def create_output_results(self,
storages,
update=False,
skip_missing=False):
"""
Create the set of output results produced by this analysis.
"""
results_name = results_import.pseudobulk_results_name_template.format(
jira_ticket=self.jira,
analysis_type=self.analysis_type,
library_id=self.args['library_id'],
sample_id=self.args['sample_id'],
)
results = results_import.create_dlp_results(
self.tantalus_api,
self.out_dir,
self.get_id(),
results_name,
self.get_input_samples(),
self.get_input_libraries(),
storages['working_results'],
update=update,
skip_missing=skip_missing,
)
return [results['id']]
def create_output_results(self,
storages,
update=False,
skip_missing=False):
"""
Create the set of output results produced by this analysis.
"""
### Results name
results_name = 'microscope_processed_{}'.format(
self.args['library_id'])
library_pk = self.tantalus_api.get(
'dna_library', library_id=self.args['library_id'])['id']
results = results_import.create_dlp_results(
self.tantalus_api,
self.out_dir,
self.get_id(),
results_name,
[],
[library_pk],
storages['working_results'],
update=update,
skip_missing=skip_missing,
)
return [results['id']]
def create_output_results(self, storages, update=False, skip_missing=False):
"""
Create the set of output results produced by this analysis.
"""
results = results_import.create_dlp_results(
self.tantalus_api,
self.out_dir,
self.get_id(),
'{}_{}'.format(self.jira, self.analysis_type),
self.get_input_samples(),
self.get_input_libraries(),
storages['working_results'],
update=update,
skip_missing=skip_missing,
)
return [results['id']]