def __init__(self, original=False):
super(ComboEditor, self).__init__()
self.__original = original
self._symbols_index = []
vbox = QVBoxLayout(self)
vbox.setContentsMargins(0, 0, 0, 0)
vbox.setSpacing(0)
self.bar = ActionBar()
vbox.addWidget(self.bar)
self.stacked = QStackedLayout()
vbox.addLayout(self.stacked)
self._main_container = IDE.get_service('main_container')
self.connect(self.bar, SIGNAL("changeCurrent(PyQt_PyObject)"),
self.set_current)
self.connect(self.bar, SIGNAL("runFile(QString)"),
self._run_file)
self.connect(self.bar, SIGNAL("addToProject(QString)"),
self._add_to_project)
self.connect(self.bar, SIGNAL("goToSymbol(int)"),
self._go_to_symbol)
self.connect(self.bar, SIGNAL("reopenTab(QString)"),
lambda path: self._main_container.open_file(path))
self.connect(self.bar, SIGNAL("recentTabsModified()"),
lambda: self._main_container.recent_files_changed())
self.connect(self.bar.code_navigator.btnPrevious, SIGNAL("clicked()"),
lambda: self._navigate_code(False))
self.connect(self.bar.code_navigator.btnNext, SIGNAL("clicked()"),
lambda: self._navigate_code(True))
def __init__(self, parent=None):
super(_MainContainer, self).__init__(parent)
self._parent = parent
self.stack = QStackedLayout(self)
self.stack.setStackingMode(QStackedLayout.StackAll)
self.splitter = dynamic_splitter.DynamicSplitter()
self.setAcceptDrops(True)
self.files_handler = files_handler.FilesHandler(self)
#documentation browser
self.docPage = None
#Code Navigation
self._locator = locator.GoToDefinition()
self.__codeBack = []
self.__codeForward = []
self.__bookmarksFile = ''
self.__bookmarksPos = -1
self.__breakpointsFile = ''
self.__breakpointsPos = -1
self.__operations = {
0: self._navigate_code_jumps,
1: self._navigate_bookmarks,
2: self._navigate_breakpoints}
self.connect(self, SIGNAL("locateFunction(QString, QString, bool)"),
self.locate_function)
IDE.register_service('main_container', self)
#Register signals connections
connections = (
{'target': 'menu_file',
'signal_name': 'openFile(QString)',
'slot': self.open_file},
{'target': 'explorer_container',
'signal_name': 'goToDefinition(int)',
'slot': self.editor_go_to_line},
{'target': 'explorer_container',
'signal_name': 'pep8Activated(bool)',
'slot': self.reset_pep8_warnings},
{'target': 'explorer_container',
'signal_name': 'lintActivated(bool)',
'slot': self.reset_lint_warnings},
)
IDE.register_signals('main_container', connections)
self.selector = main_selector.MainSelector(self)
self.add_widget(self.selector)
if settings.SHOW_START_PAGE:
self.show_start_page()
self.connect(self.selector, SIGNAL("changeCurrent(int)"),
self._change_current_stack)
self.connect(self.selector, SIGNAL("ready()"),
self._selector_ready)
def __init__(self):
super(ComboTabs, self).__init__()
vbox = QVBoxLayout(self)
vbox.setContentsMargins(0, 0, 0, 0)
self.bar = ActionBar()
vbox.addWidget(self.bar)
self.stacked = QStackedLayout()
self.editable = neditable.NEditable('')
self.editor_widget = editor.create_editor(self.editable)
self.stacked.addWidget(self.editor_widget)
vbox.addLayout(self.stacked)
def __init__(self, editor):
super(CodeCompletionWidget,
self).__init__(None, Qt.FramelessWindowHint | Qt.ToolTip)
self._editor = editor
self._revision = 0
self._block = 0
self.stack_layout = QStackedLayout(self)
self.stack_layout.setContentsMargins(0, 0, 0, 0)
self.stack_layout.setSpacing(0)
self.completion_list = QListWidget()
self.completion_list.setMinimumHeight(200)
