def clear_all_data(self): self.XYjob = XY_Job() # XYjob may hold nonlinear fit object self.linear_fitL = [] # list of candidate linear fits self.selected_spline_objL = [] # list of candidate spline fits for pagename in ['Simple Fit', 'Exhaustive Fit']: self.pageD[pagename].selected_linfitL = [] self.pageD[pagename].Equations_Listbox.delete(0, END) self.pageD[pagename].Pcentstddev_Listbox.delete(0, END) self.pageD[pagename].Stddev_Listbox.delete(0, END) self.pageD['Data'].clear_all_data() self.pageD['Code Gen'].Listbox_1.delete(0, END) self.pageD['Math'].Listbox_1.delete(0, END) self.pageD['Spline'].Listbox_1.selection_clear(0, 5) # remove any constant entry widgets and pack_forget Improve Button self.pageD['Non-Linear Fit'].ImproveFit_Button.pack_forget() self.pageD['Non-Linear Fit'].SetConst_Button.pack_forget() for e in self.pageD['Non-Linear Fit'].constEntryWidgetL: e.pack_forget() del (e) for pagename in [ 'Data', 'Simple Fit', 'Spline', 'Math', 'Exhaustive Fit', 'Non-Linear Fit', 'Code Gen' ]: self.pageD[pagename].ShowHelp_Button_Click(None) self.pageD[pagename].pageFrame.update_idletasks() self.PlotWin.start_new_plot() #self.PlotWin.add_curve([1,2,3],[4,6,9], label='Sample Data', show_pts=1, show_line=1, # linewidth=2, markersize=20) #self.PlotWin.final_touches( title_str='Sample Plot', show_grid=True, show_legend=True) self.PlotWin.show_it()
def clear_all_data(self): self.XYjob = XY_Job() # XYjob may hold nonlinear fit object self.linear_fitL = [] # list of candidate linear fits self.selected_spline_objL = [] # list of candidate spline fits for pagename in ['Simple Fit','Exhaustive Fit']: self.pageD[pagename].selected_linfitL = [] self.pageD[pagename].Equations_Listbox.delete(0, END) self.pageD[pagename].Pcentstddev_Listbox.delete(0, END) self.pageD[pagename].Stddev_Listbox.delete(0, END) self.pageD['Data'].clear_all_data() self.pageD['Code Gen'].Listbox_1.delete(0, END) self.pageD['Math'].Listbox_1.delete(0, END) self.pageD['Spline'].Listbox_1.selection_clear(0, 5) # remove any constant entry widgets and pack_forget Improve Button self.pageD['Non-Linear Fit'].ImproveFit_Button.pack_forget() self.pageD['Non-Linear Fit'].SetConst_Button.pack_forget() for e in self.pageD['Non-Linear Fit'].constEntryWidgetL: e.pack_forget() del(e) for pagename in ['Data','Simple Fit','Spline','Math','Exhaustive Fit','Non-Linear Fit','Code Gen']: self.pageD[pagename].ShowHelp_Button_Click(None) self.pageD[pagename].pageFrame.update_idletasks() self.PlotWin.start_new_plot() #self.PlotWin.add_curve([1,2,3],[4,6,9], label='Sample Data', show_pts=1, show_line=1, # linewidth=2, markersize=20) #self.PlotWin.final_touches( title_str='Sample Plot', show_grid=True, show_legend=True) self.PlotWin.show_it()
A = 101124.977819 c = 1.00041249485 d = 2.23356723474e-05 n = 5.31856523127 x = altitude (m) y = Pressure (Pa) Correlation Coefficient = 0.999996135864 Standard Deviation = 88.761441745 Percent Standard Deviation = 0.094401748723% """ from numpy import array, double from xymath.xy_job import XY_Job from xymath.gui.xygui import main as run_gui XY = XY_Job() alt_mArr = array([ -1524, -1372, -1219, -1067, -914, -762, -610, -457, -305, -152, 0, 152, 305, 457, 610, 762, 914, 1067, 1219, 1372, 1524, 1829, 2134, 2438, 2743, 3048, 4572, 6096, 7620, 9144, 10668, 12192, 13716, 15240 ], dtype=double) PaArr = 1000.0 * array([ 121, 119, 117, 115, 113, 111, 109, 107, 105, 103, 101, 99.5, 97.7, 96, 94.2, 92.5, 90.8, 89.1, 87.5, 85.9, 84.3, 81.2, 78.2, 75.3, 72.4, 69.7, 57.2, 46.6, 37.6, 30.1, 23.8, 18.7, 14.5, 11.1 ], dtype=double)
4) Select "y = c0 + c1*x" to duplicate the author's results 5) Go to "Data" Tab 6) Select "weight" of data point with concentration=0.6 - Set that weight to 0.0 7) Go back to "Simple Fit" Tab and hit "Curve Fit" - Notice that the zero-weighted point is marked as such on the plot - As the author predicts, the fit is greatly improved - Surprisingly, XYmath shows the 3 term equation "y = c0 + c1*x + c2/x" to be superior to the 4 term equations as well as the quadratic. """ from numpy import array from xymath.dataset import DataSet from xymath.linfit import LinCurveFit from xymath.xy_job import XY_Job from xymath.gui.xygui import main as run_gui concL = [0.1,0.2,0.3,0.4,0.5,0.6,0.7,0.8,0.9,1] readingL = [1.54,2.03,3.17,3.67,4.89,6.73,6.74,7.87,8.86,10.35] DS = DataSet(concL, readingL, xName='Concentration', yName='Instrument Reading') print('\n\n') print('='*55) XY = XY_Job() XY.define_dataset(concL, readingL, wtArr=None, xName='Concentration', yName='Instrument Reading', xUnits='', yUnits='') run_gui( XY )
""" This example demonstrates the proper use of project: xymath """ import sys import os sys.path.insert( 0, os.path.abspath("../../")) # needed to find xymath development version from xymath.xy_job import XY_Job # TODO: create working example of project xymath my_class = XY_Job()
