def loadPolyData(filename):
'''Load a file and return a vtkPolyData object (not a vtkActor).'''
if not os.path.exists(filename):
colors.printc('Error in loadPolyData: Cannot find', filename, c=1)
return None
fl = filename.lower()
if fl.endswith('.vtk') or fl.endswith('.vtp'):
reader = vtk.vtkPolyDataReader()
elif fl.endswith('.ply'):
reader = vtk.vtkPLYReader()
elif fl.endswith('.obj'):
reader = vtk.vtkOBJReader()
elif fl.endswith('.stl'):
reader = vtk.vtkSTLReader()
elif fl.endswith('.byu') or fl.endswith('.g'):
reader = vtk.vtkBYUReader()
elif fl.endswith('.vtp'):
reader = vtk.vtkXMLPolyDataReader()
elif fl.endswith('.vts'):
reader = vtk.vtkXMLStructuredGridReader()
elif fl.endswith('.vtu'):
reader = vtk.vtkXMLUnstructuredGridReader()
elif fl.endswith('.txt'):
reader = vtk.vtkParticleReader() # (x y z scalar)
elif fl.endswith('.xyz'):
reader = vtk.vtkParticleReader()
else:
reader = vtk.vtkDataReader()
reader.SetFileName(filename)
if fl.endswith('.vts'): # structured grid
reader.Update()
gf = vtk.vtkStructuredGridGeometryFilter()
gf.SetInputConnection(reader.GetOutputPort())
gf.Update()
poly = gf.GetOutput()
elif fl.endswith('.vtu'): # unstructured grid
reader.Update()
gf = vtk.vtkGeometryFilter()
gf.SetInputConnection(reader.GetOutputPort())
gf.Update()
poly = gf.GetOutput()
else:
try:
reader.Update()
poly = reader.GetOutput()
except:
poly = None
if not poly:
return None
cleanpd = vtk.vtkCleanPolyData()
cleanpd.SetInputData(poly)
cleanpd.Update()
return cleanpd.GetOutput()
def main():
filename = get_program_parameters()
# Particles.raw supplied by VTK is big endian encoded
# Read the file
reader = vtk.vtkParticleReader()
reader.SetFileName(filename)
# if nothing gets displayed or totally wrong, swap the endianness
reader.SetDataByteOrderToBigEndian()
reader.Update()
# Visualize
mapper = vtk.vtkPolyDataMapper()
mapper.SetInputConnection(reader.GetOutputPort())
print("number of pieces:", mapper.GetNumberOfPieces())
mapper.SetScalarRange(4, 9)
actor = vtk.vtkActor()
actor.SetMapper(mapper)
actor.GetProperty().SetPointSize(4)
renderer = vtk.vtkRenderer()
render_window = vtk.vtkRenderWindow()
render_window.AddRenderer(renderer)
render_window_interactor = vtk.vtkRenderWindowInteractor()
render_window_interactor.SetRenderWindow(render_window)
renderer.AddActor(actor)
named_colors = vtk.vtkNamedColors()
renderer.SetBackground(named_colors.GetColor3d("Azure"))
render_window.Render()
render_window_interactor.Start()
def __init__(self, module_manager):
SimpleVTKClassModuleBase.__init__(
self, module_manager,
vtk.vtkParticleReader(), 'Reading vtkParticle.',
(), ('vtkParticle',),
replaceDoc=True,
inputFunctions=None, outputFunctions=None)
def loadPoly(filename):
'''Return a vtkPolyData object, NOT a vtkActor'''
if not os.path.exists(filename):
vc.printc(('Error in loadPoly: Cannot find', filename), c=1)
return None
fl = filename.lower()
if '.vtk' in fl: reader = vtk.vtkPolyDataReader()
elif '.ply' in fl: reader = vtk.vtkPLYReader()
elif '.obj' in fl: reader = vtk.vtkOBJReader()
elif '.stl' in fl: reader = vtk.vtkSTLReader()
elif '.byu' in fl or '.g' in fl: reader = vtk.vtkBYUReader()
elif '.vtp' in fl: reader = vtk.vtkXMLPolyDataReader()
elif '.vts' in fl: reader = vtk.vtkXMLStructuredGridReader()
elif '.vtu' in fl: reader = vtk.vtkXMLUnstructuredGridReader()
elif '.txt' in fl: reader = vtk.vtkParticleReader() # (x y z scalar)
elif '.xyz' in fl: reader = vtk.vtkParticleReader()
else: reader = vtk.vtkDataReader()
reader.SetFileName(filename)
reader.Update()
if '.vts' in fl: # structured grid
gf = vtk.vtkStructuredGridGeometryFilter()
gf.SetInputConnection(reader.GetOutputPort())
gf.Update()
poly = gf.GetOutput()
elif '.vtu' in fl: # unstructured grid
gf = vtk.vtkGeometryFilter()
gf.SetInputConnection(reader.GetOutputPort())
