InputValidation_42 = InputValidation(constrkw={}, name='InputValidation', library=Adt)
masterNet.addNode(InputValidation_42,86,318)
apply(InputValidation_42.configure, (), {'paramPanelImmediate': 1, 'expanded': False})
except:
print "WARNING: failed to restore InputValidation named InputValidation in network masterNet"
print_exc()
InputValidation_42=None
#masterNet.run()
masterNet.freeze()
## saving connections for network vs-obj6 ##
if PublicServerLigandDB_37 is not None and FilterLigandsNode_38 is not None:
try:
masterNet.connectNodes(
PublicServerLigandDB_37, FilterLigandsNode_38, "ligDB", "ligands", blocking=True
, splitratio=[0.33190502385589948, 0.21642002589850867])
except:
print "WARNING: failed to restore connection between PublicServerLigandDB_37 and FilterLigandsNode_38 in network masterNet"
if FilterLigandsNode_38 is not None and VirtualScreening_1 is not None:
try:
masterNet.connectNodes(
FilterLigandsNode_38, VirtualScreening_1, "ligands", "ComputeGrids_GetComputeGridsInputs_ligands", blocking=True
, splitratio=[0.37455111543238506, 0.32420948165762498])
except:
print "WARNING: failed to restore connection between FilterLigandsNode_38 and VirtualScreening_1 in network masterNet"
if PreserveCharges__39 is not None and VirtualScreening_1 is not None:
try:
masterNet.connectNodes(
PreserveCharges__39, VirtualScreening_1, "value_bool", "PrepareReceptor_PrepareReceptorWS_PrepareReceptorOpalService_ws_nbcr_net_C", blocking=True
, splitratio=[0.26471965480569831, 0.73857142767746442])
masterNet.addNode(Local_Ligand_Directory_38,446,40)
Local_Ligand_Directory_38.inputPortByName['directory'].widget.set(r"VinaVSlocal_0.1_input/ligands", run=False)
apply(Local_Ligand_Directory_38.configure, (), {'paramPanelImmediate': 1})
except:
print "WARNING: failed to restore DirBrowserNE named Local Ligand Directory in network masterNet"
print_exc()
Local_Ligand_Directory_38=None
#masterNet.run()
masterNet.freeze()
## saving connections for network VinaVSlocal-0.1 ##
if StructureBrowser_0 is not None and PrepareReceptor_2 is not None:
try:
masterNet.connectNodes(
StructureBrowser_0, PrepareReceptor_2, "receptor_obj", "Pdb2pqrWS_CheckFileFormat_value", blocking=True
, splitratio=[0.2411512852991527, 0.43763306853849476])
except:
print "WARNING: failed to restore connection between StructureBrowser_0 and PrepareReceptor_2 in network masterNet"
Vina_20 = masterNet.nodes[3]
if PrepareReceptor_2 is not None and Vina_20 is not None:
try:
masterNet.connectNodes(
PrepareReceptor_2, Vina_20, "PrepareReceptorWS_UpdateReceptor_receptor_prepared_obj", "PrepareVinaInputs_receptor_obj", blocking=True
, splitratio=[0.7480148250853722, 0.53664021522471628])
except:
print "WARNING: failed to restore connection between PrepareReceptor_2 and Vina_20 in network masterNet"
if Vina_Config_File_Browser_1 is not None and Vina_20 is not None:
try:
masterNet.connectNodes(
Vina_Config_File_Browser_1, Vina_20, "filename", "AutodockVina_Screening_kryptonite_nbcr_net_config", blocking=True
masterNet.addNode(Output_Directory_Browser_32,905,178)
Output_Directory_Browser_32.inputPortByName['directory'].widget.set(r"AutoGrid_0.1_output", run=False)
apply(Output_Directory_Browser_32.configure, (), {'paramPanelImmediate': 1})
except:
print "WARNING: failed to restore DirBrowserNE named Output Directory Browser in network masterNet"
print_exc()
Output_Directory_Browser_32=None
#masterNet.run()
masterNet.freeze()
## saving connections for network AutoGrid_0.1 ##
if PublicServerLigandDB_10 is not None and ComputeGrids_0 is not None:
try:
masterNet.connectNodes(
PublicServerLigandDB_10, ComputeGrids_0, "ligDB", "GetComputeGridsInputs_ligands", blocking=True
, splitratio=[0.71040241021275885, 0.32432210892569779])
except:
print "WARNING: failed to restore connection between PublicServerLigandDB_10 and ComputeGrids_0 in network masterNet"
if PrepareReceptor_11 is not None and ComputeGrids_0 is not None:
try:
masterNet.connectNodes(
PrepareReceptor_11, ComputeGrids_0, "PrepareReceptorWS_UpdateReceptor_receptor_prepared_obj", "GetComputeGridsInputs_receptor_pdbqt", blocking=True
, splitratio=[0.37771324748037094, 0.29247414694141388])
except:
print "WARNING: failed to restore connection between PrepareReceptor_11 and ComputeGrids_0 in network masterNet"
if StructureBrowser_29 is not None and PrepareReceptor_11 is not None:
try:
masterNet.connectNodes(
StructureBrowser_29, PrepareReceptor_11, "receptor_obj", "Pdb2pqrWS_CheckFileFormat_value", blocking=True
, splitratio=[0.62789739082139784, 0.69687814536090076])
MakeGpfDpfCopies_13 = MakeGpfDpfCopies(constrkw={}, name='MakeGpfDpfCopies', library=Adt)
masterNet.addNode(MakeGpfDpfCopies_13,502,400)
apply(MakeGpfDpfCopies_13.configure, (), {'paramPanelImmediate': 1, 'expanded': False})
except:
print "WARNING: failed to restore MakeGpfDpfCopies named MakeGpfDpfCopies in network masterNet"
print_exc()
MakeGpfDpfCopies_13=None
#masterNet.run()
masterNet.freeze()
## saving connections for network TrajQRClustering-0.1 ##
if RMSD_1 is not None and TrajQR2_3 is not None:
try:
masterNet.connectNodes(
RMSD_1, TrajQR2_3, "string", "TrajQR_kryptonite_nbcr_net_rmsd", blocking=True
, splitratio=[0.34136199777603804, 0.27589115652596063])
except:
print "WARNING: failed to restore connection between RMSD_1 and TrajQR2_3 in network masterNet"
if Output_Directory_Path_2 is not None and TrajQR2_3 is not None:
try:
masterNet.connectNodes(
Output_Directory_Path_2, TrajQR2_3, "directory", "GetSelectedPDBs_pdb_out_dir", blocking=True
, splitratio=[0.48508950256597771, 0.43046378270767627])
except:
print "WARNING: failed to restore connection between Output_Directory_Path_2 and TrajQR2_3 in network masterNet"
if GPFTemplateBrowser_12 is not None and MakeGpfDpfCopies_13 is not None:
try:
masterNet.connectNodes(
GPFTemplateBrowser_12, MakeGpfDpfCopies_13, "gpf_template", "gpf_file", blocking=True
, splitratio=[0.28822475891698995, 0.59826911412993689])
MakeGpfDpfCopies_13 = MakeGpfDpfCopies(constrkw={}, name='MakeGpfDpfCopies', library=Adt)
masterNet.addNode(MakeGpfDpfCopies_13,362,466)
apply(MakeGpfDpfCopies_13.configure, (), {'paramPanelImmediate': 1, 'expanded': False})
except:
print "WARNING: failed to restore MakeGpfDpfCopies named MakeGpfDpfCopies in network masterNet"
print_exc()
MakeGpfDpfCopies_13=None
#masterNet.run()
masterNet.freeze()
## saving connections for network GROMOSClustering-0.1 ##
if TrajectoryPDBFile_7 is not None and GromosCluster_0 is not None:
try:
masterNet.connectNodes(
TrajectoryPDBFile_7, GromosCluster_0, "filename", "GROMOS_ClusterFiles_kryptonite_nbcr_net_traj", blocking=True
, splitratio=[0.40516597457034675, 0.47883762346301628])
except:
print "WARNING: failed to restore connection between TrajectoryPDBFile_7 and GromosCluster_0 in network masterNet"
if ActiveResidueFile_8 is not None and GromosCluster_0 is not None:
try:
masterNet.connectNodes(
ActiveResidueFile_8, GromosCluster_0, "filename", "GROMOS_ClusterFiles_kryptonite_nbcr_net_active", blocking=True
