def z1_pre_encoder(x, z2, rhus=[256, 256]):
"""
Pre-stochastic layer encoder for z1 (latent segment variable)
Args:
x(tf.Tensor): tensor of shape (bs, T, F)
z2(tf.Tensor): tensor of shape (bs, D1)
rhus(list): list of numbers of LSTM layer hidden units
Return:
out(tf.Tensor): concatenation of hidden states of all LSTM layers
"""
bs, T = tf.shape(x)[0], tf.shape(x)[1]
z2 = tf.tile(tf.expand_dims(z2, 1), (1, T, 1))
x_z2 = tf.concat([x, z2], axis=-1)
cell = MultiRNNCell([BasicLSTMCell(rhu) for rhu in rhus])
init_state = cell.zero_state(bs, x.dtype)
name = "z1_enc_lstm_%s" % ("_".join(map(str, rhus)), )
_, final_state = dynamic_rnn(cell,
x_z2,
dtype=x.dtype,
initial_state=init_state,
time_major=False,
scope=name)
out = [l_final_state.h for l_final_state in final_state]
out = tf.concat(out, axis=-1)
return out
def decoder(z1, z2, x, rhus=[256, 256], x_mu_nl=None, x_logvar_nl=None):
"""
decoder
Args:
z1(tf.Tensor)
z2(tf.Tensor)
x(tf.Tensor): tensor of shape (bs, T, F). only shape is used
rhus(list)
"""
bs = tf.shape(x)[0]
z1_z2 = tf.concat([z1, z2], axis=-1)
cell = MultiRNNCell([BasicLSTMCell(rhu) for rhu in rhus])
state_t = cell.zero_state(bs, x.dtype)
name = "dec_lstm_%s_step" % ("_".join(map(str, rhus)), )
def cell_step(inp, prev_state):
return cell(inp, prev_state, scope=name)
gdim = x.get_shape().as_list()[2]
gname = "dec_gauss_step"
def glayer_step(inp):
return gauss_layer(inp, gdim, x_mu_nl, x_logvar_nl, gname)
out, x_mu, x_logvar, x_sample = [], [], [], []
for t in xrange(x.get_shape().as_list()[1]):
if t > 0:
tf.get_variable_scope().reuse_variables()
out_t, state_t, x_mu_t, x_logvar_t, x_sample_t = decoder_step(
z1_z2, state_t, cell_step, glayer_step)
out.append(out_t)
x_mu.append(x_mu_t)
x_logvar.append(x_logvar_t)
x_sample.append(x_sample_t)
out = tf.stack(out, axis=1, name="dec_pre_out")
x_mu = tf.stack(x_mu, axis=1, name="dec_x_mu")
x_logvar = tf.stack(x_logvar, axis=1, name="dec_x_logvar")
x_sample = tf.stack(x_sample, axis=1, name="dec_x_sample")
px_z = [x_mu, x_logvar]
return out, px_z, x_sample
def z2_pre_encoder(x, rhus=[256, 256]):
"""
Pre-stochastic layer encoder for z2 (latent sequence variable)
Args:
x(tf.Tensor): tensor of shape (bs, T, F)
rhus(list): list of numbers of LSTM layer hidden units
Return:
out(tf.Tensor): concatenation of hidden states of all LSTM layers
"""
bs = tf.shape(x)[0]
cell = MultiRNNCell([BasicLSTMCell(rhu) for rhu in rhus])
init_state = cell.zero_state(bs, x.dtype)
name = "z2_enc_lstm_%s" % ("_".join(map(str, rhus)),)
_, final_state = dynamic_rnn(cell, x, dtype=x.dtype,
initial_state=init_state, time_major=False, scope=name)
out = [l_final_state.h for l_final_state in final_state]
out = tf.concat(out, axis=-1)
return out
def __init__(self,
num_symbols,
num_embed_units,
num_units,
num_layers,
is_train,
vocab=None,
embed=None,
learning_rate=0.1,
learning_rate_decay_factor=0.95,
max_gradient_norm=5.0,
num_samples=512,
max_length=30,
use_lstm=True):
self.posts_1 = tf.placeholder(tf.string, shape=(None, None))
self.posts_2 = tf.placeholder(tf.string, shape=(None, None))
self.posts_3 = tf.placeholder(tf.string, shape=(None, None))
self.posts_4 = tf.placeholder(tf.string, shape=(None, None))
self.entity_1 = tf.placeholder(tf.string, shape=(None, None, None, 3))
self.entity_2 = tf.placeholder(tf.string, shape=(None, None, None, 3))
self.entity_3 = tf.placeholder(tf.string, shape=(None, None, None, 3))
self.entity_4 = tf.placeholder(tf.string, shape=(None, None, None, 3))
self.entity_mask_1 = tf.placeholder(tf.float32,
shape=(None, None, None))
self.entity_mask_2 = tf.placeholder(tf.float32,
shape=(None, None, None))
self.entity_mask_3 = tf.placeholder(tf.float32,
shape=(None, None, None))
self.entity_mask_4 = tf.placeholder(tf.float32,
shape=(None, None, None))
self.posts_length_1 = tf.placeholder(tf.int32, shape=(None))
self.posts_length_2 = tf.placeholder(tf.int32, shape=(None))
self.posts_length_3 = tf.placeholder(tf.int32, shape=(None))
self.posts_length_4 = tf.placeholder(tf.int32, shape=(None))
self.responses = tf.placeholder(tf.string, shape=(None, None))
self.responses_length = tf.placeholder(tf.int32, shape=(None))
self.epoch = tf.Variable(0, trainable=False, name='epoch')
self.epoch_add_op = self.epoch.assign(self.epoch + 1)
if is_train:
self.symbols = tf.Variable(vocab, trainable=False, name="symbols")
else:
self.symbols = tf.Variable(np.array(['.'] * num_symbols),
name="symbols")
self.symbol2index = HashTable(KeyValueTensorInitializer(
self.symbols,
tf.Variable(
np.array([i for i in range(num_symbols)], dtype=np.int32),
False)),
default_value=UNK_ID,
name="symbol2index")
self.posts_input_1 = self.symbol2index.lookup(self.posts_1)
self.posts_2_target = self.posts_2_embed = self.symbol2index.lookup(
self.posts_2)
self.posts_3_target = self.posts_3_embed = self.symbol2index.lookup(
self.posts_3)
self.posts_4_target = self.posts_4_embed = self.symbol2index.lookup(
self.posts_4)
self.responses_target = self.symbol2index.lookup(self.responses)
batch_size, decoder_len = tf.shape(self.posts_1)[0], tf.shape(
self.responses)[1]
self.posts_input_2 = tf.concat([
tf.ones([batch_size, 1], dtype=tf.int32) * GO_ID,
tf.split(self.posts_2_embed, [tf.shape(self.posts_2)[1] - 1, 1],
1)[0]
], 1)
self.posts_input_3 = tf.concat([
tf.ones([batch_size, 1], dtype=tf.int32) * GO_ID,
tf.split(self.posts_3_embed, [tf.shape(self.posts_3)[1] - 1, 1],
1)[0]
], 1)
self.posts_input_4 = tf.concat([
tf.ones([batch_size, 1], dtype=tf.int32) * GO_ID,
tf.split(self.posts_4_embed, [tf.shape(self.posts_4)[1] - 1, 1],
1)[0]
], 1)
self.responses_target = self.symbol2index.lookup(self.responses)
batch_size, decoder_len = tf.shape(self.posts_1)[0], tf.shape(
self.responses)[1]
self.responses_input = tf.concat([
tf.ones([batch_size, 1], dtype=tf.int32) * GO_ID,
tf.split(self.responses_target, [decoder_len - 1, 1], 1)[0]
