def main(out_fname, in_fnames):
"""main(out_fname: str, in_fnames: list<str>) -> None
Combines all vistrails specified in in_fnames into a single vistrail
by renumbering their ids
"""
# FIXME this breaks when you use abstractions!
(save_bundle, vt_save_dir) = io.open_bundle_from_zip_xml(DBVistrail.vtType, in_fnames[0])
for in_fname in in_fnames[1:]:
(new_save_bundle, new_save_dir) = io.open_bundle_from_zip_xml(DBVistrail.vtType, in_fname)
vistrails.db.services.vistrail.merge(save_bundle, new_save_bundle, "", True, vt_save_dir, new_save_dir)
io.save_bundle_to_zip_xml(save_bundle, out_fname)
def main(out_fname, in_fnames):
"""main(out_fname: str, in_fnames: list<str>) -> None
Combines all vistrails specified in in_fnames into a single vistrail
by renumbering their ids
"""
# FIXME this breaks when you use abstractions!
(save_bundle,
vt_save_dir) = io.open_bundle_from_zip_xml(DBVistrail.vtType,
in_fnames[0])
for in_fname in in_fnames[1:]:
(new_save_bundle,
new_save_dir) = io.open_bundle_from_zip_xml(DBVistrail.vtType,
in_fname)
vistrails.db.services.vistrail.merge(save_bundle, new_save_bundle, "",
True, vt_save_dir, new_save_dir)
io.save_bundle_to_zip_xml(save_bundle, out_fname)
def testParamexp(self):
"""test translating parameter explorations from 1.0.3 to 1.0.2"""
from vistrails.db.services.io import open_bundle_from_zip_xml
from vistrails.core.system import vistrails_root_directory
import os
(save_bundle, vt_save_dir) = open_bundle_from_zip_xml(DBVistrail.vtType, \
os.path.join(vistrails_root_directory(),
'tests/resources/paramexp-1.0.3.vt'))
vistrail = translateVistrail(save_bundle.vistrail)
def testVistrailvars(self):
"""test translating vistrail variables from 1.0.3 to 1.0.2"""
from vistrails.db.services.io import open_bundle_from_zip_xml
from vistrails.core.system import vistrails_root_directory
import os
(save_bundle, vt_save_dir) = open_bundle_from_zip_xml(DBVistrail.vtType, \
os.path.join(vistrails_root_directory(),
'tests/resources/visvar-1.0.3.vt'))
vistrail = translateVistrail(save_bundle.vistrail)
visvars = vistrail.db_annotations_key_index['__vistrail_vars__']
self.assertTrue(visvars.db_value)
def load(self, type):
fname = self.get_temporary()
if fname:
from vistrails.db.domain import DBVistrail
obj = io.open_from_xml(fname, type)
return SaveBundle(DBVistrail.vtType, obj)
else:
(save_bundle, tmp_dir) = io.open_bundle_from_zip_xml(type, self._name)
self.tmp_dir = tmp_dir
for obj in save_bundle.get_db_objs():
obj.locator = self
return save_bundle
def load(self, type):
fname = self.get_temporary()
if fname:
from vistrails.db.domain import DBVistrail
obj = io.open_from_xml(fname, type)
return SaveBundle(DBVistrail.vtType, obj)
else:
(save_bundle, tmp_dir) = io.open_bundle_from_zip_xml(type, self._name)
self.tmp_dir = tmp_dir
for obj in save_bundle.get_db_objs():
obj.locator = self
return save_bundle
def testVistrailvars(self):
"""test translating vistrail variables from 1.0.2 to 1.0.3"""
from vistrails.db.services.io import open_bundle_from_zip_xml
from vistrails.core.system import vistrails_root_directory
import os
(save_bundle, vt_save_dir) = open_bundle_from_zip_xml(DBVistrail.vtType, \
os.path.join(vistrails_root_directory(),
'tests/resources/visvar-1.0.2.vt'))
vistrail = translateVistrail(save_bundle.vistrail)
visvars = vistrail.db_vistrailVariables
self.assertEqual(len(visvars), 2)
self.assertNotEqual(visvars[0].db_name, visvars[1].db_name)
def testVistrailvars(self):
"""test translating vistrail variables from 1.0.2 to 1.0.3"""
from vistrails.db.services.io import open_bundle_from_zip_xml
from vistrails.core.system import vistrails_root_directory
import os
(save_bundle, vt_save_dir) = open_bundle_from_zip_xml(DBVistrail.vtType, \
os.path.join(vistrails_root_directory(),
'tests/resources/visvar-1.0.2.vt'))
vistrail = translateVistrail(save_bundle.vistrail)
visvars = vistrail.db_vistrailVariables
self.assertEqual(len(visvars), 2)
self.assertNotEqual(visvars[0].db_name, visvars[1].db_name)
def testParamexp(self):
"""test translating parameter explorations from 1.0.2 to 1.0.3"""
from vistrails.db.services.io import open_bundle_from_zip_xml
from vistrails.core.system import vistrails_root_directory
import os
(save_bundle, vt_save_dir) = open_bundle_from_zip_xml(
DBVistrail.vtType, os.path.join(vistrails_root_directory(), "tests/resources/paramexp-1.0.2.vt")
)
vistrail = translateVistrail(save_bundle.vistrail)
pes = vistrail.db_get_parameter_explorations()
self.assertEqual(len(pes), 1)
funs = pes[0].db_functions
self.assertEqual(set([f.db_port_name for f in funs]), set(["SetCoefficients", "SetBackgroundWidget"]))
parameters = funs[0].db_parameters
self.assertEqual(len(parameters), 10)
def testParamexp(self):
"""test translating parameter explorations from 1.0.2 to 1.0.3"""
from vistrails.db.services.io import open_bundle_from_zip_xml
from vistrails.core.system import vistrails_root_directory
import os
(save_bundle, vt_save_dir) = open_bundle_from_zip_xml(DBVistrail.vtType, \
os.path.join(vistrails_root_directory(),
'tests/resources/paramexp-1.0.2.vt'))
vistrail = translateVistrail(save_bundle.vistrail)
pes = vistrail.db_get_parameter_explorations()
self.assertEqual(len(pes), 1)
funs = pes[0].db_functions
self.assertEqual(set(f.db_port_name for f in funs),
set(['SetCoefficients', 'SetBackgroundWidget']))
parameters = funs[0].db_parameters
self.assertEqual(len(parameters), 10)