def __init__(self, master, XYjob_inp=None): self.initComplete = 0 #frame = Frame(master, width=753, height=536) #frame.pack() self.master = master self.allow_subWindows_to_close = 0 self.x, self.y, self.w, self.h = -1, -1, -1, -1 # bind master to <Configure> in order to handle any resizing, etc. # postpone self.master.bind("<Configure>", self.Master_Configure) self.master.bind('<Enter>', self.bindConfigure) self.master.title("XYmath") # make a Status Bar self.statusMessage = StringVar() self.statusMessage.set("") self.statusbar = Label(self.master, textvariable=self.statusMessage, bd=1, relief=SUNKEN) self.statusbar.pack(anchor=SW, fill=X, side=BOTTOM) self.statusMessage.set("Welcome to XYmath") self.menuBar = Menu(master, relief="raised", bd=2) top_File = Menu(self.menuBar, tearoff=0) top_File.add("command", label="New", command=self.menu_File_New) top_File.add("command", label="Open", command=self.menu_File_Open) top_File.add("command", label="Import", command=self.menu_File_Import) top_File.add("command", label="Save", command=self.menu_File_Save) top_File.add("command", label="Exit", command=self.menu_Program_Exit) self.menuBar.add("cascade", label="File", menu=top_File) self.menuBar.add("command", label="About", command=self.menu_About) self.tab_frames = TabFrames( self.master, height=460, width=650, tabPixelWidthL=[60, 90, 60, 60, 110, 110, 60, 90], labelL=[ 'Data', 'Simple Fit', 'Spline', 'Math', 'Exhaustive Fit', 'Non-Linear Fit', 'Plot', 'Code Gen' ]) self.tab_frames.pack(anchor=NW, fill=BOTH, side=TOP, expand=True) # Main window is finished, start building tab_frames pages self.pageD = {} # dictionary of tab_frames pages def setup_page(npage, PageObj): self.pageD[npage] = PageObj(self, self.tab_frames(npage)) self.pageD[str(self.tab_frames.labelL[npage])] = self.pageD[npage] self.tab_frames.setLeaveCallback( npage, self.pageD[npage].leavePageCallback) self.tab_frames.setSelectCallback( npage, self.pageD[npage].selectPageCallback) # setup pages setup_page(0, PageData) # setup page 0, Data page setup_page(1, SimplePage) # setup page 1, Simple Curve Fit setup_page(2, SplinePage) # setup page 2, Spline Curve Fit setup_page(3, MathPage) # setup page 3, Math Page setup_page(4, ExhaustPage) # setup page 4, Exhaustive Fit setup_page(5, NonLinFitPage) # setup page 5, Non-Linear Fit setup_page(6, PagePlot) # setup page 6, PagePlot setup_page(7, CodeGenPage) # setup page 7, Code Generation Page master.config(menu=self.menuBar) if XYjob_inp is None: self.XYjob = XY_Job() # XYjob may hold nonlinear fit object else: self.XYjob = XYjob_inp self.linear_fitL = [] # list of candidate linear fits self.selected_spline_objL = [] # list of candidate spline fits if self.XYjob.nonlin_fit: self.pageD['Non-Linear Fit'].EqnStr_Text.delete(1.0, END) self.pageD['Non-Linear Fit'].EqnStr_Text.insert( END, self.XYjob.nonlin_fit.rhs_eqnStr) # check for input file on command line if (XYjob_inp is None) and (len(sys.argv) == 2): fName = sys.argv[1] if not fName.endswith('.x_y'): fName += '.x_y' self.pathopen = os.path.abspath(fName) if os.path.isfile( self.pathopen ): # if file exists, read it as a definition file fInp = open(os.path.abspath(fName), 'rb') self.read_xyjob_from_file(fInp) else: # For erroneous file names, change status bar self.statusMessage.set("file:%s NOT FOUND" % fName) # Enter Data page to begin with #self.tab_frames.selectTab( self.tab_frames.buttonL[0] ) master.protocol('WM_DELETE_WINDOW', self.cleanupOnQuit) milliseconds = 100 self.master.after(milliseconds, self.littleInits) print(LICENSE)
class _Xygui(object): def cleanupOnQuit(self): if (not self.has_some_data()) or \ self.AskYesNo( title='Data Saved Before Quitting?', \ message='Do you want to exit XYmath?\n(Hit "Yes" ONLY IF your data is saved.)'): print('Doing final cleanup before quitting') self.allow_subWindows_to_close = 1 try: self.PlotWin.cleanupOnQuit() except: pass try: self.master.destroy() # called in PlotWin except: pass sys.exit(1) #def see_me(self): # '''Hoping to force focus back to main window.''' # print 'Hope to see you back at main.' # self.master.geometry( '%dx%d+%i+%i'%(self.master.winfo_width(),self.master.winfo_height(), # self.master.winfo_x(),self.master.winfo_y())) def __init__(self, master, XYjob_inp=None): self.initComplete = 0 #frame = Frame(master, width=753, height=536) #frame.pack() self.master = master self.allow_subWindows_to_close = 0 self.x, self.y, self.w, self.h = -1, -1, -1, -1 # bind master to <Configure> in order to handle any resizing, etc. # postpone self.master.bind("<Configure>", self.Master_Configure) self.master.bind('<Enter>', self.bindConfigure) self.master.title("XYmath") # make a Status Bar self.statusMessage = StringVar() self.statusMessage.set("") self.statusbar = Label(self.master, textvariable=self.statusMessage, bd=1, relief=SUNKEN) self.statusbar.pack(anchor=SW, fill=X, side=BOTTOM) self.statusMessage.set("Welcome to XYmath") self.menuBar = Menu(master, relief="raised", bd=2) top_File = Menu(self.menuBar, tearoff=0) top_File.add("command", label="New", command=self.menu_File_New) top_File.add("command", label="Open", command=self.menu_File_Open) top_File.add("command", label="Import", command=self.menu_File_Import) top_File.add("command", label="Save", command=self.menu_File_Save) top_File.add("command", label="Exit", command=self.menu_Program_Exit) self.menuBar.add("cascade", label="File", menu=top_File) self.menuBar.add("command", label="About", command=self.menu_About) self.tab_frames = TabFrames( self.master, height=460, width=650, tabPixelWidthL=[60, 90, 60, 60, 110, 110, 60, 90], labelL=[ 'Data', 'Simple Fit', 'Spline', 'Math', 'Exhaustive Fit', 'Non-Linear Fit', 'Plot', 'Code Gen' ]) self.tab_frames.pack(anchor=NW, fill=BOTH, side=TOP, expand=True) # Main window is finished, start building tab_frames pages self.pageD = {} # dictionary of tab_frames pages def