, splitratio=[0.35790962133037152, 0.58579177190104637])
except:
print "WARNING: failed to restore connection between ActiveResidueFile_8 and GromosCluster_0 in network masterNet"
if RMSD_9 is not None and GromosCluster_0 is not None:
try:
masterNet.connectNodes(
RMSD_9, GromosCluster_0, "string", "GROMOS_ClusterFiles_kryptonite_nbcr_net_rmsd", blocking=True
, splitratio=[0.50918524073258298, 0.2104640996462267])
masterNet.addNode(Index_6,32,189)
Index_6.inputPortByName['index'].widget.set(0, run=False)
apply(Index_6.configure, (), {'paramPanelImmediate': 1, 'expanded': False})
except:
print "WARNING: failed to restore Index named Index in network masterNet"
print_exc()
Index_6=None
#masterNet.run()
masterNet.freeze()
## saving connections for network ImageFigure ##
if Draw_Area_1 is not None and Histogram_0 is not None:
try:
masterNet.connectNodes(
Draw_Area_1, Histogram_0, "drawAreaDef", "drawAreaDef", blocking=True
, splitratio=[0.71050182771612547, 0.48216779631799078])
except:
print "WARNING: failed to restore connection between Draw_Area_1 and Histogram_0 in network masterNet"
if Histogram_0 is not None and ImageFigure_3 is not None:
try:
masterNet.connectNodes(
Histogram_0, ImageFigure_3, "plot", "plots", blocking=True
, splitratio=[0.59755305137816794, 0.58329747250836284])
except:
print "WARNING: failed to restore connection between Histogram_0 and ImageFigure_3 in network masterNet"
if ImageFigure_3 is not None and oneTexturedQuad_4 is not None:
try:
masterNet.connectNodes(
ImageFigure_3, oneTexturedQuad_4, "image", "image", blocking=True
, splitratio=[0.47798728751964126, 0.24202926139887365])
{'paramPanelImmediate': 1})
except:
print "WARNING: failed to restore DirBrowserNE named Output Directory Browser in network masterNet"
print_exc()
Output_Directory_Browser_21 = None
#masterNet.run()
masterNet.freeze()
## saving connections for network PrepareReceptor-0.1 ##
if StructureBrowser_18 is not None and PrepareReceptor2_0 is not None:
try:
masterNet.connectNodes(
StructureBrowser_18,
PrepareReceptor2_0,
"receptor_obj",
"Pdb2pqrWS_CheckFileFormat_value",
blocking=True,
splitratio=[0.51287662428234593, 0.74658029742646814])
except:
print "WARNING: failed to restore connection between StructureBrowser_18 and PrepareReceptor2_0 in network masterNet"
if Preserve_charges__19 is not None and PrepareReceptor2_0 is not None:
try:
masterNet.connectNodes(
Preserve_charges__19,
PrepareReceptor2_0,
"value_bool",
"PrepareReceptorWS_PrepareReceptorOpalService_ws_nbcr_net_C",
blocking=True,
splitratio=[0.44734707960554609, 0.37373648392115422])
except:
})
except:
print "WARNING: failed to restore GetMainURLFromListNode named GetMainURLFromList in network masterNet"
print_exc()
GetMainURLFromList_7 = None
#masterNet.run()
masterNet.freeze()
## saving connections for network AutoDockSL-0.1 ##
if Ligand_File_Browser_1 is not None and AutodockOpalService_kryptonite_nbcr_net_0 is not None:
try:
masterNet.connectNodes(
Ligand_File_Browser_1,
AutodockOpalService_kryptonite_nbcr_net_0,
"filename",
"pdbq",
blocking=True,
splitratio=[0.71138355030400446, 0.62231101649397191])
except:
print "WARNING: failed to restore connection between Ligand_File_Browser_1 and AutodockOpalService_kryptonite_nbcr_net_0 in network masterNet"
if DLG_output_name_2 is not None and AutodockOpalService_kryptonite_nbcr_net_0 is not None:
try:
masterNet.connectNodes(
DLG_output_name_2,
AutodockOpalService_kryptonite_nbcr_net_0,
"string",
"l",
blocking=True,