gf.Update()
poly = gf.GetOutput()
else:
poly = reader.GetOutput()
if not poly:
vc.printc(('Unable to load', filename), c=1)
return False
cleanpd = vtk.vtkCleanPolyData()
vu.setInput(cleanpd, poly)
cleanpd.Update()
return cleanpd.GetOutput()
def _load_file(filename, c, alpha, threshold, spacing, unpack):
fl = filename.lower()
################################################################# other formats:
if fl.endswith(".xml") or fl.endswith(".xml.gz") or fl.endswith(".xdmf"):
# Fenics tetrahedral file
actor = loadDolfin(filename)
elif fl.endswith(".neutral") or fl.endswith(".neu"): # neutral tetrahedral file
actor = loadNeutral(filename)
elif fl.endswith(".gmsh"): # gmesh file
actor = loadGmesh(filename)
elif fl.endswith(".pcd"): # PCL point-cloud format
actor = loadPCD(filename)
actor.GetProperty().SetPointSize(2)
elif fl.endswith(".off"):
actor = loadOFF(filename)
elif fl.endswith(".3ds"): # 3ds format
actor = load3DS(filename)
elif fl.endswith(".wrl"):
importer = vtk.vtkVRMLImporter()
importer.SetFileName(filename)
importer.Read()
importer.Update()
actors = importer.GetRenderer().GetActors() #vtkActorCollection
actors.InitTraversal()
wacts = []
for i in range(actors.GetNumberOfItems()):
act = actors.GetNextActor()
wacts.append(act)
actor = Assembly(wacts)
################################################################# volumetric:
elif fl.endswith(".tif") or fl.endswith(".slc") or fl.endswith(".vti") \
or fl.endswith(".mhd") or fl.endswith(".nrrd") or fl.endswith(".nii") \
or fl.endswith(".dem"):
img = loadImageData(filename, spacing)
if threshold is False:
if c is None and alpha == 1:
c = ['b','lb','lg','y','r'] # good for blackboard background
alpha = (0.0, 0.0, 0.2, 0.4, 0.8, 1)
actor = Volume(img, c, alpha)
else:
actor = Volume(img).isosurface(threshold=threshold)
actor.color(c).alpha(alpha)
################################################################# 2D images:
elif fl.endswith(".png") or fl.endswith(".jpg") or fl.endswith(".bmp") or fl.endswith(".jpeg"):
if ".png" in fl:
picr = vtk.vtkPNGReader()
elif ".jpg" in fl or ".jpeg" in fl:
picr = vtk.vtkJPEGReader()
elif ".bmp" in fl:
picr = vtk.vtkBMPReader()
picr.SetFileName(filename)
picr.Update()
actor = Picture() # object derived from vtk.vtkImageActor()
actor.SetInputData(picr.GetOutput())
if alpha is None:
alpha = 1
actor.SetOpacity(alpha)
################################################################# multiblock:
elif fl.endswith(".vtm") or fl.endswith(".vtmb"):
read = vtk.vtkXMLMultiBlockDataReader()
read.SetFileName(filename)
read.Update()
mb = read.GetOutput()
if unpack:
acts = []
for i in range(mb.GetNumberOfBlocks()):
b = mb.GetBlock(i)
if isinstance(b, (vtk.vtkPolyData,
vtk.vtkImageData,
vtk.vtkUnstructuredGrid,
vtk.vtkStructuredGrid,
vtk.vtkRectilinearGrid)):
acts.append(b)
return acts
else:
return mb
################################################################# numpy:
elif fl.endswith(".npy"):
acts = loadNumpy(filename)
if unpack == False:
return Assembly(acts)
return acts
elif fl.endswith(".geojson") or fl.endswith(".geojson.gz"):
return loadGeoJSON(fl)
################################################################# polygonal mesh:
else:
if fl.endswith(".vtk"): # read all legacy vtk types
#output can be:
# PolyData, StructuredGrid, StructuredPoints, UnstructuredGrid, RectilinearGrid
reader = vtk.vtkDataSetReader()
reader.ReadAllScalarsOn()
reader.ReadAllVectorsOn()
reader.ReadAllTensorsOn()
reader.ReadAllFieldsOn()
reader.ReadAllNormalsOn()
reader.ReadAllColorScalarsOn()
elif fl.endswith(".ply"):
reader = vtk.vtkPLYReader()
elif fl.endswith(".obj"):
reader = vtk.vtkOBJReader()
elif fl.endswith(".stl"):
reader = vtk.vtkSTLReader()
elif fl.endswith(".byu") or fl.endswith(".g"):