setup_page(npage, PageObj): self.pageD[npage] = PageObj(self, self.tab_frames(npage)) self.pageD[str(self.tab_frames.labelL[npage])] = self.pageD[npage] self.tab_frames.setLeaveCallback( npage, self.pageD[npage].leavePageCallback) self.tab_frames.setSelectCallback( npage, self.pageD[npage].selectPageCallback) # setup pages setup_page(0, PageData) # setup page 0, Data page setup_page(1, SimplePage) # setup page 1, Simple Curve Fit setup_page(2, SplinePage) # setup page 2, Spline Curve Fit setup_page(3, MathPage) # setup page 3, Math Page setup_page(4, ExhaustPage) # setup page 4, Exhaustive Fit setup_page(5, NonLinFitPage) # setup page 5, Non-Linear Fit setup_page(6, PagePlot) # setup page 6, PagePlot setup_page(7, CodeGenPage) # setup page 7, Code Generation Page master.config(menu=self.menuBar) if XYjob_inp is None: self.XYjob = XY_Job() # XYjob may hold nonlinear fit object else: self.XYjob = XYjob_inp self.linear_fitL = [] # list of candidate linear fits self.selected_spline_objL = [] # list of candidate spline fits if self.XYjob.nonlin_fit: self.pageD['Non-Linear Fit'].EqnStr_Text.delete(1.0, END) self.pageD['Non-Linear Fit'].EqnStr_Text.insert( END, self.XYjob.nonlin_fit.rhs_eqnStr) # check for input file on command line if (XYjob_inp is None) and (len(sys.argv) == 2): fName = sys.argv[1] if not fName.endswith('.x_y'): fName += '.x_y' self.pathopen = os.path.abspath(fName) if os.path.isfile( self.pathopen ): # if file exists, read it as a definition file fInp = open(os.path.abspath(fName), 'rb') self.read_xyjob_from_file(fInp) else: # For erroneous file names, change status bar self.statusMessage.set("file:%s NOT FOUND" % fName) # Enter Data page to begin with #self.tab_frames.selectTab( self.tab_frames.buttonL[0] ) master.protocol('WM_DELETE_WINDOW', self.cleanupOnQuit) milliseconds = 100 self.master.after(milliseconds, self.littleInits) print(LICENSE) def littleInits(self): self.PlotWin = PlotWindow(self.master, self) self.tab_frames.selectTab(self.tab_frames.buttonL[0]) self.pageD[0].eg.focus_on(0, 0) # If transient, will minimize with main window AND be drawn on top #self.PlotWin.transient(self.master) def menu_Program_Exit(self): pass # >>>>>>insert any user code below this comment for section "menu_Program_Exit" # replace, delete, or comment-out the following self.statusMessage.set("called menu_Program_Exit") print("called menu_Program_Exit") self.cleanupOnQuit() def has_some_data(self): '''Return True if there is some data or curve fit being held in memory.''' print('Entering MathPage') XY = self.XYjob got_data = False if XY.nonlin_fit: print('Has a Non-Linear Fit') got_data = True for pagename in ['Simple Fit', 'Exhaustive Fit']: selected_linfitL = self.pageD[pagename].selected_linfitL for n, i in enumerate(selected_linfitL): print('Has a %s' % pagename) got_data = True for spline in self.selected_spline_objL: print('Has a Spline Fit') got_data = True DataPage = self.pageD['Data'] if DataPage.Xname_Entry_StringVar.get() != 'x': print('Has x Name') got_data = True if DataPage.Xunits_Entry_StringVar.get() != '': print('Has x Units') got_data = True if DataPage.Yname_Entry_StringVar.get() != 'y': print('Has y Name') got_data = True if DataPage.Yunits_Entry_StringVar.get() != '': print('Has Y Units') got_data = True if DataPage.eg.num_active_wtfactors: print('Has Weight Factors') got_data = True for i in range(DataPage.eg.Nrows): if DataPage.eg.entryL[i][0].is_float( ) or DataPage.eg.entryL[i][1].is_float(): print('Has Data in Entry Box') got_data = True if (not self.XYjob.dataset is None) or ( not self.XYjob.linfit is None) or ( not self.XYjob.nonlin_fit is None): print('Has Initialized XYjob') got_data = True return got_data def clear_all_data(self): self.XYjob = XY_Job() # XYjob may hold nonlinear fit object self.linear_fitL = [] # list of candidate linear fits self.selected_spline_objL = [] # list of candidate spline fits for pagename in ['Simple Fit', 'Exhaustive Fit']: self.pageD[pagename].selected_linfitL = [] self.pageD[pagename].Equations_Listbox.delete(0, END) self.pageD[pagename].Pcentstddev_Listbox.delete(0, END) self.pageD[pagename].Stddev_Listbox.delete(0, END) self.pageD['Data'].clear_all_data() self.pageD['Code Gen'].Listbox_1.delete(0, END) self.pageD['Math'].Listbox_1.delete(0, END) self.pageD['Spline'].Listbox_1.selection_clear(0, 5) # remove any constant entry widgets and pack_forget Improve Button self.pageD['Non-Linear Fit'].ImproveFit_Button.pack_forget() self.pageD['Non-Linear Fit'].SetConst_Button.pack_forget() for e in self.pageD['Non-Linear Fit'].constEntryWidgetL: e.pack_forget() del (e) for pagename in [ 'Data', 'Simple Fit', 'Spline', 'Math', 'Exhaustive Fit', 'Non-Linear Fit', 'Code Gen' ]: self.pageD[pagename].ShowHelp_Button_Click(None) self.pageD[pagename].pageFrame.update_idletasks() self.PlotWin.start_new_plot() #self.PlotWin.add_curve([1,2,3],[4,6,9], label='Sample Data', show_pts=1, show_line=1, # linewidth=2, markersize=20) #self.PlotWin.final_touches( title_str='Sample Plot', show_grid=True, show_legend=True) self.PlotWin.show_it() def menu_File_New(self): pass # >>>>>>insert any user code below this comment for section "menu_File_New" # replace, delete, or comment-out the following self.statusMessage.set("called menu_File_New") print("called menu_File_New") if self.has_some_data(): print('Has Some Data to be Cleared') if self.AskYesNo( title='Clear All Data', message='Do you want to clear all data from memory?'): self.clear_all_data() def menu_File_Open(self): pass # >>>>>>insert any user code below this comment for section "menu_File_Open" # replace, delete, or comment-out the following self.statusMessage.set("called menu_File_Open") print("called menu_File_Open") fInp = self.AskOpenFile(title='Open XYmath File', mode='rb', initialdir='.') if fInp: self.clear_all_data() self.read_xyjob_from_file(fInp) def read_xyjob_from_file(self, fInp): print('Opened file', os.path.basename(fInp.name)) # fInp will be closed by read_job_from_file self.XYjob.read_job_from_file(fileObj=fInp) #self.pageD['Data'].place_xyjob_data() prefix = os.path.basename(self.XYjob.file_prefix) self.master.title("XYmath - %s" % prefix) name = os.path.basename(self.XYjob.file_name) self.statusMessage.set("Read file:%s" % name) if hasattr(self, 'PlotWin'): self.pageD['Data'].place_xyjob_data() def menu_File_Save(self): pass # >>>>>>insert any user code below this comment for section "menu_File_Save" # replace, delete, or comment-out the following self.statusMessage.set("called menu_File_Save") print("called menu_File_Save") if self.XYjob.file_prefix: initialfile = self.XYjob.file_prefix + '.x_y' else: initialfile = '*.x_y' fsave = self.AskSaveasFilename(title='Save XYmath File', initialfile=initialfile) if fsave: if not fsave.lower().endswith('.x_y'): fsave += '.x_y' self.pageD['Data'].put_entry_values_on_plot() self.XYjob.write_job_to_file(fname=fsave) print('Saving XYmath to:', fsave) prefix = os.path.basename(self.XYjob.file_prefix) self.master.title("XYmath - %s" % prefix) name = os.path.basename(self.XYjob.file_name) self.statusMessage.set("Read file:%s" % name) def bindConfigure(self, event): if not self.initComplete: self.master.bind("<Configure>", self.Master_Configure) self.initComplete = 1 def Master_Configure(self, event): if event.widget != self.master: if self.w != -1: return x = int(self.master.winfo_x()) y = int(self.master.winfo_y()) w = int(self.master.winfo_width()) h = int(self.master.winfo_height()) if (self.x, self.y, self.w, self.h) == (-1, -1, -1, -1): self.x, self.y, self.w, self.h = x, y, w, h if self.w != w or self.h != h: print("Master reconfigured... make resize adjustments") self.w = w self.h = h #print ' ----------------- w,h=',w,h #self.tab_frames.lframe.configure(width=w, height=h) #self.tab_frames.frame.configure(width=w, height=h) #print 'winfo_reqwidth()=',self.tab_frames.winfo_reqwidth() #print 'winfo_reqheight()=',self.tab_frames.winfo_reqheight() #self.master.update_idletasks() # standard message dialogs... showinfo, showwarning, showerror def ShowInfo(self, title='Title', message='your message here.'): tkMessageBox.showinfo(title, message) return def ShowWarning(self, title='Title', message='your message here.'): tkMessageBox.showwarning(title, message) return def ShowError(self, title='Title', message='your message here.'): tkMessageBox.showerror(title, message) return # standard question dialogs... askquestion, askokcancel, askyesno, or askretrycancel # return True for OK, Yes, Retry, False for Cancel or No def AskYesNo(self, title='Title', message='your question here.'): return tkMessageBox.askyesno(title, message) def AskOK_Cancel(self, title='Title', message='your question here.'): return tkMessageBox.askokcancel(title, message) def AskRetryCancel(self, title='Title', message='your question here.'): return tkMessageBox.askretrycancel(title, message) # return "yes" for Yes, "no" for No def AskQuestion(self, title='Title', message='your question here.'): return tkMessageBox.askquestion(title, message) # standard file dialogs... askdirectory, askopenfile, asksaveasfilename # return a string containing directory name def AskDirectory(self, title='Choose Directory', initialdir="."): dirname = tkFileDialog.askdirectory(parent=self.master, initialdir=initialdir, title=title) return dirname # <-- string # return an OPEN file type object OR None (opened using mode, 'r','rb','w','wb') # WARNING... opening file with mode 'w' or 'wb' will erase contents def AskOpenFile(self, title='Open XYmath File', mode='rb', initialdir='.', filetypes=None): if filetypes is None: filetypes = [('XYmath File', '*.x_y'), ('Any File', '*.*')] fileobj = tkFileDialog.askopenfile(parent=self.master, mode=mode, title=title, initialdir=initialdir, filetypes=filetypes) # if opened, then fileobj.name contains the name string return fileobj # <-- an opened file, or the value None # return a string containing file name (the calling routine will need to open the file) def AskSaveasFilename(self, title='Save File', filetypes=None, initialfile=''): if filetypes is None: filetypes = [('XYmath File', '*.x_y'), ('Any File', '*.*')] fileName = tkFileDialog.asksaveasfilename(parent=self.master, filetypes=filetypes, initialfile=initialfile, title=title) return fileName # <-- string # alarm function is called after specified number of milliseconds def SetAlarm(self, milliseconds=1000): self.master.after(milliseconds, self.Alarm) def Alarm(self): pass # >>>>>>insert any user code below this comment for section "standard_alarm" print("Alarm called") def menu_File_Import(self): dialog = _Importxy(self.master, "Import X,Y Data") if dialog.result: wtArr = None print('place_entries_into_dataset with wtArr = None') xL = dialog.result["xL"] yL = dialog.result["yL"] XY = self.XYjob XY.define_dataset(array(xL, dtype=double), array(yL, dtype=double), wtArr=wtArr, xName=dialog.result["xName"], yName=dialog.result["yName"], xUnits='', yUnits='', timeStamp=time.time()) XY.dataset.sort_by_x() self.pageD['Data'].place_xyjob_data() def menu_About(self): dialog = _About(self.master, "About XYmath")
def setUp(self): unittest.TestCase.setUp(self) self.myclass = XY_Job()
cd_050 = 1/(1.0410141095741985 - 0.018737945262767248*gamma) # Rup=0.75, std=1.28366e-05 cd_075 = 1/(1.0211820293860214 - 0.006064881097850447*gamma) # Rup=1, std=1.01453e-05 cd_100 = 1/(1.0125848593169495 - 0.002058029259787154*gamma) # Rup=1.5, std=4.85485e-06 cd_150 = 1/(1.0059285328940355 - 0.00011367842090816805/gamma) # Rup=2, std=1.52664e-07 cd_200 = 0.9957021782441166 + 0.0006720167698767546/gamma """ gammaL = [1.1, 1.15, 1.2, 1.25, 1.3, 1.35, 1.4] cdD = {} # index=RWTU, value=CD cdD[0.5] = [0.9800142, 0.9809054, 0.981803, 0.9827062, 0.9836141, 0.9845261, 0.9854414] cdD[0.75] = [0.9857159, 0.9859911, 0.9862749, 0.9865668, 0.9868662, 0.9871727, 0.9874859] cdD[1] = [0.9897993, 0.989885, 0.989977, 0.9900752, 0.9901793, 0.990289, 0.990404] cdD[1.5] = [0.9942151, 0.9942037, 0.9941956, 0.9941907, 0.9941889, 0.99419, 0.9941941] cdD[2] = [0.9963129, 0.9962867, 0.9962624, 0.9962398, 0.996219, 0.9961998, 0.9961823] RupL = sorted( list( cdD.keys() ) ) for Rup in RupL: job = XY_Job() yL = cdD[Rup] job.define_dataset( gammaL, yL, xName='gamma', yName='Cd') ordered_resultL = job.fit_dataset_to_common_eqns( run_both=1, sort_by_pcent=1, max_terms=2) print('# Rup=%g, std=%g'%(Rup, job.linfit.std)) print( 'cd_%s = '%(str(int(100*Rup)).zfill(3),), job.linfit.get_eqn_str_w_numbs() )
He makes an initial guess of p1=1 and p2=0.2 and gets an answer of: p1 = 1.88184732 p2 = 0.70022901 With no initial guess, XYmath gets: p1 = 1.88185084847 p2 = 0.70022981688 1) Launch XYmath with code below 2) Go to "Non-Linear Fit" Tab - should see "p1*cos(p2*x) + p2*sin(p1*x)" in eqn box 3) Hit "Curve Fit" 4) See what happens when you hit "Improve Fit" a few times 5) Change to "Percent Error" and notice changes """ from xymath.xy_job import XY_Job from xymath.gui.xygui import main as run_gui XY = XY_Job() xdata = [-2, -1.64, -1.33, -0.7, 0, 0.45, 1.2, 1.64, 2.32, 2.9] ydata = [0.699369, 0.700462, 0.695354, 1.03905, 1.97389, 2.41143, 1.91091, 0.919576, -0.730975, -1.42001] XY.define_dataset(xdata, ydata, wtArr=None, xName="x", yName="y", xUnits="", yUnits="") XY.fit_dataset_to_nonlinear_eqn(run_best_pcent=0, rhs_eqnStr="p1*cos(p2*x) + p2*sin(p1*x)") run_gui(XY)
p1 = 1.88185084847 p2 = 0.70022981688 1) Launch XYmath with code below 2) Go to "Non-Linear Fit" Tab - should see "p1*cos(p2*x) + p2*sin(p1*x)" in eqn box 3) Hit "Curve Fit" 4) See what happens when you hit "Improve Fit" a few times 5) Change to "Percent Error" and notice changes """ from xymath.xy_job import XY_Job from xymath.gui.xygui import main as run_gui XY = XY_Job() xdata = [-2, -1.64, -1.33, -0.7, 0, 0.45, 1.2, 1.64, 2.32, 2.9] ydata = [ 0.699369, 0.700462, 0.695354, 1.03905, 1.97389, 2.41143, 1.91091, 0.919576, -0.730975, -1.42001 ] XY.define_dataset(xdata, ydata, wtArr=None, xName='x', yName='y', xUnits='', yUnits='')
def __init__(self, master, XYjob_inp=None): self.initComplete = 0 #frame = Frame(master, width=753, height=536) #frame.pack() self.master = master self.allow_subWindows_to_close = 0 self.x, self.y, self.w, self.h = -1,-1,-1,-1 # bind master to <Configure> in order to handle any resizing, etc. # postpone self.master.bind("<Configure>", self.Master_Configure) self.master.bind('<Enter>', self.bindConfigure) self.master.title("XYmath") # make a Status Bar self.statusMessage = StringVar() self.statusMessage.set("") self.statusbar = Label(self.master, textvariable=self.statusMessage, bd=1, relief=SUNKEN) self.statusbar.pack(anchor=SW, fill=X, side=BOTTOM) self.statusMessage.set("Welcome to XYmath") self.menuBar = Menu(master, relief = "raised", bd=2) top_File = Menu(self.menuBar, tearoff=0) top_File.add("command", label = "New", command = self.menu_File_New) top_File.add("command", label = "Open", command = self.menu_File_Open) top_File.add("command", label = "Import", command = self.menu_File_Import) top_File.add("command", label = "Save", command = self.menu_File_Save) top_File.add("command", label = "Exit", command = self.menu_Program_Exit) self.menuBar.add("cascade", label="File", menu=top_File) self.menuBar.add("command", label = "About", command = self.menu_About) self.tab_frames = TabFrames(self.master, height=460, width=650, tabPixelWidthL=[60,90, 60, 60, 110, 110, 60, 90], labelL=['Data','Simple Fit','Spline','Math','Exhaustive Fit','Non-Linear Fit','Plot','Code Gen']) self.tab_frames.pack(anchor=NW, fill=BOTH, side=TOP, expand=True) # Main window is finished, start building tab_frames pages self.pageD = {} # dictionary of tab_frames pages def setup_page( npage, PageObj ): self.pageD[npage] = PageObj(self, self.tab_frames(npage)) self.pageD[ str(self.tab_frames.labelL[npage]) ] = self.pageD[npage] self.tab_frames.setLeaveCallback(npage, self.pageD[npage].leavePageCallback) self.tab_frames.setSelectCallback(npage, self.pageD[npage].selectPageCallback) # setup pages setup_page(0, PageData) # setup page 0, Data page setup_page(1, SimplePage) # setup page 1, Simple Curve Fit setup_page(2, SplinePage) # setup page 2, Spline Curve Fit setup_page(3, MathPage) # setup page 3, Math Page setup_page(4, ExhaustPage) # setup page 4, Exhaustive Fit setup_page(5, NonLinFitPage) # setup page 5, Non-Linear Fit setup_page(6, PagePlot ) # setup page 6, PagePlot setup_page(7, CodeGenPage) # setup page 7, Code Generation Page master.config(menu=self.menuBar) if XYjob_inp is None: self.XYjob = XY_Job() # XYjob may hold nonlinear fit object else: self.XYjob = XYjob_inp self.linear_fitL = [] # list of candidate linear fits self.selected_spline_objL = [] # list of candidate spline fits if self.XYjob.nonlin_fit: self.pageD['Non-Linear Fit'].EqnStr_Text.delete(1.0, END) self.pageD['Non-Linear Fit'].EqnStr_Text.insert(END, self.XYjob.nonlin_fit.rhs_eqnStr) # check for input file on command line if (XYjob_inp is None) and (len( sys.argv ) == 2): fName = sys.argv[1] if not fName.endswith('.x_y'): fName += '.x_y' self.pathopen = os.path.abspath(fName) if os.path.isfile( self.pathopen ): # if file exists, read it as a definition file fInp = open( os.path.abspath(fName), 'rb' ) self.read_xyjob_from_file(fInp) else: # For erroneous file names, change status bar self.statusMessage.set("file:%s NOT FOUND"%fName) # Enter Data page to begin with #self.tab_frames.selectTab( self.tab_frames.buttonL[0] ) master.protocol('WM_DELETE_WINDOW', self.cleanupOnQuit) milliseconds=100 self.master.after( milliseconds, self.littleInits ) print(LICENSE)
class _Xygui(object): def cleanupOnQuit(self): if (not self.has_some_data()) or \ self.AskYesNo( title='Data Saved Before Quitting?', \ message='Do you want to exit XYmath?\n(Hit "Yes" ONLY IF your data is saved.)'): print('Doing final cleanup before quitting') self.allow_subWindows_to_close = 1 try: self.PlotWin.cleanupOnQuit() except: pass try: self.master.destroy() # called in PlotWin except: pass sys.exit(1) #def see_me(self): # '''Hoping to force focus back to main window.''' # print 'Hope to see you back at main.' # self.master.geometry( '%dx%d+%i+%i'%(self.master.winfo_width(),self.master.winfo_height(), # self.master.winfo_x(),self.master.winfo_y())) def __init__(self, master, XYjob_inp=None): self.initComplete = 0 #frame = Frame(master, width=753, height=536) #frame.pack() self.master = master self.allow_subWindows_to_close = 0 self.x, self.y, self.w, self.h = -1,-1,-1,-1 # bind master to <Configure> in order to handle any resizing, etc. # postpone self.master.bind("<Configure>", self.Master_Configure) self.master.bind('<Enter>', self.bindConfigure) self.master.title("XYmath") # make a Status Bar self.statusMessage = StringVar() self.statusMessage.set("") self.statusbar = Label(self.master, textvariable=self.statusMessage, bd=1, relief=SUNKEN) self.statusbar.pack(anchor=SW, fill=X, side=BOTTOM) self.statusMessage.set("Welcome to XYmath") self.menuBar = Menu(master, relief = "raised", bd=2) top_File = Menu(self.menuBar, tearoff=0) top_File.add("command", label = "New", command = self.menu_File_New) top_File.add("command", label = "Open", command = self.menu_File_Open) top_File.add("command", label = "Import", command = self.menu_File_Import) top_File.add("command", label = "Save", command = self.menu_File_Save) top_File.add("command", label = "Exit", command = self.menu_Program_Exit) self.menuBar.add("cascade", label="File", menu=top_File) self.menuBar.add("command", label = "About", command = self.menu_About) self.tab_frames = TabFrames(self.master, height=460, width=650, tabPixelWidthL=[60,90, 60, 60, 110, 110, 60, 90], labelL=['Data','Simple Fit','Spline','Math','Exhaustive Fit','Non-Linear Fit','Plot','Code Gen']) self.tab_frames.pack(anchor=NW, fill=BOTH, side=TOP, expand=True) # Main window is finished, start building tab_frames pages self.pageD = {} # dictionary of tab_frames pages def setup_page( npage, PageObj ): self.pageD[npage] = PageObj(self, self.tab_frames(npage)) self.pageD[ str(self.tab_frames.labelL[npage]) ] = self.pageD[npage] self.tab_frames.setLeaveCallback(npage, self.pageD[npage].leavePageCallback) self.tab_frames.setSelectCallback(npage, self.pageD[npage].selectPageCallback) # setup pages setup_page(0, PageData) # setup page 0, Data page setup_page(1, SimplePage) # setup page 1, Simple Curve Fit setup_page(2, SplinePage) # setup page 2, Spline Curve Fit setup_page(3, MathPage) # setup page 3, Math Page setup_page(4, ExhaustPage) # setup page 4, Exhaustive Fit setup_page(5, NonLinFitPage) # setup page 5, Non-Linear Fit setup_page(6, PagePlot ) # setup page 6, PagePlot setup_page(7, CodeGenPage) # setup page 7, Code Generation Page master.config(menu=self.menuBar) if XYjob_inp is None: self.XYjob = XY_Job() # XYjob may hold nonlinear fit object else: self.XYjob = XYjob_inp self.linear_fitL = [] # list of candidate linear fits self.selected_spline_objL = [] # list of candidate spline fits if self.XYjob.nonlin_fit: self.pageD['Non-Linear Fit'].EqnStr_Text.delete(1.0, END) self.pageD['Non-Linear Fit'].EqnStr_Text.insert(END, self.XYjob.nonlin_fit.rhs_eqnStr) # check for input file on command line if (XYjob_inp is None) and (len( sys.argv ) == 2): fName = sys.argv[1] if not fName.endswith('.x_y'): fName += '.x_y' self.pathopen = os.path.abspath(fName) if os.path.isfile( self.pathopen ): # if file exists, read it as a definition file fInp = open( os.path.abspath(fName), 'rb' ) self.read_xyjob_from_file(fInp) else: # For erroneous file names, change status bar self.statusMessage.set("file:%s NOT FOUND"%fName) # Enter Data page to begin with #self.tab_frames.selectTab( self.tab_frames.buttonL[0] ) master.protocol('WM_DELETE_WINDOW', self.cleanupOnQuit) milliseconds=100 self.master.after( milliseconds, self.littleInits ) print(LICENSE) def littleInits(self): self.PlotWin = PlotWindow(self.master, self) self.tab_frames.selectTab( self.tab_frames.buttonL[0] ) self.pageD[0].eg.focus_on(0,0) # If transient, will minimize with main window AND be drawn on top #self.PlotWin.transient(self.master) def menu_Program_Exit(self): pass # >>>>>>insert any user code below this comment for section "menu_Program_Exit" # replace, delete, or comment-out the following self.statusMessage.set("called menu_Program_Exit") print("called menu_Program_Exit") self.cleanupOnQuit() def has_some_data(self): '''Return True if there is some data or curve fit being held in memory.''' print('Entering MathPage') XY = self.XYjob got_data = False if XY.nonlin_fit: print('Has a Non-Linear Fit') got_data = True for pagename in ['Simple Fit','Exhaustive Fit']: selected_linfitL = self.pageD[pagename].selected_linfitL for n,i in enumerate(selected_linfitL): print('Has a %s'%pagename) got_data = True for spline in self.selected_spline_objL: print('Has a Spline Fit') got_data = True DataPage = self.pageD['Data'] if DataPage.Xname_Entry_StringVar.get() != 'x': print('Has x Name') got_data = True if DataPage.Xunits_Entry_StringVar.get() != '': print('Has x Units') got_data = True if DataPage.Yname_Entry_StringVar.get() != 'y': print('Has y Name') got_data = True if DataPage.Yunits_Entry_StringVar.get() != '': print('Has Y Units') got_data = True if DataPage.eg.num_active_wtfactors: print('Has Weight Factors') got_data = True for i in range(DataPage.eg.Nrows): if DataPage.eg.entryL[i][0].is_float() or DataPage.eg.entryL[i][1].is_float(): print('Has Data in Entry Box') got_data = True if (not self.XYjob.dataset is None) or (not self.XYjob.linfit is None) or (not self.XYjob.nonlin_fit is None): print('Has Initialized XYjob') got_data = True return got_data def clear_all_data(self): self.XYjob = XY_Job() # XYjob may hold nonlinear fit object self.linear_fitL = [] # list of candidate linear fits self.selected_spline_objL = [] # list of candidate spline fits for pagename in ['Simple Fit','Exhaustive Fit']: self.pageD[pagename].selected_linfitL = [] self.pageD[pagename].Equations_Listbox.delete(0, END) self.pageD[pagename].Pcentstddev_Listbox.delete(0, END) self.pageD[pagename].Stddev_Listbox.delete(0, END) self.pageD['Data'].clear_all_data() self.pageD['Code Gen'].Listbox_1.delete(0, END) self.pageD['Math'].Listbox_1.delete(0, END) self.pageD['Spline'].Listbox_1.selection_clear(0, 5) # remove any constant entry widgets and pack_forget Improve Button self.pageD['Non-Linear Fit'].ImproveFit_Button.pack_forget() self.pageD['Non-Linear Fit'].SetConst_Button.pack_forget() for e in self.pageD['Non-Linear Fit'].constEntryWidgetL: e.pack_forget() del(e) for pagename in ['Data','Simple Fit','Spline','Math','Exhaustive Fit','Non-Linear Fit','Code Gen']: self.pageD[pagename].ShowHelp_Button_Click(None) self.pageD[pagename].pageFrame.update_idletasks() self.PlotWin.start_new_plot() #self.PlotWin.add_curve([1,2,3],[4,6,9], label='Sample Data', show_pts=1, show_line=1, # linewidth=2, markersize=20) #self.PlotWin.final_touches( title_str='Sample Plot', show_grid=True, show_legend=True) self.PlotWin.show_it() def menu_File_New(self): pass # >>>>>>insert any user code below this comment for section "menu_File_New" # replace, delete, or comment-out the following self.statusMessage.set("called menu_File_New") print("called menu_File_New") if self.has_some_data(): print('Has Some Data to be Cleared') if self.AskYesNo( title='Clear All Data', message='Do you want to clear all data from memory?'): self.clear_all_data() def menu_File_Open(self): pass # >>>>>>insert any user code below this comment for section "menu_File_Open" # replace, delete, or comment-out the following self.statusMessage.set("called menu_File_Open") print("called menu_File_Open") fInp = self.AskOpenFile(title='Open XYmath File', mode='rb', initialdir='.') if fInp: self.clear_all_data() self.read_xyjob_from_file(fInp) def read_xyjob_from_file(self, fInp): print('Opened file', os.path.basename( fInp.name )) # fInp will be closed by read_job_from_file self.XYjob.read_job_from_file(fileObj=fInp) #self.pageD['Data'].place_xyjob_data() prefix = os.path.basename(self.XYjob.file_prefix) self.master.title("XYmath - %s"%prefix) name = os.path.basename(self.XYjob.file_name) self.statusMessage.set("Read file:%s"%name) if hasattr(self,'PlotWin'): self.pageD['Data'].place_xyjob_data() def menu_File_Save(self): pass # >>>>>>insert any user code below this comment for section "menu_File_Save" # replace, delete, or comment-out the following self.statusMessage.set("called menu_File_Save") print("called menu_File_Save") if self.XYjob.file_prefix: initialfile = self.XYjob.file_prefix + '.x_y' else: initialfile = '*.x_y' fsave = self.AskSaveasFilename(title='Save XYmath File', initialfile=initialfile) if fsave: if not fsave.lower().endswith('.x_y'): fsave += '.x_y' self.pageD['Data'].put_entry_values_on_plot() self.XYjob.write_job_to_file( fname=fsave ) print('Saving XYmath to:',fsave) prefix = os.path.basename(self.XYjob.file_prefix) self.master.title("XYmath - %s"%prefix) name = os.path.basename(self.XYjob.file_name) self.statusMessage.set("Read file:%s"%name) def bindConfigure(self, event): if not self.initComplete: self.master.bind("<Configure>", self.Master_Configure) self.initComplete = 1 def Master_Configure(self, event): if event.widget != self.master: if self.w != -1: return x = int(self.master.winfo_x()) y = int(self.master.winfo_y()) w = int(self.master.winfo_width()) h = int(self.master.winfo_height()) if (self.x, self.y, self.w, self.h) == (-1,-1,-1,-1): self.x, self.y, self.w, self.h = x,y,w,h if self.w!=w or self.h!=h: print("Master reconfigured... make resize adjustments") self.w=w self.h=h #print ' ----------------- w,h=',w,h #self.tab_frames.lframe.configure(width=w, height=h) #self.tab_frames.frame.configure(width=w, height=h) #print 'winfo_reqwidth()=',self.tab_frames.winfo_reqwidth() #print 'winfo_reqheight()=',self.tab_frames.winfo_reqheight() #self.master.update_idletasks() # standard message dialogs... showinfo, showwarning, showerror def ShowInfo(self, title='Title', message='your message here.'): tkMessageBox.showinfo( title, message ) return def ShowWarning(self, title='Title', message='your message here.'): tkMessageBox.showwarning( title, message ) return def ShowError(self, title='Title', message='your message here.'): tkMessageBox.showerror( title, message ) return # standard question dialogs... askquestion, askokcancel, askyesno, or askretrycancel # return True for OK, Yes, Retry, False for Cancel or No def AskYesNo(self, title='Title', message='your question here.'): return tkMessageBox.askyesno( title, message ) def AskOK_Cancel(self, title='Title', message='your question here.'): return tkMessageBox.askokcancel( title, message ) def AskRetryCancel(self, title='Title', message='your question here.'): return tkMessageBox.askretrycancel( title, message ) # return "yes" for Yes, "no" for No def AskQuestion(self, title='Title', message='your question here.'): return tkMessageBox.askquestion( title, message ) # standard file dialogs... askdirectory, askopenfile, asksaveasfilename # return a string containing directory name def AskDirectory(self, title='Choose Directory', initialdir="."): dirname = tkFileDialog.askdirectory(parent=self.master,initialdir=initialdir,title=title) return dirname # <-- string # return an OPEN file type object OR None (opened using mode, 'r','rb','w','wb') # WARNING... opening file with mode 'w' or 'wb' will erase contents def AskOpenFile(self, title='Open XYmath File', mode='rb', initialdir='.', filetypes=None): if filetypes is None: filetypes = [ ('XYmath File','*.x_y'), ('Any File','*.*')] fileobj = tkFileDialog.askopenfile(parent=self.master,mode=mode,title=title, initialdir=initialdir, filetypes=filetypes) # if opened, then fileobj.name contains the name string return fileobj # <-- an opened file, or the value None # return a string containing file name (the calling routine will need to open the file) def AskSaveasFilename(self, title='Save File', filetypes=None, initialfile=''): if filetypes is None: filetypes = [ ('XYmath File','*.x_y'), ('Any File','*.*')] fileName = tkFileDialog.asksaveasfilename(parent=self.master,filetypes=filetypes, initialfile=initialfile ,title=title) return fileName # <-- string # alarm function is called after specified number of milliseconds def SetAlarm(self, milliseconds=1000): self.master.after( milliseconds, self.Alarm ) def Alarm(self): pass # >>>>>>insert any user code below this comment for section "standard_alarm" print("Alarm called") def menu_File_Import(self): dialog = _Importxy(self.master, "Import X,Y Data") if dialog.result: wtArr = None print('place_entries_into_dataset with wtArr = None') xL = dialog.result["xL"] yL = dialog.result["yL"] XY = self.XYjob XY.define_dataset( array(xL, dtype=double), array(yL, dtype=double), wtArr=wtArr, xName=dialog.result["xName"], yName=dialog.result["yName"], xUnits='', yUnits='', timeStamp=time.time()) XY.dataset.sort_by_x() self.pageD['Data'].place_xyjob_data() def menu_About(self): dialog = _About(self.master, "About XYmath")
A = 101124.977819 c = 1.00041249485 d = 2.23356723474e-05 n = 5.31856523127 x = altitude (m) y = Pressure (Pa) Correlation Coefficient = 0.999996135864 Standard Deviation = 88.761441745 Percent Standard Deviation = 0.094401748723% """ from numpy import array, double from xymath.xy_job import XY_Job from xymath.gui.xygui import main as run_gui XY = XY_Job() alt_mArr = array([-1524,-1372,-1219,-1067,-914,-762,-610,-457,-305,-152,0,152, 305,457,610,762,914,1067,1219,1372,1524,1829,2134,2438,2743,3048,4572, 6096,7620,9144,10668,12192,13716,15240], dtype=double) PaArr = 1000.0 * array([121,119,117,115,113,111,109,107,105,103,101,99.5,97.7,96, 94.2,92.5,90.8,89.1,87.5,85.9,84.3,81.2,78.2,75.3,72.4,69.7,57.2,46.6,37.6, 30.1,23.8,18.7,14.5,11.1], dtype=double) XY.define_dataset(alt_mArr, PaArr, wtArr=None, xName='altitude', yName='Pressure', xUnits='m', yUnits='Pa') guessD = {'A':100000, 'c':1, 'd':0.00001, 'n':4 }
- Surprisingly, XYmath shows the 3 term equation "y = c0 + c1*x + c2/x" to be superior to the 4 term equations as well as the quadratic. """ from numpy import array from xymath.dataset import DataSet from xymath.linfit import LinCurveFit from xymath.xy_job import XY_Job from xymath.gui.xygui import main as run_gui concL = [0.1, 0.2, 0.3, 0.4, 0.5, 0.6, 0.7, 0.8, 0.9, 1] readingL = [1.54, 2.03, 3.17, 3.67, 4.89, 6.73, 6.74, 7.87, 8.86, 10.35] DS = DataSet(concL, readingL, xName='Concentration', yName='Instrument Reading') print('\n\n') print('=' * 55) XY = XY_Job() XY.define_dataset(concL, readingL, wtArr=None, xName='Concentration', yName='Instrument Reading', xUnits='', yUnits='') run_gui(XY)