Exemplo n.º 1
0
def normalisation() :
    
    global first, second, random_seed

    first=str(nanoseconds())[for_ref:for_ref+decimal_places:1].zfill(8)
    second=str(nanoseconds())[back_ref+decimal_places:back_ref:-1].zfill(8)

    random_seed=str(random_seed).zfill(4)[0:4:1]    #user seed string, padded to 4 zeros.

    return
Exemplo n.º 2
0
def find_refs() :
    
    global for_ref, back_ref, decimal_places
    
    samp_zeros=0 ; sample_size=12
    decimal_places=8
    reference_length=len(str(nanoseconds()))

    for samp_loops in range(sample_size) :
        sample1=str(nanoseconds()); sample2=str(nanoseconds())
        while sample1==sample2 :
            sample2=str(nanoseconds())
        sample2=sample2.rstrip('0')
        samp_zeros=samp_zeros+(len(sample1)-len(sample2))
    
    reference_zeros=int(samp_zeros/sample_size)
    for_ref=reference_length-(decimal_places+reference_zeros)
    back_ref=-(reference_zeros+decimal_places+1)
    
    return
Exemplo n.º 3
0
  def store_index(self, time, index) :
      """Store information about:
         * Time-satmp
         * Total intensity
         * Beam center
         * Estimated Particle Size
         * Estimated particle nr

      """

      self.tot_t[index]         = time.time()
      self.tot_s[index]         = time.seconds()
      self.tot_ns[index]        = time.nanoseconds()
      self.tot_fd[index]        = time.fiducial()

      self.tot_int[index]       = float(self.img.sum())
      self.tot_cx[index]        = self.cent[0]
      self.tot_cy[index]        = self.cent[1]
      self.tot_size[index]      = self.radius
      self.tot_score[index]     = self.score

      self.ave                 += self.img
Exemplo n.º 4
0
  def store_index(self, time, index, flag = 1) :
      """Store information about:
         * Time-stamp
         * Total intensity
         * Beam center
         * Estimated Particle Size
         * Estimated particle nr

      """

      if not hasattr(self, 'streak_m'):
         self.streak_m    = 0
      if not hasattr(self, 'streak_s'):
         self.streak_s    = 0


      self.tot_t[index]         = time.time()
      self.tot_s[index]         = time.seconds()
      self.tot_ns[index]        = time.nanoseconds()
      self.tot_fd[index]        = time.fiducial()

      self.tot_int[index]       = float(self.img.sum())

      if (self.peak is not None):
          self.tot_peak1_int[index] = self.peak1
          self.tot_peak2_int[index] = self.peak2

      self.tot_streak_m[index]  = self.streak_m
      self.tot_streak_s[index]  = self.streak_s

      self.tot_cx[index]        = self.cent[0]
      self.tot_cy[index]        = self.cent[1]
      self.tot_size[index]      = self.radius
      self.tot_score[index]     = self.score

      if flag :
         self.ave                  += self.img
Exemplo n.º 5
0
  def store_index(self, time, index, flag = 1) :
      """Store information about:
         * Time-stamp
         * Total intensity
         * Beam center
         * Estimated Particle Size
         * Estimated particle nr

      """

      if not hasattr(self, 'streak_m'):
         self.streak_m    = 0
      if not hasattr(self, 'streak_s'):
         self.streak_s    = 0


      self.tot_t[index]         = time.time()
      self.tot_s[index]         = time.seconds()
      self.tot_ns[index]        = time.nanoseconds()
      self.tot_fd[index]        = time.fiducial()

      self.tot_int[index]       = float(self.img.sum())

      if (self.peak is not None):
          self.tot_peak1_int[index] = self.peak1
          self.tot_peak2_int[index] = self.peak2

      self.tot_streak_m[index]  = self.streak_m
      self.tot_streak_s[index]  = self.streak_s

      self.tot_cx[index]        = self.cent[0]
      self.tot_cy[index]        = self.cent[1]
      self.tot_size[index]      = self.radius
      self.tot_score[index]     = self.score

      if flag :
         self.ave                  += self.img
Exemplo n.º 6
0
    def store_index2(self, time, index, flag=1):
        """Store information about:
         * Time-stamp
         * Total intensity
         * Beam center
         * Estimated Particle Size
         * Estimated particle nr

      """

        self.tot_t[index] = time.time()
        self.tot_s[index] = time.seconds()
        self.tot_ns[index] = time.nanoseconds()
        self.tot_fd[index] = time.fiducial()

        self.tot_int[index] = float(self.image.sum())

        self.tot_cx[index] = self.cent[0]
        self.tot_cy[index] = self.cent[1]
        self.tot_size[index] = self.radius
        self.tot_score[index] = self.score

        if flag:
            self.ave += self.image
Exemplo n.º 7
0
def nano_hop() :
    
    sample1=str(nanoseconds()); sample2=str(nanoseconds())
    while sample1==sample2 :
        sample2=str(nanoseconds())
    return