Exemplo n.º 1
0
def MultipleWindows(Files, OperatorSet=None, Windows=False, SliceProject=1):
    """
    Attain multiple windows for different applied operators.
    Data other than mesh are plotted individually as well.
    """

    if Windows is False:
        It.Iterator(Files, OperatorSet)

    if Windows is True:
        Pa.PathCreator()  # Creates necessary folders.

        Count = 1

        # Load the plots without operators.
        for item in Files:
            Vi.SetActiveWindow(Count)  # Select window to be worked in.
            Image = Mk.MakeImages([item])
            Image.Plot()
            Image.Save()
            Vi.ToggleLockViewMode()  # Lock the view perspective.
            Vi.AddWindow()  # Add another window for next iteration.
            Count += 1

        try:
            # Display plots with operators if defined.
            for item in OperatorSet:
                Vi.SetActiveWindow(Count)  # Select window to be worked in.
                It.Iterator(Files, [item], SliceProject=0)
                Vi.DrawPlots()  # Draw plots with operator.
                Wi.WindowSettings()
                Vi.ToggleLockViewMode()  # Lock the view perspective.
                Vi.AddWindow()  # Add another window for next iteration.
                Count += 1

        except Exception:
            pass

        # Last window is always empty.
        Vi.SetActiveWindow(Count)
        Vi.DeleteWindow()  # Delete last window.

        # Compensate for odd number of windows.
        if (Count - 1) < 2:
            Vi.SetWindowLayout(1)
        elif (Count - 1) == 2:
            Vi.SetWindowLayout(2)
        elif 2 < (Count - 1) <= 4:
            Vi.SetWindowLayout(4)
        elif 4 < (Count - 1) <= 6:
            Vi.SetWindowLayout(6)
        elif 6 < (Count - 1) <= 8:
            Vi.SetWindowLayout(8)
        elif (Count - 1) == 9:
            Vi.SetWindowLayout(9)
        elif 9 > (Count - 1) <= 16:
            print "Too many windows to view nicely."
        else:
            print "Too many windows for ViSit to Support."

        # Alternate saving scheme for multiple windows is used.
        i = 0
        while os.path.exists("../Sessions/XML_Original/sampleMulti%s.session" %
                             i):
            i += 1

        Vi.SaveSession("../Sessions/XML_Original/sampleMulti%s.session" % i)
Exemplo n.º 2
0
print("Results saved in result.silo")


# Visualise result.silo using VisIt
import visit
visit.LaunchNowin()
saveatts = visit.SaveWindowAttributes()
saveatts.fileName = 'result-visit.png'
saveatts.family = 0
saveatts.width = 1024
saveatts.height = 768
saveatts.resConstraint = saveatts.NoConstraint
saveatts.outputToCurrentDirectory = 1
visit.SetSaveWindowAttributes(saveatts)
visit.OpenDatabase('result.silo')
visit.AddPlot('Contour', 'density')
c=visit.ContourAttributes()
c.colorType=c.ColorByColorTable
c.colorTableName = "hot"
visit.SetPlotOptions(c)
visit.DrawPlots()
v=visit.GetView3D()
v.viewNormal=(-0.554924, 0.703901, 0.443377)
v.viewUp=(0.272066, -0.3501, 0.896331)
visit.SetView3D(v)
visit.SaveWindow()
subprocess.call(["cloud", "upload", "result-visit.png", "result-visit.png", "--set-acl=public-read"])
visit.DeleteAllPlots()
visit.CloseDatabase('result.silo')

Exemplo n.º 3
0
import sys
# visit
sys.path.append("/home/neo/visit/2.11.0/linux-x86_64/lib/site-packages")
import visit as vs
vs.Launch()
vs.OpenDatabase("visit-data/globe.silo")
vs.DefineScalarExpression("myvar", "sin(u) + cos(w)")
# Plot the scalar expression variable.
vs.AddPlot("Pseudocolor", "myvar")
vs.DrawPlots()
# Plot a vector expression variable.
vs.DefineVectorExpression("myvec", "{u,v,w}")
vs.AddPlot("Vector", "myvec")
vs.DrawPlots()

d = input('Press anything to quit')

Exemplo n.º 4
0
def run(conf):

    pp = pprint.PrettyPrinter()
    # pp.pprint(conf)

    # Make sure the global configuration is in place
    utils.run_global_visit_configuration(conf)

    visitConf = utils.getValueForKeyPath(conf, 'postprocessing.tracks.visit')
    if not visitConf:
        print "No configuration for visuals. Nothing to do."
        return 0

    # Set up background gradient, axis labels etc.
    utils.setAnnotations(conf,
                         'postprocessing.tracks.visit.annotationAttributes')

    # Set the view straight
    utils.setView(conf, 'postprocessing.tracks.visit.view')

    # Plot the map data
    utils.plotMapdata(conf, 'postprocessing.tracks.visit.map')

    # Plot the tracks
    trackPlotConf = utils.getValueForKeyPath(
        conf, 'postprocessing.tracks.visit.track')
    # pp.pprint(trackPlotConf)

    currentDirectory = os.path.abspath(os.getcwd())
    os.chdir(conf['tracks_dir'])

    if trackPlotConf:

        # Save value of legend flag
        legendFlag = trackPlotConf['PseudocolorAttributes']['legendFlag']

        # Plot the Tracks
        # track_pattern = conf['tracks_dir'] + "/*-track_*.vtk"

        track_pattern = "*-track_*.vtk"
        list = sorted(glob.glob(track_pattern))
        print "Looking with pattern " + track_pattern
        print "Found %d track files." % len(list)
        count = 0
        for trackFile in list:

            # add plot
            # trackFile = conf['tracks_dir'] + os.path.sep + fname

            # plot the legend for the first one only
            if (count == 1) and legendFlag:
                trackPlotConf['PseudocolorAttributes']['legendFlag'] = 0
                # pp.pprint(trackPlotConf)

            # Plot the actual track data
            file = conf['tracks_dir'] + os.path.sep + trackFile
            print "Adding plot for " + file
            utils.addPseudocolorPlot(file, trackPlotConf)

            count = count + 1

            # in case the script is being debugged, exit the script
            # after 10 tracks. This could be configured
            # if getValueForKeyPath(conf,'postprocessing.debugVisitScript') and count > 10