splitratio=[0.4369858136075192, 0.37322550913177743])
except:
apply(Index_6.configure, (), {'paramPanelImmediate': 1, 'expanded': False})
except:
print "WARNING: failed to restore Index named Index in network masterNet"
print_exc()
Index_6 = None
#masterNet.run()
masterNet.freeze()
## saving connections for network ImageFigure ##
if Draw_Area_1 is not None and Histogram_0 is not None:
try:
masterNet.connectNodes(
Draw_Area_1,
Histogram_0,
"drawAreaDef",
"drawAreaDef",
blocking=True,
splitratio=[0.71050182771612547, 0.48216779631799078])
except:
print "WARNING: failed to restore connection between Draw_Area_1 and Histogram_0 in network masterNet"
if Histogram_0 is not None and ImageFigure_3 is not None:
try:
masterNet.connectNodes(
Histogram_0,
ImageFigure_3,
"plot",
"plots",
blocking=True,
splitratio=[0.59755305137816794, 0.58329747250836284])
except:
masterNet.addNode(DPFTemplateBrowser_10,915,143)
DPFTemplateBrowser_10.inputPortByName['dpf_template_file'].widget.set(r"AutoDockML_0.1_input/2HTY_A.dpf", run=False)
apply(DPFTemplateBrowser_10.configure, (), {'paramPanelImmediate': 1})
except:
print "WARNING: failed to restore DPFTemplateBrowser named DPFTemplateBrowser in network masterNet"
print_exc()
DPFTemplateBrowser_10=None
#masterNet.run()
masterNet.freeze()
## saving connections for network AutoDockML-0.1 ##
if Output_Directory_7 is not None and DownloadSaveDir_6 is not None:
try:
masterNet.connectNodes(
Output_Directory_7, DownloadSaveDir_6, "directory", "path", blocking=True
, splitratio=[0.65546942220461224, 0.32042606395899709])
except:
print "WARNING: failed to restore connection between Output_Directory_7 and DownloadSaveDir_6 in network masterNet"
if AutodockVS_0 is not None and DownloadSaveDir_6 is not None:
try:
masterNet.connectNodes(
AutodockVS_0, DownloadSaveDir_6, "GetMainURLFromList_newurl", "url", blocking=True
, splitratio=[0.2182585732109612, 0.71171057897582179])
except:
print "WARNING: failed to restore connection between AutodockVS_0 and DownloadSaveDir_6 in network masterNet"
if PublicServerLigandDB_9 is not None and AutodockVS_0 is not None:
try:
masterNet.connectNodes(
PublicServerLigandDB_9, AutodockVS_0, "ligDB", "PrepareADVSInputs_ligands", blocking=True
, splitratio=[0.21870434345807416, 0.66803683999749475])
masterNet.addNode(VSOutputDirectory_25,10,4)
VSOutputDirectory_25.inputPortByName['directory'].widget.set(r"VSResults_0.1_input", run=False)
apply(VSOutputDirectory_25.configure, (), {'paramPanelImmediate': 1})
except:
print "WARNING: failed to restore DirBrowserNE named VSOutputDirectory in network masterNet"
print_exc()
VSOutputDirectory_25=None
#masterNet.run()
masterNet.freeze()
## saving connections for network VSResults-0.1 ##
if GetReceptors_0 is not None and ReceptorList_1 is not None:
try:
masterNet.connectNodes(
GetReceptors_0, ReceptorList_1, "filelist", "valueList", blocking=True
, splitratio=[0.48905913647612814, 0.29360410336373438])
except:
print "WARNING: failed to restore connection between GetReceptors_0 and ReceptorList_1 in network masterNet"
if ReceptorList_1 is not None and GetLigands_2 is not None:
try:
masterNet.connectNodes(
ReceptorList_1, GetLigands_2, "selection", "receptor", blocking=True
, splitratio=[0.42538364036717291, 0.58358889034815098])
except:
print "WARNING: failed to restore connection between ReceptorList_1 and GetLigands_2 in network masterNet"
if GetReceptors_0 is not None and GetLigands_2 is not None:
try:
masterNet.connectNodes(
