def parse_config_file(path):
"""Parse INI file containing configuration details.
"""
# Parse options file
parser = SafeConfigParser(defaults=DEFAULTS)
with open(path, 'r') as fp:
parser.readfp(fp)
# Build a list of label named tuples
ignore_sections = ['options', 'auth', 'connection']
sections = [s for s in parser.sections() if s not in ignore_sections]
labels = [
make_label(sec, parser.get(sec, 'min'), parser.get(sec, 'max'))
for sec in sections
]
# Build an options object and return it
opts = dict(
folder=parser.get('options', 'folder'),
user=parser.get('auth', 'user'),
password=parser.get('auth', 'password'),
host=parser.get('connection', 'host'),
ssl=parser.getboolean('connection', 'ssl'),
port=parser.getint('connection', 'port'),
labels=labels,
)
return opts
def get_input(debug=True):
"""
得到Bert模型的输入
"""
input_word_list = []
input_label_list = []
with open("tmp/input_bert.json", 'r', encoding='UTF-8') as f:
data = json.load(f)
bert_words = list(data["sentence"])
label_list = ["O" for _ in bert_words] # 首先制作全O的标签
for entity in data["entity-mentions"]:
en_start = entity["start"]
en_end = entity["end"]
en_type = entity["entity-type"]
# 根据开始与结束位置打标签
make_label(en_start, en_end, en_type, label_list)
input_word_list.append(["[CLS]"] + bert_words + ["[SEP]"])
input_label_list.append(["O"] + label_list + ["O"])
return input_word_list, input_label_list
def make_classifier(self, save=True):
data = self.data.copy()
data_for_training = utils.simple_feature_engineer(data)
data_for_training, label = utils.make_label(data_for_training)
logreg = LogisticRegression()
logreg.fit(data_for_training, label)
if save:
name = self.symbol + '_clf.pkl'
path = config.path_to_clf + name
with open(path, 'wb') as f:
pkl.dump(logreg, f)
self.clf = logreg
return
def create_raw_training_data(ticker, feature_path, label_path, features, label,
min_date, max_date, regression, fp):
feature_map = read_data(feature_path, min_date, max_date)
label_map = read_data(label_path, min_date, max_date)
count = 0
for d in sorted(feature_map.keys() & label_map.keys(), reverse=True):
if label not in label_map[d]: continue
ok = True
for f in features:
if f not in feature_map[d]:
ok = False
break
if not ok: continue
items = [ticker, d, utils.make_label(label_map[d][label], regression)]
for i in range(len(features)):
items.append('%d:%f' % (i + 1, feature_map[d][features[i]]))
print(' '.join(items), file=fp)
count += 1
logging.info('%d data points' % count)
def create_raw_training_data(ticker, feature_path, label_path, features, label,
min_date, max_date, regression, fp):
feature_map = read_data(feature_path, min_date, max_date)
label_map = read_data(label_path, min_date, max_date)
count = 0
for d in sorted(feature_map.keys() & label_map.keys(), reverse=True):
if label not in label_map[d]: continue
ok = True
for f in features:
if f not in feature_map[d]:
ok = False
break
if not ok: continue
items = [ticker, d, utils.make_label(label_map[d][label], regression)]
for i in range(len(features)):
items.append('%d:%f' % (i+1, feature_map[d][features[i]]))
print(' '.join(items), file=fp)
count += 1
logging.info('%d data points' % count)
def main():
parser = argparse.ArgumentParser()
parser.add_argument('--input_path', required=True)
parser.add_argument('--output_data_path', required=True)
parser.add_argument('--output_index_path', required=True)
parser.add_argument('--verbose', action='store_true')
args = parser.parse_args()
utils.setup_logging(args.verbose)
with open(args.input_path, 'r') as fp:
lines = fp.read().splitlines()
