def _parse_parameter_file(self):
super(MaestroDataset, self)._parse_parameter_file()
jobinfo_filename = os.path.join(self.output_dir, "job_info")
line = ""
with open(jobinfo_filename, "r") as f:
while not line.startswith(" [*] indicates overridden default"):
# get the code git hashes
if "git hash" in line:
# line format: codename git hash: the-hash
fields = line.split(":")
self.parameters[fields[0]] = fields[1].strip()
line = next(f)
# get the runtime parameters
for line in f:
p, v = (_.strip() for _ in line[4:].split("=", 1))
if len(v) == 0:
self.parameters[p] = ""
else:
self.parameters[p] = _guess_pcast(v)
# hydro method is set by the base class -- override it here
self.parameters["HydroMethod"] = "Maestro"
# set the periodicity based on the integer BC runtime parameters
periodicity = [True, True, True]
if not self.parameters['bcx_lo'] == -1:
periodicity[0] = False
if not self.parameters['bcy_lo'] == -1:
periodicity[1] = False
if not self.parameters['bcz_lo'] == -1:
periodicity[2] = False
self.periodicity = ensure_tuple(periodicity)
def _parse_parameter_file(self):
xmin, xmax = self._handle.attrs["RootGridX1"][:2]
ymin, ymax = self._handle.attrs["RootGridX2"][:2]
zmin, zmax = self._handle.attrs["RootGridX3"][:2]
self.domain_left_edge = np.array([xmin, ymin, zmin], dtype="float64")
self.domain_right_edge = np.array([xmax, ymax, zmax], dtype="float64")
self.geometry = geom_map[self._handle.attrs["Coordinates"].decode(
"utf-8")]
self.domain_width = self.domain_right_edge - self.domain_left_edge
self.domain_dimensions = self._handle.attrs["RootGridSize"]
self._field_map = {}
k = 0
for dname, num_var in zip(self._handle.attrs["DatasetNames"],
self._handle.attrs["NumVariables"]):
for j in range(num_var):
fname = self._handle.attrs["VariableNames"][k].decode(
"ascii", "ignore")
self._field_map[fname] = (dname.decode("ascii", "ignore"), j)
k += 1
self.refine_by = 2
dimensionality = 3
if self.domain_dimensions[2] == 1:
dimensionality = 2
if self.domain_dimensions[1] == 1:
dimensionality = 1
self.dimensionality = dimensionality
self.current_time = self._handle.attrs["Time"]
self.unique_identifier = self.parameter_filename.__hash__()
self.cosmological_simulation = False
self.num_ghost_zones = 0
self.field_ordering = "fortran"
self.boundary_conditions = [1] * 6
if "periodicity" in self.specified_parameters:
self.periodicity = ensure_tuple(
self.specified_parameters["periodicity"])
else:
self.periodicity = (True, True, True)
if "gamma" in self.specified_parameters:
self.gamma = float(self.specified_parameters["gamma"])
else:
self.gamma = 5.0 / 3.0
self.current_redshift = (self.omega_lambda) = (
self.omega_matter
) = self.hubble_constant = self.cosmological_simulation = 0.0
self.parameters[
"Time"] = self.current_time # Hardcode time conversion for now.
self.parameters[
"HydroMethod"] = 0 # Hardcode for now until field staggering is supported.
