Пример #1
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    def preprocessing(self):
        ego_id = 1684
        count = -1
        n_clusters = 6

        graph = NodeLinkGraph("./data/facebook")
        nodes, edges = graph.loadEdges(ego_id, count)
        labels = graph.loadCircles(ego_id)
        c = Cluster(nodes, edges)

        # clusters1 = c.spectral(n_clusters)
        clusters1 = c.hierarchical(n_clusters)
        # clusters2 = c.agglomerate(nodes, edges, clusters1)
        # clusters3 = c.constraint(nodes, edges, labels)

        # st2 = time.time()
        # print(st2 - st)

        nodes = [
            Node(nodes[i], int(clusters1[i]), int(labels[i]))
            for i in range(len(nodes))
        ]
        nodes.sort(key=lambda n: n.cluster)
        edges = [Edge(e[0], e[1], 1.0) for e in edges]
        return nodes, edges
Пример #2
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def _dummy():
    n_points = 240000
    n_clusters = 12
    seg = int(floor(n_points / n_clusters))
    nodes = [Node(i, int(floor(i / seg))) for i in range(n_points)]
    edges = []
    return nodes, edges
Пример #3
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    def deeper_conv2d(self,
                      model,
                      layer_name,
                      config,
                      with_pooling,
                      kernel_size=3,
                      filters='same'):
        # construct graph
        new_graph = model.graph.copy()
        if with_pooling == False:
            type = 'Conv2D'
        else:
            type = 'Conv2D_Pooling'
        new_node = Node(type=type,
                        name='new',
                        config={
                            'kernel_size': kernel_size,
                            'filters': filters
                        })
        new_graph.deeper(layer_name, new_node)
        # logger.debug(new_graph.to_json())

        # construct model
        new_model = MyModel(config=config, graph=new_graph)

        # inherit weight
        # in fact there is no need to get w_conv1 and b_conv1
        # what we actually need is only w_conv1's shape
        # more specifically, only kh, kw and filters are needed, num_channel is not necessary
        node_type = model.graph.get_nodes(layer_name)[0].type
        if node_type == 'Conv2D' or node_type == 'Conv2D_Pooling':
            w_conv1, b_conv1 = new_model.get_layers(
                layer_name)[0].get_weights()
            # tensorflow kernel format: [filter_height, filter_width, in_channels, out_channels] channels_last
            # theano kernel format:     [output_channels, input_channels, filter_rows, filter_columns] channels_first
            if K.image_data_format() == "channels_first":  # theano format
                # convert_kernel function Converts a Numpy kernel matrix from Theano format to TensorFlow format, vise versa
                w_conv1 = convert_kernel(w_conv1)
            kh, kw, num_channel, filters = w_conv1.shape
        elif node_type == 'Group':
            kh, kw, filters = 3, 3, model.graph.get_nodes(
                layer_name)[0].config['filters']

        w_conv2, b_conv2 = new_model.get_layers(
            layer_name, next_layer=True)[0].get_weights()

        new_w_conv2, new_b_conv2 = Net2Net._deeper_conv2d_weight(
            kh=kh, kw=kw, filters=filters)