reader = vtk.vtkBYUReader()
elif fl.endswith(".foam"): # OpenFoam
reader = vtk.vtkOpenFOAMReader()
elif fl.endswith(".pvd"):
reader = vtk.vtkXMLGenericDataObjectReader()
elif fl.endswith(".vtp"):
reader = vtk.vtkXMLPolyDataReader()
elif fl.endswith(".vts"):
reader = vtk.vtkXMLStructuredGridReader()
elif fl.endswith(".vtu"):
reader = vtk.vtkXMLUnstructuredGridReader()
elif fl.endswith(".vtr"):
reader = vtk.vtkXMLRectilinearGridReader()
elif fl.endswith(".pvtk"):
reader = vtk.vtkPDataSetReader()
elif fl.endswith(".pvtr"):
reader = vtk.vtkXMLPRectilinearGridReader()
elif fl.endswith("pvtu"):
reader = vtk.vtkXMLPUnstructuredGridReader()
elif fl.endswith(".txt") or fl.endswith(".xyz"):
reader = vtk.vtkParticleReader() # (format is x, y, z, scalar)
elif fl.endswith(".facet"):
reader = vtk.vtkFacetReader()
else:
return None
reader.SetFileName(filename)
reader.Update()
routput = reader.GetOutput()
if not routput:
colors.printc("~noentry Unable to load", filename, c=1)
return None
actor = Actor(routput, c, alpha)
if fl.endswith(".txt") or fl.endswith(".xyz"):
actor.GetProperty().SetPointSize(4)
actor.filename = filename
return actor
# tex = "D:\\images.jpg" # readertex = vtk.vtkJPEGReader() # readertex.SetFileName(tex) # texture = vtk.vtkTexture() # texture.SetInputConnection(readertex.GetOutputPort()) ############################################################ # readers readerSTL = vtk.vtkSTLReader() readerSTL.SetFileName(filenameBoat) # reader.Update() readerWSTL = vtk.vtkSTLReader() readerWSTL.SetFileName(filenameWaterSTL) readerP = vtk.vtkParticleReader() readerP.SetFileName(filenameWater) # filenameWater #filenameCover readerP.SetDataByteOrderToBigEndian() readerP.Update() # mappers mapperSTL = vtk.vtkPolyDataMapper() mapperSTL.SetInputConnection(readerSTL.GetOutputPort()) mapperWSTL = vtk.vtkPolyDataMapper() mapperWSTL.SetInputConnection(readerWSTL.GetOutputPort()) mapperP = vtk.vtkPolyDataMapper() mapperP.SetInputConnection(readerP.GetOutputPort()) mapperP.SetScalarRange(0.0, 999.9) # (0.0, 999.9) #(0.1, 1.0)
#!/usr/bin/env python
import vtk
from vtk.test import Testing
from vtk.util.misc import vtkGetDataRoot
VTK_DATA_ROOT = vtkGetDataRoot()
# Create the RenderWindow, Renderer and both Actors
#
ren1 = vtk.vtkRenderer()
renWin = vtk.vtkRenderWindow()
renWin.AddRenderer(ren1)
iren = vtk.vtkRenderWindowInteractor()
iren.SetRenderWindow(renWin)
reader = vtk.vtkParticleReader()
reader.SetFileName("" + str(VTK_DATA_ROOT) + "/Data/Particles.raw")
reader.SetDataByteOrderToBigEndian()
mapper = vtk.vtkPolyDataMapper()
mapper.SetInputConnection(reader.GetOutputPort())
mapper.SetScalarRange(4,9)
mapper.SetPiece(1)
mapper.SetNumberOfPieces(2)
actor = vtk.vtkActor()
actor.SetMapper(mapper)
actor.GetProperty().SetPointSize(2.5)
# Add the actors to the renderer, set the background and size
#
ren1.AddActor(actor)
ren1.SetBackground(0,0,0)
renWin.SetSize(200,200)
# Get handles to some useful objects
#
__license__ = "BSD <http://opensource.org/licenses/bsd-license.php>"
from glob import glob
from optparse import OptionParser
from os import name, path
from vtk import vtkParticleReader, vtkXMLPolyDataWriter
def get_filenames():
"""Return a list of filenames to process."""
parser = OptionParser(usage='%prog INPUT_FILES',
description=' '.join(__doc__.split()),
version=__version__)
(opts, args) = parser.parse_args()
if name == 'nt':
args = glob(args[0])
return args
if __name__ == '__main__':
for in_filename in get_filenames():
out_filename = '.'.join([path.splitext(path.split(in_filename)[-1])[0],
'vtp'])
reader = vtkParticleReader()
reader.SetFileName(in_filename)
writer = vtkXMLPolyDataWriter()
writer.SetFileName(out_filename)
writer.SetInputConnection(reader.GetOutputPort())
writer.Write()
print "Saved file: %s" % out_filename