def __init__(self,dset_labels=None,motion_labels=None,suffix_in='',suffix_out='_m'):
AfniProcess.__init__(self)
self.required_kwargs = ['dset_labels','motion_labels','suffix_in','suffix_out']
self.dset_labels = dset_labels
self.motion_labels = motion_labels
self.suffix_in = suffix_in
self.suffix_out = suffix_out
def __init__(self,dset_labels=None,suffix_in='_mb',suffix_out='_mbn',calc_precision='float'):
AfniProcess.__init__(self)
self.required_kwargs = ['dset_labels','suffix_in','suffix_out','calc_precision']
self.dset_labels = dset_labels
self.suffix_in = suffix_in
self.suffix_out = suffix_out
self.calc_precision = calc_precision
def __init__(self,dset_labels=None,suffix_in='_mbnf',anat_name=None,talairach_dxyz=None):
AfniProcess.__init__(self)
self.required_kwargs = ['dset_labels','suffix_in','anat_name','talairach_dxyz']
self.dset_labels = dset_labels
self.suffix_in = suffix_in
self.anat_name = anat_name
self.talairach_dxyz = talairach_dxyz
def __init__(self,dset_labels=None,suffix_in='_mbn',suffix_out='_mbnf',highpass_val=.011):
AfniProcess.__init__(self)
self.required_kwargs = ['dset_labels','suffix_in','suffix_out','highpass_val']
self.dset_labels = dset_labels
self.suffix_in = suffix_in
self.suffix_out = suffix_out
self.highpass_val = highpass_val
def __init__(self,dset=None, format='+orig', suffix_out='f',
highpass_val=.011):
AfniProcess.__init__(self)
self.dset = dset
self.format = format
self.suffix_out = suffix_out
self.highpass_val = highpass_val
def __init__(self,dset_labels=None,raw_funcs=None,leadin=None,leadouts=None):
AfniProcess.__init__(self)
self.required_kwargs = ['dset_labels','raw_funcs','leadin','leadouts']
self.dset_labels = dset_labels
self.raw_funcs = raw_funcs
self.leadin = leadin
self.leadouts = leadouts
self.suffix_out = ''
def __init__(self, dset=None, format='+orig', suffix_out='n', calc_precision='float',
average_dset=None, average_format='+orig'):
AfniProcess.__init__(self)
self.dset = dset
self.format = format
self.suffix_out = suffix_out
self.calc_precision = calc_precision
self.average_dset = average_dset
self.average_format = average_format
def __init__(self,anat_name=None,rawdir_searchexp='./*/',dicomprefix='I*',
movedir='../../'):
AfniProcess.__init__(self)
self.required_kwargs = ['anat_name','rawdir_searchexp','dicomprefix',
'movedir']
self.anat_name = anat_name
self.rawdir_searchexp = rawdir_searchexp
self.dicomprefix = dicomprefix
self.movedir = movedir
self.isvalues = None
def __init__(self,dset_labels=None,scripts_dir='scripts',talairach_path=None,
suffix_in='_mbnf',suffix_out='_masked',talairach_dxyz=None):
AfniProcess.__init__(self)
self.required_kwargs = ['dset_labels','scripts_dir','talairach_path',
'suffix_in','suffix_out','talairach_dxyz']
self.dset_labels = dset_labels
self.scripts_dir = scripts_dir
self.talairach_path = talairach_path
self.suffix_in = suffix_in
self.suffix_out = suffix_out
self.talairach_dxyz = talairach_dxyz
def __init__(self,dset_labels=None,pfiles_by_func=None,tr_bytes=393216,
nslices=None,isvalues=None,tr_time=None,leadin=None,leadout=None):
AfniProcess.__init__(self)
self.required_kwargs = ['dset_labels','pfiles_by_func','tr_bytes','nslices',
'isvalues','tr_time','leadin','leadout']
self.dset_labels = dset_labels
self.pfiles_by_func = pfiles_by_func
self.tr_bytes = tr_bytes
self.nslices = nslices
self.isvalues = isvalues
self.tr_time = tr_time
self.leadin = leadin
self.leadout = leadout
self.tcat_suffix = '_crop'
self.tshift_suffix = '_cropts'
def __init__(self, anat_name=None, raw_anat=None):
AfniProcess.__init__(self)
self.anat_name = anat_name
self.raw_anat = raw_anat
def __init__(self,dset=None, anat_name=None, talairach_dxyz=None):
AfniProcess.__init__(self)
self.dset = dset
self.anat_name = anat_name
self.dxyz = talairach_dxyz
def __init__(self, dset=None, format='+tlrc'):
AfniProcess.__init__(self)
self.dset = dset
self.format = format
def __init__(self,dset=None, raw_funcs=None, leadin=None, leadout=None):
AfniProcess.__init__(self)
self.dset = dset
self.raw_funcs = raw_funcs
self.leadin = leadin
self.leadout = leadout
def __init__(self, anat_name=None, talairach_path=None):
AfniProcess.__init__(self)
self.anat_name = anat_name
self.talairach_path = talairach_path
def __init__(self, dset_labels=None, suffix_in="_m", suffix_out="_mb", kernel=4):
AfniProcess.__init__(self)
self.dset_labels = dset_labels
self.suffix_in = suffix_in
self.suffix_out = suffix_out
self.kernel = kernel
def __init__(self,anat_name=None,raw_anat=None):
AfniProcess.__init__(self)
self.required_kwargs = ['anat_name','raw_anat']
self.anat_name = anat_name
self.raw_anat = raw_anat
def __init__(self,anat_name=None,talairach_path=None):
AfniProcess.__init__(self)
self.required_kwargs = ['anat_name','talairach_path']
self.anat_name = anat_name
self.talairach_path = talairach_path
def __init__(self, dset=None, format='+orig', suffix_out='b', kernel=4):
AfniProcess.__init__(self)
self.dset = dset
self.suffix_out = suffix_out
self.kernel = kernel
self.format = format
def __init__(self,dset_labels=None,afni_format='+tlrc'):
AfniProcess.__init__(self)
self.dset_labels = dset_labels
self.afni_format = afni_format
def __init__(self,dset=None, format='+orig', motionlabel=None, suffix_out='_m'):
AfniProcess.__init__(self)
self.dset= dset
self.motionlabel = motionlabel
self.suffix_out = suffix_out
self.format = format