# This block below is to keep the output data in sync with the ones
# produced by split_data_for_cv.py. I.e. the date and ticker of each
# input line are swapped (such that date goes before ticker), and the
# lines are sorted (by date and then by ticker).
# Swap date and ticker in place.
item_count = -1
for i in range(len(lines)):
items = lines[i].split(' ')
if item_count < 0: item_count = len(items)
else: assert item_count == len(items)
items[0], items[1] = items[1], items[0]
lines[i] = ' '.join(items)
# This will sort lines by entry and then ticker.
lines.sort()
data_fp = open(args.output_data_path, 'w')
index_fp = open(args.output_index_path, 'w')
for line in lines:
items = line.split(' ')
assert len(items) > 3
data = '%s %s' % (utils.make_label(float(items[2]), False),
' '.join(items[3:]))
index = ' '.join(items[:2])
print(data, file=data_fp)
print(index, file=index_fp)
data_fp.close()
index_fp.close()
def main():
parser = argparse.ArgumentParser()
parser.add_argument('--input_path', required=True)
parser.add_argument('--output_data_path', required=True)
parser.add_argument('--output_index_path', required=True)
parser.add_argument('--verbose', action='store_true')
args = parser.parse_args()
utils.setup_logging(args.verbose)
with open(args.input_path, 'r') as fp:
lines = fp.read().splitlines()
# This block below is to keep the output data in sync with the ones
# produced by split_data_for_cv.py. I.e. the date and ticker of each
# input line are swapped (such that date goes before ticker), and the
# lines are sorted (by date and then by ticker).
# Swap date and ticker in place.
item_count = -1
for i in range(len(lines)):
items = lines[i].split(' ')
if item_count < 0: item_count = len(items)
else: assert item_count == len(items)
items[0], items[1] = items[1], items[0]
lines[i] = ' '.join(items)
# This will sort lines by entry and then ticker.
lines.sort()
data_fp = open(args.output_data_path, 'w')
index_fp = open(args.output_index_path, 'w')
for line in lines:
items = line.split(' ')
assert len(items) > 3
data = '%s %s' % (utils.make_label(float(items[2]), False), ' '.join(
items[3:]))
index = ' '.join(items[:2])
print(data, file=data_fp)
print(index, file=index_fp)
data_fp.close()
index_fp.close()
def get_segy_pts(data_dir, cube_incr, save_dir=None, save=False, pred=False):
files = os.listdir(data_dir)
pts_files = list()
for f in files:
full_filename = os.path.join(data_dir, f)
ext = os.path.splitext(full_filename)[-1]
if ext == '.pts':
pts_files.append(full_filename)
elif ext == '.segy':
segy_files = full_filename
else:
raise ValueError('%s type is not a data format' % ext)
pts_files.sort()
print('Point files', pts_files)
segy_obj = utils.segy_decomp(segy_files, plot_data=False, inp_res = np.float32)
# Define the buffer zone around the edge of the cube that defines the legal/illegal adresses
inl_min = segy_obj.inl_start + segy_obj.inl_step*cube_incr
inl_max = segy_obj.inl_end - segy_obj.inl_step*cube_incr
xl_min = segy_obj.xl_start + segy_obj.xl_step*cube_incr
xl_max = segy_obj.xl_end - segy_obj.xl_step*cube_incr
t_min = segy_obj.t_start + segy_obj.t_step*cube_incr
t_max = segy_obj.t_end - segy_obj.t_step*cube_incr
# Print the buffer zone edges
print('Defining the buffer zone:')
print('(inl_min,','inl_max,','xl_min,','xl_max,','t_min,','t_max)')
print('(',inl_min,',',inl_max,',',xl_min,',',xl_max,',',t_min,',',t_max,')')
