets above -- this string was isolated here in a single QLabel
# on purpose: to fix Issue 863
setup_layout = QVBoxLayout()
setup_layout.addWidget(setup_label)
setup_group.setLayout(setup_layout)
desc_layout = QVBoxLayout()
desc_layout.addWidget(desc_label)
desc_layout.addWidget(param_label)
desc_group.setLayout(desc_layout)
vlayout = QVBoxLayout()
vlayout.addWidget(setup_group)
vlayout.addWidget(desc_group)
vlayout.addStretch(1)
self.lawdetailpage.setLayout(vlayout)
self.lawpage.addWidget(self.lawdetailpage) """Formats the page shown when a rate law is selected"""
#self.connect(self.lawlist, SIGNAL(self.lawlist.currentRowChanged(int)),self.lawpage,SLOT(self.lawpage.setCurrentIndex(int)))
self.lawlist.currentRowChanged.connect(self.lawpage.setCurrentIndex) """When a rate law in the list is clicked, its corresponding page is shown"""
'''
self.lawpage = QWidget()
'''
self.lawlist.setCurrentRow(0)
hsplitter = QSplitter()
hsplitter.addWidget(self.lawlist) "Adds list to left side of window"
hlayout1 = QHBoxLayout()
hlayout1.addWidget(self.textlabel)
hlayout1.addStretch()
self.lawpage.setLayout(hlayout1)
hsplitter.addWidget(self.lawpage) """Adds law page to left side of window"""
layout = QVBoxLayout()
layout.addWidget(hsplitter)
self.setLayout(layout)
class RateLawWidget(QWidget):
"""
Rate Law widget
"""
def __init__(self, parent, max_entries=100):
"Initialize Various list objects before assignment"
displaylist = []
displaynamelist = []
infixmod = []
infixlist = []
desclist = []
parameternamelist = []
parameterdesclist = []
parameterstringlist = []
paramcountlist = []
buttonlist = []
xmldoc = minidom.parse('C:\\Users\\Jayit\\.spyder2\\ratelaw2_0_3.xml')
#xmldoc = minidom.parse('%\\Downloads\\ratelaw2_0_3.xml')
lawlistxml = xmldoc.getElementsByTagName('law')
o = 0
for s in lawlistxml:
o = o + 1
parameternamelistlist = [0 for x in range(o)]
parameterdesclistlist = [0 for x in range(o)]
"""i is the number of laws currently in the xml file"""
i = 0
"""
Parsing xml: Acquiring rate law name, description, and list of parameter information
"""
for s in lawlistxml:
#RATE_LAW_MESSAGE += s.getAttribute('displayName') + "\n"
"""Gets Latec Expression"""
displaylist.append(s.getAttribute('display'))
"""Gets Rate-Law Name"""
displaynamelist.append(s.getAttribute('displayName'))
""""Gets Raw Rate-Law expression"""
infixlist.append(s.getAttribute('infixExpression'))
"""Gets description statement"""
desclist.append(s.getAttribute('description'))
"""Gets listOfParameters Object"""
parameterlist = s.getElementsByTagName('listOfParameters')[0]
"""Gets a list of parameters within ListOfParameters object"""
parameters = parameterlist.getElementsByTagName('parameter')
for param in parameters:
parameternamelist.append(param.attributes['name'].value)
#print(param.attributes['name'].value)
parameterdesclist.append(param.attributes['description'].value)
parameternamelistlist[i] = parameternamelist
#print("break")
parameterdesclistlist[i] = parameterdesclist
parameternamelist = []
parameterdesclist = []
i = i + 1
SLElistlist = [ 0 for x in range(i)]
PLElistlist = [ 0 for x in range(i)]
ILElistlist = [ 0 for x in range(i)]
paramLElistlist = [ 0 for x in range(i)]
numlistlist = [ 0 for x in range(i)]
QWidget.__init__(self, parent)
self.setWindowTitle("Rate Law Library")
self.output = None
self.error_output = None
self._last_wdir = None
self._last_args = None
self._last_pythonpath = None
#self.textlabel = QLabel(RATE_LAW_MESSAGE)
self.lawlist = QListWidget()
self.lawpage = QStackedWidget()
index = 0
for j in range(i):
item = QListWidgetItem(displaynamelist[j])
