#!/usr/bin/python
import json
import sys
import os
import simplejson
import re
sys.path.append(os.path.abspath(os.path.join(os.path.dirname("__file__"), '../modules')))
from storage import data2store, readdata, readdataset, readdatasets, datasetadd, formdatasetquery
from sys import argv
script, filename, handle, title = argv
handles = []
handlequery = ''
if filename:
print filename
pid = re.search('\/(\w+)', handle)
if pid:
dataset = pid.group(1)
#handle = "hdl:10622/" + dataset
datasetadd(filename, handle, dataset, title)
print handle
print dataset
#!/usr/bin/python
import json
import sys
import os
import simplejson
import re
sys.path.append(
os.path.abspath(os.path.join(os.path.dirname("__file__"), '../modules')))
from storage import data2store, readdata, readdataset, readdatasets, datasetadd, formdatasetquery
from sys import argv
script, filename, handle, title = argv
handles = []
handlequery = ''
if filename:
print filename
pid = re.search('\/(\w+)', handle)
if pid:
dataset = pid.group(1)
#handle = "hdl:10622/" + dataset
datasetadd(filename, handle, dataset, title)
print handle
print dataset
def main():
handle = ''
dataverse = ''
customkey = ''
config = configuration()
try:
myopts, args = getopt.getopt(sys.argv[1:], "H:r:d:k:D:")
except getopt.GetoptError as e:
print(str(e))
print(
"Usage: %s -y year -d datatype -r region -f filename -DDEBUG -o output"
% sys.argv[0])
sys.exit(2)
(handle, rhandle, customdv) = ('', '', '')
for o, a in myopts:
if o == '-H':
handle = a
if o == '-r':
rhandle = a
if o == '-d':
dataverse = a
if o == '-k':
customkey = a
if o == '-D':
customdv = a
dataset = {}
DEBUG = ''
path = config['path']
# Default dataverse
root = config['dataverseroot']
key = config['key']
dvname = config['branch']
title = 'Title'
units = 'Units'
if dataverse:
root = dataverse
if customkey:
key = customkey
if customdv:
dvname = customdv
files = []
if rhandle:
contentsapi = root + "/api/dataverses/" + dvname + "/contents?key=" + key
print contentsapi
newdata = load_api_data(contentsapi, '')
metadata = newdata['data']
for item in metadata:
dv = item['id']
files = getfiles(root, dv, key)
if handle:
print handle
(datahandle, datasetID, fileID) = parsehandle(handle)
files.append(fileID)
for fileID in files:
fullpath = downloadfile(root, path, fileID, key)
print fullpath
(pid, revid, cliohandle, clearpid) = findpid(handle)
(jsonfile, csvfile) = ('', '')
#try:
if pid:
handle = pid
try:
(jsonfile, csvfile, tmptitle,
tmpunits) = dataextractor(fullpath, path, pid, fileID)
except:
resultfile = config['tmpdir'] + "/" + fileID
(jsonfile, csvfile, tmptitle,
tmpunits) = excelvalidator(config['phantompath'], fullpath,
resultfile, config['tmpdir'])
if jsonfile:
remove = removedata('datasets', 'handle', clearpid)
try:
title = str(tmptitle)
units = str(tmpunits)
except:
donothing = 1
print "ADD " + str(jsonfile)
datasetadd(jsonfile, csvfile, clearpid, handle, title, units,
datasetID)
print handle
print clearpid
print datasetID
def main():
handle = ''
dataverse = ''
customkey = ''
config = configuration()
try:
myopts, args = getopt.getopt(sys.argv[1:], "H:r:d:k:D:")
except getopt.GetoptError as e:
print(str(e))
print(
"Usage: %s -y year -d datatype -r region -f filename -DDEBUG -o output"
% sys.argv[0])
sys.exit(2)
(handle, rhandle, customdv) = ('', '', '')
for o, a in myopts:
if o == '-H':
handle = a
if o == '-r':
rhandle = a
if o == '-d':
dataverse = a
if o == '-k':
customkey = a
if o == '-D':
customdv = a
dataset = {}
DEBUG = ''
path = config['path']
# Default dataverse
root = config['dataverseroot']
key = config['key']
dvname = config['branch']
if dataverse:
root = dataverse
if customkey:
key = customkey
if customdv:
dvname = customdv
files = []
if rhandle:
contentsapi = root + "/api/dataverses/" + dvname + "/contents?key=" + key
print contentsapi
newdata = load_api_data(contentsapi, '')
metadata = newdata['data']
for item in metadata:
dv = item['id']
files = getfiles(root, dv, key)
if handle:
print handle
(datahandle, datasetID, fileID) = parsehandle(handle)
files.append(fileID)
for fileID in files:
fullpath = downloadfile(root, path, fileID, key)
print fullpath
(pid, revid, cliohandle, clearpid) = findpid(handle)
#try:
if pid:
handle = pid
jsonfile = dataextractor(fullpath, path, pid, fileID)
if jsonfile:
title = 'Test'
datasetadd(jsonfile, clearpid, handle, title)
print handle
print clearpid
def main():
handle = ''
dataverse = ''
customkey = ''
config = configuration()
try:
myopts, args = getopt.getopt(sys.argv[1:],"H:r:d:k:D:")
except getopt.GetoptError as e:
print (str(e))
print("Usage: %s -y year -d datatype -r region -f filename -DDEBUG -o output" % sys.argv[0])
sys.exit(2)
(handle, rhandle, customdv) = ('', '', '')
for o, a in myopts:
if o == '-H':
handle=a
if o == '-r':
rhandle=a
if o == '-d':
dataverse=a
if o == '-k':
customkey=a
if o == '-D':
customdv=a
dataset = {}
DEBUG = ''
path = config['path']
# Default dataverse
root = config['dataverseroot']
key = config['key']
dvname = config['branch']
title = 'Title'
units = 'Units'
if dataverse:
root = dataverse
if customkey:
key = customkey
if customdv:
dvname = customdv
files = []
if rhandle:
contentsapi = root + "/api/dataverses/" + dvname +"/contents?key=" + key
print contentsapi
newdata = load_api_data(contentsapi, '')
metadata = newdata['data']
for item in metadata:
dv = item['id']
files = getfiles(root, dv, key)
if handle:
print handle
(datahandle, datasetID, fileID) = parsehandle(handle)
files.append(fileID)
for fileID in files:
fullpath = downloadfile(root, path, fileID, key)
print fullpath
(pid, revid, cliohandle, clearpid) = findpid(handle)
(jsonfile, csvfile) =('', '')
#try:
if pid:
handle = pid
try:
(jsonfile, csvfile, tmptitle, tmpunits) = dataextractor(fullpath, path, pid, fileID)
except:
resultfile = config['tmpdir'] + "/" + fileID
(jsonfile, csvfile, tmptitle, tmpunits) = excelvalidator(config['phantompath'], fullpath, resultfile, config['tmpdir'])
if jsonfile:
remove = removedata('datasets', 'handle', clearpid)
try:
title = str(tmptitle)
units = str(tmpunits)
except:
donothing = 1
print "ADD " + str(jsonfile)
datasetadd(jsonfile, csvfile, clearpid, handle, title, units, datasetID)
print handle
print clearpid
print datasetID