if "gamma" in self.specified_parameters:
self.parameters["Gamma"] = self.specified_parameters["gamma"]
else:
self.parameters["Gamma"] = 5.0 / 3.0
self.mu = self.specified_parameters.get("mu", default_mu)
def _setup1d(self):
# self._index_class = BoxlibHierarchy1D
# self._fieldinfo_fallback = Orion1DFieldInfo
self.domain_left_edge = \
np.concatenate([self.domain_left_edge, [0.0, 0.0]])
self.domain_right_edge = \
np.concatenate([self.domain_right_edge, [1.0, 1.0]])
tmp = self.domain_dimensions.tolist()
tmp.extend((1, 1))
self.domain_dimensions = np.array(tmp)
tmp = list(self.periodicity)
tmp[1] = False
tmp[2] = False
self.periodicity = ensure_tuple(tmp)
def _setup2d(self):
self.domain_left_edge = \
np.concatenate([self.domain_left_edge, [0.0]])
self.domain_right_edge = \
np.concatenate([self.domain_right_edge, [1.0]])
if self.geometry == "cylindrical":
dre = self.domain_right_edge
dre[2] = 2.0 * np.pi
self.domain_right_edge = dre
tmp = self.domain_dimensions.tolist()
tmp.append(1)
self.domain_dimensions = np.array(tmp)
tmp = list(self.periodicity)
tmp[2] = False
self.periodicity = ensure_tuple(tmp)
def _parse_parameter_file(self):
self._handle = h5py.File(self.parameter_filename, mode="r")
if "data_software" in self._handle["gridded_data_format"].attrs:
self.data_software = self._handle["gridded_data_format"].attrs[
"data_software"]
else:
self.data_software = "unknown"
sp = self._handle["/simulation_parameters"].attrs
if self.geometry is None:
geometry = just_one(sp.get("geometry", 0))
try:
self.geometry = GEOMETRY_TRANS[geometry]
except KeyError:
raise YTGDFUnknownGeometry(geometry)
self.parameters.update(sp)
self.domain_left_edge = sp["domain_left_edge"][:]
self.domain_right_edge = sp["domain_right_edge"][:]
self.domain_dimensions = sp["domain_dimensions"][:]
refine_by = sp["refine_by"]
if refine_by is None:
refine_by = 2
self.refine_by = refine_by
self.dimensionality = sp["dimensionality"]
self.current_time = sp["current_time"]
self.unique_identifier = sp["unique_identifier"]
self.cosmological_simulation = sp["cosmological_simulation"]
if sp["num_ghost_zones"] != 0:
raise RuntimeError
self.num_ghost_zones = sp["num_ghost_zones"]
self.field_ordering = sp["field_ordering"]
self.boundary_conditions = sp["boundary_conditions"][:]
p = [bnd == 0 for bnd in self.boundary_conditions[::2]]
self.periodicity = ensure_tuple(p)
if self.cosmological_simulation:
self.current_redshift = sp["current_redshift"]
self.omega_lambda = sp["omega_lambda"]
self.omega_matter = sp["omega_matter"]
self.hubble_constant = sp["hubble_constant"]
else:
self.current_redshift = (self.omega_lambda) = (
self.omega_matter
) = self.hubble_constant = self.cosmological_simulation = 0.0
self.parameters["Time"] = 1.0 # Hardcode time conversion for now.
# Hardcode for now until field staggering is supported.
self.parameters["HydroMethod"] = 0
self._handle.close()
del self._handle
def nested_dict_get(pdict, keys, default=None):
"""
Retrieve a value from a nested dict using a tuple of keys.
If a is a dict, and a['b'] = {'c': 'd'},
then nested_dict_get(a, ('b', 'c')) returns 'd'.