        # Restore flag value
        trackPlotConf['PseudocolorAttributes']['legendFlag'] = legendFlag
        # pp.pprint(trackPlotConf)

    print "Drawing plots"
    visit.DrawPlots()

    print "Saving image to %s" % os.getcwd()
    utils.saveImage("tracks", 0)

    os.chdir(currentDirectory)

    return
Exemplo n.º 5
0
def make_distribution_movie(cellids,
                            rotated,
                            inputDirectory,
                            outputDirectory,
                            outputFileName,
                            zoom=1.0,
                            viewNormal=[0.488281, 0.382966, -0.784167],
                            minThreshold=1e-18,
                            maxThreshold=1e37):
    '''Makes a distribution movie of some given distribution data
      Example usage:
      make_distribution_movie(cellids=[18302, 19432, 19042], rotated=True, inputDirectory=\"/home/hannukse/meteo/stornext/field/vlasiator/2D/AAJ/silo_files/\", outputDirectory=\"/home/hannukse/MOVIES/\", outputFileName=\"testmovie\", zoom=0.8, viewNormal=[0.488281, 0.382966, -0.784167], minThreshold=1e-17, maxThreshold=1.2e37)
      Note: viewNormal determines the angle of view (straight from visit)
   '''
    if len(viewNormal) != 3:
        print "ERROR, INVALID VIEWNORMAL LENGTH, SHOULD BE 3"
        return
    for cell in sorted(cellids):
        # OPTIONS
        ###########################################################
        cellid = str(cell)
        #databaseName = "localhost:/home/hannukse/meteo/lustre/tmp/hannuksela/AAM/velgrid.rotated." + cellid + ".*.silo database"
        if rotated == True:
            rotateFix = "rotated."
        else:
            rotateFix = ""
        inputFileName = "velgrid." + rotateFix + cellid + ".*.silo"
        databaseName = "localhost:" + inputDirectory + inputFileName + " database"
        outputDir = outputDirectory
        fileName = outputFileName + "_" + cellid + "_"
        WIDTH = 3000
        HEIGHT = 3000
        # Threshold values:
        # TODO: USE VLSV READER TO AUTOMATE THIS
        minimumThreshold = minThreshold
        maximumThreshold = maxThreshold
        ###########################################################

        vis.OpenDatabase(databaseName, 0)
        #Load settings
        visSettings.load_visit_settings()
        #Make a plot
        vis.AddPlot("Pseudocolor", "avgs", 1, 1)
        vis.SetActivePlots(0)
        vis.AddOperator("Threshold", 1)
        vis.ThresholdAtts = vis.ThresholdAttributes()
        vis.ThresholdAtts.outputMeshType = 0
        vis.ThresholdAtts.listedVarNames = ("default")
        vis.ThresholdAtts.zonePortions = (1)
        vis.ThresholdAtts.lowerBounds = (minimumThreshold)
        vis.ThresholdAtts.upperBounds = (maximumThreshold)
        vis.ThresholdAtts.defaultVarName = "avgs"
        vis.ThresholdAtts.defaultVarIsScalar = 1
        vis.SetOperatorOptions(vis.ThresholdAtts, 1)
        vis.DrawPlots()
        # Begin spontaneous state
        vis.View3DAtts = vis.View3DAttributes()
        vis.View3DAtts.viewNormal = (viewNormal[0], viewNormal[1],
                                     viewNormal[2])
        vis.View3DAtts.focus = (-634.56, 91.3781, -13.7891)
        vis.View3DAtts.viewUp = (-0.102795, 0.917551, 0.3841)
        vis.View3DAtts.viewAngle = 30
        vis.View3DAtts.parallelScale = 1.45614e+06
        vis.View3DAtts.nearPlane = -2.91228e+06
        vis.View3DAtts.farPlane = 2.91228e+06
        vis.View3DAtts.imagePan = (0, 0)
        vis.View3DAtts.imageZoom = zoom
        vis.View3DAtts.perspective = 1
        vis.View3DAtts.eyeAngle = 2
        vis.View3DAtts.centerOfRotationSet = 0
        vis.View3DAtts.centerOfRotation = (-634.56, 91.3781, -13.7891)
        vis.View3DAtts.axis3DScaleFlag = 0
        vis.View3DAtts.axis3DScales = (1, 1, 1)
        vis.View3DAtts.shear = (0, 0, 1)
        vis.SetView3D(vis.View3DAtts)
        # End spontaneous state
        vis.ViewCurveAtts = vis.ViewCurveAttributes()
        vis.ViewCurveAtts.domainCoords = (0, 1)
        vis.ViewCurveAtts.rangeCoords = (0, 1)
        vis.ViewCurveAtts.viewportCoords = (0.2, 0.95, 0.15, 0.95)
        vis.ViewCurveAtts.domainScale = vis.ViewCurveAtts.LINEAR  # LINEAR, LOG
        vis.ViewCurveAtts.rangeScale = vis.ViewCurveAtts.LINEAR  # LINEAR, LOG
        vis.SetViewCurve(vis.ViewCurveAtts)
        vis.View2DAtts = vis.View2DAttributes()
        vis.View2DAtts.windowCoords = (0, 1, 0, 1)
        vis.View2DAtts.viewportCoords = (0.2, 0.95, 0.15, 0.95)
        vis.View2DAtts.fullFrameActivationMode = vis.View2DAtts.Auto  # On, Off, Auto
        vis.View2DAtts.fullFrameAutoThreshold = 100
        vis.View2DAtts.xScale = vis.View2DAtts.LINEAR  # LINEAR, LOG
        vis.View2DAtts.yScale = vis.View2DAtts.LINEAR  # LINEAR, LOG
        vis.View2DAtts.windowValid = 0
        vis.SetView2D(vis.View2DAtts)
        vis.View3DAtts = vis.View3DAttributes()
        vis.View3DAtts.viewNormal = (viewNormal[0], viewNormal[1],
                                     viewNormal[2])
        vis.View3DAtts.focus = (-634.56, 91.3781, -13.7891)
        vis.View3DAtts.viewUp = (-0.102795, 0.917551, 0.3841)
        vis.View3DAtts.viewAngle = 30
        vis.View3DAtts.parallelScale = 1.45614e+06
        vis.View3DAtts.nearPlane = -2.91228e+06
        vis.View3DAtts.farPlane = 2.91228e+06
        vis.View3DAtts.imagePan = (0, 0)
        vis.View3DAtts.imageZoom = zoom
        vis.View3DAtts.perspective = 1
        vis.View3DAtts.eyeAngle = 2
        vis.View3DAtts.centerOfRotationSet = 0
        vis.View3DAtts.centerOfRotation = (-634.56, 91.3781, -13.7891)
        vis.View3DAtts.axis3DScaleFlag = 0
        vis.View3DAtts.axis3DScales = (1, 1, 1)
        vis.View3DAtts.shear = (0, 0, 1)
        vis.SetView3D(vis.View3DAtts)
        vis.ViewAxisArrayAtts = vis.ViewAxisArrayAttributes()
        vis.ViewAxisArrayAtts.domainCoords = (0, 1)
        vis.ViewAxisArrayAtts.rangeCoords = (0, 1)
        vis.ViewAxisArrayAtts.viewportCoords = (0.15, 0.9, 0.1, 0.85)
        vis.SetViewAxisArray(vis.ViewAxisArrayAtts)
        for i in range(0, vis.GetDatabaseNStates()):
            vis.SetTimeSliderState(i)
            vis.SaveWindowAtts = vis.SaveWindowAttributes()
            vis.SaveWindowAtts.outputToCurrentDirectory = 0
            vis.SaveWindowAtts.outputDirectory = outputDir
            vis.SaveWindowAtts.fileName = fileName
            vis.SaveWindowAtts.family = 1
            vis.SaveWindowAtts.format = vis.SaveWindowAtts.PNG  # BMP, CURVE, JPEG, OBJ, PNG, POSTSCRIPT, POVRAY, PPM, RGB, STL, TIFF, ULTRA, VTK, PLY
            vis.SaveWindowAtts.width = WIDTH
            vis.SaveWindowAtts.height = HEIGHT
            vis.SaveWindowAtts.screenCapture = 0
            vis.SaveWindowAtts.saveTiled = 0
            vis.SaveWindowAtts.quality = 100
            vis.SaveWindowAtts.progressive = 0
            vis.SaveWindowAtts.binary = 0
            vis.SaveWindowAtts.stereo = 0
            vis.SaveWindowAtts.compression = vis.SaveWindowAtts.PackBits  # None, PackBits, Jpeg, Deflate
            vis.SaveWindowAtts.forceMerge = 0
            vis.SaveWindowAtts.resConstraint = vis.SaveWindowAtts.ScreenProportions  # NoConstraint, EqualWidthHeight, ScreenProportions
            vis.SaveWindowAtts.advancedMultiWindowSave = 0
            vis.SetSaveWindowAttributes(vis.SaveWindowAtts)
            vis.SaveWindow()
        vis.DeleteActivePlots()
        vis.CloseDatabase(databaseName)
        # Make the movie:
        framerate = 5
        subprocess.call([
            pythonLibDirectoryPath + pyVisitPath + "moviecompilescript.sh",
            outputDir, fileName, framerate
        ])
Exemplo n.º 6
0
 def __init__(self):
     Window.__init__(self)
     visit.OpenDatabase(db)
     visit.AddPlot("Pseudocolor", "d")
     visit.DrawPlots()
Exemplo n.º 7
0
def draw_plots():
    visit.DrawPlots()
Exemplo n.º 8
0
def make_movie(variableName,
               minValue,
               maxValue,
               inputDirectory,
               inputFileName,
               outputDirectory,
               outputFileName,
               colorTable="hot_desaturated",
               startFrame=-1,
               endFrame=-1):
    '''
   Function for making a movie
   