self.completion_list.setAlternatingRowColors(True)
self._list_index = self.stack_layout.addWidget(self.completion_list)
self._icons = {
'a': resources.IMAGES['attribute'],
'f': resources.IMAGES['function'],
'c': resources.IMAGES['class'],
'm': resources.IMAGES['module']
}
self.cc = code_completion.CodeCompletion()
self._completion_results = {}
self._prefix = ''
self.setVisible(False)
self.source = ''
self._key_operations = {
Qt.Key_Up: self._select_previous_row,
Qt.Key_Down: self._select_next_row,
Qt.Key_PageUp: (lambda: self._select_previous_row(6)),
Qt.Key_PageDown: (lambda: self._select_next_row(6)),
Qt.Key_Right: lambda: None,
Qt.Key_Left: lambda: None,
Qt.Key_Enter: self.pre_key_insert_completion,
Qt.Key_Return: self.pre_key_insert_completion,
Qt.Key_Tab: self.pre_key_insert_completion,
Qt.Key_Space: self.hide_completer,
Qt.Key_Escape: self.hide_completer,
Qt.Key_Backtab: self.hide_completer,
Qt.NoModifier: self.hide_completer,
Qt.ShiftModifier: self.hide_completer,
}
self.desktop = QApplication.instance().desktop()
self.connect(self.completion_list,
SIGNAL("itemClicked(QListWidgetItem*)"),
self.pre_key_insert_completion)
self.connect(self._editor.document(),
SIGNAL("cursorPositionChanged(QTextCursor)"),
self.update_metadata)
def __init__(self, parent=None):
super(CenterView, self).__init__(parent)
layout = QVBoxLayout()
self.setLayout(layout)
self.center = QStackedLayout()
self.camview = widgets.CamView((640, 480), self, draw_logo=True)
self.label_up = QLabel()
self.label_down = QLabel()
self.center.addWidget(self.camview)
layout.addLayout(self.center)
layout.addWidget(self.label_up)
layout.addWidget(self.label_down)
self.adjustSize()
self.setFixedSize(self.sizeHint())
def __init__(self, original=False):
super(ComboEditor, self).__init__(None, Qt.WindowStaysOnTopHint)
self.__original = original
self.__undocked = []
self._symbols_index = []
vbox = QVBoxLayout(self)
vbox.setContentsMargins(0, 0, 0, 0)
vbox.setSpacing(0)
self.bar = ActionBar(main_combo=original)
vbox.addWidget(self.bar)
self.stacked = QStackedLayout()
vbox.addLayout(self.stacked)
self._main_container = IDE.get_service('main_container')
if not self.__original:
self.connect(self._main_container, SIGNAL("fileOpened(QString)"),
self._file_opened_by_main)
self.connect(self.bar.combo, SIGNAL("showComboSelector()"),
lambda: self.emit(SIGNAL("showComboSelector()")))
self.connect(self.bar, SIGNAL("changeCurrent(PyQt_PyObject, int)"),
self._set_current)
self.connect(self.bar, SIGNAL("splitEditor(bool)"), self.split_editor)
self.connect(self.bar, SIGNAL("runFile(QString)"),
self._run_file)
self.connect(self.bar, SIGNAL("closeSplit()"),
lambda: self.emit(SIGNAL("closeSplit(PyQt_PyObject)"), self))
self.connect(self.bar, SIGNAL("addToProject(QString)"),
self._add_to_project)
self.connect(self.bar, SIGNAL("showFileInExplorer(QString)"),
self._show_file_in_explorer)
self.connect(self.bar, SIGNAL("goToSymbol(int)"),
self._go_to_symbol)
self.connect(self.bar, SIGNAL("undockEditor()"),
self.undock_editor)
self.connect(self.bar, SIGNAL("reopenTab(QString)"),
lambda path: self._main_container.open_file(path))
self.connect(self.bar, SIGNAL("recentTabsModified()"),
lambda: self._main_container.recent_files_changed())
self.connect(self.bar.code_navigator.btnPrevious, SIGNAL("clicked()"),
lambda: self._navigate_code(False))
self.connect(self.bar.code_navigator.btnNext, SIGNAL("clicked()"),
lambda: self._navigate_code(True))
def __init__(self, parent=None):
