def getStructureChainsFromFile(id,filename):
#This method receives a PDBid and split it into its chains which will be stored in the dicStructures. It dictionary
# will be returned
dicStructures = {}
structure = loadStructure(id,filename)
seqRes = structure.get_SeqRes()
for chainId in seqRes.getAllChain():
parser = FcfrpPDBParser(PERMISSIVE=True,LayoutDatabase=False)
dicStructures[chainId] = parser.loadStructureFromFile(id, filename, chainId)
return dicStructures
def loadStructure(id,fileName,PERMISSIVE=True):
#Give id and fileName, return a biopython Structure
#parser = PDBParser(PERMISSIVE)
parser = FcfrpPDBParser(PERMISSIVE,LayoutDatabase=False)
#return parser.get_structure(id, fileName)
return parser.loadStructureFromFile(id, fileName)