], 1)
self.encoder_2_mask = tf.reshape(
tf.cumsum(tf.one_hot(self.posts_length_2 - 1,
tf.shape(self.posts_2)[1]),
reverse=True,
axis=1), [-1, tf.shape(self.posts_2)[1]])
self.encoder_3_mask = tf.reshape(
tf.cumsum(tf.one_hot(self.posts_length_3 - 1,
tf.shape(self.posts_3)[1]),
reverse=True,
axis=1), [-1, tf.shape(self.posts_3)[1]])
self.encoder_4_mask = tf.reshape(
tf.cumsum(tf.one_hot(self.posts_length_4 - 1,
tf.shape(self.posts_4)[1]),
reverse=True,
axis=1), [-1, tf.shape(self.posts_4)[1]])
self.decoder_mask = tf.reshape(
tf.cumsum(tf.one_hot(self.responses_length - 1, decoder_len),
reverse=True,
axis=1), [-1, decoder_len])
if embed is None:
self.embed = tf.get_variable('embed',
[num_symbols, num_embed_units],
tf.float32)
else:
self.embed = tf.get_variable('embed',
dtype=tf.float32,
initializer=embed)
self.encoder_input_1 = tf.nn.embedding_lookup(self.embed,
self.posts_input_1)
self.encoder_input_2 = tf.nn.embedding_lookup(self.embed,
self.posts_input_2)
self.encoder_input_3 = tf.nn.embedding_lookup(self.embed,
self.posts_input_3)
self.encoder_input_4 = tf.nn.embedding_lookup(self.embed,
self.posts_input_4)
self.decoder_input = tf.nn.embedding_lookup(self.embed,
self.responses_input)
entity_embedding_1 = tf.reshape(
tf.nn.embedding_lookup(self.embed,
self.symbol2index.lookup(self.entity_1)),
[
batch_size,
tf.shape(self.entity_1)[1],
tf.shape(self.entity_1)[2], 3 * num_embed_units
])
entity_embedding_2 = tf.reshape(
tf.nn.embedding_lookup(self.embed,
self.symbol2index.lookup(self.entity_2)),
[
batch_size,
tf.shape(self.entity_2)[1],
tf.shape(self.entity_2)[2], 3 * num_embed_units
])
entity_embedding_3 = tf.reshape(
tf.nn.embedding_lookup(self.embed,
self.symbol2index.lookup(self.entity_3)),
[
batch_size,
tf.shape(self.entity_3)[1],
tf.shape(self.entity_3)[2], 3 * num_embed_units
])
entity_embedding_4 = tf.reshape(
tf.nn.embedding_lookup(self.embed,
self.symbol2index.lookup(self.entity_4)),
[
batch_size,
tf.shape(self.entity_4)[1],
tf.shape(self.entity_4)[2], 3 * num_embed_units
])
head_1, relation_1, tail_1 = tf.split(entity_embedding_1,
[num_embed_units] * 3,
axis=3)
head_2, relation_2, tail_2 = tf.split(entity_embedding_2,
[num_embed_units] * 3,
axis=3)
head_3, relation_3, tail_3 = tf.split(entity_embedding_3,
[num_embed_units] * 3,
axis=3)
head_4, relation_4, tail_4 = tf.split(entity_embedding_4,
[num_embed_units] * 3,
axis=3)
with tf.variable_scope('graph_attention'):
#[batch_size, max_reponse_length, max_triple_num, 2*embed_units]
head_tail_1 = tf.concat([head_1, tail_1], axis=3)
#[batch_size, max_reponse_length, max_triple_num, embed_units]
head_tail_transformed_1 = tf.layers.dense(
head_tail_1,
num_embed_units,
activation=tf.tanh,
name='head_tail_transform')
#[batch_size, max_reponse_length, max_triple_num, embed_units]
relation_transformed_1 = tf.layers.dense(relation_1,
num_embed_units,
name='relation_transform')
#[batch_size, max_reponse_length, max_triple_num]
e_weight_1 = tf.reduce_sum(relation_transformed_1 *
head_tail_transformed_1,
axis=3)
#[batch_size, max_reponse_length, max_triple_num]
alpha_weight_1 = tf.nn.softmax(e_weight_1)
#[batch_size, max_reponse_length, embed_units]
graph_embed_1 = tf.reduce_sum(
tf.expand_dims(alpha_weight_1, 3) *
(tf.expand_dims(self.entity_mask_1, 3) * head_tail_1),
axis=2)
with tf.variable_scope('graph_attention', reuse=True):
head_tail_2 = tf.concat([head_2, tail_2], axis=3)
head_tail_transformed_2 = tf.layers.dense(
head_tail_2,
num_embed_units,
activation=tf.tanh,
name='head_tail_transform')
relation_transformed_2 = tf.layers.dense(relation_2,
num_embed_units,
name='relation_transform')
e_weight_2 = tf.reduce_sum(relation_transformed_2 *
head_tail_transformed_2,
axis=3)
alpha_weight_2 = tf.nn.softmax(e_weight_2)
graph_embed_2 = tf.reduce_sum(
tf.expand_dims(alpha_weight_2, 3) *
(tf.expand_dims(self.entity_mask_2, 3) * head_tail_2),
axis=2)
with tf.variable_scope('graph_attention', reuse=True):
head_tail_3 = tf.concat([head_3, tail_3], axis=3)
head_tail_transformed_3 = tf.layers.dense(
head_tail_3,
num_embed_units,
activation=tf.tanh,
name='head_tail_transform')
relation_transformed_3 = tf.layers.dense(relation_3,
num_embed_units,
name='relation_transform')
e_weight_3 = tf.reduce_sum(relation_transformed_3 *
head_tail_transformed_3,
axis=3)
alpha_weight_3 = tf.nn.softmax(e_weight_3)
graph_embed_3 = tf.reduce_sum(
tf.expand_dims(alpha_weight_3, 3) *
(tf.expand_dims(self.entity_mask_3, 3) * head_tail_3),
axis=2)
with tf.variable_scope('graph_attention', reuse=True):
head_tail_4 = tf.concat([head_4, tail_4], axis=3)
head_tail_transformed_4 = tf.layers.dense(
head_tail_4,
num_embed_units,
activation=tf.tanh,
name='head_tail_transform')
relation_transformed_4 = tf.layers.dense(relation_4,
num_embed_units,
name='relation_transform')
e_weight_4 = tf.reduce_sum(relation_transformed_4 *
head_tail_transformed_4,
axis=3)
alpha_weight_4 = tf.nn.softmax(e_weight_4)
graph_embed_4 = tf.reduce_sum(
tf.expand_dims(alpha_weight_4, 3) *
(tf.expand_dims(self.entity_mask_4, 3) * head_tail_4),
axis=2)
if use_lstm:
cell = MultiRNNCell([LSTMCell(num_units)] * num_layers)
else:
cell = MultiRNNCell([GRUCell(num_units)] * num_layers)
output_fn, sampled_sequence_loss = output_projection_layer(
num_units, num_symbols, num_samples)
encoder_output_1, encoder_state_1 = dynamic_rnn(cell,
self.encoder_input_1,
self.posts_length_1,
dtype=tf.float32,
scope="encoder")
attention_keys_1, attention_values_1, attention_score_fn_1, attention_construct_fn_1 \
= attention_decoder_fn.prepare_attention(graph_embed_1, encoder_output_1, 'luong', num_units)
decoder_fn_train_1 = attention_decoder_fn.attention_decoder_fn_train(
encoder_state_1,
attention_keys_1,
attention_values_1,
attention_score_fn_1,
attention_construct_fn_1,
max_length=tf.reduce_max(self.posts_length_2))
