def get_sequencing_submission_data(tmp_holder, sequencing_list, applied_protocol, submission_property):
tmp, first, second, third = tmp_holder.split("<")
sequencing = sequencing_list[int(third) - 1]
if first == "I":
sequencing_submission_data = SubmissionData(
series=second,
applied_protocol_input=applied_protocol,
content_type=ContentType.objects.get_for_model(Sequencing),
object_id=sequencing.id,
)
if first == "O":
sequencing_submission_data = SubmissionData(
series=second,
applied_protocol_output=applied_protocol,
content_type=ContentType.objects.get_for_model(Sequencing),
object_id=sequencing.id,
)
sequencing_submission_data.save()
def get_toxoplasma_mutant_submission_data(tmp_holder, toxoplasma_mutant_list, applied_protocol, submission_property):
tmp, first, second, third = tmp_holder.split("<")
toxoplasma_mutant = toxoplasma_mutant_list[int(third) - 1]
if first == "I":
toxoplasma_mutant_submission_data = SubmissionData(
series=second,
applied_protocol_input=applied_protocol,
content_type=ContentType.objects.get_for_model(ToxoplasmaMutant),
object_id=toxoplasma_mutant.id,
)
if first == "O":
toxoplasma_mutant_submission_data = SubmissionData(
series=second,
applied_protocol_output=applied_protocol,
content_type=ContentType.objects.get_for_model(ToxoplasmaMutant),
object_id=toxoplasma_mutant.id,
)
toxoplasma_mutant_submission_data.save()
def get_microarray_submission_data(tmp_holder, microarray_list, applied_protocol, submission_property):
tmp, first, second, third = tmp_holder.split("<")
microarray = microarray_list[int(third) - 1]
if first == "I":
microarray_submission_data = SubmissionData(
series=second,
applied_protocol_input=applied_protocol,
content_type=ContentType.objects.get_for_model(MicroArray),
object_id=microarray.id,
)
if first == "O":
microarray_submission_data = SubmissionData(
series=second,
applied_protocol_output=applied_protocol,
content_type=ContentType.objects.get_for_model(MicroArray),
object_id=microarray.id,
)
microarray_submission_data.save()
def get_data_analysis_submission_data(tmp_holder, data_analysis_list, applied_protocol, submission_property):
tmp, first, second, third = tmp_holder.split("<")
data_analysis = data_analysis_list[int(third) - 1]
if first == "I":
data_analysis_submission_data = SubmissionData(
series=second,
applied_protocol_input=applied_protocol,
content_type=ContentType.objects.get_for_model(DataAnalysis),
object_id=data_analysis.id,
)
if first == "O":
data_analysis_submission_data = SubmissionData(
series=second,
applied_protocol_output=applied_protocol,
content_type=ContentType.objects.get_for_model(DataAnalysis),
object_id=data_analysis.id,
)
data_analysis_submission_data.save()
def get_antibody_submission_data(tmp_holder, antibody_list, applied_protocol, submission_property):
tmp, first, second, third = tmp_holder.split("<")
antibody = antibody_list[int(third) - 1]
if first == "I":
antibody_submission_data = SubmissionData(
series=second,
applied_protocol_input=applied_protocol,
content_type=ContentType.objects.get_for_model(Antibody),
object_id=antibody.id,
)
if first == "O":
antibody_submission_data = SubmissionData(
series=second,
applied_protocol_output=applied_protocol,
content_type=ContentType.objects.get_for_model(Antibody),
object_id=antibody.id,
)
antibody_submission_data.save()
def get_persistent_datafile_submission_data(
tmp_holder, persistent_datafile_list, applied_protocol, submission_property
):
tmp, first, second, third = tmp_holder.split("<")
persistent_datafile = persistent_datafile_list[int(third) - 1]
if first == "I":
persistent_datafile_submission_data = SubmissionData(
series=second,
applied_protocol_input=applied_protocol,
content_type=ContentType.objects.get_for_model(PersistentDataFile),
object_id=persistent_datafile.id,
)
if first == "O":
persistent_datafile_submission_data = SubmissionData(
series=second,
applied_protocol_output=applied_protocol,
content_type=ContentType.objects.get_for_model(PersistentDataFile),
object_id=persistent_datafile.id,
)
persistent_datafile_submission_data.save()
def get_experimental_factor_submission_data(
tmp_holder, experimental_factor_list, applied_protocol, submission_property
):
tmp, first, second, third = tmp_holder.split("<")
experimental_factor = experimental_factor_list[int(third) - 1]
if first == "I":
experimental_factor_submission_data = SubmissionData(
series=second,
applied_protocol_input=applied_protocol,
content_type=ContentType.objects.get_for_model(ExperimentalFactor),
object_id=experimental_factor.id,
)
if first == "O":
experimental_factor_submission_data = SubmissionData(
series=second,
applied_protocol_output=applied_protocol,
content_type=ContentType.objects.get_for_model(ExperimentalFactor),
object_id=experimental_factor.id,
)
experimental_factor_submission_data.save()
