def test_do_gunzip(self):
'test do_gunzip'
zipfile = testutil.datafile('test.gz')
outfile = testutil.tempdatafile('test4.out')
do_gunzip(zipfile, outfile)
h = testutil.get_file_md5(outfile)
self.assertEqual(h.hexdigest(), '1db5a21a01ba465fd26c3203d6589b0e')
def test_run_gunzip(self):
'test uncompress_file gunzip'
zipfile = testutil.datafile('test.gz')
outfile = testutil.tempdatafile('test3.out')
uncompress_file(zipfile, newpath=outfile)
h = testutil.get_file_md5(outfile)
self.assertEqual(h.hexdigest(), '1db5a21a01ba465fd26c3203d6589b0e')
def test_do_unzip(self):
'test do_unzip'
zipfile = testutil.datafile('test.zip')
outfile = testutil.tempdatafile('test2.out')
do_unzip(zipfile, outfile, singleFile=True)
h = testutil.get_file_md5(outfile)
self.assertEqual(h.hexdigest(), '12ada4c51ccb4c7277c16f1a3c000b90')
def test_run_unzip(self):
'test uncompress_file unzip'
zipfile = testutil.datafile('test.zip')
outfile = testutil.tempdatafile('test.out')
uncompress_file(zipfile, newpath=outfile, singleFile=True)
h = testutil.get_file_md5(outfile)
self.assertEqual(h.hexdigest(), '12ada4c51ccb4c7277c16f1a3c000b90')
def test_do_gunzip(self):
"test do_gunzip"
zipfile = testutil.datafile("test.gz")
outfile = testutil.tempdatafile("test4.out")
do_gunzip(zipfile, outfile)
h = testutil.get_file_md5(outfile)
self.assertEqual(h.hexdigest(), "1db5a21a01ba465fd26c3203d6589b0e")
def test_download(self):
"Downloading of gzipped file using pygr.Data"
url = SourceURL('http://www.doe-mbi.ucla.edu/~leec/test.gz')
url.__doc__ = 'test download'
worldbase.add_resource('Bio.Test.Download1', url)
worldbase.commit()
# performs the download
fpath = worldbase.Bio.Test.Download1()
h = testutil.get_file_md5(fpath)
self.assertEqual(h.hexdigest(), 'f95656496c5182d6cff9a56153c9db73')
os.remove(fpath)
def test_download(self):
"Downloading of gzipped file using pygr.Data"
url = SourceURL('http://www.doe-mbi.ucla.edu/~leec/test.gz')
url.__doc__ = 'test download'
pygr.Data.addResource('Bio.Test.Download1', url)
pygr.Data.save()
# performs the download
fpath = pygr.Data.Bio.Test.Download1()
h = testutil.get_file_md5(fpath)
self.assertEqual(h.hexdigest(), 'f95656496c5182d6cff9a56153c9db73')
os.remove(fpath)
def test_download(self):
"Downloading of gzipped file using metabase"
url = SourceURL("http://www.doe-mbi.ucla.edu/~leec/test.gz")
url.__doc__ = "test download"
self.metabase.add_resource("Bio.Test.Download1", url)
self.metabase.commit()
# performs the download
fpath = self.pygrData.Bio.Test.Download1()
h = testutil.get_file_md5(fpath)
self.assertEqual(h.hexdigest(), "f95656496c5182d6cff9a56153c9db73")
os.remove(fpath)