def build_text_file_table_cell(self, task):
'''Build a table cell containing links to the stdout/err output'''
bat = task.batch_array_task
text_path = RunBatch.batch_array_task_text_file_path(bat)
text_file = os.path.basename(text_path)
err_path = RunBatch.batch_array_task_err_file_path(bat)
err_file = os.path.basename(err_path)
with self.tag("td", style="text-align: left"):
for ft, path, filename in ((FT_TEXT_FILE, text_path, text_file),
(FT_ERR_FILE, err_path, err_file)):
with self.tag("div"):
if os.path.isfile(path):
with self.tag(
"a",
style="text-align: left",
href='ViewTextFile.py?%s=%d&%s=%d&%s=%s' %
(BATCH_ARRAY_ID, bat.batch_array.batch_array_id,
TASK_ID, bat.task_id, FILE_TYPE, ft),
title=path):
self.text(filename)
else:
with self.tag("span",
style="text-align: left",
title='Text file not available'):
self.text(filename)
def build_text_file_table_cell(self, task):
'''Build a table cell containing links to the stdout/err output'''
bat = task.batch_array_task
text_path = RunBatch.batch_array_task_text_file_path(bat)
text_file = os.path.basename(text_path)
err_path = RunBatch.batch_array_task_err_file_path(bat)
err_file = os.path.basename(err_path)
with self.tag("td", style="text-align: left"):
for ft, path, filename in (
(FT_TEXT_FILE, text_path, text_file),
(FT_ERR_FILE, err_path, err_file)):
with self.tag("div"):
if os.path.isfile(path):
with self.tag(
"a", style="text-align: left",
href='ViewTextFile.py?%s=%d&%s=%d&%s=%s' %
(BATCH_ARRAY_ID, bat.batch_array.batch_array_id,
TASK_ID, bat.task_id, FILE_TYPE, ft),
title=path):
self.text(filename)
else:
with self.tag(
"span",
style="text-align: left",
title='Text file not available'):
self.text(filename)
def delete_run(my_batch, my_run):
if delete_action in (A_DELETE_ALL, A_DELETE_TEXT):
for bat in RunBatch.BPBatchArrayTask.select_by_run(my_run):
remove_if_exists(RunBatch.batch_array_task_text_file_path(bat))
remove_if_exists(RunBatch.batch_array_task_err_file_path(bat))
if delete_action in (A_DELETE_ALL, A_DELETE_OUTPUT):
remove_if_exists(RunBatch.run_out_file_path(my_batch, my_run))
def delete_run(my_batch, my_run):
if delete_action in (A_DELETE_ALL, A_DELETE_TEXT):
for bat in RunBatch.BPBatchArrayTask.select_by_run(my_run):
remove_if_exists(RunBatch.batch_array_task_text_file_path(bat))
remove_if_exists(RunBatch.batch_array_task_err_file_path(bat))
if delete_action in (A_DELETE_ALL, A_DELETE_OUTPUT):
remove_if_exists(RunBatch.run_out_file_path(my_batch, my_run))
def do_it(batch_array_id, task_id):
batch_array = RunBatch.BPBatchArray.select(batch_array_id)
bat = RunBatch.BPBatchArrayTask.select_by_batch_array_and_task_id(
batch_array, task_id)
if bat is None:
show_help()
return
run = bat.run
my_batch = run.batch
file_type = BATCHPROFILER_VARIABLES[FILE_TYPE]
if file_type == FT_TEXT_FILE:
show_file(RunBatch.batch_array_task_text_file_path(bat))
elif file_type == FT_ERR_FILE:
show_file(RunBatch.batch_array_task_err_file_path(bat))
elif file_type == FT_OUT_FILE:
download_attachment(RunBatch.run_out_file(my_batch, my_run),
RunBatch.run_out_file_path(my_batch, my_run))
else:
show_help("Unknown file type: %s" % file_type)
def do_it(batch_array_id, task_id):
batch_array = RunBatch.BPBatchArray.select(batch_array_id)
bat = RunBatch.BPBatchArrayTask.select_by_batch_array_and_task_id(
batch_array, task_id)
if bat is None:
show_help()
return
run = bat.run
my_batch = run.batch
file_type = BATCHPROFILER_VARIABLES[FILE_TYPE]
if file_type == FT_TEXT_FILE:
show_file(RunBatch.batch_array_task_text_file_path(bat))
elif file_type == FT_ERR_FILE:
show_file(RunBatch.batch_array_task_err_file_path(bat))
elif file_type == FT_OUT_FILE:
download_attachment(
RunBatch.run_out_file(my_batch, my_run),
RunBatch.run_out_file_path(my_batch, my_run))
else:
show_help("Unknown file type: %s" % file_type)
def build_job_table_body(self):
with self.tag("tbody"):
for task_status in self.tasks:
assert isinstance(task_status, RunBatch.BPJobTaskStatus)
task = task_status.job_task
status = task_status.status
assert isinstance(task, RunBatch.BPJobTask)
run = task.batch_array_task.run
assert isinstance(run, RunBatch.BPRun)
job = task.job
assert isinstance(job, RunBatch.BPJob)
out_file = RunBatch.run_out_file(self.my_batch, run)
