homedir=IJ.getDirectory('imagej')
jythondir=os.path.join(homedir,'plugins/Evalulab/')
jythondir=os.path.abspath(jythondir)
sys.path.append(jythondir)
import PoreDetectionTrueColor
reload(PoreDetectionTrueColor)
from PoreDetectionTrueColor import runPoreDetection
import MessageStrings
reload(MessageStrings)
from MessageStrings import Messages
import Utility
reload(Utility)
if __name__ == '__main__':
dlg=DirectoryChooser(Messages.ChooseImageDirectory)
print dlg.getDirectory()
imageList=Utility.getImageListFromDirectory(dlg.getDirectory())
for imageName in imageList:
fullImageName=os.path.join(dlg.getDirectory(), imageName)
image=IJ.openImage(fullImageName)
image.show()
runPoreDetection(image, data, ops, display)
image.close()
# @DatasetService data
# @DisplayService display
# @net.imagej.ops.OpService ops
# @ImageDisplayService ids
from ij import IJ
from ij.plugin import Duplicator
import os
import sys
homedir = IJ.getDirectory('imagej')
jythondir = os.path.join(homedir, 'plugins/Evalulab/')
jythondir = os.path.abspath(jythondir)
sys.path.append(jythondir)
import PoreDetectionTrueColor
reload(PoreDetectionTrueColor)
from PoreDetectionTrueColor import runPoreDetection
if __name__ == '__main__':
inputImp = IJ.getImage()
runPoreDetection(inputImp, data, ops, display)
# @Dataset d
# @DatasetService data
# @DisplayService display
# @net.imagej.ops.OpService ops
# @ImageDisplayService ids
from ij import IJ
from ij.plugin import Duplicator
import os
import sys
homedir=IJ.getDirectory('imagej')
jythondir=os.path.join(homedir,'plugins/Scripts/Evalulab/')
jythondir=os.path.abspath(jythondir)
sys.path.append(jythondir)
import PoreDetectionTrueColor
reload(PoreDetectionTrueColor)
from PoreDetectionTrueColor import runPoreDetection
if __name__ == '__main__':
inputImp = IJ.getImage()
runPoreDetection(inputImp, data, ops, display)
import sys
homedir = IJ.getDirectory('imagej')
jythondir = os.path.join(homedir, 'plugins/Evalulab/')
jythondir = os.path.abspath(jythondir)
sys.path.append(jythondir)
import PoreDetectionTrueColor
reload(PoreDetectionTrueColor)
from PoreDetectionTrueColor import runPoreDetection
import MessageStrings
reload(MessageStrings)
from MessageStrings import Messages
import Utility
reload(Utility)
if __name__ == '__main__':
dlg = DirectoryChooser(Messages.ChooseImageDirectory)
print dlg.getDirectory()
imageList = Utility.getImageListFromDirectory(dlg.getDirectory())
for imageName in imageList:
fullImageName = os.path.join(dlg.getDirectory(), imageName)
image = IJ.openImage(fullImageName)
image.show()
runPoreDetection(image, data, ops, display)
image.close()