GetReceptors_0, GetLigands_2, "filelist_paths", "receptorlist", blocking=True
, splitratio=[0.36424339756927371, 0.30463602511408611])
masterNet.addNode(Output_Directory_Browser_21,638,46)
Output_Directory_Browser_21.inputPortByName['directory'].widget.set(r"PrepareReceptor_0.1_output", run=False)
apply(Output_Directory_Browser_21.configure, (), {'paramPanelImmediate': 1})
except:
print "WARNING: failed to restore DirBrowserNE named Output Directory Browser in network masterNet"
print_exc()
Output_Directory_Browser_21=None
#masterNet.run()
masterNet.freeze()
## saving connections for network PrepareReceptor-0.1 ##
if StructureBrowser_18 is not None and PrepareReceptor2_0 is not None:
try:
masterNet.connectNodes(
StructureBrowser_18, PrepareReceptor2_0, "receptor_obj", "Pdb2pqrWS_CheckFileFormat_value", blocking=True
, splitratio=[0.51287662428234593, 0.74658029742646814])
except:
print "WARNING: failed to restore connection between StructureBrowser_18 and PrepareReceptor2_0 in network masterNet"
if Preserve_charges__19 is not None and PrepareReceptor2_0 is not None:
try:
masterNet.connectNodes(
Preserve_charges__19, PrepareReceptor2_0, "value_bool", "PrepareReceptorWS_PrepareReceptorOpalService_ws_nbcr_net_C", blocking=True
, splitratio=[0.44734707960554609, 0.37373648392115422])
except:
print "WARNING: failed to restore connection between Preserve_charges__19 and PrepareReceptor2_0 in network masterNet"
if PrepareReceptor2_0 is not None and SaveReceptor_20 is not None:
try:
masterNet.connectNodes(
PrepareReceptor2_0, SaveReceptor_20, "PrepareReceptorWS_UpdateReceptor_receptor_result", "r", blocking=True
, splitratio=[0.38815590219305951, 0.71363867512527479])
apply(Local_Ligand_Directory_38.configure, (), {'paramPanelImmediate': 1})
except:
print "WARNING: failed to restore DirBrowserNE named Local Ligand Directory in network masterNet"
print_exc()
Local_Ligand_Directory_38 = None
#masterNet.run()
masterNet.freeze()
## saving connections for network VinaVSlocal-0.1 ##
if StructureBrowser_0 is not None and PrepareReceptor_2 is not None:
try:
masterNet.connectNodes(
StructureBrowser_0,
PrepareReceptor_2,
"receptor_obj",
"Pdb2pqrWS_CheckFileFormat_value",
blocking=True,
splitratio=[0.2411512852991527, 0.43763306853849476])
except:
print "WARNING: failed to restore connection between StructureBrowser_0 and PrepareReceptor_2 in network masterNet"
Vina_20 = masterNet.nodes[3]
if PrepareReceptor_2 is not None and Vina_20 is not None:
try:
masterNet.connectNodes(
PrepareReceptor_2,
Vina_20,
"PrepareReceptorWS_UpdateReceptor_receptor_prepared_obj",
"PrepareVinaInputs_receptor_obj",
blocking=True,
splitratio=[0.7480148250853722, 0.53664021522471628])
masterNet.addNode(Output_Directory_Browser_53,412,28)
Output_Directory_Browser_53.inputPortByName['directory'].widget.set(r"AutoDockVSlocal_0.1_output", run=False)
apply(Output_Directory_Browser_53.configure, (), {'paramPanelImmediate': 1})
except:
print "WARNING: failed to restore DirBrowserNE named Output Directory Browser in network masterNet"
print_exc()
Output_Directory_Browser_53=None
#masterNet.run()
masterNet.freeze()
## saving connections for network AutoDockVSlocal_0.1 ##
if FilterLigandsNode_37 is not None and VirtualScreening_1 is not None:
try:
masterNet.connectNodes(
FilterLigandsNode_37, VirtualScreening_1, "ligands", "ComputeGrids_GetComputeGridsInputs_ligands", blocking=True
, splitratio=[0.37455111543238506, 0.32420948165762498])
except:
print "WARNING: failed to restore connection between FilterLigandsNode_37 and VirtualScreening_1 in network masterNet"