"""
keys = ensure_tuple(keys)
val = pdict
for key in keys:
if val is None:
break
val = val.get(key)
if val is None:
val = default
return val
def _parse_parameter_file(self):
self._handle = h5py.File(self.parameter_filename, "r")
if 'data_software' in self._handle['gridded_data_format'].attrs:
self.data_software = \
self._handle['gridded_data_format'].attrs['data_software']
else:
self.data_software = "unknown"
sp = self._handle["/simulation_parameters"].attrs
if self.geometry is None:
geometry = just_one(sp.get("geometry", 0))
try:
self.geometry = GEOMETRY_TRANS[geometry]
except KeyError:
raise YTGDFUnknownGeometry(geometry)
self.parameters.update(sp)
self.domain_left_edge = sp["domain_left_edge"][:]
self.domain_right_edge = sp["domain_right_edge"][:]
self.domain_dimensions = sp["domain_dimensions"][:]
refine_by = sp["refine_by"]
if refine_by is None:
refine_by = 2
self.refine_by = refine_by
self.dimensionality = sp["dimensionality"]
self.current_time = sp["current_time"]
self.unique_identifier = sp["unique_identifier"]
self.cosmological_simulation = sp["cosmological_simulation"]
if sp["num_ghost_zones"] != 0:
raise RuntimeError
self.num_ghost_zones = sp["num_ghost_zones"]
self.field_ordering = sp["field_ordering"]
self.boundary_conditions = sp["boundary_conditions"][:]
p = [bnd == 0 for bnd in self.boundary_conditions[::2]]
self.periodicity = ensure_tuple(p)
if self.cosmological_simulation:
self.current_redshift = sp["current_redshift"]
self.omega_lambda = sp["omega_lambda"]
self.omega_matter = sp["omega_matter"]
self.hubble_constant = sp["hubble_constant"]
else:
self.current_redshift = self.omega_lambda = self.omega_matter = \
self.hubble_constant = self.cosmological_simulation = 0.0
self.parameters['Time'] = 1.0 # Hardcode time conversion for now.
# Hardcode for now until field staggering is supported.
self.parameters["HydroMethod"] = 0
self._handle.close()
del self._handle
def _parse_cparams(self):
if self.cparam_filename is None:
return
for line in (line.split("#")[0].strip()
for line in open(self.cparam_filename)):
if "=" not in line: continue
if len(line) == 0: continue
param, vals = [s.strip() for s in line.split("=")]
if param == "amr.n_cell":
vals = self.domain_dimensions = np.array(vals.split(),
dtype='int32')
# For 1D and 2D simulations in BoxLib usually only the relevant dimensions
# have a specified number of zones, but yt requires domain_dimensions to
# have three elements, with 1 in the additional slots if we're not in 3D,
# so append them as necessary.
if (len(vals) == 1):
vals = self.domain_dimensions = np.array([vals[0], 1, 1])
elif (len(vals) == 2):
vals = self.domain_dimensions = np.array(
[vals[0], vals[1], 1])
elif param == "amr.ref_ratio":
vals = self.refine_by = int(vals[0])
elif param == "Prob.lo_bc":
vals = self.periodicity = ensure_tuple(
[i == 0 for i in vals.split()])
elif param == "castro.use_comoving":
vals = self.cosmological_simulation = int(vals)
else:
vals = _guess_pcast(vals)
self.parameters[param] = vals
if getattr(self, "cosmological_simulation", 0) == 1:
self.omega_lambda = self.parameters["comoving_OmL"]
self.omega_matter = self.parameters["comoving_OmM"]
self.hubble_constant = self.parameters["comoving_h"]
a_file = open(os.path.join(self.output_dir, 'comoving_a'))
line = a_file.readline().strip()
a_file.close()
self.current_redshift = 1 / float(line) - 1
else:
self.current_redshift = self.omega_lambda = self.omega_matter = \
