def test_param_from_dict_and_to_dict_give_the_same_dict():
params = {"k1": 10, "eccentricity": 0.5, "period": 5, "mean_val": 4, "tau": 1, "omega": 1,
"m1": 4, "m2": 6, "k2": 100, "name": "test", "ignore_mean": True}
rv1 = RV.from_dict(params)
rv1_params = rv1.to_dict()
assert params == rv1_params
assert params == rv1._params
assert rv1_params == rv1._params
rv2 = RV.from_dict(rv1_params)
assert rv2 == rv1
def test_from_dict_works_properly():
params = {"k1": 10, "eccentricity": 0.5, "period": 5, "mean_val": 4, "tau": 1, "omega": 1, "m1": 4, "m2": 6}
rv = RV.from_dict(params)
assert rv._params.get("other_params") is None
assert rv._params.get("m1") == 4
assert rv._params.get("m2") == 6
def test_initalize_rv_class_from_dict():
params = {"k1": 1, "period": 2, "tau": 5000, "omega": 1, "eccentricity": 0.5, "mean_val": 5}
rv = RV.from_dict(params)
assert rv.semi_amp == params["k1"]
assert rv.period == params["period"]
assert rv.ecc == params["eccentricity"]
assert rv.tau == params["tau"]
assert rv.gamma == params["mean_val"]
assert rv.omega == params["omega"]
def main(params,
mode="phase",
obs_times=None,
obs_list=None,
date=None,
cycle_fraction=1,
phase_center=0,
save_only=False): # obs_times=None, mode='phase', rv_diff=None
# type: (Dict[str, Union[str, float]], str, List[str], str, str, bool) -> None
r"""Radial velocity displays.
Parameters
----------
params: str
Filename for text file containing the rv parameters. Format of 'param = value\n'.
mode: str
Mode for script to use. Phase, time, future.
obs_times: list of str
Dates of observations added manually at command line of format YYYY-MM-DD.
obs_list: str
Filename for list which contains obs_times (YYY-MM-DD HH:MM:SS).
date: str
Reference date for some modes. Defaults=None)
"""
# Load in params and store as a dictionary
parameters = parse_paramfile(params)
parameters = prepare_mass_params(parameters, only_msini=True)
parameters = check_core_parameters(parameters)
# combine obs_times and obs_list and turn into jd.
if obs_times:
if (".txt" in obs_times) or (".dat" in obs_times):
raise ValueError("Filename given instead of dates for obs_times.")
obs_times = join_times(obs_times, obs_list)
obs_jd = strtimes2jd(obs_times)
test_jd = obs_jd[0] if isinstance(obs_jd, (list, tuple)) else obs_jd
if ((str(parameters["tau"]).startswith("24")
and not str(test_jd).startswith("24"))
or (not (str(parameters["tau"]).startswith("24"))
and str(test_jd).startswith("24"))):
raise ValueError(
"Mismatch between Tau parameter '{0}' and times used '{1}'.".
format(parameters["tau"], obs_jd))
date_split = JulianDate.now().jd if date is None else JulianDate.from_str(
date).jd
# Slit past and future obs
future_obs = [obs for obs in obs_jd if obs > date_split]
past_obs = [obs for obs in obs_jd if obs <= date_split]
host_orbit = RV.from_dict(parameters)
companion_orbit = host_orbit.create_companion()
if mode == "phase":
fig = binary_phase_curve(host_orbit,
companion_orbit,
t_past=past_obs,
t_future=future_obs,
cycle_fraction=cycle_fraction,
phase_center=phase_center)
elif mode == "time":
fig = binary_time_curve(host_orbit,
companion_orbit,
t_past=past_obs,
start_day=date_split,
t_future=future_obs,
cycle_fraction=cycle_fraction)
else:
raise NotImplementedError("Other modes are not Implemented yet.")
if not save_only:
fig.show()
return fig
def main(params, mode="phase", obs_times=None, obs_list=None, date=None,
cycle_fraction=1, phase_center=0, save_only=False): # obs_times=None, mode='phase', rv_diff=None
# type: (Dict[str, Union[str, float]], str, List[str], str, str, bool) -> None
r"""Radial velocity displays.
Parameters
----------
params: str
Filename for text file containing the rv parameters. Format of 'param = value\n'.
mode: str
Mode for script to use. Phase, time, future.
obs_times: list of str
Dates of observations added manually at command line of format YYYY-MM-DD.
obs_list: str
Filename for list which contains obs_times (YYY-MM-DD HH:MM:SS).
date: str
Reference date for some modes. Defaults=None)
"""
# Load in params and store as a dictionary
parameters = parse_paramfile(params)
parameters = prepare_mass_params(parameters, only_msini=True)
parameters = check_core_parameters(parameters)
# combine obs_times and obs_list and turn into jd.
if obs_times:
if (".txt" in obs_times) or (".dat" in obs_times):
raise ValueError("Filename given instead of dates for obs_times.")
obs_times = join_times(obs_times, obs_list)
obs_jd = strtimes2jd(obs_times)
test_jd = obs_jd[0] if isinstance(obs_jd, (list, tuple)) else obs_jd
if ((str(parameters["tau"]).startswith("24") and not str(test_jd).startswith("24")) or
(not(str(parameters["tau"]).startswith("24")) and str(test_jd).startswith("24"))):
raise ValueError("Mismatch between Tau parameter '{0}' and times used '{1}'.".format(parameters["tau"], obs_jd))
date_split = JulianDate.now().jd if date is None else JulianDate.from_str(date).jd
# Slit past and future obs
future_obs = [obs for obs in obs_jd if obs > date_split]
past_obs = [obs for obs in obs_jd if obs <= date_split]
host_orbit = RV.from_dict(parameters)
companion_orbit = host_orbit.create_companion()
if mode == "phase":
fig = binary_phase_curve(host_orbit, companion_orbit, t_past=past_obs,
t_future=future_obs,
cycle_fraction=cycle_fraction,
phase_center=phase_center)
elif mode == "time":
fig = binary_time_curve(host_orbit, companion_orbit, t_past=past_obs,
start_day=date_split, t_future=future_obs,
cycle_fraction=cycle_fraction)
else:
raise NotImplementedError("Other modes are not Implemented yet.")
if not save_only:
fig.show()
return fig