section = [inl_min, inl_max, segy_obj.inl_start, segy_obj.inl_step, xl_min, xl_max, segy_obj.xl_start, segy_obj.xl_step, t_min, t_max, segy_obj.t_start, segy_obj.t_step]
adr_label, num_classes = utils.make_label(pts_files, save_dir=save_dir, save=save)
# Shuffle
# np.take(arr, indices, axis=3) is equivalent to arr[:,:,:,indices,...]. If provided parameter 'out', the result will be placed in this array
adr_label = np.take(adr_label, np.random.permutation(len(adr_label)), axis=0, out=adr_label)
if pred:
label_dict = utils.label_dict(pts_files)
return segy_obj.data, adr_label, section, num_classes, label_dict
else:
return segy_obj.data, adr_label, section, num_classes
def initGui(self):
"""initGui(self) -> None
initialize the GUI
"""
self.initMainGrid()
if self.DEBUG:
self.setWindowTitle("CandleStick(Emulate)")
else:
self.setWindowTitle("CandleStick")
# analysis graphs
self.analysis_graphs = AnalysisGraphs()
self.analysis_graphs.setMaximumWidth(self._window_width // 3)
# chart graphs
self.chart_graphs = ChartGraphs()
# Settings
group_setting, grid_setting = make_groupbox_and_grid(
self, 40, (self._window_height) // 3,
"Settings", self._groupbox_title_font_size, self._spacing
)
label_ema1 = make_label(
group_setting, "N1", self._label_font_size, True, Qt.AlignLeft
)
grid_setting.addWidget(label_ema1, 0, 0)
self.le_ema1 = QLineEdit(group_setting)
self.le_ema1.setText(str(self._N_ema1))
# font = self.le_ema1.font()
# font.setPointSize(self._button_font_size)
# self.le_ema1.setFont(font)
self.le_ema1.setMaximumWidth(40)
self.le_ema1.setMaximumHeight(16)
# self.le_ema1.resize(20, 16)
self.le_ema1.setStyleSheet("background-color:{};".format(self._txt_bg_color))
self.le_ema1.setValidator(QIntValidator())
grid_setting.addWidget(self.le_ema1, 0, 1)
label_ema2 = make_label(
group_setting, "N2", self._label_font_size, True, Qt.AlignLeft
)
grid_setting.addWidget(label_ema2, 1, 0)
self.le_ema2 = QLineEdit(group_setting)
self.le_ema2.setText(str(self._N_ema2))
# font = self.le_ema2.font()
# font.setPointSize(self._button_font_size)
# self.le_ema2.setFont(font)
self.le_ema2.setMaximumWidth(40)
self.le_ema2.setMaximumHeight(16)
# self.le_ema2.resize(20, 16)
self.le_ema2.setStyleSheet("background-color:{};".format(self._txt_bg_color))
self.le_ema2.setValidator(QIntValidator())
grid_setting.addWidget(self.le_ema2, 1, 1)
label_delta = make_label(
group_setting, "delta", self._label_font_size, True, Qt.AlignLeft
)
grid_setting.addWidget(label_delta, 2, 0)
self.le_delta = QLineEdit(group_setting)
self.le_delta.setText(str(self._delta))
# font = self.le_delta.font()
# font.setPointSize(self._button_font_size)
# self.le_delta.setFont(font)
self.le_delta.setMaximumWidth(40)
self.le_delta.setMaximumHeight(16)
self.le_delta.setStyleSheet("background-color:{};".format(self._txt_bg_color))
self.le_delta.setValidator(QDoubleValidator())
grid_setting.addWidget(self.le_delta, 2, 1)
# Results
group_results, grid_results = make_groupbox_and_grid(
self, 40, (self._window_height) // 3,
"Results", self._groupbox_title_font_size, self._spacing
)
label_benefit = make_label(
group_results, "Benefit", self._label_font_size, True, Qt.AlignLeft
)
self.label_benefit_value = make_label(
group_results, "0", self._label_font_size, True, Qt.AlignLeft
)
label_days = make_label(
group_results, "Days", self._label_font_size, True, Qt.AlignLeft
)
self.label_days_value = make_label(
group_results, "0", self._label_font_size, True, Qt.AlignLeft
)
label_perday = make_label(
group_results, "Per day", self._label_font_size, True, Qt.AlignLeft
)
self.label_perday_value = make_label(
group_results, "0", self._label_font_size, True, Qt.AlignLeft
)
grid_results.addWidget(label_benefit, 0, 0)
grid_results.addWidget(self.label_benefit_value, 1, 0)
grid_results.addWidget(label_days, 2, 0)
grid_results.addWidget(self.label_days_value, 3, 0)
grid_results.addWidget(label_perday, 4, 0)
grid_results.addWidget(self.label_perday_value, 5, 0)
# Items in debug mode
if not self.DEBUG:
self.grid.addWidget(self.analysis_graphs, 0, 0, 2, 2)
self.grid.addWidget(self.chart_graphs, 0, 2, 2, 3)
# self.grid.addWidget(self.glw, 0, 0, 3, 5)
self.grid.addWidget(group_setting, 0, 5, 1, 1)
self.grid.addWidget(group_results, 1, 5, 1, 1)
else:
group_debug, grid_debug = make_groupbox_and_grid(
self, 60, self._window_height // 3,
"DEBUG", self._groupbox_title_font_size, self._spacing
)
## start position
self.le_start = QLineEdit(group_debug)
self.le_start.setText("0")
# font = self.le_start.font()
# font.setPointSize(self._button_font_size)
# self.le_start.setFont(font)
self.le_start.resize(40, 16)
self.le_start.setStyleSheet("background-color:{};".format(self._txt_bg_color))
self.le_start.setValidator(QIntValidator())
## end position
self.le_end = QLineEdit(group_debug)
self.le_end.setText("100")
self.le_end.resize(40, 16)
self.le_end.setStyleSheet("background-color:{};".format(self._txt_bg_color))
self.le_end.setValidator(QIntValidator())
## checkbox to use the average values of each OHLC as order ltps
self.chk_use_average = QCheckBox(group_debug)
pal = QPalette()
pal.setColor(QPalette.Foreground, QColor(self._chk_box_bg_color))
# pal.setColor(QPalette.Active, QColor("white"))
self.chk_use_average.setPalette(pal)
# self.chk_use_average.setStyleSheet("background-color:{};".format(self._chk_bg_color))
self.chk_use_average.setChecked(False)
self.chk_use_average.resize(16, 16)
# self.chk_use_average.stateChanged.connect(self.setTxtBTCJPYEditState)
## update button
self.button1 = make_pushbutton(
self, 40, 16, "Update", 14,
method=self.update, color=None, isBold=False
)
self.button3 = make_pushbutton(
self, 40, 16, "Analyze", 14,
method=self.analyze, color=None, isBold=False
)
self.button4 = make_pushbutton(
self, 40, 16, "View", 14,
method=self.drawAnalysisResults, color=None, isBold=False
)
## add
grid_debug.addWidget(self.le_start, 0, 0)
grid_debug.addWidget(self.le_end, 1, 0)
grid_debug.addWidget(self.chk_use_average, 2, 0)
grid_debug.addWidget(self.button1, 3, 0)
grid_debug.addWidget(self.button3, 4, 0)
grid_debug.addWidget(self.button4, 5, 0)
self.grid.addWidget(self.analysis_graphs, 0, 0, 3, 2)
self.grid.addWidget(self.chart_graphs, 0, 2, 3, 3)
# self.grid.addWidget(self.glw, 0, 0, 3, 5)
self.grid.addWidget(group_setting, 0, 5, 1, 1)
self.grid.addWidget(group_results, 1, 5, 1, 1)
self.grid.addWidget(group_debug, 2, 5, 1, 1)
def parse_label(self, value):
name, size_range = value.split(':')
min_size, max_size = size_range.split('-')
return make_label(name, min_size, max_size)
def initGui(self):
"""initGui(self) -> None
initialize the GUI
"""
# initialize the main
self.resize(self._init_window_width, self._init_window_height)
grid = QGridLayout(self)
grid.setSpacing(10)
if self.DEBUG:
self.setWindowTitle("Analysis(Debug)")
# Coordinate and Value of the mouse pointer.
widget_coor_value = QWidget(self)
widget_coor_value.resize(self._init_window_width, 30)
grid_coor_value = QGridLayout(widget_coor_value)
grid_coor_value.setSpacing(10)
self.label_coor_value = make_label(self,
"(NA, NA, 0.00e-00)",
self._font_size_label,
isBold=True,
alignment=Qt.AlignRight)
grid_coor_value.addWidget(self.label_coor_value, 0, 0)
# graphs
self.glw = pg.GraphicsLayoutWidget()
## benefit map
self.plot_benefit = self.glw.addPlot(
# axisItems={"bottom":self.iw_axBottom, "left":self.iw_axLeft}
)
self.plot_benefit.setAspectLocked(True)
self.img_benefit = pg.ImageItem()
self.plot_benefit.addItem(self.img_benefit)
def mouseMoved(pos):
try:
coor = self.img_benefit.mapFromScene(pos)
x, y = int(coor.x()), int(coor.y())
if self.img_benefit.image is not None:
img = self.img_benefit.image
if 0 <= x <= img.shape[1] and 0 <= y <= img.shape[0]:
self.label_coor_value.setText(
"({0}, {1}, {2:.4e})".format(x, y, img[x, y]))
except IndexError:
pass
except Exception as ex:
print(ex)
self.img_benefit.scene().sigMouseMoved.connect(mouseMoved)
## Box plot diagram for dead cross
self.glw.nextRow()
self.plot_box_dead = self.glw.addPlot()
## Box plot diagram for golden cross
self.glw.nextRow()
self.plot_box_golden = self.glw.addPlot()
# construct
grid.addWidget(widget_coor_value, 0, 0, 1, 1)
grid.addWidget(self.glw, 1, 0, 1, 9)
def train(self, config):
if config.is_train:
data_dir = self.train_dir
else:
data_dir = self.test_dir
data, label = read_data(data_dir)
global_step = tf.Variable(0, trainable=False)
starter_learning_rate = 0.1
#learning_rate = tf.train.exponential_decay(starter_learning_rate, global_step,
#1000, 0.001, staircase=True)
train_op={}
models={}
for step in range(config.scale_factor//2):
train_op['train_op%i'%step]=tf.train.AdamOptimizer(config.learning_rate).minimize(self.loss(step))
models['model%i'%step]=self.model(step)
tf.global_variables_initializer().run()
counter = 0
start_time = time.time()
if self.load(self.checkpoint_dir):
print(" [*] Load SUCCESS")
else:
print(" [!] Load failed...")
if config.is_train:
print("Training...")
topg=[make_topg(data, step, self.scale_factor) for step in range(self.scale_factor//2)]
topg=np.array(topg)
label=[make_label(label, step, self.scale_factor) for step in range(self.scale_factor//2)]
label=np.array(label)
for ep in xrange(config.epoch):
ep=np.int64(ep)
# Run by batch images
batch_idxs = len(data) // config.batch_size
for idx in xrange(0, batch_idxs):
batch_images0 = data[idx * config.batch_size: (idx + 1) * config.batch_size]
batch_labels0 = label[:,idx * config.batch_size: (idx + 1) * config.batch_size,:,:]
topg0=topg[:,idx * config.batch_size: (idx + 1) * config.batch_size,:,:]
counter += 1
for step in range(self.scale_factor//2):
if step==0:
batch_images=np.stack([batch_images0[:,:,:,0],topg0[step]]
,axis=-1)
batch_labels=batch_labels0[step]
_, result=self.sess.run([train_op['train_op%i'%step], models['model%i'%step]],
feed_dict={self.images: batch_images, self.labels: batch_labels})
else:
#result = self.sess.run(self.model(step-1),
#feed_dict={self.images['images%i'%(step-1)] : batch_images})
result=result[:,:,:,0]
batch_images=np.stack([result, topg0[step]], axis=-1)
batch_labels =batch_labels0[step]
_, result=self.sess.run([train_op['train_op%i'%step], models['model%i'%step]],
feed_dict={self.images: batch_images,
self.labels: batch_labels})
if counter % 10 == 0:
s = (self.scale_factor // 2) - 1
result = self.sess.run(models['model%i'%s], feed_dict={self.images: batch_images})
MSE = 0
for k in range(config.batch_size):
acc = sklearn.metrics.mean_squared_error(result[k, :, :, 0], label[-1,k, :, :, 0])
MSE += acc
err = MSE / len(data[:, :, :, 0]-1)
print("Epoch: [%2d], step: [%2d], time: [%4.4f], loss: [%.8f] " \
% ((ep + 1), counter, time.time() - start_time, err))
if counter % 500 == 0:
self.save(config.checkpoint_dir, counter)
tf.get_default_graph().finalize()
else:
print("Testing...")