self.hubble_constant = self.cosmological_simulation = 0.0
def _parse_parameter_file(self):
enzo = self._obtain_enzo()
self.basename = "cycle%08i" % (
enzo.yt_parameter_file["NumberOfPythonCalls"])
self.parameters["CurrentTimeIdentifier"] = time.time()
self.parameters.update(enzo.yt_parameter_file)
self.conversion_factors.update(enzo.conversion_factors)
for i in self.parameters:
if isinstance(self.parameters[i], tuple):
self.parameters[i] = np.array(self.parameters[i])
if i.endswith("Units") and not i.startswith("Temperature"):
dataType = i[:-5]
self.conversion_factors[dataType] = self.parameters[i]
self.domain_left_edge = self.parameters["DomainLeftEdge"].copy()
self.domain_right_edge = self.parameters["DomainRightEdge"].copy()
for i in self.conversion_factors:
if isinstance(self.conversion_factors[i], tuple):
self.conversion_factors[i] = np.array(
self.conversion_factors[i])
for p, v in self._parameter_override.items():
self.parameters[p] = v
for p, v in self._conversion_override.items():
self.conversion_factors[p] = v
self.refine_by = self.parameters["RefineBy"]
self.periodicity = ensure_tuple(
self.parameters["LeftFaceBoundaryCondition"] == 3)
self.dimensionality = self.parameters["TopGridRank"]
self.domain_dimensions = self.parameters["TopGridDimensions"]
self.current_time = self.parameters["InitialTime"]
if "CurrentTimeIdentifier" in self.parameters:
self.unique_identifier = self.parameters["CurrentTimeIdentifier"]
if self.parameters["ComovingCoordinates"]:
self.cosmological_simulation = 1
self.current_redshift = self.parameters["CosmologyCurrentRedshift"]
self.omega_lambda = self.parameters["CosmologyOmegaLambdaNow"]
self.omega_matter = self.parameters["CosmologyOmegaMatterNow"]
self.hubble_constant = self.parameters[
"CosmologyHubbleConstantNow"]
else:
self.current_redshift = (self.omega_lambda) = (
self.omega_matter
) = self.hubble_constant = self.cosmological_simulation = 0.0
def _parse_parameter_file(self):
"""
Parses the parameter file and establishes the various
dictionaries.
"""
f = open(self.parameter_filename, "r")
# get dimension from first block name
b0, fn0 = f.readline().strip().split()
level0, left0, right0 = get_block_info(b0, min_dim=0)
root_blocks = get_root_blocks(b0)
f.close()
self.dimensionality = left0.size
self.periodicity = \
ensure_tuple(np.ones(self.dimensionality, dtype=bool))
fh = h5py.File(os.path.join(self.directory, fn0), "r")
self.domain_left_edge = fh.attrs["lower"]
self.domain_right_edge = fh.attrs["upper"]
# all blocks are the same size
ablock = fh[list(fh.keys())[0]]
self.current_time = ablock.attrs["time"][0]
gsi = ablock.attrs["enzo_GridStartIndex"]
gei = ablock.attrs["enzo_GridEndIndex"]
self.ghost_zones = gsi[0]
self.root_block_dimensions = root_blocks
self.active_grid_dimensions = gei - gsi + 1
self.grid_dimensions = ablock.attrs["enzo_GridDimension"]
self.domain_dimensions = root_blocks * self.active_grid_dimensions
fh.close()
self.periodicity += (False, ) * (3 - self.dimensionality)
# WIP hard-coded for now
self.refine_by = 2
self.cosmological_simulation = 0
self.gamma = 5. / 3.
self.particle_types = ()
self.particle_types_raw = self.particle_types
self.unique_identifier = \
str(int(os.stat(self.parameter_filename)[stat.ST_CTIME]))
def _parse_parameter_file(self):
super(CastroDataset, self)._parse_parameter_file()
jobinfo_filename = os.path.join(self.output_dir, "job_info")
line = ""
with open(jobinfo_filename, "r") as f:
while not line.startswith(" Inputs File Parameters"):