super(Preferences, self).__init__(parent, Qt.Dialog)
self.setWindowTitle(translations.TR_PREFERENCES_TITLE)
self.setMinimumSize(QSize(800, 600))
self.setMaximumSize(QSize(0, 0))
vbox = QVBoxLayout(self)
hbox = QHBoxLayout()
vbox.setContentsMargins(0, 0, 5, 5)
hbox.setContentsMargins(0, 0, 0, 0)
self.tree = QTreeWidget()
self.tree.header().setHidden(True)
self.tree.setSelectionMode(QTreeWidget.SingleSelection)
self.tree.setAnimated(True)
self.tree.header().setHorizontalScrollMode(
QAbstractItemView.ScrollPerPixel)
self.tree.header().setResizeMode(0, QHeaderView.ResizeToContents)
self.tree.header().setStretchLastSection(False)
self.tree.setFixedWidth(200)
self.stacked = QStackedLayout()
hbox.addWidget(self.tree)
hbox.addLayout(self.stacked)
vbox.addLayout(hbox)
hbox_footer = QHBoxLayout()
self._btnSave = QPushButton(translations.TR_SAVE)
self._btnCancel = QPushButton(translations.TR_CANCEL)
hbox_footer.addSpacerItem(QSpacerItem(1, 0, QSizePolicy.Expanding))
hbox_footer.addWidget(self._btnCancel)
hbox_footer.addWidget(self._btnSave)
vbox.addLayout(hbox_footer)
self.connect(self.tree, SIGNAL("itemSelectionChanged()"),
self._change_current)
self.connect(self._btnCancel, SIGNAL("clicked()"), self.close)
self.connect(self._btnSave, SIGNAL("clicked()"),
self._save_preferences)
self.load_ui()
self.tree.setCurrentItem(self.tree.topLevelItem(0))
def __init__(self, parent=None):
super(ProjectTreeColumn, self).__init__(parent,
Qt.WindowStaysOnTopHint)
vbox = QVBoxLayout(self)
vbox.setSizeConstraint(QVBoxLayout.SetDefaultConstraint)
vbox.setContentsMargins(0, 0, 0, 0)
self._buttons = []
self._combo_project = QComboBox()
self._combo_project.setMinimumHeight(30)
self._combo_project.setContextMenuPolicy(Qt.CustomContextMenu)
vbox.addWidget(self._combo_project)
self._projects_area = QStackedLayout()
logger.debug("This is the projects area")
logger.debug(self._projects_area)
vbox.addLayout(self._projects_area)
self.projects = []
self.connect(self._combo_project, SIGNAL("currentIndexChanged(int)"),
self._change_current_project)
self.connect(self._combo_project,
SIGNAL("customContextMenuRequested(const QPoint &)"),
self.context_menu_for_root)
connections = (
{
'target': 'main_container',
'signal_name': 'addToProject(QString)',
'slot': self._add_file_to_project
},
{
'target': 'main_container',
'signal_name': 'showFileInExplorer(QString)',
'slot': self._show_file_in_explorer
},
)
IDE.register_service('projects_explorer', self)
IDE.register_signals('projects_explorer', connections)
ExplorerContainer.register_tab(translations.TR_TAB_PROJECTS, self)
def __init__(self, parent=None, **kwargs):
super(CSVImportDialog, self).__init__(parent, **kwargs)
self.setLayout(QVBoxLayout())
self._options = None
self._path = None
self.__update_pending = False
self._optionswidget = CSVOptionsWidget()
self._optionswidget.format_changed.connect(self._invalidate_preview)
self._stack = QStackedLayout()
self._stack.setContentsMargins(0, 0, 0, 0)
prev_box = QGroupBox("Preview")
prev_box.setLayout(self._stack)
self._preview = QTableView(tabKeyNavigation=False)
self._preview_error = QLabel()
self._stack.addWidget(self._preview)
self._stack.addWidget(self._preview_error)
buttons = QDialogButtonBox(
orientation=Qt.Horizontal,
standardButtons=(QDialogButtonBox.Ok | QDialogButtonBox.Cancel
| QDialogButtonBox.Reset))
buttons.accepted.connect(self.accept)
buttons.rejected.connect(self.reject)
def on_clicked(button):