self.lawlist.addItem(item)
self.lawdetailpage = QWidget()
setup_group = QGroupBox(displaynamelist[j])
infixmod.append(infixlist[j].replace("___"," "))
setup_label = QLabel(infixmod[j])
setup_label.setWordWrap(True)
desc_group = QGroupBox("Description")
desc_label = QLabel(desclist[j])
desc_label.setWordWrap(True)
param_label = QGridLayout()
nm = QLabel("Name:")
des = QLabel("Description:")
repl = QLabel("Replace with:")
param_label.addWidget(nm,0,0)
param_label.addWidget(des,0,1)
param_label.addWidget(repl,0,2)
"""g is the total number of alterable values"""
g = 0
"""t is the total number of alterable non-parameters"""
t = 1
snum = 0
pnum = 0
inum = 0
"""range of N is the max number of possible substrates OR products"""
N = 5
for n in range(N):
nl = n+1
if (infixmod[j].find('S%s' % nl) > -1):
z = QLabel('S%s is present' % nl)
param_label.addWidget(z,t,0)
snum = snum + 1
t = t + 1
for n in range(N):
nl = n+1
if (infixmod[j].find('P%s' % nl) > -1):
z = QLabel('P%s is present' % nl)
param_label.addWidget(z,t,0)
pnum = pnum + 1
t = t + 1
for n in range(N):
nl = n+1
if (infixmod[j].find('I%s' % nl) > -1):
z = QLabel('I%s is present' % nl)
param_label.addWidget(z,t,0)
inum = inum + 1
t = t + 1
"""Initialize lists of list of parameter lineedit"""
length = len(parameternamelistlist[j])
for b in range(length):
p = QLabel("%s :" % parameternamelistlist[j][b])
param_label.addWidget(p,b+t,0)
d = QLabel("'%s'" % parameterdesclistlist[j][b])
param_label.addWidget(d,b+t,1)
g = t + length
Slineeditlist = [0 for x in range(snum)]
Plineeditlist = [0 for x in range(pnum)]
Ilineeditlist = [0 for x in range(inum)]
paramlineeditlist = [0 for x in range(length)]
editcount = 1
"""Place lineedit widgets for parameters"""
for s in range(snum):
Slineeditlist[s] = QLineEdit()
param_label.addWidget(Slineeditlist[s],editcount,2)
editcount = editcount + 1
SLElistlist[j] = Slineeditlist
for s in range(pnum):
Plineeditlist[s] = QLineEdit()
param_label.addWidget(Plineeditlist[s],editcount,2)
editcount = editcount + 1
PLElistlist[j] = Plineeditlist
for s in range(inum):
Ilineeditlist[s] = QLineEdit()
param_label.addWidget(Ilineeditlist[s],editcount,2)
editcount = editcount + 1
ILElistlist[j] = Ilineeditlist
for s in range(length):
paramlineeditlist[s] = QLineEdit()
param_label.addWidget(paramlineeditlist[s],editcount,2)
editcount = editcount + 1
paramLElistlist[j] = paramlineeditlist
"""Necessary lists for editable parameters. Housekeeping essentially."""
stuff = paramlineeditlist[0].text()
numlistlist[j] = [snum, pnum, inum, length]
charlist = ["S","P","I"]
buttonlist.append(QPushButton(self))
buttonlist[j].setText("Insert Rate Law: %s" % displaynamelist[j])
# Warning: do not try to regroup the following QLabel contents with
# widgets above -- this string was isolated here in a single QLabel
# on purpose: to fix Issue 863
"""Page formatting"""
setup_layout = QVBoxLayout()
setup_layout.addWidget(setup_label)
setup_group.setLayout(setup_layout)
desc_group.setLayout(param_label)
vlayout = QVBoxLayout()
vlayout.addWidget(setup_group)
vlayout.addWidget(desc_group)
vlayout.addWidget(buttonlist[j])
vlayout.addStretch(1)
self.lawdetailpage.setLayout(vlayout)
self.lawpage.addWidget(self.lawdetailpage)
"""Set up button functionality"""
for k in range(47):
buttonlist[k].clicked.connect(pressbutton(self, infixmod[k], SLElistlist[k], PLElistlist[k],ILElistlist[k], paramLElistlist[k], parameternamelistlist[k], numlistlist[k], charlist,k))
self.lawlist.currentRowChanged.connect(self.lawpage.setCurrentIndex)
self.lawlist.setCurrentRow(0)
"""Set up high-level widget formatting."""
hsplitter = QSplitter()
hsplitter.addWidget(self.lawlist)
hsplitter.addWidget(self.lawpage)
layout = QVBoxLayout()
layout.addWidget(hsplitter)
self.setLayout(layout)
class RateLawWidget(QWidget):
"""
Rate Law widget
"""
def __init__(self, parent, max_entries=100):
"Initialize Various list objects before assignment"
displaylist = []
displaynamelist = []
infixmod = []
infixlist = []
desclist = []
parameternamelist = []
parameterdesclist = []
parameterstringlist = []
paramcountlist = []
buttonlist = []
xmldoc = minidom.parse('C:\\Users\\Jayit\\.spyder2\\ratelaw2_0_3.xml')
#xmldoc = minidom.parse('%\\Downloads\\ratelaw2_0_3.xml')
lawlistxml = xmldoc.getElementsByTagName('law')
o = 0
for s in lawlistxml:
o = o + 1
parameternamelistlist = [0 for x in range(o)]
parameterdesclistlist = [0 for x in range(o)]
"""i is the number of laws currently in the xml file"""
i = 0
"""
Parsing xml: Acquiring rate law name, description, and list of parameter information
"""
for s in lawlistxml:
#RATE_LAW_MESSAGE += s.getAttribute('displayName') + "\n"
"""Gets Latec Expression"""
displaylist.append(s.getAttribute('display'))
"""Gets Rate-Law Name"""
displaynamelist.append(s.getAttribute('displayName'))
""""Gets Raw Rate-Law expression"""
infixlist.append(s.getAttribute('infixExpression'))
"""Gets description statement"""
desclist.append(s.getAttribute('description'))
"""Gets listOfParameters Object"""
parameterlist = s.getElementsByTagName('listOfParameters')[0]
"""Gets a list of parameters within ListOfParameters object"""
parameters = parameterlist.getElementsByTagName('parameter')
for param in parameters:
parameternamelist.append(param.attributes['name'].value)
#print(param.attributes['name'].value)
parameterdesclist.append(param.attributes['description'].value)
parameternamelistlist[i] = parameternamelist
#print("break")
parameterdesclistlist[i] = parameterdesclist
parameternamelist = []
parameterdesclist = []
i = i + 1
SLElistlist = [0 for x in range(i)]
PLElistlist = [0 for x in range(i)]
ILElistlist = [0 for x in range(i)]
paramLElistlist = [0 for x in range(i)]
numlistlist = [0 for x in range(i)]
QWidget.__init__(self, parent)
self.setWindowTitle("Rate Law Library")
self.output = None
self.error_output = None
self._last_wdir = None
self._last_args = None
self._last_pythonpath = None
#self.textlabel = QLabel(RATE_LAW_MESSAGE)
self.lawlist = QListWidget()
self.lawpage = QStackedWidget()
index = 0
for j in range(i):
item = QListWidgetItem(displaynamelist[j])
self.lawlist.addItem(item)
self.lawdetailpage = QWidget()
setup_group = QGroupBox(displaynamelist[j])
infixmod.append(infixlist[j].replace("___", " "))
setup_label = QLabel(infixmod[j])
setup_label.setWordWrap(True)
desc_group = QGroupBox("Description")
desc_label = QLabel(desclist[j])
desc_label.setWordWrap(True)
param_label = QGridLayout()
nm = QLabel("Name:")
des = QLabel("Description:")
repl = QLabel("Replace with:")
param_label.addWidget(nm, 0, 0)
param_label.addWidget(des, 0, 1)
param_label.addWidget(repl, 0, 2)
"""g is the total number of alterable values"""
g = 0
"""t is the total number of alterable non-parameters"""
t = 1
snum = 0
pnum = 0
inum = 0
"""range of N is the max number of possible substrates OR products"""
N = 5
for n in range(N):
nl = n + 1
if (infixmod[j].find('S%s' % nl) > -1):
z = QLabel('S%s is present' % nl)
param_label.addWidget(z, t, 0)
snum = snum + 1
t = t + 1
for n in range(N):
nl = n + 1
if (infixmod[j].find('P%s' % nl) > -1):
z = QLabel('P%s is present' % nl)
param_label.addWidget(z, t, 0)
pnum = pnum + 1
t = t + 1
for n in range(N):
nl = n + 1
if (infixmod[j].find('I%s' % nl) > -1):
z = QLabel('I%s is present' % nl)
param_label.addWidget(z, t, 0)
inum = inum + 1
t = t + 1
"""Initialize lists of list of parameter lineedit"""
length = len(parameternamelistlist[j])
for b in range(length):
p = QLabel("%s :" % parameternamelistlist[j][b])
param_label.addWidget(p, b + t, 0)
d = QLabel("'%s'" % parameterdesclistlist[j][b])
param_label.addWidget(d, b + t, 1)
g = t + length
Slineeditlist = [0 for x in range(snum)]
Plineeditlist = [0 for x in range(pnum)]
Ilineeditlist = [0 for x in range(inum)]
paramlineeditlist = [0 for x in range(length)]
editcount = 1
"""Place lineedit widgets for parameters"""
for s in range(snum):
Slineeditlist[s] = QLineEdit()
param_label.addWidget(Slineeditlist[s], editcount, 2)
editcount = editcount + 1
SLElistlist[j] = Slineeditlist
for s in range(pnum):
Plineeditlist[s] = QLineEdit()
param_label.addWidget(Plineeditlist[s], editcount, 2)
editcount = editcount + 1
PLElistlist[j] = Plineeditlist
for s in range(inum):
Ilineeditlist[s] = QLineEdit()
param_label.addWidget(Ilineeditlist[s], editcount, 2)
editcount = editcount + 1
ILElistlist[j] = Ilineeditlist
for s in range(length):
paramlineeditlist[s] = QLineEdit()
param_label.addWidget(paramlineeditlist[s], editcount, 2)
editcount = editcount + 1
paramLElistlist[j] = paramlineeditlist
"""Necessary lists for editable parameters. Housekeeping essentially."""
stuff = paramlineeditlist[0].text()
numlistlist[j] = [snum, pnum, inum, length]
charlist = ["S", "P", "I"]
buttonlist.append(QPushButton(self))
buttonlist[j].setText("Insert Rate Law: %s" % displaynamelist[j])
# Warning: do not try to regroup the following QLabel contents with
# widgets above -- this string was isolated here in a single QLabel
# on purpose: to fix Issue 863
"""Page formatting"""
setup_layout = QVBoxLayout()
setup_layout.addWidget(setup_label)
setup_group.setLayout(setup_layout)
desc_group.setLayout(param_label)
vlayout = QVBoxLayout()
vlayout.addWidget(setup_group)
vlayout.addWidget(desc_group)
vlayout.addWidget(buttonlist[j])
vlayout.addStretch(1)
self.lawdetailpage.setLayout(vlayout)
self.lawpage.addWidget(self.lawdetailpage)
"""Set up button functionality"""
for k in range(47):
buttonlist[k].clicked.connect(
pressbutton(self, infixmod[k], SLElistlist[k], PLElistlist[k],
ILElistlist[k], paramLElistlist[k],
parameternamelistlist[k], numlistlist[k], charlist,
k))
self.lawlist.currentRowChanged.connect(self.lawpage.setCurrentIndex)
self.lawlist.setCurrentRow(0)
"""Set up high-level widget formatting."""
hsplitter = QSplitter()
hsplitter.addWidget(self.lawlist)
hsplitter.addWidget(self.lawpage)
layout = QVBoxLayout()
layout.addWidget(hsplitter)
self.setLayout(layout)
