def test_effector():
sheet_dsets, specs = three_faces_sheet()
sheet = Sheet("test", sheet_dsets, specs)
mono = Monolayer.from_flat_sheet("test", sheet,
config.geometry.bulk_spec())
testing.effector_tester(mono, BorderElasticity)
def test_models():
sheet_dsets, specs = three_faces_sheet()
sheet = Sheet("test", sheet_dsets, specs)
mono = Monolayer.from_flat_sheet("test", sheet,
config.geometry.bulk_spec())
testing.model_tester(mono, BulkModel)
testing.model_tester(mono, BulkModelwithFreeBorders)
def test_effectors():
sheet_dsets, specs = three_faces_sheet()
sheet = Sheet("test", sheet_dsets, specs)
mono = Monolayer.from_flat_sheet("test", sheet, config.geometry.bulk_spec())
for effector in sheet_effectors:
testing.effector_tester(sheet, effector)
for effector in bulk_effectors:
testing.effector_tester(mono, effector)
def test_monolayer():
sheet = Sheet("test", *three_faces_sheet())
mono = Monolayer.from_flat_sheet("test", sheet, config.geometry.bulk_spec())
assert_array_equal(mono.apical_verts.values, np.arange(13))
assert_array_equal(mono.basal_verts.values, np.arange(13) + 13)
assert_array_equal(mono.apical_edges.values, np.arange(18))
assert_array_equal(mono.basal_edges.values, np.arange(18) + 18)
assert_array_equal(mono.lateral_edges.values, np.arange(72) + 36)
assert_array_equal(mono.apical_faces.values, np.arange(3))
assert_array_equal(mono.basal_faces.values, np.arange(3) + 3)
assert_array_equal(mono.lateral_faces.values, np.arange(18) + 6)
def test_models():
sheet_dsets, specs = three_faces_sheet()
sheet = Sheet("test", sheet_dsets, specs)
mono = Monolayer.from_flat_sheet("test", sheet,
config.geometry.bulk_spec())
testing.model_tester(mono, BulkModel)
testing.model_tester(mono, BulkModelwithFreeBorders)
datasets = load_datasets(
Path(stores_dir) / "small_ellipsoid.hf5",
data_names=["vert", "edge", "face", "cell"],
)
specs = config.geometry.bulk_spec()
monolayer = Monolayer("ell", datasets, specs)
testing.model_tester(mono, ClosedMonolayerModel)