def test_list_field_from_db_value(self, mock_tp):
ret = ListField()
ret.from_db_value(value='foo',
expression='exp',
connection='con',
context='ctx')
mock_tp.assert_called_with('foo')
def test_list_field_clean(self, mock_sc, mock_gpv):
ret = ListField()
input_value = 'foo'
input_model_instance = mock.MagicMock()
output = mock_sc.return_value
ret.clean(value=input_value, model_instance=input_model_instance)
mock_sc.assert_called_with(input_value, input_model_instance)
mock_gpv.assert_called_with(output)
def test_list_field_clean(self, mock_sc, mock_gpv):
ret = ListField()
input_value = 'foo'
input_model_instance = mock.MagicMock()
output = mock_sc.return_value
ret.clean(value=input_value, model_instance=input_model_instance)
mock_sc.assert_called_with(input_value, input_model_instance)
mock_gpv.assert_called_with(output)
def test_list_field_value_to_string(self, mock_gpvo, mock_gpv):
ret = ListField()
output = mock_gpvo.return_value
mock_obj = mock.MagicMock()
ret.value_to_string(obj=mock_obj)
mock_gpvo.assert_called_with(mock_obj)
mock_gpv.assert_called_with(output)
def test_list_field_value_to_string(self, mock_gpvo, mock_gpv):
ret = ListField()
output = mock_gpvo.return_value
mock_obj = mock.MagicMock()
ret.value_to_string(obj=mock_obj)
mock_gpvo.assert_called_with(mock_obj)
mock_gpv.assert_called_with(output)
class TethysApp(models.Model):
"""
DB Model for Tethys Apps
"""
# The package is enforced to be unique by the file system
package = models.CharField(max_length=200, unique=True, default='')
# Portal admin first attributes
name = models.CharField(max_length=200, default='')
description = models.TextField(max_length=1000, blank=True, default='')
enable_feedback = models.BooleanField(default=False)
feedback_emails = ListField(default='', blank=True)
tags = models.CharField(max_length=200, blank=True, default='')
# Developer first attributes
index = models.CharField(max_length=200, default='')
icon = models.CharField(max_length=200, default='')
root_url = models.CharField(max_length=200, default='')
color = models.CharField(max_length=10, default='')
# Portal admin only attributes
enabled = models.BooleanField(default=True)
show_in_apps_library = models.BooleanField(default=True)
class Meta:
permissions = (
('view_app', 'Can see app in library'),
('access_app', 'Can access app'),
)
verbose_name = 'Tethys App'
verbose_name_plural = 'Installed Apps'
def __unicode__(self):
return unicode(self.name)
def test_tethys_apps_context_feedback(self, mock_get_active_app):
mock_args = mock.MagicMock()
app = TethysApp()
app.id = 'foo.id'
app.name = models.CharField(max_length=200, default='')
app.name.value = 'foo.name'
app.icon = models.CharField(max_length=200, default='')
app.icon.value = 'foo.icon'
app.color = models.CharField(max_length=10, default='')
app.color.value = '#foobar'
app.tags = models.CharField(max_length=200, blank=True, default='')
app.tags.value = 'tags'
app.description = models.TextField(max_length=1000, blank=True, default='')
app.description.value = 'foo.description'
app.enable_feedback = models.BooleanField(default=True)
app.enable_feedback.value = True
app.feedback_emails = ListField(default='', blank=True)
app.feedback_emails.append('foo.feedback')
mock_get_active_app.return_value = app
context = tethys_apps_context(mock_args)
mock_get_active_app.assert_called_once()
self.assertEqual('foo.id', context['tethys_app']['id'])
self.assertEqual('foo.name', context['tethys_app']['name'].value)
self.assertEqual('foo.icon', context['tethys_app']['icon'].value)
self.assertEqual('#foobar', context['tethys_app']['color'].value)
self.assertEqual('tags', context['tethys_app']['tags'].value)
self.assertEqual('foo.description', context['tethys_app']['description'].value)
self.assertTrue('enable_feedback' in context['tethys_app'])
self.assertTrue('feedback_emails' in context['tethys_app'])
self.assertEqual(True, context['tethys_app']['enable_feedback'].value)
self.assertEqual(['foo.feedback'], context['tethys_app']['feedback_emails'])
def test_ListField(self):
ret = ListField()
self.assertEqual('List object', ret.description)
def test_list_field_formfield(self, mock_ff):
ret = ListField()
ret.formfield(additional='test2')