MSE=0
for k in range(len(data[:,0,0,0])):
acc = sklearn.metrics.mean_squared_error(data[k,:,:,0],label[k,:,:,0])
MSE+=acc
print("Bicubic error : ", MSE / len(data[:, :, :, 0]))
for step in range(self.scale_factor//2):
if step == 0:
batch_images = np.stack([data[:, :, :, 0], make_topg(data, step, self.scale_factor)]
, axis=-1)
else :
batch_images=np.stack([result, make_topg(data,step,self.scale_factor)], axis=-1)
result = self.sess.run(models['model%i'%step], feed_dict={self.images: batch_images})
result = np.array(result)[:,:,:,0]
MSE=0
for k in range(len(data[:,0,0,0])):
acc = sklearn.metrics.mean_squared_error(result[k,:,:],label[k,:,:,0])
MSE+=acc
print("Model error : ", MSE/len(data[:,:,:,0]))
if config.save_result:
if not os.path.exists(config.result_fold):
os.makedirs(config.result_fold)
for k in range(len(data[:,0,0,0])):
original = plt.contourf(label[k, :, :, 0])
plt.colorbar(original)
Cmap=original.get_cmap()
plt.savefig('%s/%d_label.png' % (config.result_fold, k))
plt.show()
base = plt.contourf(data[k, :, :, 0], cmap=Cmap)
plt.colorbar(original)
plt.savefig('%s/%d_bicubic.png' %(config.result_fold,k))
plt.show()
prev=plt.contourf(result[k,:,:], cmap=Cmap)
plt.colorbar(original)
plt.savefig('%s/%d_predicted.png' %(config.result_fold,k))
plt.show()
def main():
parser = argparse.ArgumentParser()
parser.add_argument('--input_path', required=True)
parser.add_argument('--output_dir', required=True)
parser.add_argument('--folds', required=True)
parser.add_argument('--verbose', action='store_true')
args = parser.parse_args()
utils.setup_logging(args.verbose)
folds = int(args.folds)
assert folds > 1
with open(args.input_path, 'r') as fp:
lines = fp.read().splitlines()
# Swap date and ticker in place.
item_count = -1
for i in range(len(lines)):
items = lines[i].split(' ')
if item_count < 0: item_count = len(items)
else: assert item_count == len(items)
items[0], items[1] = items[1], items[0]
lines[i] = ' '.join(items)
# This will sort lines by entry and then ticker.
lines.sort()
# Prepare all the file handlers. We are going to write to folds * 4 files,
# with each fold a training data file, a training index file, a testing
# data file, and a testing index file.
train_data_fps, train_index_fps = [], []
test_data_fps, test_index_fps = [], []
for i in range(folds):
train_data_fps.append(open('%s/train_data_%d' % (args.output_dir, i), 'w'))
train_index_fps.append(open('%s/train_index_%d' % (args.output_dir, i),
'w'))
test_data_fps.append(open('%s/test_data_%d' % (args.output_dir, i), 'w'))
test_index_fps.append(open('%s/test_index_%d' % (args.output_dir, i), 'w'))
# Sanity checks.
assert len(train_data_fps) == folds
assert len(train_index_fps) == folds
assert len(test_data_fps) == folds
assert len(test_index_fps) == folds
segment = int(len(lines) / folds)
for i in range(folds):
logging.info('Writing fold %d' % (i+1))
start = segment * i
end = start + segment
if i == folds - 1: end = len(lines)
for j in range(start, end):
items = lines[j].split(' ')
# Write label, features to data files and date, ticker to index files.
assert len(items) > 3
data = '%s %s' % (utils.make_label(float(items[2]), False),
' '.join(items[3:]))
index = ' '.join(items[:2])
for k in range(folds):
if i != k:
print(data, file=train_data_fps[k])
print(index, file=train_index_fps[k])
else:
print(data, file=test_data_fps[k])
print(index, file=test_index_fps[k])
# Close all file handlers.
close_all(train_data_fps)
close_all(train_index_fps)
close_all(test_data_fps)
close_all(test_index_fps)