if buttons.buttonRole(button) == QDialogButtonBox.ResetRole:
self.reset()
buttons.clicked.connect(on_clicked)
self.layout().addWidget(self._optionswidget)
self.layout().addWidget(prev_box)
self.layout().addWidget(buttons)
def __init__(self, parent=None):
super(MusicPreviewWidget, self).__init__(parent)
self._lastbuildtime = 10.0
self._running = None
self._current = None
self._chooserLabel = QLabel()
self._chooser = QComboBox(self, activated=self.selectDocument)
self._log = log.Log()
self._view = popplerview.View()
self._progress = widgets.progressbar.TimedProgressBar()
self._stack = QStackedLayout()
self._top = QWidget()
layout = QVBoxLayout()
self.setLayout(layout)
layout.addWidget(self._top)
layout.addLayout(self._stack)
layout.addWidget(self._progress)
top = QHBoxLayout()
top.setContentsMargins(0, 0, 0, 0)
top.setSpacing(2)
self._top.setLayout(top)
top.addWidget(self._chooserLabel)
top.addWidget(self._chooser)
top.addStretch(1)
self._stack.addWidget(self._log)
self._stack.addWidget(self._view)
self._top.hide()
app.aboutToQuit.connect(self.cleanup)
app.translateUI(self)
def __init__(self, parent=None):
super().__init__(parent)
self.modified = False
box = group_box(self.tr("Default method"),
layout=layout(Qt.Vertical))
self.controlArea.layout().addWidget(box)
bgroup = QButtonGroup()
for i, m in enumerate(self.METHODS[1:-1], 1):
b = radio_button(m.name, checked=i == self.default_method,
group=bgroup, group_id=i)
box.layout().addWidget(b)
self.defbggroup = bgroup
bgroup.buttonClicked[int].connect(self.set_default_method)
box = group_box(self.tr("Individual attribute settings"),
layout=layout(Qt.Horizontal))
self.controlArea.layout().addWidget(box)
self.varview = QtGui.QListView(
selectionMode=QtGui.QListView.ExtendedSelection
)
self.varview.setItemDelegate(DisplayFormatDelegate())
self.varmodel = itemmodels.VariableListModel()
self.varview.setModel(self.varmodel)
self.varview.selectionModel().selectionChanged.connect(
self._on_var_selection_changed
)
self.selection = self.varview.selectionModel()
box.layout().addWidget(self.varview)
method_layout = layout(Qt.Vertical, margins=0)
box.layout().addLayout(method_layout)
methodbox = group_box(layout=layout(Qt.Vertical))
bgroup = QButtonGroup()
for i, m in enumerate(self.METHODS):
b = radio_button(m.name, group=bgroup, group_id=i)
methodbox.layout().addWidget(b)
assert self.METHODS[-1].short == "value"
self.value_stack = value_stack = QStackedLayout()
self.value_combo = QComboBox(activated=self._on_value_changed)
self.value_line = QLineEdit(editingFinished=self._on_value_changed)
self.value_line.setValidator(QDoubleValidator())
value_stack.addWidget(self.value_combo)
value_stack.addWidget(self.value_line)
methodbox.layout().addLayout(value_stack)
bgroup.buttonClicked[int].connect(
self.set_method_for_current_selection
)
reset_button = push_button("Restore all to default",
clicked=self.reset_var_methods,
default=False, autoDefault=False)
method_layout.addWidget(methodbox)
method_layout.addStretch(2)
method_layout.addWidget(reset_button)
self.varmethodbox = methodbox
self.varbgroup = bgroup
commitbox = group_box("Commit", layout=layout(margins=0))
cwidget = commit_widget(
button_text="Commit",
button_default=True,
check_text="Commit on any change",
checked=self.autocommit,
clicked=self.commit
)
def toggle_auto_commit(b):
self.autocommit = b
if self.modified:
self.commit()
cwidget.auto_commit_check.toggled[bool].connect(toggle_auto_commit)
commitbox.layout().addWidget(cwidget)