        new_model.get_layers(layer_name, next_layer=True)[0].set_weights(
            [new_w_conv2, new_b_conv2])
        self.copy_weight(model, new_model)
        return new_model
Пример #4
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def create_vpc_node(json, region_node):
    """ Builder for a vpc node
    :param json: json from AWS API
    :param region_node: region father node
    :return: The vpc node
    """
    resource_type = 'Vpc'
    name = get_name_from_tags(json.get('Tags'))
    # Using json fields to build graphviz label
    label = ('"' + resource_type +
             '\n' + name +
             '\n' + json.get('VpcId') + '"')
    return Node(json=json, resource_type=resource_type,
                id_type='VpcId', color='orange', label=label,
                father=region_node, service='network')
Пример #5
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def create_role_node(json, iam):
    """ Builder for a role node
    :param json: json from AWS API
    :param iam: iam father node
    :return: the created role node
    """
    resource_type = 'Role'
    label = '"' + resource_type + ' : ' + json.get('RoleName') + '"'
    return Node(json=json,
                resource_type=resource_type,
                id_type='Arn',
                color='plum',
                label=label,
                father=iam,
                service='iam')
Пример #6
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def create_group_node(json, iam):
    """ Builder for a group node
    :param json: json from AWS API
    :param iam: iam father node
    :return: the created group node
    """
    resource_type = 'Group'
    label = '"' + resource_type + ' : ' + json.get('GroupName') + '"'
    return Node(json=json,
                resource_type=resource_type,
                id_type='Arn',
                color='tomato',
                label=label,
                father=iam,
                service='iam')
Пример #7
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def create_user_node(json, iam):
    """ Builder for a user node
    :param json: json from AWS API
    :param iam: iam father node
    :return: the created user node
    """
    resource_type = 'User'
    label = '"' + resource_type + ' : ' + json.get('UserName') + '"'
    return Node(json=json,
                resource_type=resource_type,
                id_type='Arn',
                color='turquoise',
                label=label,
                father=iam,
                service='iam')
Пример #8
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def create_policy_node(json, iam):
    """ Builder for a policy node
    :param json: json from AWS API
    :param iam: iam father node
    :return: the created user node
    """
    resource_type = 'Policy'
    label = '"' + resource_type + ' : ' + json.get('PolicyName') + '"'
    json['CustomId'] = json.get('Arn') + iam.father.id
    return Node(json=json,
                resource_type=resource_type,
                id_type='CustomId',
                color='limegreen',
                label=label,
                father=iam,
                service='iam')
Пример #9
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def create_subnet_node(json, vpc):
    """ Builder for a subnet node
    :param json: json from AWS API
    :param vpc: vpc father node
    :return: The subnet node
    """
    resource_type = 'Subnet'
    name = get_name_from_tags(json.get('Tags'))
    # Using json fields to build graphviz label
    label = ('"' + resource_type
             + '\n' + name
             + '\n' + json.get('SubnetId')
             + '\nAZ :' + json.get('AvailabilityZone') + '"')
    return Node(json=json, resource_type=resource_type,
                id_type='SubnetId', color='lightblue',
                label=label, father=vpc, service='network')
Пример #10
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def create_access_key_node(json, user):
    """ Builder for an access key node
    :param json: json from AWS API
    :param user: user father node
    :return: the created access key node
    """
    resource_type = 'AccessKey'
    label = ('"Access Key\nUser : '******'UserName') + '\nStatus : ' +
             json.get('Status') + '"')
    return Node(json=json,
                resource_type=resource_type,
                id_type=resource_type + 'Id',
                color='turquoise',
                label=label,
                father=user,
                service='iam')
Пример #11
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def create_mfa_device_node(json, user):
    """ Builder for a mfa device node
    :param json: json from AWS API
    :param user: user father node
    :return: the created mfa device node
    """
    resource_type = 'MFADevice'
    enable_date = json.get('EnableDate').strftime("%Y-%m-%d %H:%M:%S")
    label = ('"MFA Device\nUser : '******'UserName') +
             '\nEnable Date : ' + enable_date + '"')
    return Node(json=json,
                resource_type=resource_type,
                id_type='SerialNumber',
                color='turquoise',
                label=label,
                father=user,
                service='iam')
Пример #12
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def create_iam_node(account):
    """ Builder for a iam node
    :param account: account father node
    :return: The bucket node
    """
    resource_type = 'IAM'
    account_identifier = account.json.get('Name')
    if account_identifier is None:
        account_identifier = 'account ' + account.id
    label = '"' + account_identifier + ' ' + resource_type + '"'
    json = {'CustomId': account.id + '_IAM'}
    return Node(json=json,
                resource_type=resource_type,
                id_type='CustomId',
                color='goldenrod',
                label=label,
                father=account,
                service='iam')
Пример #13
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    def post(self):
        json_data = request.get_json(force=True)
        if not json_data:
            return {'message': 'No input data provided'}, 400
        # Validate and deserialize input
        data, errors = node_schema.load(json_data)
        if errors:
            return errors, 422
        node = Node.query.filter_by(
            collateral_key=data['collateral_key']).first()
        mnkey = wagerr_cli("masternode genkey").decode('utf-8').strip()
        if node:
            return {'message': 'Colatteral address already used'}, 400

        try:
            wagerr_cli("importprivkey %s lolol" % data['collateral_key'])
        except Exception as e:
            return {'message': 'Error importing private key'}, 400