   Arguments:
   :param variableName                  Name of the variable
   :param minValue                      Minimum value of the variable
   :param maxValue                      Maximum value of the variable
   :param inputDirectory                Path to input vlsv/silo files
   :param inputFileName                 Name of the file(s) so for example if the filenames are bulk.0000.silo, bulk.0001.silo, .. then inputFileName=\"bulk.*.silo\""
   :param outputDirectory               Path to output directory
   :param outputFileName                Name of the output file
   :param colorTable="hot_desaturated"  Color table for the plots
   :param startFrame=-1                 Starting frame of the movie (-1 equals 0)
   :param endFrame=-1                   Starting frame of the movie (-1 equals last frame)
   '''
    # OPTIONS
    #################################################################
    # Input frame properties
    _startFrame = startFrame  # Note: if _startFrame is set to -1 the start frame gets set to 0
    _endFrame = endFrame  # Note: if _endFrame is set to -1 the _endFrame is automatically the number of frames in the database

    # Input variable
    _variableName = variableName
    minVariableValue = minValue
    maxVariableValue = maxValue
    colorTableName = colorTable

    # Input directory and file names
    #_outputDir = "/home/hannukse/MOVINGFRAME_MOVIES/AAJ_BZ_REMAKE/" # Set the output directory (Where .png s are saved)
    _outputDir = outputDirectory
    #_outputFileName = "BZ_FORESHOCK_2_" # The file names for the png files. These for ex. will be saved visit0000.png, visit0001.png, ..
    _outputFileName = outputFileName  # The file names for the png files.
    #databaseName = "localhost:/home/hannukse/meteo/stornext/field/vlasiator/2D/AAJ/silo_files/bulk.*.silo database" # For navigating to the silo files
    databaseName = "localhost:" + inputDirectory + inputFileName + " database"  # For navigating to the silo files
    # Note: a slice of the plot in z-axis is taken automatically
    #################################################################

    # LaunchNowin(vdir=visitBinDirectory)
    #dx = speedX * frameInSeconds # Note: This is in meters per frame!
    #dy = speedY * frameInSeconds # Note: This is in meters per frame!
    #LaunchNowin(vdir="/usr/local/visit/bin")
    #Set up window and annotations
    #vis.LaunchNowin(vdir="/usr/local/visit/bin")
    vis.OpenDatabase(databaseName, 0)

    #Load settings
    visSettings.load_visit_settings()

    vis.AddPlot("Pseudocolor", _variableName, 1, 1)  #CONTINUE
    vis.SetActivePlots(0)
    vis.PseudocolorAtts = vis.PseudocolorAttributes()
    vis.PseudocolorAtts.legendFlag = 1
    vis.PseudocolorAtts.lightingFlag = 1
    vis.PseudocolorAtts.minFlag = 1
    vis.PseudocolorAtts.maxFlag = 1
    vis.PseudocolorAtts.centering = vis.PseudocolorAtts.Natural  # Natural, Nodal, Zonal
    vis.PseudocolorAtts.scaling = vis.PseudocolorAtts.Linear  # Linear, Log, Skew
    vis.PseudocolorAtts.limitsMode = vis.PseudocolorAtts.CurrentPlot  # OriginalData, CurrentPlot
    vis.PseudocolorAtts.min = minVariableValue
    vis.PseudocolorAtts.max = maxVariableValue
    vis.PseudocolorAtts.pointSize = 0.05
    vis.PseudocolorAtts.pointType = vis.PseudocolorAtts.Point  # Box, Axis, Icosahedron, Point, Sphere
    vis.PseudocolorAtts.skewFactor = 1
    vis.PseudocolorAtts.opacity = 1
    vis.PseudocolorAtts.colorTableName = colorTableName
    vis.PseudocolorAtts.invertColorTable = 0
    vis.PseudocolorAtts.smoothingLevel = 0
    vis.PseudocolorAtts.pointSizeVarEnabled = 0
    vis.PseudocolorAtts.pointSizeVar = "default"
    vis.PseudocolorAtts.pointSizePixels = 2
    vis.PseudocolorAtts.lineStyle = vis.PseudocolorAtts.SOLID  # SOLID, DASH, DOT, DOTDASH
    vis.PseudocolorAtts.lineWidth = 0
    vis.PseudocolorAtts.opacityType = vis.PseudocolorAtts.Explicit  # Explicit, ColorTable
    vis.SetPlotOptions(vis.PseudocolorAtts)

    vis.SetActivePlots(0)
    vis.AddOperator("Slice", 1)
    vis.SetActivePlots(0)
    vis.SliceAtts = vis.SliceAttributes()
    vis.SliceAtts.originType = vis.SliceAtts.Intercept  # Point, Intercept, Percent, Zone, Node
    vis.SliceAtts.originPoint = (0, 0, 0)
    vis.SliceAtts.originIntercept = 0
    vis.SliceAtts.originPercent = 0
    vis.SliceAtts.originZone = 0
    vis.SliceAtts.originNode = 0
    vis.SliceAtts.normal = (0, 0, 1)
    vis.SliceAtts.axisType = vis.SliceAtts.ZAxis  # XAxis, YAxis, ZAxis, Arbitrary, ThetaPhi
    vis.SliceAtts.upAxis = (0, 1, 0)
    vis.SliceAtts.project2d = 1
    vis.SliceAtts.interactive = 1
    vis.SliceAtts.flip = 0
    vis.SliceAtts.originZoneDomain = 0
    vis.SliceAtts.originNodeDomain = 0
    vis.SliceAtts.meshName = "SpatialGrid"
    vis.SliceAtts.theta = 0
    vis.SliceAtts.phi = 90
    vis.SetOperatorOptions(vis.SliceAtts, 1)
    vis.DrawPlots()

    if _endFrame == -1:
        _endFrame = vis.TimeSliderGetNStates() - 1

    if _startFrame == -1:
        _startFrame = 0

    # Iterate through frames
    for i in xrange(_startFrame, _endFrame + 1):
        vis.SetTimeSliderState(i)
        frame = i - _startFrame
        vis.SaveWindowAtts = vis.SaveWindowAttributes()
        vis.SaveWindowAtts.outputToCurrentDirectory = 0
        vis.SaveWindowAtts.outputDirectory = _outputDir
        vis.SaveWindowAtts.fileName = _outputFileName
        vis.SaveWindowAtts.family = 1
        vis.SaveWindowAtts.format = vis.SaveWindowAtts.PNG  # BMP, CURVE, JPEG, OBJ, PNG, POSTSCRIPT, POVRAY, PPM, RGB, STL, TIFF, ULTRA, VTK, PLY
        vis.SaveWindowAtts.width = 3000
        vis.SaveWindowAtts.height = 3000
        vis.SaveWindowAtts.screenCapture = 0
        vis.SaveWindowAtts.saveTiled = 0
        vis.SaveWindowAtts.quality = 100
        vis.SaveWindowAtts.progressive = 0
        vis.SaveWindowAtts.binary = 0
        vis.SaveWindowAtts.stereo = 0
        vis.SaveWindowAtts.compression = vis.SaveWindowAtts.PackBits  # None, PackBits, Jpeg, Deflate
        vis.SaveWindowAtts.forceMerge = 0
        vis.SaveWindowAtts.resConstraint = vis.SaveWindowAtts.ScreenProportions  # NoConstraint, EqualWidthHeight, ScreenProportions
        vis.SaveWindowAtts.advancedMultiWindowSave = 0
        vis.SetSaveWindowAttributes(vis.SaveWindowAtts)
        vis.SaveWindow()
    vis.DeleteActivePlots()
    vis.CloseDatabase(databaseName)
    # Make the movie:
    #subprocess.call("./moviecompilescript.sh " + _outputDir + " " + _outputFileName)
    pyVisitPath = "pyVisit/"
    #subprocess.call(pythonLibDirectoryPath + pyVisitPath + "moviecompilescript.sh")
    #subprocess.call(pythonLibDirectoryPath + pyVisitPath + "moviecompilescript.sh " + _outputDir + " " + _outputFileName)
    framerate = "10"
    subprocess.call([
        pythonLibDirectoryPath + pyVisitPath + "moviecompilescript.sh",
        _outputDir, _outputFileName, framerate
    ])
def visit_render_save_states(states,
                             config_view=None,
                             out_dir=os.getcwd(),
                             prefix=None,
                             figsize=(1024, 1024)):
    """Render and save states into PNG files.

    Parameters
    ----------
    states : list-alike
        List of states to render and save.
    config_view : str, optional
        Path of the YAML file with the configuration of the view;
        default is None (use default VisIt view).
    out_dir : str, optional
        Output directory; created is non-existent;
        default is the present working directory (".").
    prefix : str, optional
        Filename prefix; default is "None" (no prefix).
    figsize : tuple
        Figure width and height (in pixels); default is (1024, 1024).

    """
    visit.Source(VISIT_MAKEMOVIE)
    visit.ToggleCameraViewMode()

    # Create output directory if necessary.
    if not os.path.isdir(out_dir):
        os.makedirs(out_dir)

    # Define common attributes to save the window.
    SaveWindowAtts = visit.SaveWindowAttributes()
    SaveWindowAtts.outputToCurrentDirectory = 0
    SaveWindowAtts.outputDirectory = out_dir
    SaveWindowAtts.family = 0
    SaveWindowAtts.format = SaveWindowAtts.PNG
    SaveWindowAtts.width, SaveWindowAtts.height = figsize
    SaveWindowAtts.quality = 100
    SaveWindowAtts.resConstraint = SaveWindowAtts.NoConstraint

    # Define common rendering attributes.
    RenderingAtts = visit.RenderingAttributes()

    # Parse YAML file with the 3D view configuration.
    if config_view is not None:
        View3DAtts = visit_get_view(config_view, 3)

    # Loop over the states to render and save the plots.
    for i, state in enumerate(states):
        print('[state {}] Rendering and saving figure ...'.format(state))
        visit.SetTimeSliderState(state)

        if i == 0:
            visit.DrawPlots()
            visit.SetView3D(View3DAtts)

        # Get time-step index (stored as time value in XDMF file).
        visit.Query('Time')
        timestep = int(visit.GetQueryOutputValue())

        # Set rendering attributes.
        visit.SetRenderingAttributes(RenderingAtts)

        # Set state-specific attributes to save the window.
        SaveWindowAtts.fileName = '{}{:0>7}'.format(prefix, timestep)
        visit.SetSaveWindowAttributes(SaveWindowAtts)

        visit.SaveWindow()
Exemplo n.º 10
0
 def setUp(self):
     visit.OpenDatabase(db)
     visit.AddPlot("Pseudocolor", "d")
     visit.DrawPlots()
Exemplo n.º 11
0
def make_movie_auto(variableName,
                    boundaryBox,
                    vlsvFileName,
                    inputDirectory,
                    inputFileName,
                    outputDirectory,
                    outputFileName,
                    colorTableName="hot_desaturated",
                    startFrame=-1,
                    endFrame=-1,
                    thresholdCoefficient=0.6):
    '''
   Function for making a movie
   
   Arguments:
   :param variableName                  Name of the variable
   :param boundaryBox                   Box for collecting min and max threshold (The movie will focus on that area)
   :param vlsvFileName                  Name of a vlsv file where the function collects the threshold for the boundary box
   :param inputDirectory                Path to input vlsv/silo files
   :param inputFileName                 Name of the file(s) so for example if the filenames are bulk.0000.silo, bulk.0001.silo, .. then inputFileName=\"bulk.*.silo\""
   :param outputDirectory               Path to output directory
   :param outputFileName                Name of the output file
   :param colorTableName="hot_desaturated"  Color table for the plots
   :param thresholdCoefficient          Sets the coefficient for a covariant collected from the values from boundary box. The lower this is, the more focused the movie will be on the boundary box area
   :param startFrame=-1                 Starting frame of the movie (-1 equals 0)
   :param endFrame=-1                   Starting frame of the movie (-1 equals last frame)
   '''
    if thresholdCoefficient < 0:
        print "thresholdCoefficient must be non-negative!"
        return
    # OPTIONS
    #################################################################
    # Input frame properties
    _startFrame = startFrame  # Note: if _startFrame is set to -1 the start frame gets set to 0
    _endFrame = endFrame  # Note: if _endFrame is set to -1 the _endFrame is automatically the number of frames in the database

    # Input variable
    _variableName = variableName

    # Input directory and file names
    #_outputDir = "/home/hannukse/MOVINGFRAME_MOVIES/AAJ_BZ_REMAKE/" # Set the output directory (Where .png s are saved)
    _outputDir = outputDirectory
    #_outputFileName = "BZ_FORESHOCK_2_" # The file names for the png files. These for ex. will be saved visit0000.png, visit0001.png, ..
    _outputFileName = outputFileName  # The file names for the png files.
    #databaseName = "localhost:/home/hannukse/meteo/stornext/field/vlasiator/2D/AAJ/silo_files/bulk.*.silo database" # For navigating to the silo files
    databaseName = "localhost:" + inputDirectory + inputFileName + " database"  # For navigating to the silo files
    # Note: a slice of the plot in z-axis is taken automatically
    #################################################################

    # Get the min and max values:
    # Get all cell ids within the boundary box:
    vlsvReader = VlsvReader(vlsvFileName)
    # Get global boundaries:
    # Get xmax, xmin and xcells_ini
    xmax = vlsvReader.read_parameter(name="xmax")
    xmin = vlsvReader.read_parameter(name="xmin")
    xcells = vlsvReader.read_parameter(name="xcells_ini")
    # Do the same for y
    ymax = vlsvReader.read_parameter(name="ymax")
    ymin = vlsvReader.read_parameter(name="ymin")
    ycells = vlsvReader.read_parameter(name="ycells_ini")
    # And for z
    zmax = vlsvReader.read_parameter(name="zmax")
    zmin = vlsvReader.read_parameter(name="zmin")
    zcells = vlsvReader.read_parameter(name="zcells_ini")
    #Calculate cell lengths:
    cell_lengths = np.array([(xmax - xmin) / (float)(xcells),
                             (ymax - ymin) / (float)(ycells),
                             (zmax - zmin) / (float)(zcells)])
    # Get cell indices:
    cell_indice_bounds = np.array([
        (int)(((float)(boundaryBox[0]) - xmin) / (float)(cell_lengths[0])),
        (int)(((float)(boundaryBox[1]) - xmin) / (float)(cell_lengths[0])),
        (int)(((float)(boundaryBox[2]) - ymin) / (float)(cell_lengths[1])),
        (int)(((float)(boundaryBox[3]) - ymin) / (float)(cell_lengths[1])),
        (int)(((float)(boundaryBox[4]) - zmin) / (float)(cell_lengths[2])),
        (int)(((float)(boundaryBox[5]) - zmin) / (float)(cell_lengths[2]))
    ])
    # Get every cell id within the boundary box:
    cellids = []
    cell_indice = np.array(
        [cell_indice_bounds[0], cell_indice_bounds[2], cell_indice_bounds[4]])
    while True:
        cellids.append(cell_indice[0] + cell_indice[1] * xcells +
                       cell_indice[2] * xcells * ycells + 1)
        if cell_indice[0] < cell_indice_bounds[1]:
            cell_indice[0] = cell_indice[0] + 1
        elif cell_indice[1] < cell_indice_bounds[3]:
            cell_indice[1] = cell_indice[1] + 1
            cell_indice[0] = cell_indice_bounds[0]
        elif cell_indice[2] < cell_indice_bounds[5]:
            cell_indice[2] = cell_indice[2] + 1
            cell_indice[1] = cell_indice_bounds[1]
            cell_indice[0] = cell_indice_bounds[0]
        else:
            # Indice out of bounds -- got all cell ids
            break
    # Convert cell ids into set:
    cellids = Set(cellids)
    cellidlocations = []
    # Get all of the cell ids locations:
    allcellids = vlsvReader.read(name="SpatialGrid", tag="MESH")
    for i in xrange(len(allcellids)):
        if allcellids[i] in cellids:
            #This cell id is within the user-given boundary
            cellidlocations.append(allcellids[i])
    # Get all of the values:
    allvalues = vlsvReader.read_variables(name=_variableName)
    values = []
    # Get the values of the cell ids within the boundary
    for i in cellidlocations:
        values.append(allvalues[i])
    # We now have all the cell ids (and their locations in the arrays) from the area, set min and max thresholds:
    meanValue = np.mean(values)
    standardDeviationValue = np.std(values)
    maxValue = meanValue + (
        float)(thresholdCoefficient) * standardDeviationValue
    minValue = meanValue - (
        float)(thresholdCoefficient) * standardDeviationValue
    # Put threshold values:
    minVariableValue = minValue
    maxVariableValue = maxValue

    # LaunchNowin(vdir=visitBinDirectory)
    #dx = speedX * frameInSeconds # Note: This is in meters per frame!
    #dy = speedY * frameInSeconds # Note: This is in meters per frame!
    #LaunchNowin(vdir="/usr/local/visit/bin")
    #Set up window and annotations
    #vis.LaunchNowin(vdir="/usr/local/visit/bin")
    vis.OpenDatabase(databaseName, 0)

    #Load settings
    visSettings.load_visit_settings()

    vis.AddPlot("Pseudocolor", _variableName, 1, 1)  #CONTINUE
    vis.SetActivePlots(0)
    vis.PseudocolorAtts = vis.PseudocolorAttributes()
    vis.PseudocolorAtts.legendFlag = 1
    vis.PseudocolorAtts.lightingFlag = 1
    vis.PseudocolorAtts.minFlag = 1
    vis.PseudocolorAtts.maxFlag = 1
    vis.PseudocolorAtts.centering = vis.PseudocolorAtts.Natural  # Natural, Nodal, Zonal
    vis.PseudocolorAtts.scaling = vis.PseudocolorAtts.Linear  # Linear, Log, Skew
    vis.PseudocolorAtts.limitsMode = vis.PseudocolorAtts.CurrentPlot  # OriginalData, CurrentPlot
    vis.PseudocolorAtts.min = minVariableValue
    vis.PseudocolorAtts.max = maxVariableValue
    vis.PseudocolorAtts.pointSize = 0.05
    vis.PseudocolorAtts.pointType = vis.PseudocolorAtts.Point  # Box, Axis, Icosahedron, Point, Sphere
    vis.PseudocolorAtts.skewFactor = 1
    vis.PseudocolorAtts.opacity = 1
    vis.PseudocolorAtts.colorTableName = colorTableName
    vis.PseudocolorAtts.invertColorTable = 0
    vis.PseudocolorAtts.smoothingLevel = 0
    vis.PseudocolorAtts.pointSizeVarEnabled = 0
    vis.PseudocolorAtts.pointSizeVar = "default"
    vis.PseudocolorAtts.pointSizePixels = 2
    vis.PseudocolorAtts.lineStyle = vis.PseudocolorAtts.SOLID  # SOLID, DASH, DOT, DOTDASH
    vis.PseudocolorAtts.lineWidth = 0
    vis.PseudocolorAtts.opacityType = vis.PseudocolorAtts.Explicit  # Explicit, ColorTable
    vis.SetPlotOptions(vis.PseudocolorAtts)

    vis.SetActivePlots(0)
    vis.AddOperator("Slice", 1)
    vis.SetActivePlots(0)
    vis.SliceAtts = vis.SliceAttributes()
    vis.SliceAtts.originType = vis.SliceAtts.Intercept  # Point, Intercept, Percent, Zone, Node
    vis.SliceAtts.originPoint = (0, 0, 0)
    vis.SliceAtts.originIntercept = 0
    vis.SliceAtts.originPercent = 0
    vis.SliceAtts.originZone = 0
    vis.SliceAtts.originNode = 0
    vis.SliceAtts.normal = (0, 0, 1)
    vis.SliceAtts.axisType = vis.SliceAtts.ZAxis  # XAxis, YAxis, ZAxis, Arbitrary, ThetaPhi
    vis.SliceAtts.upAxis = (0, 1, 0)
    vis.SliceAtts.project2d = 1
    vis.SliceAtts.interactive = 1
    vis.SliceAtts.flip = 0
    vis.SliceAtts.originZoneDomain = 0
    vis.SliceAtts.originNodeDomain = 0
    vis.SliceAtts.meshName = "SpatialGrid"
    vis.SliceAtts.theta = 0
    vis.SliceAtts.phi = 90
    vis.SetOperatorOptions(vis.SliceAtts, 1)
    vis.DrawPlots()

    if _endFrame == -1:
        _endFrame = vis.TimeSliderGetNStates() - 1

    if _startFrame == -1:
        _startFrame = 0

    # Iterate through frames
    for i in xrange(_startFrame, _endFrame + 1):
        vis.SetTimeSliderState(i)
        frame = i - _startFrame
        vis.SaveWindowAtts = vis.SaveWindowAttributes()
        vis.SaveWindowAtts.outputToCurrentDirectory = 0
        vis.SaveWindowAtts.outputDirectory = _outputDir
        vis.SaveWindowAtts.fileName = _outputFileName
        vis.SaveWindowAtts.family = 1
        vis.SaveWindowAtts.format = vis.SaveWindowAtts.PNG  # BMP, CURVE, JPEG, OBJ, PNG, POSTSCRIPT, POVRAY, PPM, RGB, STL, TIFF, ULTRA, VTK, PLY
        vis.SaveWindowAtts.width = 3000
        vis.SaveWindowAtts.height = 300
        vis.SaveWindowAtts.screenCapture = 0
        vis.SaveWindowAtts.saveTiled = 0
        vis.SaveWindowAtts.quality = 100
        vis.SaveWindowAtts.progressive = 0
        vis.SaveWindowAtts.binary = 0
        vis.SaveWindowAtts.stereo = 0
        vis.SaveWindowAtts.compression = vis.SaveWindowAtts.PackBits  # None, PackBits, Jpeg, Deflate
        vis.SaveWindowAtts.forceMerge = 0
        vis.SaveWindowAtts.resConstraint = vis.SaveWindowAtts.ScreenProportions  # NoConstraint, EqualWidthHeight, ScreenProportions
        vis.SaveWindowAtts.advancedMultiWindowSave = 0
        vis.SetSaveWindowAttributes(vis.SaveWindowAtts)
        vis.SaveWindow()
    vis.DeleteActivePlots()
    vis.CloseDatabase(databaseName)
    # Make the movie:
    #subprocess.call("./moviecompilescript.sh " + _outputDir + " " + _outputFileName)
    pyVisitPath = "pyVisit/"
    #subprocess.call(pythonLibDirectoryPath + pyVisitPath + "moviecompilescript.sh")
    #subprocess.call(pythonLibDirectoryPath + pyVisitPath + "moviecompilescript.sh " + _outputDir + " " + _outputFileName)
    frameRate = "10"
    subprocess.call([
        pythonLibDirectoryPath + pyVisitPath + "moviecompilescript.sh",
        _outputDir, _outputFileName, frameRate
    ])
Exemplo n.º 12
0
def make_moving_frame_of_reference_movie(x_begin,
                                         x_end,
                                         y_begin,
                                         y_end,
                                         speed_x,
                                         speed_y,
                                         variable_name,
                                         minThreshold,
                                         maxThreshold,
                                         input_directory,
                                         input_file_name,
                                         output_directory,
                                         output_file_name,
                                         color_table="hot_desaturated",
                                         start_frame=-1,
                                         end_frame=-1,
                                         frame_skip_dt=1.0):
    '''
   Function for making a movie with a moving frame of reference.
   :param x_begin             The starting frame's beginning x-coordinate
   :param x_end               The starting frame's ending x-coordinate
   :param y_begin             The starting frame's beginning x-coordinate
   :param y_end               The starting frame's ending y-coordinate
   :param speed_x             The speed at which the frame moves in the x direction
   :param speed_y             The speed at which the frame moves in the y direction
   :param variable_name       Name of the variable (For ex \"rho\")
   :param minThreshold        Minimum threshold for the variable
   :param maxThreshold        Maximum threshold for the variable
   :param input_directory     The path to the directory where the files are
   :param input_file_name     Name of the files (For ex \"bulk.*.silo\")
   :param output_directory    Directory where to output the movie
   :param output_file_name    Name of the outputted file (For ex \"RHOMOVIE\")
   :param color_table         Name of the color table (\"hot_desaturated\" by default)
   :param start_frame         Starting frame for the movie (if -1, equals 0, -1 by default)
   :param end_frame           Ending frame for the movie (if -1, equals the last frame, -1 by default)
   :param frame_skip_dt       The number of seconds one skip in frame equals (1.0 by default) (Note: This may change depending on the run and should always be checked)
   '''
    # OPTIONS
    #################################################################
    # Input the boundary box for starting coordinates (Starting values)
    startX = x_begin  # The left x-boundary of the box
    endX = x_end  # The right x-boundary of the box
    startY = y_begin  # The bottom y-boundary of the box
    endY = y_end  # The upper y-boundary of the box

    # Input frame properties
    startFrame = start_frame  # Note: if startFrame is set to -1 the start frame gets set to 0
    endFrame = end_frame  # Note: if endFrame is set to -1 the endFrame is automatically the number of frames in the database
    frameInSeconds = frame_skip_dt  # Set how many seconds one frame skip is

    # Input speed in x and y direction
    speedX = speed_x  # Meters per second
    speedY = speed_y  # Meters per second

    # Input variable
    variableName = variable_name
    minVariableValue = minThreshold
    maxVariableValue = maxThreshold
    colorTableName = color_table

    # Input directory and file names
    outputDir = output_directory  # Set the output directory (Where .png s are saved)
    outputFileName = output_file_name  # The file names for the png files. These for ex. will be saved visit0000.png, visit0001.png, .
    databaseName = "localhost:" + input_directory + input_file_name + " database"  # For navigating to the silo files
    # visitBinDirectory = "/usr/local/visit/bin" #Nevermind this
    # Note: a slice of the plot in z-axis is taken automatically
    #################################################################

    # Launch visit
    visitBinDirectory = '/home/htest/visit/bin'
    vis.LaunchNowin(vdir=visitBinDirectory)
    dx = speedX * frameInSeconds  # Note: This is in meters per frame!
    dy = speedY * frameInSeconds  # Note: This is in meters per frame!
    #Set up window and annotations
    vis.OpenDatabase(databaseName, 0)
    #Load settings
    visSettings.load_visit_settings()

    vis.AddPlot("Pseudocolor", variableName, 1, 1)
    vis.SetActivePlots(0)
    vis.PseudocolorAtts = vis.PseudocolorAttributes()
    vis.PseudocolorAtts.legendFlag = 1
    vis.PseudocolorAtts.lightingFlag = 1
    vis.PseudocolorAtts.minFlag = 1
    vis.PseudocolorAtts.maxFlag = 1
    vis.PseudocolorAtts.centering = vis.PseudocolorAtts.Natural  # Natural, Nodal, Zonal
    vis.PseudocolorAtts.scaling = vis.PseudocolorAtts.Linear  # Linear, Log, Skew
    vis.PseudocolorAtts.limitsMode = vis.PseudocolorAtts.CurrentPlot  # OriginalData, CurrentPlot
    vis.PseudocolorAtts.min = minVariableValue
    vis.PseudocolorAtts.max = maxVariableValue
    vis.PseudocolorAtts.pointSize = 0.05
    vis.PseudocolorAtts.pointType = vis.PseudocolorAtts.Point  # Box, Axis, Icosahedron, Point, Sphere
    vis.PseudocolorAtts.skewFactor = 1
    vis.PseudocolorAtts.opacity = 1
    vis.PseudocolorAtts.colorTableName = color_table
    vis.PseudocolorAtts.invertColorTable = 0
    vis.PseudocolorAtts.smoothingLevel = 0
    vis.PseudocolorAtts.pointSizeVarEnabled = 0
    vis.PseudocolorAtts.pointSizeVar = "default"
    vis.PseudocolorAtts.pointSizePixels = 2
    vis.PseudocolorAtts.lineStyle = vis.PseudocolorAtts.SOLID  # SOLID, DASH, DOT, DOTDASH
    vis.PseudocolorAtts.lineWidth = 0
    vis.PseudocolorAtts.opacityType = vis.PseudocolorAtts.Explicit  # Explicit, ColorTable
    vis.SetPlotOptions(vis.PseudocolorAtts)
    vis.SetActivePlots(0)
    vis.AddOperator("Slice", 1)
    vis.AddOperator("Threshold", 1)
    vis.ThresholdAtts = vis.ThresholdAttributes()
    vis.ThresholdAtts.outputMeshType = 0
    vis.ThresholdAtts.listedVarNames = ("Boundary_type")
    vis.ThresholdAtts.zonePortions = (1)
    vis.ThresholdAtts.lowerBounds = (1)
    vis.ThresholdAtts.upperBounds = (1)
    vis.ThresholdAtts.defaultVarName = variableName
    vis.ThresholdAtts.defaultVarIsScalar = 1
    vis.SetOperatorOptions(vis.ThresholdAtts, 1)
    vis.ThresholdAtts = vis.ThresholdAttributes()
    vis.ThresholdAtts.outputMeshType = 0
    vis.ThresholdAtts.listedVarNames = ("Boundary_type")
    vis.ThresholdAtts.zonePortions = (1)
    vis.ThresholdAtts.lowerBounds = (1)
    vis.ThresholdAtts.upperBounds = (1)
    vis.ThresholdAtts.defaultVarName = variableName
    vis.ThresholdAtts.defaultVarIsScalar = 1
    vis.SetOperatorOptions(vis.ThresholdAtts, 1)
    vis.SetActivePlots(0)
    vis.SliceAtts = vis.SliceAttributes()
    vis.SliceAtts.originType = vis.SliceAtts.Intercept  # Point, Intercept, Percent, Zone, Node
    vis.SliceAtts.originPoint = (0, 0, 0)
    vis.SliceAtts.originIntercept = 0
    vis.SliceAtts.originPercent = 0
    vis.SliceAtts.originZone = 0
    vis.SliceAtts.originNode = 0
    vis.SliceAtts.normal = (0, 0, 1)
    vis.SliceAtts.axisType = vis.SliceAtts.ZAxis  # XAxis, YAxis, ZAxis, Arbitrary, ThetaPhi
    vis.SliceAtts.upAxis = (0, 1, 0)
    vis.SliceAtts.project2d = 1
    vis.SliceAtts.interactive = 1
    vis.SliceAtts.flip = 0
    vis.SliceAtts.originZoneDomain = 0
    vis.SliceAtts.originNodeDomain = 0
    vis.SliceAtts.meshName = "SpatialGrid"
    vis.SliceAtts.theta = 0
    vis.SliceAtts.phi = 90
    vis.SetOperatorOptions(vis.SliceAtts, 1)
    vis.DrawPlots()

    if endFrame == -1:
        endFrame = vis.TimeSliderGetNStates() - 1

    if startFrame == -1:
        startFrame = 0

    # Iterate through frames
    for i in xrange(startFrame, endFrame + 1):
        vis.SetTimeSliderState(i)
        frame = i - startFrame
        vis.View2DAtts = vis.View2DAttributes()
        vis.View2DAtts.windowCoords = (startX + frame * dx, endX + frame * dx,
                                       startY + frame * dy, endY + frame * dy)
        vis.View2DAtts.viewportCoords = (0.2, 0.95, 0.15, 0.95)
        vis.View2DAtts.fullFrameActivationMode = vis.View2DAtts.Auto  # On, Off, Auto
        vis.View2DAtts.fullFrameAutoThreshold = 100
        vis.View2DAtts.xScale = vis.View2DAtts.LINEAR  # LINEAR, LOG
        vis.View2DAtts.yScale = vis.View2DAtts.LINEAR  # LINEAR, LOG
        vis.View2DAtts.windowValid = 1
        vis.SetView2D(vis.View2DAtts)
        vis.SaveWindowAtts = vis.SaveWindowAttributes()
        vis.SaveWindowAtts.outputToCurrentDirectory = 0
        vis.SaveWindowAtts.outputDirectory = outputDir
        vis.SaveWindowAtts.fileName = outputFileName
        vis.SaveWindowAtts.family = 1
        vis.SaveWindowAtts.format = vis.SaveWindowAtts.PNG  # BMP, CURVE, JPEG, OBJ, PNG, POSTSCRIPT, POVRAY, PPM, RGB, STL, TIFF, ULTRA, VTK, PLY
        vis.SaveWindowAtts.width = 1024
        vis.SaveWindowAtts.height = 1024
        vis.SaveWindowAtts.screenCapture = 0
        vis.SaveWindowAtts.saveTiled = 0
        vis.SaveWindowAtts.quality = 100
        vis.SaveWindowAtts.progressive = 0
        vis.SaveWindowAtts.binary = 0
        vis.SaveWindowAtts.stereo = 0
        vis.SaveWindowAtts.compression = vis.SaveWindowAtts.PackBits  # None, PackBits, Jpeg, Deflate
        vis.SaveWindowAtts.forceMerge = 0
        vis.SaveWindowAtts.resConstraint = vis.SaveWindowAtts.ScreenProportions  # NoConstraint, EqualWidthHeight, ScreenProportions
        vis.SaveWindowAtts.advancedMultiWindowSave = 0
        vis.SetSaveWindowAttributes(vis.SaveWindowAtts)
        vis.SaveWindow()
    vis.DeleteActivePlots()
    vis.CloseDatabase(databaseName)
    # Make the movie:
    framerate = 7
    subprocess.call([
        pythonLibDirectoryPath + pyVisitPath + "moviecompilescript.sh",
        outputDir, outputFileName, framerate
    ])
Exemplo n.º 13
0
def make_moving_frame_of_reference_line_plot(  point1, point2, velocity, variable_name, input_directory, input_file_name, output_directory, output_file_name, start_frame=-1, end_frame=-1, frame_skip_dt=1.0 ):
   '''
   Function for making a line plot of some variable with a moving frame of reference
   :param point1              The starting point of the line (must be an array of size 3)
   :param point2              The ending point of the line (must be an array of size 3)
   :param velocity            The velocity vector of the frame of reference (must be an array of size 3)
   :param variable_name       Name of the variable (For ex \"rho\")
   :param input_directory     The path to the directory where the files are
   :param input_file_name     Name of the files (For ex \"bulk.*.silo\")
   :param output_directory    Directory where to output the movie
   :param output_file_name    Name of the outputted file (For ex \"RHOMOVIE\")
   :param start_frame         Starting frame for the movie (if -1, equals 0, -1 by default)
   :param end_frame           Ending frame for the movie (if -1, equals the last frame, -1 by default)
   :param frame_skip_dt       The number of seconds one skip in frame equals (1.0 by default) (Note: This may change depending on the run and should always be checked)
   '''
   if len(point1) != 3 or len(point2) != 3 or len(velocity) != 3:
      print("BAD INPUT IN make_moving_frame_of_reference_line_plot, POINT1, POINT2 AND VELOCITY MUST BE ARRAYS OF SIZE 3")
   
   # OPTIONS
   #################################################################
   # Input the boundary box for starting coordinates (Starting values)
   startX = point1[0] # The left x-boundary of the box
   endX = point2[0] # The right x-boundary of the box
   startY = point1[1] # The bottom y-boundary of the box
   endY = point2[1] # The upper y-boundary of the box
   startZ = poin1[2] # The left z-boundary of the box
   endZ = point2[2] # The right z-boundary of the box
   
   # Input frame properties
   startFrame = start_frame # Note: if startFrame is set to -1 the start frame gets set to 0
   endFrame = end_frame # Note: if endFrame is set to -1 the endFrame is automatically the number of frames in the database
   frameInSeconds = frame_skip_dt # Set how many seconds one frame skip is

   screenWidth = 3000
   screenHeight = 3000
   
   # Input speed in x and y direction
   speedX = velocity[0] # Meters per second
   speedY = velocity[1] # Meters per second
   speedZ = velocity[2] # Meters per second

   # Input variable name
   # Note: needs to have operators/Lineout/ for visit to recognize it as line plot. Additionally, visit does not accept any '/' in the variable name which is why they're removed. The curve definitions are in loadvisitsettings.py and in there the curve expressions are defined so that there's no '/' in the variable name
   variableName = "operators/Lineout/" + variable_name.replace("/","")
   
   # Input directory and file names
   outputDir = output_directory # Set the output directory (Where .png s are saved)
   outputFileName = output_file_name # The file names for the png files. These for ex. will be saved visit0000.png, visit0001.png, ..
   databaseName = "localhost:" + input_directory + input_file_name + " database" # For navigating to the silo files
   # visitBinDirectory = "/usr/lvariableNameocal/visit/bin" #Nevermind this
   # Note: a slice of the plot in z-axis is taken automatically
   #################################################################
   
   
   dx = speedX * frameInSeconds # Note: This is in meters per frame!
   dy = speedY * frameInSeconds # Note: This is in meters per frame!
   dz = speedZ * frameInSeconds # Note: This is in meters per frame!
   
   
   
   vis.OpenDatabase(databaseName, 0)
   #Load settings
   visSettings.load_visit_settings()

   vis.AddPlot("Curve", variableName, 1, 1)
   vis.LineoutAtts = vis.LineoutAttributes()
   vis.LineoutAtts.point1 = (startX, startY, 0)
   vis.LineoutAtts.point2 = (endX, endY, 0)
   vis.LineoutAtts.interactive = 0
   vis.LineoutAtts.ignoreGlobal = 0
   vis.LineoutAtts.samplingOn = 0
   vis.LineoutAtts.numberOfSamplePoints = 50
   vis.LineoutAtts.reflineLabels = 0
   vis.SetOperatorOptions(vis.LineoutAtts, 1)
   vis.CurveAtts = vis.CurveAttributes()
   vis.CurveAtts.showLines = 1
   vis.CurveAtts.lineStyle = vis.CurveAtts.SOLID  # SOLID, DASH, DOT, DOTDASH
   vis.CurveAtts.lineWidth = 2
   vis.CurveAtts.showPoints = 1
   vis.CurveAtts.symbol = vis.CurveAtts.Point  # Point, TriangleUp, TriangleDown, Square, Circle, Plus, X
   vis.CurveAtts.pointSize = 5
   vis.CurveAtts.pointFillMode = vis.CurveAtts.Static  # Static, Dynamic
   vis.CurveAtts.pointStride = 1
   vis.CurveAtts.symbolDensity = 50
   vis.CurveAtts.curveColorSource = vis.CurveAtts.Custom  # Cycle, Custom
   vis.CurveAtts.curveColor = (0, 0, 0, 255)
   vis.CurveAtts.showLegend = 1
   vis.CurveAtts.showLabels = 0
   vis.CurveAtts.designator = ""
   vis.CurveAtts.doBallTimeCue = 0
   vis.CurveAtts.ballTimeCueColor = (0, 0, 0, 255)
   vis.CurveAtts.timeCueBallSize = 0.01
   vis.CurveAtts.doLineTimeCue = 0
   vis.CurveAtts.lineTimeCueColor = (0, 0, 0, 255)
   vis.CurveAtts.lineTimeCueWidth = 0
   vis.CurveAtts.doCropTimeCue = 0
   vis.CurveAtts.timeForTimeCue = 0
   vis.SetPlotOptions(vis.CurveAtts)
   vis.DrawPlots()
   
   # Iterate through frames
   for i in range(startFrame, endFrame+1):
      vis.SetTimeSliderState(i)
      frame = i - startFrame
      vis.LineoutAtts = vis.LineoutAttributes()
      vis.LineoutAtts.point1 = (startX + frame*dx, startY + frame*dy, 0)
      vis.LineoutAtts.point2 = (endX + frame*dx, endY + frame*dy, 0)
      vis.LineoutAtts.interactive = 0
      vis.LineoutAtts.ignoreGlobal = 0
      vis.LineoutAtts.samplingOn = 0
      vis.LineoutAtts.numberOfSamplePoints = 50
      vis.LineoutAtts.reflineLabels = 0
      vis.SetOperatorOptions(vis.LineoutAtts, 1)
      vis.SaveWindowAtts = vis.SaveWindowAttributes()
      vis.SaveWindowAtts.outputToCurrentDirectory = 0
      vis.SaveWindowAtts.outputDirectory = outputDir
      vis.SaveWindowAtts.fileName = outputFileName
      vis.SaveWindowAtts.family = 1
      vis.SaveWindowAtts.format = vis.SaveWindowAtts.PNG  # BMP, CURVE, JPEG, OBJ, PNG, POSTSCRIPT, POVRAY, PPM, RGB, STL, TIFF, ULTRA, VTK, PLY
      vis.SaveWindowAtts.width = screenWidth
      vis.SaveWindowAtts.height = screenHeight
      vis.SaveWindowAtts.screenCapture = 0
      vis.SaveWindowAtts.saveTiled = 0
      vis.SaveWindowAtts.quality = 80
      vis.SaveWindowAtts.progressive = 0
      vis.SaveWindowAtts.binary = 0
      vis.SaveWindowAtts.stereo = 0
      vis.SaveWindowAtts.compression = vis.SaveWindowAtts.PackBits  # None, PackBits, Jpeg, Deflate
      vis.SaveWindowAtts.forceMerge = 0
      vis.SaveWindowAtts.resConstraint = vis.SaveWindowAtts.ScreenProportions  # NoConstraint, EqualWidthHeight, ScreenProportions
      vis.SaveWindowAtts.advancedMultiWindowSave = 0
      vis.SetSaveWindowAttributes(vis.SaveWindowAtts)
      vis.SaveWindow()
   vis.DeleteActivePlots()
   vis.CloseDatabase(databaseName)
   # Make the movie:
   framerate = 5
   subprocess.call([pythonLibDirectoryPath + pyVisitPath + "moviecompilescript.sh", outputDir, outputFileName, framerate])