out_path = RunBatch.run_out_file_path(self.my_batch, run)
with self.tag("tr"):
with self.tag("td"):
self.text(str(run.bstart))
with self.tag("td"):
self.text(str(run.bend))
with self.tag("td"):
self.text(str(job.job_id))
with self.tag("td"):
self.text(str(task.batch_array_task.task_id))
if status == RunBatch.JS_DONE:
with self.tag("td"):
cpu = task_status.created - job.created
self.text("Complete (%.2f sec)" %
(cpu.total_seconds()))
else:
with self.tag("td", style='color:red'):
with self.tag("div"):
self.text(status.lower().capitalize())
with self.tag("div"):
with self.tag("form",
action="ViewBatch.py",
method="POST",
target="ResubmitWindow"):
self.doc.input(type="hidden",
name=BATCH_ID)
self.doc.input(type="hidden",
name=RUN_ID,
value=str(run.run_id))
self.doc.input(type="hidden",
name=SUBMIT_RUN,
value=RunBatch.JS_ONE)
self.doc.stag("input",
type='submit',
name="Resubmit_Button",
value=RESUBMIT)
self.build_text_file_table_cell(task)
if self.my_batch.wants_measurements_file:
with self.tag("td"):
if os.path.isfile(out_path):
with self.tag(
"a",
href='ViewTextFile.py?run_id=%d&%s=%s'
% (run.run_id, FILE_TYPE, FT_OUT_FILE),
title=out_path):
self.text(out_file)
else:
with self.tag(
"span",
title='Output file not available'):
self.text(out_file)
#
# This cell contains the form that deletes things
#
with self.tag("td"):
with self.tag("form",
action='DeleteFile.py',
method='POST'):
self.doc.input(type="hidden",
name=RUN_ID,
value=str(run.run_id))
text_file = os.path.basename(
RunBatch.batch_array_task_text_file_path(
task.batch_array_task))
for action, filename in (
(A_DELETE_TEXT, text_file),
(A_DELETE_OUTPUT,
RunBatch.run_out_file(self.my_batch, run)),
(A_DELETE_ALL, "all files for this run")):
self.doc.stag(
"input",
type="submit",
name=K_DELETE_ACTION,
value=action,
title='Delete file %s' % filename,
onclick='return confirm("Do you really want'
'to delete %s?")' % filename)
def build_job_table_body(self):
with self.tag("tbody"):
for task_status in self.tasks:
assert isinstance(task_status, RunBatch.BPJobTaskStatus)
task = task_status.job_task
status = task_status.status
assert isinstance(task, RunBatch.BPJobTask)
run = task.batch_array_task.run
assert isinstance(run, RunBatch.BPRun)
job = task.job
assert isinstance(job, RunBatch.BPJob)
out_file = RunBatch.run_out_file(self.my_batch, run)
out_path = RunBatch.run_out_file_path(self.my_batch, run)
with self.tag("tr"):
with self.tag("td"):
self.text(str(run.bstart))
with self.tag("td"):
self.text(str(run.bend))
with self.tag("td"):
self.text(str(job.job_id))
with self.tag("td"):
self.text(str(task.batch_array_task.task_id))
if status == RunBatch.JS_DONE:
with self.tag("td"):
cpu = task_status.created - job.created
self.text("Complete (%.2f sec)" %
(cpu.total_seconds()))
else:
with self.tag("td", style='color:red'):
with self.tag("div"):
self.text(status.lower().capitalize())
with self.tag("div"):
with self.tag("form",
action="ViewBatch.py",
method="POST",
target="ResubmitWindow"):
self.doc.input(
type="hidden", name=BATCH_ID)
self.doc.input(
type="hidden",
name=RUN_ID,
value=str(run.run_id))
self.doc.input(
type="hidden",
name=SUBMIT_RUN,
value=RunBatch.JS_ONE)
self.doc.stag(
"input",
type='submit',
name="Resubmit_Button",
value=RESUBMIT)
self.build_text_file_table_cell(task)
if self.my_batch.wants_measurements_file:
with self.tag("td"):
if os.path.isfile(out_path):
with self.tag(
"a",
href='ViewTextFile.py?run_id=%d&%s=%s' %
(run.run_id, FILE_TYPE, FT_OUT_FILE),
title=out_path):
self.text(out_file)
else:
with self.tag("span",
title='Output file not available'):
self.text(out_file)
#
# This cell contains the form that deletes things
#
with self.tag("td"):
with self.tag("form", action='DeleteFile.py', method='POST'):
self.doc.input(
type="hidden", name=RUN_ID,
value = str(run.run_id))
text_file = os.path.basename(
RunBatch.batch_array_task_text_file_path(
task.batch_array_task))
for action, filename in (
(A_DELETE_TEXT, text_file),
(A_DELETE_OUTPUT, RunBatch.run_out_file(self.my_batch, run)),
(A_DELETE_ALL, "all files for this run")):
self.doc.stag(
"input",
type="submit", name=K_DELETE_ACTION,
value=action,
title='Delete file %s' % filename,
onclick='return confirm("Do you really want'
'to delete %s?")' % filename)
