def initialize_wiki():
try:
root = URLPath.root()
except NoRootURL:
print("Root URL not found, creating...")
root = URLPath.create_root(title="QUOREM Wiki",
content=get_content_from_file(
"quorem/static/markdown/docs/root.md"))
article_revision = ArticleRevision(
title=root.article.current_revision.title,
content=get_content_from_file("quorem/static/markdown/docs/root.md"))
root.article.add_revision(article_revision)
try:
investigation = URLPath.get_by_path("investigation")
except URLPath.DoesNotExist:
print("Investigation page not found, creating...")
URLPath.create_urlpath(root,
slug="investigation",
title="List of Investigations",
content="""This page lists the
investigations that are present in your QUOREM database. You may
edit anything on this page, except the Automated Report
section.\r\n\r\n""")
try:
protocol = URLPath.get_by_path("protocol")
except URLPath.DoesNotExist:
print("Protocol page not found, creating...")
URLPath.create_urlpath(root,
slug="protocol",
title="List of Protocols",
content="""This page lists the
protocols that are present in your QUOREM database. You may
edit anything on this page, except the Automated Report
section.\r\n\r\n""")
try:
pipeline = URLPath.get_by_path("pipeline")
except URLPath.DoesNotExist:
print("Pipeline page not found, creating...")
URLPath.create_urlpath(root,
slug="pipeline",
title="List of Pipelines",
content="""This page lists the
pipelines that are present in your QUOREM database. You may
edit anything on this page, except the Automated Report
section.\r\n\r\n""")
try:
sample = URLPath.get_by_path("sample")
except URLPath.DoesNotExist:
print("Sample page not found, creating...")
URLPath.create_urlpath(
root,
slug="sample",
title="List of Samples",
content=
"This page lists the samples that are present in your QUOREM database. You may edit anything on this page, except the Automated Report section.\r\n\r\n"
)
initialize_documentation(root)
def get_root(self):
try:
base_root = URLPath.get_by_path(path="")
except NoRootURL:
if (self.slug == "root") and (self.prefix == "/"):
root = URLPath.create_root(title="QUOREM Wiki",
content=self.content)
return root
else:
raise ValueError(
"No root created for prefix '%s'. Make sure root.md is processed first"
% (self.prefix, ))
try:
root = URLPath.get_by_path(self.prefix)
except URLPath.DoesNotExist:
if (self.slug == "root") and (self.prefix != "/"):
root = URLPath.create_urlpath(base_root,
slug=self.prefix,
title=self.title,
content=self.content)
else:
raise ValueError("No root created for prefix '%s'." %
(self.prefix, ))
return root
def _create_root(self):
root = URLPath.create_root(title="QUOR'em Wiki",
content=self.content)
return root