encoder_output_2, encoder_state_2, alignments_ta_2 = dynamic_rnn_decoder(
cell,
decoder_fn_train_1,
self.encoder_input_2,
self.posts_length_2,
scope="decoder")
self.alignments_2 = tf.transpose(alignments_ta_2.stack(),
perm=[1, 0, 2])
self.decoder_loss_2 = sampled_sequence_loss(encoder_output_2,
self.posts_2_target,
self.encoder_2_mask)
with variable_scope.variable_scope('', reuse=True):
attention_keys_2, attention_values_2, attention_score_fn_2, attention_construct_fn_2 \
= attention_decoder_fn.prepare_attention(graph_embed_2, encoder_output_2, 'luong', num_units)
decoder_fn_train_2 = attention_decoder_fn.attention_decoder_fn_train(
encoder_state_2,
attention_keys_2,
attention_values_2,
attention_score_fn_2,
attention_construct_fn_2,
max_length=tf.reduce_max(self.posts_length_3))
encoder_output_3, encoder_state_3, alignments_ta_3 = dynamic_rnn_decoder(
cell,
decoder_fn_train_2,
self.encoder_input_3,
self.posts_length_3,
scope="decoder")
self.alignments_3 = tf.transpose(alignments_ta_3.stack(),
perm=[1, 0, 2])
self.decoder_loss_3 = sampled_sequence_loss(
encoder_output_3, self.posts_3_target, self.encoder_3_mask)
attention_keys_3, attention_values_3, attention_score_fn_3, attention_construct_fn_3 \
= attention_decoder_fn.prepare_attention(graph_embed_3, encoder_output_3, 'luong', num_units)
decoder_fn_train_3 = attention_decoder_fn.attention_decoder_fn_train(
encoder_state_3,
attention_keys_3,
attention_values_3,
attention_score_fn_3,
attention_construct_fn_3,
max_length=tf.reduce_max(self.posts_length_4))
encoder_output_4, encoder_state_4, alignments_ta_4 = dynamic_rnn_decoder(
cell,
decoder_fn_train_3,
self.encoder_input_4,
self.posts_length_4,
scope="decoder")
self.alignments_4 = tf.transpose(alignments_ta_4.stack(),
perm=[1, 0, 2])
self.decoder_loss_4 = sampled_sequence_loss(
encoder_output_4, self.posts_4_target, self.encoder_4_mask)
attention_keys, attention_values, attention_score_fn, attention_construct_fn \
= attention_decoder_fn.prepare_attention(graph_embed_4, encoder_output_4, 'luong', num_units)
if is_train:
with variable_scope.variable_scope('', reuse=True):
decoder_fn_train = attention_decoder_fn.attention_decoder_fn_train(
encoder_state_4,
attention_keys,
attention_values,
attention_score_fn,
attention_construct_fn,
max_length=tf.reduce_max(self.responses_length))
self.decoder_output, _, alignments_ta = dynamic_rnn_decoder(
cell,
decoder_fn_train,
self.decoder_input,
self.responses_length,
scope="decoder")
self.alignments = tf.transpose(alignments_ta.stack(),
perm=[1, 0, 2])
self.decoder_loss = sampled_sequence_loss(
self.decoder_output, self.responses_target,
self.decoder_mask)
self.params = tf.trainable_variables()
self.learning_rate = tf.Variable(float(learning_rate),
trainable=False,
dtype=tf.float32)
self.learning_rate_decay_op = self.learning_rate.assign(
self.learning_rate * learning_rate_decay_factor)
self.global_step = tf.Variable(0, trainable=False)
#opt = tf.train.GradientDescentOptimizer(self.learning_rate)
opt = tf.train.MomentumOptimizer(self.learning_rate, 0.9)
gradients = tf.gradients(
self.decoder_loss + self.decoder_loss_2 + self.decoder_loss_3 +
self.decoder_loss_4, self.params)
clipped_gradients, self.gradient_norm = tf.clip_by_global_norm(
gradients, max_gradient_norm)
self.update = opt.apply_gradients(zip(clipped_gradients,
self.params),
global_step=self.global_step)
else:
with variable_scope.variable_scope('', reuse=True):
decoder_fn_inference = attention_decoder_fn.attention_decoder_fn_inference(
output_fn, encoder_state_4, attention_keys,
attention_values, attention_score_fn,
attention_construct_fn, self.embed, GO_ID, EOS_ID,
max_length, num_symbols)
self.decoder_distribution, _, alignments_ta = dynamic_rnn_decoder(
cell, decoder_fn_inference, scope="decoder")
output_len = tf.shape(self.decoder_distribution)[1]
self.alignments = tf.transpose(
alignments_ta.gather(tf.range(output_len)), [1, 0, 2])
self.generation_index = tf.argmax(
tf.split(self.decoder_distribution, [2, num_symbols - 2],
2)[1], 2) + 2 # for removing UNK
self.generation = tf.nn.embedding_lookup(self.symbols,
self.generation_index,
name="generation")
self.params = tf.trainable_variables()
self.saver = tf.train.Saver(tf.global_variables(),
write_version=tf.train.SaverDef.V2,
max_to_keep=10,
pad_step_number=True,
keep_checkpoint_every_n_hours=1.0)
def __init__(self, model_parameters, training_parameters, directories,
**kwargs):
""" Initialization of the RNN Model as TensorFlow computational graph
"""
self.model_parameters = model_parameters
self.training_parameters = training_parameters
self.directories = directories
# Define model hyperparameters Tensors
with tf.name_scope("Parameters"):
self.learning_rate = tf.placeholder(tf.float32,
name="learning_rate")
self.momentum = tf.placeholder(tf.float32, name="momentum")
self.input_keep_probability = tf.placeholder(
tf.float32, name="input_keep_probability")
self.output_keep_probability = tf.placeholder(
tf.float32, name="output_keep_probability")
# Define input, output and initialization Tensors
with tf.name_scope("Input"):
self.inputs = tf.placeholder("float", [
None, self.model_parameters.sequence_length,
self.model_parameters.input_dimension
],
name='input_placeholder')
self.targets = tf.placeholder("float", [
None, self.model_parameters.sequence_length,
self.model_parameters.n_classes
],
name='labels_placeholder')
self.init = tf.placeholder(
tf.float32,
shape=[None, self.model_parameters.state_size],
name="init")
# Define the TensorFlow RNN computational graph
with tf.name_scope("RNN"):
cells = []
# Define the layers
for _ in range(self.model_parameters.n_layers):
if self.model_parameters.model == 'rnn':
cell = BasicRNNCell(self.model_parameters.state_size)
elif self.model_parameters.model == 'gru':
cell = GRUCell(self.model_parameters.state_size)
elif self.model_parameters.model == 'lstm':