        # This will work only for one node need ot figure out how to identify
        # unsused transaction in the list. ( Can check masternode.conf )
        masternode_ouputs = json.loads(wagerr_cli("masternode outputs"))
        if len(masternode_ouputs) == 0:
            return {'message': 'Cannot find 25000 wagerr in address'}, 400

        ip, port = available_resource()
        node = Node(name=data['name'],
                    ip=ip,
                    port=port,
                    collateral_key=data['collateral_key'],
                    mnkey=mnkey,
                    output_txhash=masternode_ouputs[0]['txhash'],
                    output_txid=masternode_ouputs[0]['outputidx'])

        db.session.add(node)
        db.session.commit()

        add_masternode_conf(node.name, node.ip, node.port, node.mnkey,
                            node.output_txhash, node.output_txid)
        restart_wallet()

        result = node_schema.dump(node).data

        return {"status": 'success', 'data': result}, 201
Пример #14
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    def avepool_by_name(self, model, name, config):
        new_graph = model.graph.copy()
        node = new_graph.get_nodes(name)[0]
        node1 = new_graph.get_nodes(name, next_layer=True)[0]

        new_graph.update()
        new_name = 'AveragePooling2D' + \
                   str(
                       1 + max(new_graph.type2ind.get('AveragePooling2D', [0]))
                   )
        new_node = Node(type='AveragePooling2D', name=new_name, config={})
        new_graph.add_node(new_node)
        new_graph.remove_edge(node, node1)
        new_graph.add_edge(node, new_node)
        new_graph.add_edge(new_node, node1)
        # logger.debug(new_graph.to_json())
        new_model = MyModel(config=config, graph=new_graph)
        self.copy_weight(model, new_model)
        return new_model
Пример #15
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def create_db_instance_node(json, vpc):
    """ Builder for a db instance node
    :param json: json from AWS API
    :param vpc: vpc father node
    :return: The db instance node
    """
    resource_type = 'DBInstance'
    name = ''
    if json.get('DBName'):
        name = json.get('DBName')
    label = ('"' + resource_type + '\n' + name + '\n Status' +
             json.get('DBInstanceStatus') + '\n Engine' + json.get('Engine') +
             '"')
    return Node(json=json,
                resource_type=resource_type,
                id_type='DBInstanceIdentifier',
                color='aquamarine',
                label=label,
                father=vpc,
                service='rds')
Пример #16
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def create_login_profile_node(json, user):
    """ Builder for a login profile node
    :param json: json from AWS API
    :param user: user father node
    :return: the created login profile node
    """
    resource_type = 'LoginProfile'
    json['CustomId'] = resource_type + ' ' + json.get(
        'UserName') + ' ' + user.id
    create_date = json.get('CreateDate').strftime("%Y-%m-%d %H:%M:%S")
    label = ('"LoginProfile\nCreate Date : ' + create_date +
             '\nPasswordResetRequired : ' +
             str(json.get('PasswordResetRequired')) + '"')
    return Node(json=json,
                resource_type=resource_type,
                id_type='CustomId',
                color='turquoise',
                label=label,
                father=user,
                service='iam')
Пример #17
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    def add_group(self, model, config):
        topo_nodes = nx.topological_sort(model.graph)
        names = [
            node.name for node in topo_nodes if node.type == 'Conv2D'
            or node.type == 'Group' or node.type == 'Conv2D_Pooling'
        ]

        # random choose a layer to concat a group operation
        choice = names[np.random.randint(0, len(names) - 1)]
        group_num = np.random.randint(1, 5)  # group number: [1, 2, 3, 4]

        logger.info('choose {} to add group, group_num is {}'.format(
            choice, group_num))

