def test_Entity():
# Test the basics of creating and accessing properties on an entity
for i in range(2):
e = Entity(name='Test object',
description='I hope this works',
annotations=dict(foo=123,
nerds=['chris', 'jen', 'janey'],
annotations='How confusing!'),
properties=dict(
annotations='/repo/v1/entity/syn1234/annotations',
md5='cdef636522577fc8fb2de4d95875b27c',
parentId='syn1234'),
concreteType='org.sagebionetworks.repo.model.Data')
# Should be able to create an Entity from an Entity
if i == 1:
e = Entity.create(e)
assert e.parentId == 'syn1234'
assert e['parentId'] == 'syn1234'
assert e.properties['parentId'] == 'syn1234'
assert e.properties.parentId == 'syn1234'
assert e.foo == 123
assert e['foo'] == 123
assert e.annotations['foo'] == 123
assert e.annotations.foo == 123
# Annotations is a bit funny, because there is a property call
# 'annotations', which will be masked by a member of the object
# called 'annotations'. Because annotations are open-ended, we
# might even have an annotations called 'annotations', which gets
# really confusing.
assert isinstance(e.annotations, collections.Mapping)
assert isinstance(e['annotations'], collections.Mapping)
assert e.properties[
'annotations'] == '/repo/v1/entity/syn1234/annotations'
assert e.properties.annotations == '/repo/v1/entity/syn1234/annotations'
assert e.annotations.annotations == 'How confusing!'
assert e.annotations['annotations'] == 'How confusing!'
assert e.nerds == ['chris', 'jen', 'janey']
assert all([
k in e for k in [
'name', 'description', 'foo', 'nerds', 'annotations', 'md5',
'parentId'
]
])
# Test modifying properties
e.description = 'Working, so far'
assert e['description'] == 'Working, so far'
e['description'] = 'Wiz-bang flapdoodle'
assert e.description == 'Wiz-bang flapdoodle'
# Test modifying annotations
e.foo = 999
assert e.annotations['foo'] == 999
e['foo'] = 12345
assert e.annotations.foo == 12345
# Test creating a new annotation
e['bar'] = 888
assert e.annotations['bar'] == 888
e['bat'] = 7788
assert e.annotations['bat'] == 7788
# Test replacing annotations object
e.annotations = {
'splat': 'a totally new set of annotations',
'foo': 456
}
assert e.foo == 456
assert e['foo'] == 456
assert isinstance(e.annotations, collections.Mapping)
assert isinstance(e['annotations'], collections.Mapping)
assert e.annotations.foo == 456
assert e.properties[
'annotations'] == '/repo/v1/entity/syn1234/annotations'
assert e.properties.annotations == '/repo/v1/entity/syn1234/annotations'
def test_Entity():
# Test the basics of creating and accessing properties on an entity
for i in range(2):
e = Entity(name='Test object',
description='I hope this works',
annotations=dict(foo=123,
nerds=['chris', 'jen', 'janey'],
annotations='How confusing!'),
properties=dict(
annotations='/repo/v1/entity/syn1234/annotations',
md5='cdef636522577fc8fb2de4d95875b27c',
parentId='syn1234'),
concreteType='org.sagebionetworks.repo.model.Data')
# Should be able to create an Entity from an Entity
if i == 1:
e = Entity.create(e)
assert_equals(e.parentId, 'syn1234')
assert_equals(e['parentId'], 'syn1234')
assert_equals(e.properties['parentId'], 'syn1234')
assert_equals(e.properties.parentId, 'syn1234')
assert_equals(e.foo, 123)
assert_equals(e['foo'], 123)
assert_equals(e.annotations['foo'], 123)
assert_equals(e.annotations.foo, 123)
assert_true(hasattr(e, 'parentId'))
assert_true(hasattr(e, 'foo'))
assert_false(hasattr(e, 'qwerqwer'))
# Annotations is a bit funny, because there is a property call
# 'annotations', which will be masked by a member of the object
# called 'annotations'. Because annotations are open-ended, we
# might even have an annotations called 'annotations', which gets
# really confusing.
assert_is_instance(e.annotations, collections.Mapping)
assert_is_instance(e['annotations'], collections.Mapping)
assert_equals(e.properties['annotations'],
'/repo/v1/entity/syn1234/annotations')
assert_equals(e.properties.annotations,
'/repo/v1/entity/syn1234/annotations')
assert_equals(e.annotations.annotations, 'How confusing!')
assert_equals(e.annotations['annotations'], 'How confusing!')
assert_equals(e.nerds, ['chris', 'jen', 'janey'])
assert_true(
all([
k in e for k in [
'name', 'description', 'foo', 'nerds', 'annotations',
'md5', 'parentId'
]
]))
# Test modifying properties
e.description = 'Working, so far'
assert_equals(e['description'], 'Working, so far')
e['description'] = 'Wiz-bang flapdoodle'
assert_equals(e.description, 'Wiz-bang flapdoodle')
# Test modifying annotations
e.foo = 999
assert_equals(e.annotations['foo'], 999)
e['foo'] = 12345
assert_equals(e.annotations.foo, 12345)
# Test creating a new annotation
e['bar'] = 888
assert_equals(e.annotations['bar'], 888)
e['bat'] = 7788
assert_equals(e.annotations['bat'], 7788)
# Test replacing annotations object
e.annotations = {
'splat': 'a totally new set of annotations',
'foo': 456
}
assert_equals(e.foo, 456)
assert_equals(e['foo'], 456)
assert_is_instance(e.annotations, collections.Mapping)
assert_is_instance(e['annotations'], collections.Mapping)
assert_equals(e.annotations.foo, 456)
assert_equals(e.properties['annotations'],
'/repo/v1/entity/syn1234/annotations')
assert_equals(e.properties.annotations,
'/repo/v1/entity/syn1234/annotations')
# test unicode properties
e.train = '時刻表には記載されない 月への列車が来ると聞いて'
e.band = "Motörhead"
e.lunch = "すし"
