def test_models():
sheet_dsets, specs = three_faces_sheet()
sheet = Sheet("test", sheet_dsets, specs)
mono = Monolayer.from_flat_sheet("test", sheet,
config.geometry.bulk_spec())
testing.model_tester(mono, BulkModel)
testing.model_tester(mono, BulkModelwithFreeBorders)
def test_model():
h5store = os.path.join(stores_dir, "small_hexagonal.hf5")
datasets = load_datasets(h5store, data_names=["face", "vert", "edge"])
specs = config.geometry.cylindrical_sheet()
sheet = Sheet("emin", datasets, specs)
model_tester(sheet, model)
model_tester(sheet, PlanarModel)
flat = Sheet.planar_sheet_2d("flat", 5, 5, 1, 1)
flat.sanitize()
PlanarGeometry.update_all(flat)
model_tester(flat, PlanarModel)
def test_models():
sheet_dsets, specs = three_faces_sheet()
sheet = Sheet("test", sheet_dsets, specs)
mono = Monolayer.from_flat_sheet("test", sheet,
config.geometry.bulk_spec())
testing.model_tester(mono, BulkModel)
testing.model_tester(mono, BulkModelwithFreeBorders)
datasets = load_datasets(
Path(stores_dir) / "small_ellipsoid.hf5",
data_names=["vert", "edge", "face", "cell"],
)
specs = config.geometry.bulk_spec()
monolayer = Monolayer("ell", datasets, specs)
testing.model_tester(mono, ClosedMonolayerModel)
def test_model():
sheet_dsets, specs = three_faces_sheet()
sheet = Sheet("test", sheet_dsets, specs)
model_tester(sheet, SheetApoptosisModel)