if PreserveCharges__38 is not None and VirtualScreening_1 is not None:
try:
masterNet.connectNodes(
PreserveCharges__38, VirtualScreening_1, "value_bool", "PrepareReceptor_PrepareReceptorWS_PrepareReceptorOpalService_ws_nbcr_net_C", blocking=True
, splitratio=[0.26471965480569831, 0.73857142767746442])
except:
print "WARNING: failed to restore connection between PreserveCharges__38 and VirtualScreening_1 in network masterNet"
if VirtualScreening_1 is not None and DownloadSaveDir_39 is not None:
try:
masterNet.connectNodes(
VirtualScreening_1, DownloadSaveDir_39, "AutodockVS_GetMainURLFromList_newurl", "url", blocking=True
, splitratio=[0.74808619960402778, 0.23329088335740467])
apply(Output_Directory_28.configure, (), {'paramPanelImmediate': 1})
except:
print "WARNING: failed to restore DirBrowserNE named Output_Directory in network masterNet"
print_exc()
Output_Directory_28 = None
#masterNet.run()
masterNet.freeze()
## saving connections for network VinaVSpublic-0.1 ##
if StructureBrowser_0 is not None and PrepareReceptor_3 is not None:
try:
masterNet.connectNodes(
StructureBrowser_0,
PrepareReceptor_3,
"receptor_obj",
"Pdb2pqrWS_CheckFileFormat_value",
blocking=True,
splitratio=[0.2411512852991527, 0.43763306853849476])
except:
print "WARNING: failed to restore connection between StructureBrowser_0 and PrepareReceptor_3 in network masterNet"
Vina_21 = masterNet.nodes[4]
if PrepareReceptor_3 is not None and Vina_21 is not None:
try:
masterNet.connectNodes(
PrepareReceptor_3,
Vina_21,
"PrepareReceptorWS_UpdateReceptor_receptor_prepared_obj",
"PrepareVinaInputs_receptor_obj",
blocking=True,
splitratio=[0.7480148250853722, 0.53664021522471628])
## configure MacroNode output ports
showConformations_43.shrink()
apply(showConformations_43.configure, (), {'paramPanelImmediate': 1, 'expanded': False})
except:
print "WARNING: failed to restore MacroNode named showConformations in network masterNet"
print_exc()
showConformations_43=None
#masterNet.run()
masterNet.freeze()
## saving connections for network visualization-0.1.2 ##
if AutoDock_VS_Result_Directory_28 is not None and GetReceptors_29 is not None:
try:
masterNet.connectNodes(
AutoDock_VS_Result_Directory_28, GetReceptors_29, "AbsPath_directory", "dir", blocking=True
, splitratio=[0.55778921299744577, 0.56280875000248676])
except:
print "WARNING: failed to restore connection between AutoDock_VS_Result_Directory_28 and GetReceptors_29 in network masterNet"
if GetReceptors_29 is not None and ReceptorList_30 is not None:
try:
masterNet.connectNodes(
GetReceptors_29, ReceptorList_30, "receptors", "valueList", blocking=True
, splitratio=[0.49417000742132478, 0.47069046596772096])
except:
print "WARNING: failed to restore connection between GetReceptors_29 and ReceptorList_30 in network masterNet"
LoadMolecule_31 = masterNet.nodes[3]
if ReceptorList_30 is not None and LoadMolecule_31 is not None:
try:
masterNet.connectNodes(
ReceptorList_30, LoadMolecule_31, "selection", "getMolePath_mol", blocking=True
DownloadDir_12.inputPortByName['url'].unbindWidget()
apply(DownloadDir_12.configure, (), {'paramPanelImmediate': 1})
except:
print "WARNING: failed to restore DownloadSaveDirNode named DownloadDir in network masterNet"
print_exc()
DownloadDir_12=None
#masterNet.run()
masterNet.freeze()
## saving connections for network AMDNBCR-0.2 ##
AMDws_4 = masterNet.nodes[4]
if Config_File_Browser_3 is not None and AMDws_4 is not None:
try:
masterNet.connectNodes(
Config_File_Browser_3, AMDws_4, "filename", "eval_in1", blocking=True
, splitratio=[0.65150653312544904, 0.31836383152848224])
except:
print "WARNING: failed to restore connection between Config_File_Browser_3 and AMDws_4 in network masterNet"
if Input_Directory_Browser_0 is not None and AMDws_4 is not None:
try:
masterNet.connectNodes(
Input_Directory_Browser_0, AMDws_4, "directory", "prepareForZip_in1", blocking=True
, splitratio=[0.46424478122839202, 0.70216128328369165])
except:
print "WARNING: failed to restore connection between Input_Directory_Browser_0 and AMDws_4 in network masterNet"
if NumProcessors_1 is not None and AMDws_4 is not None:
try:
masterNet.connectNodes(
NumProcessors_1, AMDws_4, "string", "NAMD_rocce_ucsd_edu_procs", blocking=True
, splitratio=[0.22553138779262585, 0.39031385694776288])
masterNet.addNode(GPU__25,1254,10)
GPU__25.inputPortByName['button'].widget.set(1, run=False)
apply(GPU__25.configure, (), {'paramPanelImmediate': 1})
except:
print "WARNING: failed to restore CheckButtonNE named GPU? in network masterNet"
print_exc()
GPU__25=None
#masterNet.run()
masterNet.freeze()
## saving connections for network NAMDTeragrid-0.9 ##
if FileWithCommandOrdering_0 is not None and GetOrdering_1 is not None:
try:
masterNet.connectNodes(
FileWithCommandOrdering_0, GetOrdering_1, "filename", "order_file", blocking=True
, splitratio=[0.32774364011444035, 0.21898842608941335])
except:
print "WARNING: failed to restore connection between FileWithCommandOrdering_0 and GetOrdering_1 in network masterNet"
if GetOrdering_1 is not None and iterate_4 is not None:
try:
masterNet.connectNodes(
GetOrdering_1, iterate_4, "order_list", "listToLoopOver", blocking=True
, splitratio=[0.21494363189457535, 0.44944332027843292])
except:
print "WARNING: failed to restore connection between GetOrdering_1 and iterate_4 in network masterNet"
if Input_Directory_Browser_2 is not None and Preprocessing_24 is not None:
try:
masterNet.connectNodes(
Input_Directory_Browser_2, Preprocessing_24, "directory", "indir", blocking=True
, splitratio=[0.33900100507833142, 0.29351862664334766])
apply(GPU__25.configure, (), {'paramPanelImmediate': 1})
except:
print "WARNING: failed to restore CheckButtonNE named GPU? in network masterNet"
print_exc()
GPU__25 = None
#masterNet.run()
masterNet.freeze()
## saving connections for network NAMDTeragrid-0.9 ##
if FileWithCommandOrdering_0 is not None and GetOrdering_1 is not None:
try:
masterNet.connectNodes(
FileWithCommandOrdering_0,
GetOrdering_1,
"filename",
"order_file",
blocking=True,
splitratio=[0.32774364011444035, 0.21898842608941335])
except:
print "WARNING: failed to restore connection between FileWithCommandOrdering_0 and GetOrdering_1 in network masterNet"
if GetOrdering_1 is not None and iterate_4 is not None:
try:
masterNet.connectNodes(
GetOrdering_1,
iterate_4,
"order_list",
"listToLoopOver",
blocking=True,
splitratio=[0.21494363189457535, 0.44944332027843292])
except:
ReadTable_13.inputPortByName['sep'].widget.set(r",", run=False)
ReadTable_13.inputPortByName['datatype'].widget.set(r"float", run=False)
apply(ReadTable_13.configure, (), {'paramPanelImmediate': 1, 'expanded': False})
except:
print "WARNING: failed to restore ReadTable named ReadTable in network masterNet"
print_exc()
ReadTable_13=None
#masterNet.run()
masterNet.freeze()
## saving connections for network Axes ##
if ReadTable_0 is not None and Index_1 is not None:
try:
masterNet.connectNodes(