mock_ff.assert_called_once()
def test_list_field_formfield(self, mock_ff):
ret = ListField()
ret.formfield(additional='test2')
mock_ff.assert_called_once()
def test_list_field_get_internal_type(self):
ret = ListField()
self.assertEqual('TextField', ret.get_internal_type())
def test_list_field_get_prep_value_list(self, mock_jd):
ret = ListField()
input_value = ['foo', 'bar']
ret.get_prep_value(value=input_value)
mock_jd.assert_called_with(input_value)
def test_list_field_get_prep_value_list(self, mock_jd):
ret = ListField()
input_value = ['foo', 'bar']
ret.get_prep_value(value=input_value)
mock_jd.assert_called_with(input_value)
def test_list_field_to_python_empty_str(self):
ret = ListField()
self.assertListEqual([], ret.to_python(value=""))
def test_list_field_to_python_dict(self):
ret = ListField()
input_value = {'name': 'bar'}
output = ret.to_python(value=input_value)
self.assertListEqual([], output)
def test_list_field_to_python_str_ValueError(self, mock_jl):
ret = ListField()
mock_jl.side_effect = ValueError
self.assertRaises(ValueError, ret.to_python, value='foo')
def test_list_field_to_python_empty_str(self):
ret = ListField()
self.assertListEqual([], ret.to_python(value=""))
def test_list_field_from_db_value(self, mock_tp):
ret = ListField()
ret.from_db_value(value='foo', expression='exp', connection='con', context='ctx')
mock_tp.assert_called_with('foo')
def test_list_field_to_python_dict(self):
ret = ListField()
input_value = {'name': 'bar'}
output = ret.to_python(value=input_value)
self.assertListEqual([], output)
def test_list_field_to_python_list(self):
ret = ListField()
input_value = ['foo', 'bar']
output = ret.to_python(value=input_value)
self.assertListEqual(input_value, output)
def test_list_field_to_python_str(self, mock_jl):
ret = ListField()
ret.to_python(value='foo')
mock_jl.assert_called_with('foo')
def test_list_field_get_internal_type(self):
ret = ListField()
self.assertEqual('TextField', ret.get_internal_type())
def test_list_field_to_python_none(self):
ret = ListField()
self.assertIsNone(ret.to_python(value=None))
def test_list_field_to_python_none(self):
ret = ListField()
self.assertIsNone(ret.to_python(value=None))
def test_list_field_to_python_str(self, mock_jl):
ret = ListField()
ret.to_python(value='foo')
mock_jl.assert_called_with('foo')
class CondorJob(TethysJob):
"""
Condor job type
"""
executable = models.CharField(max_length=1024)
condorpy_template_name = models.CharField(max_length=1024,
blank=True,
null=True)
attributes = DictionaryField(default='')
remote_input_files = ListField(default='')
cluster_id = models.IntegerField(blank=True, default=0)
num_jobs = models.IntegerField(default=1)
remote_id = models.CharField(max_length=32, blank=True, null=True)
tethys_job = models.OneToOneField(TethysJob)
scheduler = models.ForeignKey(Scheduler, blank=True, null=True)
STATUS_MAP = {
'Unexpanded': 'PEN',
'Idle': 'SUB',
'Running': 'RUN',
'Removed': 'ABT',
'Completed': 'COM',
'Held': 'ERR',
'Submission_err': 'ERR',
'Various': 'VAR',
'Various-Complete': 'VCP',
}
def __init__(self, *args, **kwargs):
kwargs.update({'_subclass': self.__class__.__name__.lower()})
super(self.__class__, self).__init__(*args, **kwargs)
@property
def condorpy_template(self):
if self.condorpy_template_name:
template = getattr(Templates, self.condorpy_template_name)
else:
template = Templates.base
return template
@property
def condorpy_job(self):
if not hasattr(self, '_condorpy_job'):
if 'executable' in self.attributes.keys():
del self.attributes['executable']
if self.scheduler:
host = self.scheduler.host
username = self.scheduler.username
password = self.scheduler.password
private_key = self.scheduler.private_key_path
private_key_pass = self.scheduler.private_key_pass
else:
host = None
username = None
password = None
private_key = None
private_key_pass = None
attributes = dict()
attributes.update(self.attributes)
attributes.pop('remote_input_files', None)
job = Job(name=self.name.replace(' ', '_'),
attributes=self.condorpy_template,
executable=self.executable,
host=host,
username=username,
password=password,
private_key=private_key,
private_key_pass=private_key_pass,
remote_input_files=self.remote_input_files,
working_directory=self.workspace,
**attributes)
job._cluster_id = self.cluster_id
job._num_jobs = self.num_jobs
if self.remote_id:
job._remote_id = self.remote_id
else:
self.remote_id = job._remote_id
self._condorpy_job = job
return self._condorpy_job
@property
def statuses(self):
return self.condorpy_job.statuses
@property
def initial_dir(self):
return os.path.join(self.workspace, self.condorpy_job.initial_dir)
def _update_status(self):
if not self.execute_time:
return 'PEN'
try:
condor_status = self.condorpy_job.status
if condor_status == 'Various':
statuses = self.condorpy_job.statuses
running_statuses = statuses['Unexpanded'] + statuses[
'Idle'] + statuses['Running']
if not running_statuses:
condor_status = 'Various-Complete'
except Exception, e:
# raise e
condor_status = 'Submission_err'
self._status = self.STATUS_MAP[condor_status]
self.save()
def test_list_field_to_python_list(self):
ret = ListField()
input_value = ['foo', 'bar']
output = ret.to_python(value=input_value)
self.assertListEqual(input_value, output)
class CondorPyJob(models.Model):
"""
Database model for condorpy jobs
"""
condorpyjob_id = models.AutoField(primary_key=True)
_attributes = DictionaryField(default='')
_num_jobs = models.IntegerField(default=1)
_remote_input_files = ListField(default='')
@classmethod
def get_condorpy_template(cls, template_name):
template_name = template_name or 'base'
template = getattr(Templates, template_name)
if not template:
template = Templates.base
return template
@property
def condorpy_job(self):
if not hasattr(self, '_condorpy_job'):
job = Job(name=self.name.replace(' ', '_'),
attributes=self.attributes,
num_jobs=self.num_jobs,
remote_input_files=self.remote_input_files,
working_directory=self.workspace)
self._condorpy_job = job
return self._condorpy_job
@property
def attributes(self):
return self._attributes
# @attributes.setter
# def attributes(self, attributes):
# assert isinstance(attributes, dict)
# self.condorpy_job._attributes = attributes
# self._attributes = attributes
@property
def num_jobs(self):
return self._num_jobs
@num_jobs.setter
def num_jobs(self, num_jobs):
num_jobs = int(num_jobs)
self.condorpy_job.num_jobs = num_jobs
self._num_jobs = num_jobs
@property
def remote_input_files(self):
return self._remote_input_files
@remote_input_files.setter
def remote_input_files(self, remote_input_files):
self.condorpy_job.remote_input_files = remote_input_files
self._remote_input_files = remote_input_files
@property
def initial_dir(self):
return os.path.join(self.workspace, self.condorpy_job.initial_dir)
def get_attribute(self, attribute):
self.condorpy_job.get(attribute)
def set_attribute(self, attribute, value):
setattr(self.condorpy_job, attribute, value)
def update_database_fields(self):
self._attributes = self.condorpy_job.attributes
self.num_jobs = self.condorpy_job.num_jobs
self.remote_input_files = self.condorpy_job.remote_input_files
class TethysApp(models.Model, TethysBaseMixin):
"""
DB Model for Tethys Apps
"""
# The package is enforced to be unique by the file system
package = models.CharField(max_length=200, unique=True, default='')
# Portal admin first attributes
name = models.CharField(max_length=200, default='')
description = models.TextField(max_length=1000, blank=True, default='')
enable_feedback = models.BooleanField(default=False)
feedback_emails = ListField(default='', blank=True)
tags = models.CharField(max_length=200, blank=True, default='')
# Developer first attributes
index = models.CharField(max_length=200, default='')
icon = models.CharField(max_length=200, default='')
root_url = models.CharField(max_length=200, default='')
color = models.CharField(max_length=10, default='')
# Portal admin only attributes
enabled = models.BooleanField(default=True)
show_in_apps_library = models.BooleanField(default=True)
class Meta:
permissions = (
('view_app', 'Can see app in library'),
('access_app', 'Can access app'),
)
verbose_name = 'Tethys App'
verbose_name_plural = 'Installed Apps'
def __str__(self):
return self.name
def add_settings(self, setting_list):
"""
Associate setting with app in database
"""
if setting_list is not None:
for setting in setting_list:
# Don't add the same setting twice
if self.settings_set.filter(name=setting.name):
return
# Associate setting with this app
setting.tethys_app = self
setting.save()
@property
def settings(self):
return self.settings_set.select_subclasses()
@property
def custom_settings(self):
return self.settings_set.exclude(customsetting__isnull=True) \
.select_subclasses('customsetting')
@property
def dataset_service_settings(self):
return self.settings_set.exclude(datasetservicesetting__isnull=True) \
.select_subclasses('datasetservicesetting')
@property
def spatial_dataset_service_settings(self):
return self.settings_set.exclude(spatialdatasetservicesetting__isnull=True) \
.select_subclasses('spatialdatasetservicesetting')
@property
def wps_services_settings(self):
return self.settings_set.exclude(webprocessingservicesetting__isnull=True) \
.select_subclasses('webprocessingservicesetting')
@property
def persistent_store_connection_settings(self):
return self.settings_set.exclude(persistentstoreconnectionsetting__isnull=True) \
.select_subclasses('persistentstoreconnectionsetting')
@property
def persistent_store_database_settings(self):
return self.settings_set.exclude(persistentstoredatabasesetting__isnull=True) \
.select_subclasses('persistentstoredatabasesetting')
@property
def configured(self):
required_settings = [s for s in self.settings if s.required]
for setting in required_settings:
try:
if setting.get_value() is None:
return False
except TethysAppSettingNotAssigned:
return False
return True
def test_list_field_get_prep_value_str(self):
ret = ListField()
self.assertEqual('foo', ret.get_prep_value(value='foo'))
class CondorPyJob(models.Model):
"""
Database model for condorpy jobs
"""
condorpyjob_id = models.AutoField(primary_key=True)
_attributes = DictionaryField(default='')
_num_jobs = models.IntegerField(default=1)
_remote_input_files = ListField(default='')
def __init__(self, *args, **kwargs):
# if condorpy_template_name or attributes is passed in then get the template and add it to the _attributes
attributes = kwargs.pop('attributes', dict())
_attributes = kwargs.get('_attributes', dict())
attributes.update(_attributes)
condorpy_template_name = kwargs.pop('condorpy_template_name', None)
if condorpy_template_name is not None:
template = self.get_condorpy_template(condorpy_template_name)
template.update(attributes)
attributes = template
kwargs['_attributes'] = attributes
super(CondorPyJob, self).__init__(*args, **kwargs)
@classmethod
def get_condorpy_template(cls, template_name):
template_name = template_name or 'base'
template = getattr(Templates, template_name, None)
if not template:
template = Templates.base
return template
@property
def condorpy_job(self):
if not hasattr(self, '_condorpy_job'):
job = Job(name=self.name.replace(' ', '_'),
attributes=self.attributes,
num_jobs=self.num_jobs,
remote_input_files=self.remote_input_files,
working_directory=self.workspace)
self._condorpy_job = job
return self._condorpy_job
@property
def attributes(self):
return self._attributes
@attributes.setter
def attributes(self, attributes):
assert isinstance(attributes, dict)
self._attributes = attributes
self.condorpy_job._attributes = attributes
@property
def num_jobs(self):
return self._num_jobs
@num_jobs.setter
def num_jobs(self, num_jobs):
num_jobs = int(num_jobs)
self.condorpy_job.num_jobs = num_jobs
self._num_jobs = num_jobs
@property
def remote_input_files(self):
return self._remote_input_files
@remote_input_files.setter
def remote_input_files(self, remote_input_files):
self.condorpy_job.remote_input_files = remote_input_files
self._remote_input_files = remote_input_files
@property
def initial_dir(self):
return os.path.join(self.workspace, self.condorpy_job.initial_dir)
def get_attribute(self, attribute):
return self.condorpy_job.get(attribute)
def set_attribute(self, attribute, value):
setattr(self.condorpy_job, attribute, value)
def update_database_fields(self):
self._attributes = self.condorpy_job.attributes
self.num_jobs = self.condorpy_job.num_jobs
self.remote_input_files = self.condorpy_job.remote_input_files
def test_list_field_get_prep_value_str(self):
ret = ListField()
self.assertEqual('foo', ret.get_prep_value(value='foo'))