self.addAction(cwidget.commit_action)
self.controlArea.layout().addWidget(commitbox)
self.data = None
self.fitter = None
def __init__(self, parent=None):
super(_MainContainer, self).__init__(parent)
self._parent = parent
self.stack = QStackedLayout(self)
#Create scrollbar for follow mode
self.scrollBar = QScrollBar(Qt.Vertical, self)
self.scrollBar.setFixedWidth(20)
self.scrollBar.setToolTip(
self.tr('Follow Mode: Scroll the Editors together'))
self.scrollBar.hide()
#hbox.addWidget(self.scrollBar)
self.splitter = dynamic_splitter.DynamicSplitter()
self.tabs = tab_widget.TabWidget(self)
self.setAcceptDrops(True)
self.splitter.addWidget(self.tabs)
self.stack.addWidget(self.splitter)
self.current_split = None
#documentation browser
self.docPage = None
#Code Navigation
self._locator = locator.Locator()
self.__codeBack = []
self.__codeForward = []
self.__bookmarksFile = ''
self.__bookmarksPos = -1
self.__breakpointsFile = ''
self.__breakpointsPos = -1
self.__operations = {
0: self._navigate_code_jumps,
1: self._navigate_bookmarks,
2: self._navigate_breakpoints}
self.connect(self, SIGNAL("locateFunction(QString, QString, bool)"),
self.locate_function)
self.connect(self.tabs, SIGNAL("currentChanged(int)"),
self._current_tab_changed)
self.connect(self.tabs, SIGNAL("splitTab(QTabWidget, int, bool)"),
self._split_this_tab)
self.connect(self.tabs, SIGNAL("reopenTab(QString)"),
self.open_file)
self.connect(self.tabs, SIGNAL("syntaxChanged(QWidget, QString)"),
self._specify_syntax)
self.connect(self.tabs, SIGNAL("allTabsClosed()"),
self._main_without_tabs)
#reload file
self.connect(self.tabs, SIGNAL("reloadFile(QWidget)"),
self.reload_file)
#for Save on Close operation
self.connect(self.tabs, SIGNAL("saveActualEditor()"),
self.save_file)
#Navigate Code
self.connect(self.tabs, SIGNAL("navigateCode(bool, int)"),
self.navigate_code_history)
# Refresh recent tabs
self.connect(self.tabs, SIGNAL("recentTabsModified(QStringList)"),
self._recent_files_changed)
IDE.register_service('main_container', self)
#Register signals connections
connections = (
{'target': 'menu_file',
'signal_name': 'openFile(QString)',
'slot': self.open_file},
{'target': 'explorer_container',
'signal_name': 'goToDefinition(int)',
'slot': self.editor_go_to_line},
{'target': 'explorer_container',
'signal_name': 'projectClosed(QString)',
'slot': self.close_files_from_project},
{'target': 'explorer_container',
'signal_name': 'pep8Activated(bool)',
'slot': self.reset_pep8_warnings},
{'target': 'explorer_container',
'signal_name': 'lintActivated(bool)',
'slot': self.reset_lint_warnings},
)
IDE.register_signals('main_container', connections)
if settings.SHOW_START_PAGE:
self.show_start_page()
def __init__(self):
super().__init__()
self.modified = False
box = group_box(self.tr("Default method"),
layout=layout(Qt.Vertical))
self.controlArea.layout().addWidget(box)
bgroup = QButtonGroup()
for i, m in enumerate(self.METHODS[1:-1], 1):
b = radio_button(m.name, checked=i == self.default_method,
group=bgroup, group_id=i)
box.layout().addWidget(b)
self.defbggroup = bgroup
bgroup.buttonClicked[int].connect(self.set_default_method)
box = group_box(self.tr("Individual attribute settings"),
layout=layout(Qt.Horizontal))
self.controlArea.layout().addWidget(box)
self.varview = QtGui.QListView(
selectionMode=QtGui.QListView.ExtendedSelection
)
self.varview.setItemDelegate(DisplayFormatDelegate())
self.varmodel = itemmodels.VariableListModel()
self.varview.setModel(self.varmodel)
self.varview.selectionModel().selectionChanged.connect(
self._on_var_selection_changed
)
self.selection = self.varview.selectionModel()
box.layout().addWidget(self.varview)
method_layout = layout(Qt.Vertical, margins=0)
box.layout().addLayout(method_layout)
methodbox = group_box(layout=layout(Qt.Vertical))
bgroup = QButtonGroup()
for i, m in enumerate(self.METHODS):
b = radio_button(m.name, group=bgroup, group_id=i)
methodbox.layout().addWidget(b)
assert self.METHODS[-1].short == "value"
self.value_stack = value_stack = QStackedLayout()
self.value_combo = QComboBox(
minimumContentsLength=8,
sizeAdjustPolicy=QComboBox.AdjustToMinimumContentsLength,
activated=self._on_value_changed)
self.value_line = QLineEdit(editingFinished=self._on_value_changed)
self.value_line.setValidator(QDoubleValidator())
value_stack.addWidget(self.value_combo)
value_stack.addWidget(self.value_line)
methodbox.layout().addLayout(value_stack)
bgroup.buttonClicked[int].connect(
self.set_method_for_current_selection
)
reset_button = push_button("Restore all to default",
clicked=self.reset_var_methods,
default=False, autoDefault=False)
method_layout.addWidget(methodbox)
method_layout.addStretch(2)
method_layout.addWidget(reset_button)
self.varmethodbox = methodbox
self.varbgroup = bgroup
box = gui.auto_commit(
self.controlArea, self, "autocommit", "Commit",
orientation=Qt.Horizontal, checkbox_label="Commit on any change")
box.layout().insertSpacing(0, 80)
box.layout().insertWidget(0, self.report_button)
self.data = None
self.learner = None
def __init__(self, parent=None):
super().__init__(parent)
self.selectedDatabase = 0
self.uniqueRows = True
gui.button(gui.widgetBox(self.controlArea, "Cache", addSpace=True),
self, "Clear cache",
tooltip="Clear saved query results",
callback=self.clearCache)
self.martsCombo = gui.comboBox(
self.controlArea, self, "selectedDatabase", "Database",
callback=self.setSelectedMart,
addSpace=True)
self.martsCombo.setMaximumWidth(250)
self.datasetsCombo = gui.comboBox(
self.controlArea, self, "selectedDataset", "Dataset",
callback=self.setSelectedDataset,
addSpace=True)
self.datasetsCombo.setMaximumWidth(250)
gui.rubber(self.controlArea)
box = gui.widgetBox(self.controlArea, "Results")
gui.checkBox(
box, self, "uniqueRows", "Unique results only",
tooltip="Return unique results only.",)
self.commitButton = gui.button(
box, self, "Get Results", callback=self.commit,
tooltip="Query the BioMart server and output the results",
autoDefault=True)
self.commitButton.setEnabled(False)
self.mainWidget = gui.widgetBox(
self.mainArea, orientation=QStackedLayout())
self.mainTab = QTabWidget()
self.mainWidget.layout().addWidget(self.mainTab)
self.attributesConfigurationBox = gui.createTabPage(self.mainTab, "Attributes")
if self.SHOW_FILTERS: # ??
self.filtersConfigurationBox = gui.createTabPage(self.mainTab, "Filters")
self.error(0)
self.setEnabled(False)
self._executor = concurrent.ThreadExecutor(
threadPool=QThreadPool(maxThreadCount=2)
)
self._task = task = concurrent.Task(function=self._get_registry)
task.resultReady.connect(self.setBioMartRegistry)
task.exceptionReady.connect(self._handleException)
self._executor.submit(task)
self._afterInitQueue = []
try:
from Bio import SeqIO
self.hasBiopython = True
except ImportError:
self.warning(100, "Biopython package not found.\nTo retrieve FASTA sequence data from BioMart install Biopython.")
self.hasBiopython = False