ReadTable_0, Index_1, "data", "data", blocking=True
, splitratio=[0.55438560191785424, 0.25525704259920123])
except:
print "WARNING: failed to restore connection between ReadTable_0 and Index_1 in network masterNet"
if ReadTable_0 is not None and Index_2 is not None:
try:
masterNet.connectNodes(
ReadTable_0, Index_2, "data", "data", blocking=True
, splitratio=[0.20186193362403329, 0.57002647351380153])
except:
print "WARNING: failed to restore connection between ReadTable_0 and Index_2 in network masterNet"
if Index_4 is not None and Plot_5 is not None:
try:
masterNet.connectNodes(
Index_4, Plot_5, "data", "y", blocking=True
, splitratio=[0.40697243920043913, 0.23394622808726456])
{'paramPanelImmediate': 1})
except:
print "WARNING: failed to restore DirBrowserNE named Output Directory Browser in network masterNet"
print_exc()
Output_Directory_Browser_53 = None
#masterNet.run()
masterNet.freeze()
## saving connections for network AutoDockVSlocal_0.1 ##
if FilterLigandsNode_37 is not None and VirtualScreening_1 is not None:
try:
masterNet.connectNodes(
FilterLigandsNode_37,
VirtualScreening_1,
"ligands",
"ComputeGrids_GetComputeGridsInputs_ligands",
blocking=True,
splitratio=[0.37455111543238506, 0.32420948165762498])
except:
print "WARNING: failed to restore connection between FilterLigandsNode_37 and VirtualScreening_1 in network masterNet"
if PreserveCharges__38 is not None and VirtualScreening_1 is not None:
try:
masterNet.connectNodes(
PreserveCharges__38,
VirtualScreening_1,
"value_bool",
"PrepareReceptor_PrepareReceptorWS_PrepareReceptorOpalService_ws_nbcr_net_C",
blocking=True,
splitratio=[0.26471965480569831, 0.73857142767746442])
except:
})
except:
print "WARNING: failed to restore InputValidation named InputValidation in network masterNet"
print_exc()
InputValidation_42 = None
#masterNet.run()
masterNet.freeze()
## saving connections for network vs-obj6 ##
if PublicServerLigandDB_37 is not None and FilterLigandsNode_38 is not None:
try:
masterNet.connectNodes(
PublicServerLigandDB_37,
FilterLigandsNode_38,
"ligDB",
"ligands",
blocking=True,
splitratio=[0.33190502385589948, 0.21642002589850867])
except:
print "WARNING: failed to restore connection between PublicServerLigandDB_37 and FilterLigandsNode_38 in network masterNet"
if FilterLigandsNode_38 is not None and VirtualScreening_1 is not None:
try:
masterNet.connectNodes(
FilterLigandsNode_38,
VirtualScreening_1,
"ligands",
"ComputeGrids_GetComputeGridsInputs_ligands",
blocking=True,
splitratio=[0.37455111543238506, 0.32420948165762498])
except:
{'paramPanelImmediate': 1})
except:
print "WARNING: failed to restore DirBrowserNE named Output Directory Browser in network masterNet"
print_exc()
Output_Directory_Browser_32 = None
#masterNet.run()
masterNet.freeze()
## saving connections for network AutoGrid_0.1 ##
if PublicServerLigandDB_10 is not None and ComputeGrids_0 is not None:
try:
masterNet.connectNodes(
PublicServerLigandDB_10,
ComputeGrids_0,
"ligDB",
"GetComputeGridsInputs_ligands",
blocking=True,
splitratio=[0.71040241021275885, 0.32432210892569779])
except:
print "WARNING: failed to restore connection between PublicServerLigandDB_10 and ComputeGrids_0 in network masterNet"
if PrepareReceptor_11 is not None and ComputeGrids_0 is not None:
try:
masterNet.connectNodes(
PrepareReceptor_11,
ComputeGrids_0,
"PrepareReceptorWS_UpdateReceptor_receptor_prepared_obj",
"GetComputeGridsInputs_receptor_pdbqt",
blocking=True,
splitratio=[0.37771324748037094, 0.29247414694141388])
except: