def read_args(argv=None):
parser = su.add_default_args()
parser.add_argument('--python_cmd',
help='python cmd',
required=False,
default=sys.executable)
return su.Bag(au.parse_parser(parser, argv))
def render_image(subject,
atlas,
image_name,
output_path,
quality=60,
inflated=False,
inflated_ratio=1,
background_color='black',
lighting=1.0,
smooth_figure=False,
hide_lh=False,
hide_rh=False,
hide_subs=False,
show_elecs=False,
bipolar=False,
show_only_lead=False,
curr_elec='',
show_connections=False,
filter_nodes=True,
interactive=True,
blender_fol='',
subjects=''):
image_name = [image_name] if isinstance(image_name, str) else image_name
camera = [
op.join(
su.get_mmvt_dir(), subject, 'camera',
'camera_{}{}.pkl'.format(camera_name, '_inf' if inflated else ''))
for camera_name in image_name
]
image_name = [
'{}_{}_{}'.format(
name, 'inflated_{}'.format(inflated_ratio) if inflated else 'pial',
background_color) for name in image_name
]
camera = ','.join(camera)
image_name = ','.join(image_name)
args = su.Bag(locals())
su.call_script(__file__, args)