cell = BasicLSTMCell(self.model_parameters.state_size,
state_is_tuple=True)
elif self.model_parameters.model == 'nas':
cell = NASCell(self.model_parameters.state_size)
else:
raise Exception("model type not supported: {}".format(
self.model_parameters.model))
if (self.model_parameters.output_keep_probability < 1.0
or self.model_parameters.input_keep_probability < 1.0):
if self.model_parameters.output_keep_probability < 1.0:
cell = DropoutWrapper(
cell,
output_keep_prob=self.output_keep_probability)
if self.model_parameters.input_keep_probability < 1.0:
cell = DropoutWrapper(
cell, input_keep_prob=self.input_keep_probability)
cells.append(cell)
cell = MultiRNNCell(cells)
# Simulate time steps and get RNN cell output
self.outputs, self.next_state = tf.nn.dynamic_rnn(cell,
self.inputs,
dtype=tf.float32)
# Define cost Tensors
with tf.name_scope("Cost"):
# Flatten to apply same weights to all time steps
self.flattened_outputs = tf.reshape(
self.outputs, [-1, self.model_parameters.state_size],
name="flattened_outputs")
self.softmax_w = tf.Variable(tf.truncated_normal([
self.model_parameters.state_size,
self.model_parameters.n_classes
],
stddev=0.01),
name="softmax_weights")
self.softmax_b = tf.Variable(tf.constant(
0.1, shape=[self.model_parameters.n_classes]),
name="softmax_biases")
# Softmax activation layer, using RNN inner loop last output
# logits and labels must have the same shape [batch_size, num_classes]
self.logits = tf.matmul(self.flattened_outputs,
self.softmax_w) + self.softmax_b
self.unshaped_predictions = tf.nn.softmax(
self.logits, name="unshaped_predictions")
tf.summary.histogram('logits', self.logits)
# Return to the initial predictions shape
self.predictions = tf.reshape(self.unshaped_predictions, [
-1, self.model_parameters.sequence_length,
self.model_parameters.n_classes
],
name="predictions")
self.cross_entropy = tf.reduce_mean(-tf.reduce_sum(
self.targets *
tf.log(self.predictions), reduction_indices=[2]))
# Get the most likely label for each input
self.label_prediction = tf.argmax(self.predictions,
2,
name="label_predictions")
# Compare predictions to labels
self.correct_prediction = tf.equal(tf.argmax(self.predictions, 2),
tf.argmax(self.targets, 2),
name="correct_predictions")
self.accuracy = tf.reduce_mean(tf.cast(self.correct_prediction,
tf.float32),
name="accuracy")
# Define Training Tensors
with tf.name_scope("Train"):
#self.validation_perplexity = tf.Variable(dtype=tf.float32, initial_value=float("inf"),
#trainable=False,
#name="validation_perplexity")
#self.validation_accuracy = tf.Variable(dtype=tf.float32, initial_value=float("inf"),
#trainable=False,
#name="validation_accuracy")
#tf.scalar_summary(self.validation_perplexity.op.name, self.validation_perplexity)
#tf.scalar_summary(self.validation_accuracy.op.name, self.validation_accuracy)
#self.training_epoch_perplexity = tf.Variable(dtype=tf.float32, initial_value=float("inf"),
#trainable=False,
#name="training_epoch_perplexity")
#self.training_epoch_accuracy = tf.Variable(dtype=tf.float32, initial_value=float("inf"),
#trainable=False,
#name="training_epoch_accuracy")
#tf.scalar_summary(self.training_epoch_perplexity.op.name, self.training_epoch_perplexity)
#tf.scalar_summary(self.training_epoch_accuracy.op.name, self.training_epoch_accuracy)
#self.iteration = tf.Variable(0, dtype=tf.int64, name="iteration", trainable=False)
# Momentum optimisation
self.optimizer = tf.train.MomentumOptimizer(
learning_rate=self.learning_rate,
momentum=self.momentum,
name="optimizer")
self.train_step = self.optimizer.minimize(self.cross_entropy,
name="train_step")
# Initializing the variables
self.initializer = tf.global_variables_initializer()
def __init__(self,
num_symbols,
num_embed_units,
num_units,
num_layers,
beam_size,
embed,
learning_rate=0.5,
remove_unk=False,
learning_rate_decay_factor=0.95,
max_gradient_norm=5.0,
num_samples=512,
max_length=8,
use_lstm=False):
self.posts = tf.placeholder(tf.string, (None, None),
'enc_inps') # batch*len
self.posts_length = tf.placeholder(tf.int32, (None),
'enc_lens') # batch
self.responses = tf.placeholder(tf.string, (None, None),
'dec_inps') # batch*len
self.responses_length = tf.placeholder(tf.int32, (None),
'dec_lens') # batch
# initialize the training process
self.learning_rate = tf.Variable(float(learning_rate),
trainable=False,
dtype=tf.float32)
self.learning_rate_decay_op = self.learning_rate.assign(
self.learning_rate * learning_rate_decay_factor)
self.global_step = tf.Variable(0, trainable=False)
self.symbol2index = MutableHashTable(key_dtype=tf.string,
value_dtype=tf.int64,
default_value=UNK_ID,
shared_name="in_table",
name="in_table",
checkpoint=True)
self.index2symbol = MutableHashTable(key_dtype=tf.int64,
value_dtype=tf.string,
default_value='_UNK',
shared_name="out_table",
name="out_table",
checkpoint=True)
# build the vocab table (string to index)
self.posts_input = self.symbol2index.lookup(self.posts) # batch*len
self.responses_target = self.symbol2index.lookup(
self.responses) #batch*len
batch_size, decoder_len = tf.shape(self.responses)[0], tf.shape(
self.responses)[1]
self.responses_input = tf.concat([
tf.ones([batch_size, 1], dtype=tf.int64) * GO_ID,
tf.split(self.responses_target, [decoder_len - 1, 1], 1)[0]
], 1) # batch*len
self.decoder_mask = tf.reshape(
tf.cumsum(tf.one_hot(self.responses_length - 1, decoder_len),
reverse=True,
axis=1), [-1, decoder_len])
# build the embedding table (index to vector)
if embed is None:
# initialize the embedding randomly
self.embed = tf.get_variable('embed',
[num_symbols, num_embed_units],
tf.float32)
else:
# initialize the embedding by pre-trained word vectors
self.embed = tf.get_variable('embed',
dtype=tf.float32,
initializer=embed)
self.encoder_input = tf.nn.embedding_lookup(
self.embed, self.posts_input) #batch*len*unit
self.decoder_input = tf.nn.embedding_lookup(self.embed,