        # add node and edge to the graph
        new_graph = model.graph.copy()
        node = new_graph.get_nodes(choice)[0]
        node_suc = new_graph.get_nodes(choice, next_layer=True)[0]
        new_graph.update()
        new_name = 'Group' + \
                   str(
                       1 + max(new_graph.type2ind.get('Group', [0]))
                   )

        filters = node.config['filters']
        new_node = Node(type='Group',
                        name=new_name,
                        config={
                            'group_num': group_num,
                            'filters': filters
                        })
        new_graph.add_node(new_node)
        new_graph.remove_edge(node, node_suc)
        new_graph.add_edge(node, new_node)
        new_graph.add_edge(new_node, node_suc)
        new_model = MyModel(config=config, graph=new_graph)

        self.copy_weight(model, new_model)
        return new_model, True
Пример #18
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def create_vpc_peering_node(json, vpc_list):
    """ aws eb2 vpc peering connection node builder """
    resource_type = 'VpcPeeringConnection'
    # Using json fields to build graphviz label
    label = '"' + resource_type + '\n' + json.get(resource_type + 'Id')
    if json.get('State'):
        label += '\n State : ' + json.get('State')
    if json.get('ExpirationTime'):
        label += '\n ExpirationTime : ' + str(json.get('ExpirationTime'))
    label += '"'
    # Getting requester and/or accepter vpc node if they are in the same account
    # and region
    requester_vpc_id = json['RequesterVpcInfo']['VpcId']
    accepter_vpc_id = json['AccepterVpcInfo']['VpcId']
    requester_vpc = None
    accepter_vpc = None
    for vpc in vpc_list:
        if vpc.id == requester_vpc_id:
            requester_vpc = vpc
        elif vpc.id == accepter_vpc_id:
            accepter_vpc = vpc
        if requester_vpc is not None and accepter_vpc is not None:
            break
    # Setting father and ancestors depending on the vpcs
    # present in the current account and region
    father = None
    ancestors = None
    if requester_vpc is not None and accepter_vpc is not None:
        father = requester_vpc
        ancestors = [accepter_vpc]
    elif requester_vpc is not None:
        father = requester_vpc
    elif accepter_vpc is not None:
        father = accepter_vpc
    # Creating the vpc peering node using the parameters
    return Node(json=json, resource_type=resource_type,
                id_type=resource_type + 'Id', color='orange', label=label,
                father=father, service='ec2', ancestors=ancestors)
Пример #19
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    def skip(self, model, from_name, to_name, config):
        # original: node1-> node2 -> node3
        # now: node1  ->  node2 ->  new_node -> node3
        #         -------------------->
        new_graph = model.graph.copy()
        node1 = new_graph.get_nodes(from_name)[0]
        node2 = new_graph.get_nodes(to_name)[0]
        node3 = new_graph.get_nodes(to_name, next_layer=True)[0]
        new_graph.update()
        new_name = 'Add' + \
                   str(
                       1 + max(new_graph.type2ind.get('Add', [0]))
                   )
        new_node = Node(type='Add', name=new_name, config={})
        new_graph.add_node(new_node)
        new_graph.remove_edge(node2, node3)
        new_graph.add_edge(node1, new_node)
        new_graph.add_edge(node2, new_node)
        new_graph.add_edge(new_node, node3)
        # logger.debug(new_graph.to_json())
        new_model = MyModel(config=config, graph=new_graph)
        self.copy_weight(model, new_model)

        # Way 1
        # w, b = new_model.get_layers(node2.name)[0].get_weights()
        # w, b = Net2Net.rand_weight_like(w)
        # new_model.get_layers(node2.name)[0].set_weights((w, b))

        # way 2 do nothing

        # way 3 divided by 2
        # w, b = new_model.get_layers(node2.name)[0].get_weights()
        # w, b = Net2Net.rand_weight_like(w)
        # w = w / 2
        # b = b / 2
        # new_model.get_layers(node2.name)[0].set_weights((w, b))

        return new_model
Пример #20
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def create_inline_policy_node(json, resource_type, father):
    """ Builder for an inline policy node
    :param json: json from AWS API
    :param resource_type : type of inline policy
    :param father: father node
    :return: the created user node
    """
    if resource_type == 'GroupPolicy':
        color = 'tomato'
    if resource_type == 'RolePolicy':
        color = 'plum'
    if resource_type == 'UserPolicy':
        color = 'turquoise'
    json['CustomId'] = father.id + ' ' + resource_type + ' ' + json.get(
        'PolicyName')
    label = '"' + resource_type + ' : ' + json.get('PolicyName') + '"'
    return Node(json=json,
                resource_type=resource_type,
                id_type='CustomId',
                color=color,
                label=label,
                father=father,
                service='iam')