# boundary condition info starts with -x:, etc.
bcs = ["-x:", "+x:", "-y:", "+y:", "-z:", "+z:"]
if any(b in line for b in bcs):
p, v = line.strip().split(":")
self.parameters[p] = v.strip()
if "git hash" in line:
# line format: codename git hash: the-hash
fields = line.split(":")
self.parameters[fields[0]] = fields[1].strip()
line = next(f)
# runtime parameters that we overrode follow "Inputs File
# Parameters"
# skip the "====..." line
line = next(f)
for line in f:
p, v = line.strip().split("=")
self.parameters[p] = v.strip()
# hydro method is set by the base class -- override it here
self.parameters["HydroMethod"] = "Castro"
# set the periodicity based on the runtime parameters
periodicity = [True, True, True]
if not self.parameters['-x'] == "interior": periodicity[0] = False
if self.dimensionality >= 2:
if not self.parameters['-y'] == "interior": periodicity[1] = False
if self.dimensionality == 3:
if not self.parameters['-z'] == "interior": periodicity[2] = False
self.periodicity = ensure_tuple(periodicity)
def _parse_parameter_file(self):
"""
Parses the parameter file and establishes the various
dictionaries.
"""
f = open(self.parameter_filename, "r")
# get dimension from first block name
b0, fn0 = f.readline().strip().split()
level0, left0, right0 = get_block_info(b0, min_dim=0)
root_blocks = get_root_blocks(b0)
f.close()
self.dimensionality = left0.size
self.periodicity = \
ensure_tuple(np.ones(self.dimensionality, dtype=bool))
lcfn = self.parameter_filename[:-len(self._suffix)] + ".libconfig"
if os.path.exists(lcfn):
with io.open(lcfn, "r") as lf:
self.parameters = libconf.load(lf)
cosmo = nested_dict_get(
self.parameters, ("Physics", "cosmology"))
if cosmo is not None:
self.cosmological_simulation = 1
co_pars = ["hubble_constant_now", "omega_matter_now",
"omega_lambda_now", "comoving_box_size",
"initial_redshift"]
co_dict = \
dict((attr, nested_dict_get(self.parameters,
("Physics", "cosmology", attr))) for attr in co_pars)
for attr in ["hubble_constant",
"omega_matter",
"omega_lambda"]:
setattr(self, attr, co_dict["%s_now" % attr])
# Current redshift is not stored, so it's not possible
# to set all cosmological units yet.
# Get the time units and use that to figure out redshift.
k = cosmology_get_units(
self.hubble_constant, self.omega_matter,
co_dict["comoving_box_size"],
co_dict["initial_redshift"], 0)
setdefaultattr(
self, 'time_unit', self.quan(k['utim'], 's'))
co = Cosmology(hubble_constant=self.hubble_constant,
omega_matter=self.omega_matter,
omega_lambda=self.omega_lambda)
else:
self.cosmological_simulation = 0
else:
self.cosmological_simulation = 0
fh = h5py.File(os.path.join(self.directory, fn0), "r")
self.domain_left_edge = fh.attrs["lower"]
self.domain_right_edge = fh.attrs["upper"]
# all blocks are the same size
ablock = fh[list(fh.keys())[0]]
self.current_time = ablock.attrs["time"][0]
gsi = ablock.attrs["enzo_GridStartIndex"]
gei = ablock.attrs["enzo_GridEndIndex"]
self.ghost_zones = gsi[0]
self.root_block_dimensions = root_blocks
self.active_grid_dimensions = gei - gsi + 1
self.grid_dimensions = ablock.attrs["enzo_GridDimension"]
self.domain_dimensions = root_blocks * self.active_grid_dimensions
fh.close()
if self.cosmological_simulation:
self.current_redshift = \
co.z_from_t(self.current_time * self.time_unit)
self.periodicity += (False, ) * (3 - self.dimensionality)
self.gamma = nested_dict_get(self.parameters, ("Field", "gamma"))
self.unique_identifier = \
str(int(os.stat(self.parameter_filename)[stat.ST_CTIME]))
def _parse_parameter_file(self):
self._handle = open(self.parameter_filename, "rb")