self.responses_input)
if use_lstm:
cell = MultiRNNCell([LSTMCell(num_units)] * num_layers)
else:
cell = MultiRNNCell([GRUCell(num_units)] * num_layers)
# rnn encoder
encoder_output, encoder_state = dynamic_rnn(cell,
self.encoder_input,
self.posts_length,
dtype=tf.float32,
scope="encoder")
# get output projection function
output_fn, sampled_sequence_loss = output_projection_layer(
num_units, num_symbols, num_samples)
# get attention function
attention_keys, attention_values, attention_score_fn, attention_construct_fn \
= attention_decoder_fn.prepare_attention(encoder_output, 'luong', num_units)
with tf.variable_scope('decoder'):
decoder_fn_train = attention_decoder_fn.attention_decoder_fn_train(
encoder_state, attention_keys, attention_values,
attention_score_fn, attention_construct_fn)
self.decoder_output, _, _ = dynamic_rnn_decoder(
cell,
decoder_fn_train,
self.decoder_input,
self.responses_length,
scope="decoder_rnn")
self.decoder_loss = sampled_sequence_loss(self.decoder_output,
self.responses_target,
self.decoder_mask)
with tf.variable_scope('decoder', reuse=True):
decoder_fn_inference = attention_decoder_fn.attention_decoder_fn_inference(
output_fn, encoder_state, attention_keys, attention_values,
attention_score_fn, attention_construct_fn, self.embed, GO_ID,
EOS_ID, max_length, num_symbols)
self.decoder_distribution, _, _ = dynamic_rnn_decoder(
cell, decoder_fn_inference, scope="decoder_rnn")
self.generation_index = tf.argmax(
tf.split(self.decoder_distribution, [2, num_symbols - 2],
2)[1], 2) + 2 # for removing UNK
self.generation = self.index2symbol.lookup(self.generation_index,
name='generation')
with tf.variable_scope('decoder', reuse=True):
decoder_fn_beam_inference = attention_decoder_fn_beam_inference(
output_fn, encoder_state, attention_keys, attention_values,
attention_score_fn, attention_construct_fn, self.embed, GO_ID,
EOS_ID, max_length, num_symbols, beam_size, remove_unk)
_, _, self.context_state = dynamic_rnn_decoder(
cell, decoder_fn_beam_inference, scope="decoder_rnn")
(log_beam_probs, beam_parents, beam_symbols, result_probs,
result_parents, result_symbols) = self.context_state
self.beam_parents = tf.transpose(tf.reshape(
beam_parents.stack(), [max_length + 1, -1, beam_size]),
[1, 0, 2],
name='beam_parents')
self.beam_symbols = tf.transpose(
tf.reshape(beam_symbols.stack(),
[max_length + 1, -1, beam_size]), [1, 0, 2])
self.beam_symbols = self.index2symbol.lookup(tf.cast(
self.beam_symbols, tf.int64),
name="beam_symbols")
self.result_probs = tf.transpose(tf.reshape(
result_probs.stack(), [max_length + 1, -1, beam_size * 2]),
[1, 0, 2],
name='result_probs')
self.result_symbols = tf.transpose(
tf.reshape(result_symbols.stack(),
[max_length + 1, -1, beam_size * 2]), [1, 0, 2])
self.result_parents = tf.transpose(tf.reshape(
result_parents.stack(), [max_length + 1, -1, beam_size * 2]),
[1, 0, 2],
name='result_parents')
self.result_symbols = self.index2symbol.lookup(
tf.cast(self.result_symbols, tf.int64), name='result_symbols')
self.params = tf.trainable_variables()
# calculate the gradient of parameters
opt = tf.train.GradientDescentOptimizer(self.learning_rate)
gradients = tf.gradients(self.decoder_loss, self.params)
clipped_gradients, self.gradient_norm = tf.clip_by_global_norm(
gradients, max_gradient_norm)
self.update = opt.apply_gradients(zip(clipped_gradients, self.params),
global_step=self.global_step)
self.saver = tf.train.Saver(write_version=tf.train.SaverDef.V2,
max_to_keep=3,
pad_step_number=True,
keep_checkpoint_every_n_hours=1.0)
# Exporter for serving
self.model_exporter = exporter.Exporter(self.saver)
inputs = {"enc_inps:0": self.posts, "enc_lens:0": self.posts_length}
outputs = {
"beam_symbols": self.beam_symbols,
"beam_parents": self.beam_parents,
"result_probs": self.result_probs,
"result_symbols": self.result_symbols,
"result_parents": self.result_parents
}
self.model_exporter.init(tf.get_default_graph().as_graph_def(),
named_graph_signatures={
"inputs":
exporter.generic_signature(inputs),
"outputs":
exporter.generic_signature(outputs)
})
def __init__(self,
num_symbols,
num_qwords, #modify
num_embed_units,
num_units,
num_layers,
is_train,
vocab=None,
embed=None,
question_data=True,
learning_rate=0.5,
learning_rate_decay_factor=0.95,
max_gradient_norm=5.0,
num_samples=512,
max_length=30,
use_lstm=False):
self.posts = tf.placeholder(tf.string, shape=(None, None)) # batch*len
self.posts_length = tf.placeholder(tf.int32, shape=(None)) # batch
self.responses = tf.placeholder(tf.string, shape=(None, None)) # batch*len
self.responses_length = tf.placeholder(tf.int32, shape=(None)) # batch
self.keyword_tensor = tf.placeholder(tf.float32, shape=(None, 3, None)) #(batch * len) * 3 * numsymbol
self.word_type = tf.placeholder(tf.int32, shape=(None)) #(batch * len)
# build the vocab table (string to index)
if is_train:
self.symbols = tf.Variable(vocab, trainable=False, name="symbols")
else:
self.symbols = tf.Variable(np.array(['.']*num_symbols), name="symbols")
self.symbol2index = HashTable(KeyValueTensorInitializer(self.symbols,
tf.Variable(np.array([i for i in range(num_symbols)], dtype=np.int32), False)),
default_value=UNK_ID, name="symbol2index")
self.posts_input = self.symbol2index.lookup(self.posts) # batch*len
self.responses_target = self.symbol2index.lookup(self.responses) #batch*len
batch_size, decoder_len = tf.shape(self.responses)[0], tf.shape(self.responses)[1]
self.responses_input = tf.concat([tf.ones([batch_size, 1], dtype=tf.int32)*GO_ID,
tf.split(self.responses_target, [decoder_len-1, 1], 1)[0]], 1) # batch*len
#delete the last column of responses_target) and add 'GO at the front of it.
self.decoder_mask = tf.reshape(tf.cumsum(tf.one_hot(self.responses_length-1,
decoder_len), reverse=True, axis=1), [-1, decoder_len]) # bacth * len
print "embedding..."
# build the embedding table (index to vector)
if embed is None:
# initialize the embedding randomly
self.embed = tf.get_variable('embed', [num_symbols, num_embed_units], tf.float32)
else:
print len(vocab), len(embed), len(embed[0])
print embed
# initialize the embedding by pre-trained word vectors
self.embed = tf.get_variable('embed', dtype=tf.float32, initializer=embed)
self.encoder_input = tf.nn.embedding_lookup(self.embed, self.posts_input) #batch*len*unit
self.decoder_input = tf.nn.embedding_lookup(self.embed, self.responses_input)
print "embedding finished"
if use_lstm:
cell = MultiRNNCell([LSTMCell(num_units)] * num_layers)
else:
cell = MultiRNNCell([GRUCell(num_units)] * num_layers)
# rnn encoder
encoder_output, encoder_state = dynamic_rnn(cell, self.encoder_input,
self.posts_length, dtype=tf.float32, scope="encoder")
# get output projection function
output_fn, sampled_sequence_loss = output_projection_layer(num_units,
num_symbols, num_qwords, num_samples, question_data)
print "encoder_output.shape:", encoder_output.get_shape()
# get attention function
attention_keys, attention_values, attention_score_fn, attention_construct_fn \
= attention_decoder_fn.prepare_attention(encoder_output, 'luong', num_units)
# get decoding loop function
decoder_fn_train = attention_decoder_fn.attention_decoder_fn_train(encoder_state,
attention_keys, attention_values, attention_score_fn, attention_construct_fn)
decoder_fn_inference = attention_decoder_fn.attention_decoder_fn_inference(output_fn,
self.keyword_tensor,
encoder_state, attention_keys, attention_values, attention_score_fn,
attention_construct_fn, self.embed, GO_ID, EOS_ID, max_length, num_symbols)
if is_train:
# rnn decoder
self.decoder_output, _, _ = dynamic_rnn_decoder(cell, decoder_fn_train,
self.decoder_input, self.responses_length, scope="decoder")
# calculate the loss of decoder
# self.decoder_output = tf.Print(self.decoder_output, [self.decoder_output])
self.decoder_loss, self.log_perplexity = sampled_sequence_loss(self.decoder_output,
self.responses_target, self.decoder_mask, self.keyword_tensor, self.word_type)
# building graph finished and get all parameters
self.params = tf.trainable_variables()
for item in tf.trainable_variables():
print item.name, item.get_shape()
# initialize the training process
self.learning_rate = tf.Variable(float(learning_rate), trainable=False,
dtype=tf.float32)
self.learning_rate_decay_op = self.learning_rate.assign(
self.learning_rate * learning_rate_decay_factor)
self.global_step = tf.Variable(0, trainable=False)
# calculate the gradient of parameters
opt = tf.train.GradientDescentOptimizer(self.learning_rate)
gradients = tf.gradients(self.decoder_loss, self.params)
clipped_gradients, self.gradient_norm = tf.clip_by_global_norm(gradients,
max_gradient_norm)
self.update = opt.apply_gradients(zip(clipped_gradients, self.params),
global_step=self.global_step)
else:
# rnn decoder
self.decoder_distribution, _, _ = dynamic_rnn_decoder(cell, decoder_fn_inference,
scope="decoder")
print("self.decoder_distribution.shape():",self.decoder_distribution.get_shape())
self.decoder_distribution = tf.Print(self.decoder_distribution, ["distribution.shape()", tf.reduce_sum(self.decoder_distribution)])
# generating the response
self.generation_index = tf.argmax(tf.split(self.decoder_distribution,
[2, num_symbols-2], 2)[1], 2) + 2 # for removing UNK
self.generation = tf.nn.embedding_lookup(self.symbols, self.generation_index)
self.params = tf.trainable_variables()
self.saver = tf.train.Saver(tf.global_variables(), write_version=tf.train.SaverDef.V2,
max_to_keep=3, pad_step_number=True, keep_checkpoint_every_n_hours=1.0)
def _build_rnn_decoder_and_recon_x(self,
inputs,
targets,
training,
reuse=False):
with tf.variable_scope("dec_rec_and_recon_x", reuse=reuse):
C, T, F = self._model_conf["target_shape"]
Cell = _cell_dict[self._model_conf["rec_cell_type"]]
cell = MultiRNNCell([Cell(hu) \
for hu in self._model_conf["rec_dec"]])
if self._model_conf["rec_learn_init"]:
raise NotImplementedError
else:
input_shape = tuple(array_ops.shape(input_) \
for input_ in nest.flatten(inputs))
batch_size = input_shape[0][0]
init_state = cell.zero_state(batch_size,
self._model_conf["input_dtype"])
rec_dec_inp = self._model_conf["rec_dec_inp_test"]
if training:
rec_dec_inp = self._model_conf["rec_dec_inp_train"]
if rec_dec_inp is not None:
n_concur = self._model_conf["rec_dec_concur"]
if T % n_concur != 0:
raise ValueError("total time steps must be " + \
"multiples of rec_dec_concur")
n_frame = T // n_concur
else:
n_frame = T
n_hist = self._model_conf["rec_dec_inp_hist"]
info("decoder: n_frame=%s, n_concur=%s, n_hist=%s" %
(n_frame, n_concur, n_hist))
def make_hist(hist, new_hist):
with tf.name_scope("make_hist"):
if not self._model_conf["x_conti"]:
# TODO add target embedding?
new_hist = tf.cast(new_hist, tf.float32)
if n_hist > n_concur:
diff = n_hist - n_concur
return tf.concat([hist[:, :, -diff:, :], new_hist],
axis=-2)
else:
return new_hist[:, :, -n_hist:, :]
outputs = []
if self._model_conf["x_conti"]:
x_mu, x_logvar, x = [], [], []
else:
x_logits, x = [], []
state_f = init_state
hist = tf.zeros((array_ops.shape(inputs)[0], C, n_hist, F),
dtype=self._model_conf["input_dtype"],
name="init_hist")
for f in xrange(n_frame):
input_f = inputs
if rec_dec_inp:
input_f = tf.concat(
[inputs,
tf.reshape(hist, (-1, C * n_hist * F))],
axis=-1,
name="input_f_%s" % f)
if f > 0:
tf.get_variable_scope().reuse_variables()
output_f, state_f = cell(input_f, state_f)
outputs.append(output_f)
# TODO: input hist as well (like sampleRNN)?
if self._model_conf["x_conti"]:
x_mu_f, x_logvar_f, x_f = dense_latent(
inputs=output_f,
num_outputs=C * n_concur * F,
mu_nl=self._model_conf["x_mu_nl"],
logvar_nl=self._model_conf["x_logvar_nl"],
scope="recon_x_f")
x_mu.append(
tf.reshape(x_mu_f, (-1, C, n_concur, F),
name="recon_x_mu_f_4d"))
x_logvar.append(
tf.reshape(x_logvar_f, (-1, C, n_concur, F),
name="recon_x_logvar_f_4d"))
x.append(
tf.reshape(x_f, (-1, C, n_concur, F),
name="recon_x_f_4d"))
if rec_dec_inp == "targets":
t_slice = slice(f * n_concur, (f + 1) * n_concur)
hist = make_hist(hist, targets[:, :, t_slice, :])
elif rec_dec_inp == "x_mu":
hist = make_hist(hist, x_mu[-1])
elif rec_dec_inp == "x":
hist = make_hist(hist, x[-1])
elif rec_dec_inp:
raise ValueError("unsupported rec_dec_inp (%s)" %
(rec_dec_inp))
else:
raise ValueError
# n_bins = self._model_conf["n_bins"]
# x_logits_f, x_f = cat_dense_latent(
# inputs=output_f,
# num_outputs=C * n_concur * F,
# n_bins=n_bins,
# scope="recon_x_f")
# x_logits.append(tf.reshape(
# x_logits_f,
# (-1, C, n_concur, F, n_bins),
# name="recon_x_logits_f_5d"))
# x.append(tf.reshape(
# x_f,
# (-1, C, n_concur, F),
# name="recon_x_f_4d"))
# if rec_dec_inp == "targets":
# t_slice = slice(f * n_concur, (f + 1) * n_concur)
# hist = make_hist(hist, targets[:, :, t_slice, :])
# elif rec_dec_inp == "x_max":
# hist = make_hist(hist, tf.argmax(x_logits[-1], -1))
# elif rec_dec_inp == "x":
# hist = make_hist(hist, x[-1])
# elif rec_dec_inp:
# raise ValueError("unsupported rec_dec_inp (%s)" % (
# rec_dec_inp))
# (bs, n_frame, top_rnn_hu)
outputs = tf.stack(outputs, axis=1, name="rec_outputs")
x = tf.concat(x, axis=2, name="recon_x_t_4d")
if self._model_conf["x_conti"]:
x_mu = tf.concat(x_mu, axis=2, name="recon_x_mu_t_4d")
x_logvar = tf.concat(x_logvar,
axis=2,
name="recon_x_logvar_t_4d")
px = [x_mu, x_logvar]
else:
x_logits = tf.concat(x_logits,
axis=2,
name="recon_x_logits_t_5d")
px = x_logits
return outputs, px, x
def _build_z2_encoder(self, inputs, z1, reuse=False):
weights_regularizer = l2_regularizer(self._train_conf["l2_weight"])
normalizer_fn = batch_norm if self._model_conf["if_bn"] else None
normalizer_params = None
if self._model_conf["if_bn"]:
normalizer_params = {
"scope": "BatchNorm",
"is_training": self._feed_dict["is_train"],
"reuse": reuse
}
# TODO: need to upgrade to latest,
# which commit support param_regularizers args
if not hasattr(self, "_debug_outputs"):
self._debug_outputs = {}
C, T, F = self._model_conf["target_shape"]
n_concur = self._model_conf["rec_z2_enc_concur"]
if T % n_concur != 0:
raise ValueError("total time steps must be multiples of %s" %
(n_concur))
n_frame = T // n_concur
info("z2_encoder: n_frame=%s, n_concur=%s" % (n_frame, n_concur))
# input_dim = np.prod(inputs.get_shape().as_list()[1:])
# outputs = tf.concat([tf.reshape(inputs, [-1, input_dim]), z1], axis=1)
with tf.variable_scope("z2_enc", reuse=reuse):
# recurrent layers
if self._model_conf["rec_z2_enc"]:
# reshape to (N, n_frame, n_concur*C*F)
inputs = array_ops.transpose(inputs, (0, 2, 1, 3))
inputs_shape = inputs.get_shape().as_list()
inputs_depth = np.prod(inputs_shape[2:])
new_shape = (-1, n_frame, n_concur * inputs_depth)
inputs = tf.reshape(inputs, new_shape)
# append z1 to each frame
tiled_z1 = tf.tile(tf.expand_dims(z1, 1), (1, n_frame, 1))
inputs = tf.concat([inputs, tiled_z1], axis=-1)
self._debug_outputs["inp_reshape"] = inputs
if self._model_conf["rec_z2_enc_bi"]:
raise NotImplementedError
else:
Cell = _cell_dict[self._model_conf["rec_cell_type"]]
cell = MultiRNNCell([Cell(hu) \
for hu in self._model_conf["rec_z2_enc"]])
if self._model_conf["rec_learn_init"]:
raise NotImplementedError
else:
input_shape = tuple(array_ops.shape(input_) \
for input_ in nest.flatten(inputs))
batch_size = input_shape[0][0]
init_state = cell.zero_state(
batch_size, self._model_conf["input_dtype"])
_, final_states = dynamic_rnn(
cell,
inputs,
dtype=self._model_conf["input_dtype"],
initial_state=init_state,
time_major=False,
scope="z2_enc_%sL_rec" %
len(self._model_conf["rec_z2_enc"]))
self._debug_outputs["raw_rnn_out"] = _
self._debug_outputs["raw_rnn_final"] = final_states
if self._model_conf["rec_z2_enc_out"].startswith("last"):
final_states = final_states[-1:]
if self._model_conf["rec_cell_type"] == "lstm":
outputs = []
for state in final_states:
if "h" in self._model_conf["rec_z2_enc_out"].split(
"_")[1]:
outputs.append(state.h)
if "c" in self._model_conf["rec_z2_enc_out"].split(
"_")[1]:
outputs.append(state.c)
else:
outputs = final_states
outputs = tf.concat(outputs, axis=-1)
self._debug_outputs["concat_rnn_out"] = outputs
else:
input_dim = np.prod(inputs.get_shape().as_list()[1:])
outputs = tf.concat([tf.reshape(inputs, [-1, input_dim]), z1],
axis=1)
# fully connected layers
output_dim = np.prod(outputs.get_shape().as_list()[1:])
outputs = tf.reshape(outputs, [-1, output_dim])
for i, hu in enumerate(self._model_conf["hu_z2_enc"]):
outputs = fully_connected(
inputs=outputs,
num_outputs=hu,
activation_fn=nn.relu,
normalizer_fn=normalizer_fn,
normalizer_params=normalizer_params,
weights_regularizer=weights_regularizer,
reuse=reuse,
scope="z2_enc_fc%s" % (i + 1))
z2_mu, z2_logvar, z2 = dense_latent(
outputs,
self._model_conf["n_latent2"],
logvar_nl=self._model_conf["z2_logvar_nl"],
reuse=reuse,
scope="z2_enc_lat")
return [z2_mu, z2_logvar], z2
def __init__(self,
model_parameters,
training_parameters,
directories,
**kwargs):
""" Initialization of the RNN Model as TensorFlow computational graph
"""
self.model_parameters = model_parameters
self.training_parameters = training_parameters
self.directories = directories
# Define model hyperparameters Tensors
with tf.name_scope("Parameters"):
self.learning_rate = tf.placeholder(tf.float32,
name="learning_rate")
self.momentum = tf.placeholder(tf.float32,
name="momentum")
self.input_keep_probability = tf.placeholder(tf.float32,
name="input_keep_probability")
self.output_keep_probability = tf.placeholder(tf.float32,
name="output_keep_probability")
self.is_training = tf.placeholder(tf.bool)
# Define input, output and initialization Tensors
with tf.name_scope("Input"):
self.inputs = tf.placeholder("float", [None,
self.model_parameters.sequence_length,
self.model_parameters.input_dimension],
name='input_placeholder')
self.targets = tf.placeholder("float", [None,
self.model_parameters.sequence_length,
1],
name='labels_placeholder')
self.init = tf.placeholder(tf.float32, shape=[None,
self.model_parameters.state_size],
name="init")
# Define the TensorFlow RNN computational graph
with tf.name_scope("LSTMRNN_RNN"):
cells = []
# Define the layers
for _ in range(self.model_parameters.n_layers):
if self.model_parameters.model == 'rnn':
cell = BasicRNNCell(self.model_parameters.state_size)
elif self.model_parameters.model == 'gru':
cell = GRUCell(self.model_parameters.state_size)
elif self.model_parameters.model == 'lstm':
cell = BasicLSTMCell(self.model_parameters.state_size, state_is_tuple=True)