# Read the start of a grid to get simulation parameters.
grid = {}
grid['read_field'] = None
line = self._handle.readline()
while grid['read_field'] is None:
parse_line(line, grid)
splitup = line.strip().split()
if chk23('X_COORDINATES') in splitup:
grid['left_edge'] = np.zeros(3)
grid['dds'] = np.zeros(3)
v = np.fromfile(self._handle, dtype='>f8', count=2)
grid['left_edge'][0] = v[0] - 0.5 * (v[1] - v[0])
grid['dds'][0] = v[1] - v[0]
if chk23('Y_COORDINATES') in splitup:
v = np.fromfile(self._handle, dtype='>f8', count=2)
grid['left_edge'][1] = v[0] - 0.5 * (v[1] - v[0])
grid['dds'][1] = v[1] - v[0]
if chk23('Z_COORDINATES') in splitup:
v = np.fromfile(self._handle, dtype='>f8', count=2)
grid['left_edge'][2] = v[0] - 0.5 * (v[1] - v[0])
grid['dds'][2] = v[1] - v[0]
if check_break(line): break
line = self._handle.readline()
self.domain_left_edge = grid['left_edge']
mylog.info(
"Temporarily setting domain_right_edge = -domain_left_edge." +
" This will be corrected automatically if it is not the case.")
self.domain_right_edge = -self.domain_left_edge
self.domain_width = self.domain_right_edge - self.domain_left_edge
self.domain_dimensions = np.round(self.domain_width /
grid['dds']).astype('int32')
refine_by = None
if refine_by is None: refine_by = 2
self.refine_by = refine_by
dimensionality = 3
if grid['dimensions'][2] == 1:
dimensionality = 2
if grid['dimensions'][1] == 1:
dimensionality = 1
if dimensionality <= 2: self.domain_dimensions[2] = np.int32(1)
if dimensionality == 1: self.domain_dimensions[1] = np.int32(1)
if dimensionality != 3 and self.nprocs > 1:
raise RuntimeError(
"Virtual grids are only supported for 3D outputs!")
self.dimensionality = dimensionality
self.current_time = grid["time"]
self.unique_identifier = self.parameter_filename.__hash__()
self.cosmological_simulation = False
self.num_ghost_zones = 0
self.field_ordering = 'fortran'
self.boundary_conditions = [1] * 6
if 'periodicity' in self.specified_parameters:
self.periodicity = ensure_tuple(
self.specified_parameters['periodicity'])
else:
self.periodicity = (
True,
True,
True,
)
if 'gamma' in self.specified_parameters:
self.gamma = float(self.specified_parameters['gamma'])
else:
self.gamma = 5. / 3.
dataset_dir = os.path.dirname(self.parameter_filename)
dname = os.path.split(self.parameter_filename)[-1]
if dataset_dir.endswith("id0"):
dname = "id0/" + dname
dataset_dir = dataset_dir[:-3]
gridlistread = glob.glob(
os.path.join(dataset_dir,
'id*/%s-id*%s' % (dname[4:-9], dname[-9:])))
if 'id0' in dname:
gridlistread += glob.glob(
os.path.join(dataset_dir, 'id*/lev*/%s*-lev*%s' %
(dname[4:-9], dname[-9:])))
else:
gridlistread += glob.glob(
os.path.join(dataset_dir,
'lev*/%s*-lev*%s' % (dname[:-9], dname[-9:])))
ndots = dname.count(".")
gridlistread = [
fn for fn in gridlistread
if os.path.basename(fn).count(".") == ndots
]
self.nvtk = len(gridlistread) + 1
self.current_redshift = self.omega_lambda = self.omega_matter = \
self.hubble_constant = self.cosmological_simulation = 0.0
self.parameters[
'Time'] = self.current_time # Hardcode time conversion for now.
self.parameters[
"HydroMethod"] = 0 # Hardcode for now until field staggering is supported.
if "gamma" in self.specified_parameters:
self.parameters["Gamma"] = self.specified_parameters["gamma"]
else:
self.parameters["Gamma"] = 5. / 3.