elif self.model_parameters.model == 'nas':
cell = NASCell(self.model_parameters.state_size)
else:
raise Exception("model type not supported: {}".format(self.model_parameters.model))
if (self.model_parameters.output_keep_probability < 1.0
or self.model_parameters.input_keep_probability < 1.0):
if self.model_parameters.output_keep_probability < 1.0 :
cell = DropoutWrapper(cell,
output_keep_prob=self.output_keep_probability)
if self.model_parameters.input_keep_probability < 1.0 :
cell = DropoutWrapper(cell,
input_keep_prob=self.input_keep_probability)
cells.append(cell)
cell = MultiRNNCell(cells)
# Simulate time steps and get RNN cell output
self.outputs, self.next_state = tf.nn.dynamic_rnn(cell, self.inputs, dtype = tf.float32)
# Define cost Tensors
with tf.name_scope("LSTMRNN_Cost"):
# Flatten to apply same weights to all time steps
self.flattened_outputs = tf.reshape(self.outputs, [-1,
self.model_parameters.state_size],
name="flattened_outputs")
self.output_w = tf.Variable(tf.truncated_normal([
self.model_parameters.state_size,
1], stddev=0.01),
name="output_weights")
self.variable_summaries(self.output_w, 'output_weights')
self.output_b = tf.Variable(tf.constant(0.1),
name="output_biases")
self.variable_summaries(self.output_w, 'output_biases')
# Define decision threshold Tensor
self.decision_threshold = tf.Variable(self.model_parameters.threshold,
name="decision_threshold")
# Define moving average step Tensor
self.ma_step = tf.Variable(self.model_parameters.ma_step,
name="ma_step")
# Softmax activation layer, using RNN inner loop last output
# logits and labels must have the same shape [batch_size, num_classes]
self.logits = tf.add(tf.matmul(self.flattened_outputs, self.output_w),
self.output_b,
name="logits")
self.logits_bn = self.batch_norm_wrapper(inputs=self.logits,
is_training=self.is_training)
tf.summary.histogram('logits', self.logits)
tf.summary.histogram('logits_bn', self.logits_bn)
self.predictions = tf.reshape(self.logits,
[-1, self.model_parameters.sequence_length, 1],
name="predictions")
self.shaped_predictions = tf.reshape(self.predictions,
[-1],
name="shaped_predictions")
self.tmp_smoothed_predictions = tf.concat([self.shaped_predictions,
tf.fill(tf.expand_dims(self.ma_step-1, 0), self.shaped_predictions[tf.shape(self.shaped_predictions)[0]-1])],
axis=0,
name="tmp_smoothed_predictions")
self.ma_loop_idx = tf.constant(0, dtype='int32')
self.shaped_smoothed_predictions = tf.zeros([0], dtype='float32')
_, self.shaped_smoothed_predictions = tf.while_loop(lambda i, _: i < tf.shape(self.shaped_predictions)[0],
self.ma_while_body,
[self.ma_loop_idx, self.shaped_smoothed_predictions],
shape_invariants=[tf.TensorShape([]),
tf.TensorShape([None])])
self.smoothed_predictions = tf.reshape(self.shaped_smoothed_predictions,
[-1, self.model_parameters.sequence_length, 1],
name="smoothed_predictions")
self.soft_predictions_summary = tf.summary.tensor_summary("soft_predictions", self.smoothed_predictions)
# self.soft_predictions_summary = tf.summary.tensor_summary("soft_predictions", self.predictions)
# self.shaped_logits = tf.reshape(self.logits,
# [-1, self.model_parameters.sequence_length, 1],
# name="shaped_logits")
# Cross-Entropy
# self.cost = tf.reduce_mean(-tf.reduce_sum(
# self.targets * tf.log(self.predictions),
# reduction_indices=[2]), name="cross_entropy")
# self.cross_entropy = tf.reduce_mean(
# tf.nn.sigmoid_cross_entropy_with_logits(_sentinel=None,
# labels=self.targets,
# logits=self.predictions),
# name="cross_entropy")
# self.cross_entropy = tf.nn.sigmoid_cross_entropy_with_logits(
# _sentinel=None,
# labels=self.targets,
# logits=self.shaped_logits,
# name="cross_entropy")
# Root Mean Squared Error
# self.mean_squared_error = tf.losses.mean_squared_error(
# labels=self.targets,
# predictions=self.predictions)
self.cost = tf.sqrt(tf.reduce_mean(
tf.squared_difference(
self.smoothed_predictions, self.targets)))
# self.cost = tf.sqrt(tf.reduce_mean(
# tf.squared_difference(
# self.predictions, self.targets)))
tf.summary.scalar('training_cost', self.cost)
# self.cost = tf.reduce_mean(
# self.cross_entropy,
# name="cost")
voicing_condition = tf.greater(self.smoothed_predictions,
tf.fill(tf.shape(self.smoothed_predictions), self.decision_threshold),
name="thresholding")
# voicing_condition = tf.greater(self.predictions,
# tf.fill(tf.shape(self.predictions), self.decision_threshold),
# name="thresholding")
self.label_predictions = tf.where(voicing_condition,
tf.ones_like(self.smoothed_predictions) ,
tf.zeros_like(self.smoothed_predictions),
name="label_predictions")
# self.label_predictions = tf.where(voicing_condition,
# tf.ones_like(self.predictions) ,
# tf.zeros_like(self.predictions),
# name="label_predictions")
self.hard_predictions_summary = tf.summary.tensor_summary("hard_predictions", self.label_predictions)
self.correct_prediction = tf.equal(self.label_predictions,
self.targets,
name="correct_predictions")
self.r = tf.reshape(self.targets, [-1])
self.h = tf.reshape(self.label_predictions, [-1])
# Defined outside the while loop to avoid problems
self.dump_one = tf.constant(1, dtype=tf.int32, shape=[])
self.temp_pk_miss = tf.Variable([0], tf.int32, name='temp_pk_miss')
self.temp_pk_falsealarm = tf.Variable([0], tf.int32, name='temp_pk_falsealarm')
self.loop_idx = tf.constant(0, dtype=tf.int32, name='loop_idx')
self.loop_vars = self.loop_idx, self.temp_pk_miss, self.temp_pk_falsealarm
_, self.all_temp_pk_miss, self.all_temp_pk_falsealarm = tf.while_loop(
self.while_condition,
self.while_body,
self.loop_vars,
shape_invariants=(self.loop_idx.get_shape(), tf.TensorShape([None]), tf.TensorShape([None])))
self.pk_miss = tf.reduce_mean(
tf.cast(self.all_temp_pk_miss, tf.float32))
tf.summary.scalar('p_miss', self.pk_miss)
self.pk_falsealarm = tf.reduce_mean(
tf.cast(self.all_temp_pk_falsealarm, tf.float32))
tf.summary.scalar('p_falsealarm', self.pk_falsealarm)
self.pk = tf.reduce_mean(
tf.cast(
tf.add(self.all_temp_pk_miss, self.all_temp_pk_falsealarm),
tf.float32),
name='pk')
tf.summary.scalar('pk', self.pk)
self.accuracy = tf.reduce_mean(tf.cast(self.correct_prediction, tf.float32),
name="accuracy")
tf.summary.scalar('accuracy', self.accuracy)
self.recall, self.update_op_recall = tf.metrics.recall(
labels=self.targets,
predictions=self.label_predictions,
name="recall")
tf.summary.scalar('recall', self.recall)
self.precision, self.update_op_precision = tf.metrics.precision(
labels=self.targets,
predictions=self.label_predictions,
name="precision")
tf.summary.scalar('precision', self.precision)
# Define Training Tensors
with tf.name_scope("LSTMRNN_Train"):
# Momentum optimisation
self.optimizer = tf.train.MomentumOptimizer(learning_rate=self.learning_rate,
momentum=self.momentum,
name="optimizer")
self.train_step = self.optimizer.minimize(self.cost,
name="train_step")
# Initializing the variables
self.initializer = tf.group(tf.global_variables_initializer(),
tf.local_variables_initializer())