self.geometry = self.specified_parameters.get("geometry", "cartesian")
self._handle.close()
def _parse_enzo2_parameter_file(self, f):
for line in (l.strip() for l in f):
if len(line) < 2: continue
param, vals = (i.strip() for i in line.split("=", 1))
# First we try to decipher what type of value it is.
vals = vals.split()
# Special case approaching.
if "(do" in vals: vals = vals[:1]
if len(vals) == 0:
pcast = str # Assume NULL output
else:
v = vals[0]
# Figure out if it's castable to floating point:
try:
float(v)
except ValueError:
pcast = str
else:
if any("." in v or "e+" in v or "e-" in v for v in vals):
pcast = float
elif v == "inf":
pcast = str
else:
pcast = int
# Now we figure out what to do with it.
if len(vals) == 0:
vals = ""
elif len(vals) == 1:
vals = pcast(vals[0])
else:
vals = np.array([pcast(i) for i in vals if i != "-99999"])
if param.startswith("Append"):
if param not in self.parameters:
self.parameters[param] = []
self.parameters[param].append(vals)
else:
self.parameters[param] = vals
self.refine_by = self.parameters["RefineBy"]
self.periodicity = ensure_tuple(
self.parameters["LeftFaceBoundaryCondition"] == 3)
self.dimensionality = self.parameters["TopGridRank"]
if "MetaDataDatasetUUID" in self.parameters:
self.unique_identifier = self.parameters["MetaDataDatasetUUID"]
elif "CurrentTimeIdentifier" in self.parameters:
self.unique_identifier = self.parameters["CurrentTimeIdentifier"]
else:
self.unique_identifier = \
str(int(os.stat(self.parameter_filename)[stat.ST_CTIME]))
if self.dimensionality > 1:
self.domain_dimensions = self.parameters["TopGridDimensions"]
if len(self.domain_dimensions) < 3:
tmp = self.domain_dimensions.tolist()
tmp.append(1)
self.domain_dimensions = np.array(tmp)
self.periodicity += (False, )
self.domain_left_edge = np.array(self.parameters["DomainLeftEdge"],
"float64").copy()
self.domain_right_edge = np.array(
self.parameters["DomainRightEdge"], "float64").copy()
else:
self.domain_left_edge = np.array(self.parameters["DomainLeftEdge"],
"float64")
self.domain_right_edge = np.array(
self.parameters["DomainRightEdge"], "float64")
self.domain_dimensions = np.array(
[self.parameters["TopGridDimensions"], 1, 1])
self.periodicity += (False, False)
self.gamma = self.parameters["Gamma"]
if self.parameters["ComovingCoordinates"]:
self.cosmological_simulation = 1
self.current_redshift = self.parameters["CosmologyCurrentRedshift"]
self.omega_lambda = self.parameters["CosmologyOmegaLambdaNow"]
self.omega_matter = self.parameters["CosmologyOmegaMatterNow"]
self.hubble_constant = self.parameters[
"CosmologyHubbleConstantNow"]
else:
self.current_redshift = self.omega_lambda = self.omega_matter = \
self.hubble_constant = self.cosmological_simulation = 0.0
self.particle_types = []
self.current_time = self.parameters["InitialTime"]
if self.parameters["NumberOfParticles"] > 0 and \
"AppendActiveParticleType" in self.parameters.keys():
# If this is the case, then we know we should have a DarkMatter
# particle type, and we don't need the "io" type.
self.parameters["AppendActiveParticleType"].append("DarkMatter")
else:
# We do not have an "io" type for Enzo particles if the
# ActiveParticle machinery is on, as we simply will ignore any of
# the non-DarkMatter particles in that case. However, for older
# datasets, we call this particle type "io".
self.particle_types = ["io"]
for ptype in self.parameters.get("AppendActiveParticleType", []):
self.particle_types.append(ptype)
self.particle_types = tuple(self.particle_types)
self.particle_types_raw = self.particle_types
if self.dimensionality == 1:
self._setup_1d()
elif self.dimensionality == 2:
self._setup_2d()