def initUI(self, wlet_pars):
'''
Gets called from the parent DataViewer
'''
self.setWindowTitle('Batch Processing')
self.setGeometry(310, 330, 600, 200)
# from the DataViewer
self.wlet_pars = wlet_pars
main_layout = QGridLayout()
# -- Ridge Analysis Options --
ridge_options = QGroupBox('Ridge Extraction Options')
thresh_label = QLabel("Ridge Threshold:")
thresh_edit = QLineEdit()
thresh_edit.setValidator(posfloatV)
thresh_edit.insert('0')
thresh_edit.setMaximumWidth(60)
thresh_edit.setToolTip(
'Ridge points below that power value will be filtered out ')
self.thresh_edit = thresh_edit
smooth_label = QLabel("Ridge Smoothing:")
smooth_edit = QLineEdit()
smooth_edit.setMaximumWidth(60)
smooth_edit.setSizePolicy(QSizePolicy.Fixed, QSizePolicy.Fixed)
smooth_edit.setValidator(QIntValidator(bottom=3, top=99999999))
tt = 'Savitkzy-Golay window size for smoothing the ridge,\nleave blank for no smoothing'
smooth_edit.setToolTip(tt)
self.smooth_edit = smooth_edit
ridge_options_layout = QGridLayout()
ridge_options_layout.addWidget(thresh_label, 0, 0)
ridge_options_layout.addWidget(thresh_edit, 0, 1)
ridge_options_layout.addWidget(smooth_label, 1, 0)
ridge_options_layout.addWidget(smooth_edit, 1, 1)
ridge_options.setLayout(ridge_options_layout)
# -- Plotting Options --
plotting_options = QGroupBox('Summary Statistics')
self.cb_power_dis = QCheckBox('Ensemble Power Distribution')
self.cb_power_dis.setToolTip(
'Show time-averaged wavelet power of the ensemble')
self.cb_plot_ens_dynamics = QCheckBox('Ensemble Dynamics')
self.cb_plot_ens_dynamics.setToolTip(
'Show period, amplitude and phase distribution over time')
lo = QGridLayout()
lo.addWidget(self.cb_power_dis, 0, 0)
lo.addWidget(self.cb_plot_ens_dynamics, 1, 0)
plotting_options.setLayout(lo)
# -- Save Out Results --
export_options = QGroupBox('Export Results')
export_options.setToolTip('Saves also the summary statistics..')
export_options.setCheckable(True)
export_options.setChecked(False)
self.cb_specs = QCheckBox('Wavelet Spectra')
self.cb_specs.setToolTip(
"Saves the individual wavelet spectra as images (png's)")
self.cb_readout = QCheckBox('Ridge Readouts')
self.cb_readout.setToolTip(
'Saves one data frame per signal to disc as csv')
self.cb_readout_plots = QCheckBox('Ridge Readout Plots')
self.cb_readout_plots.setToolTip(
"Saves the individual readout plots to disc as png's")
self.cb_sorted_powers = QCheckBox('Sorted Average Powers')
self.cb_sorted_powers.setToolTip(
"Saves the time-averaged powers in descending order")
self.cb_save_ensemble_dynamics = QCheckBox('Ensemble Dynamics')
self.cb_save_ensemble_dynamics.setToolTip(
"Saves each period, amplitude and phase summary statistics to a csv table"
)
home = expanduser("~")
OutPath_label = QLabel('Export to:')
self.OutPath_edit = QLineEdit(home)
if self.debug:
self.OutPath_edit.setText(home + '/Desktop/wres')
PathButton = QPushButton('Select Path..')
PathButton.setMaximumWidth(100)
PathButton.clicked.connect(self.select_export_dir)
line1 = QFrame()
line1.setFrameShape(QFrame.HLine)
line1.setFrameShadow(QFrame.Sunken)
line2 = QFrame()
line2.setFrameShape(QFrame.HLine)
line2.setFrameShadow(QFrame.Sunken)
lo = QGridLayout()
lo.setSpacing(1.5)
lo.addWidget(self.cb_specs, 0, 0)
lo.addWidget(self.cb_readout, 1, 0)
lo.addWidget(self.cb_readout_plots, 2, 0)
#lo.addWidget(line1, 3,0)
lo.addWidget(self.cb_sorted_powers, 4, 0)
lo.addWidget(self.cb_save_ensemble_dynamics, 5, 0)
#lo.addWidget(line2, 6,0)
lo.addWidget(PathButton, 7, 0)
lo.addWidget(self.OutPath_edit, 8, 0)
export_options.setLayout(lo)
self.export_options = export_options
# -- Progress and Run --
Nsignals = self.parentDV.df.shape[1]
RunButton = QPushButton(f"Run for {Nsignals} Signals!", self)
RunButton.setStyleSheet("background-color: orange")
RunButton.clicked.connect(self.run_batch)
#RunButton.setMaximumWidth(60)
# the progress bar
self.progress = QProgressBar(self)
self.progress.setRange(0, Nsignals - 1)
#self.progress.setGeometry(0,0, 300, 20)
self.progress.setMinimumWidth(200)
# nsig_label = QLabel(f'{Nsignals} Signals')
process_box = QGroupBox('Processing')
process_box.setSizePolicy(QSizePolicy.Maximum, QSizePolicy.Maximum)
lo = QHBoxLayout()
lo.addWidget(self.progress)
lo.addItem(QSpacerItem(30, 2))
# lo.addStretch(0)
lo.addWidget(RunButton)
lo.addStretch(0)
process_box.setLayout(lo)
# -- main layout --
main_layout.addWidget(ridge_options, 0, 0, 1, 1)
main_layout.addWidget(plotting_options, 1, 0, 1, 1)
main_layout.addWidget(export_options, 0, 1, 2, 1)
main_layout.addWidget(process_box, 2, 0, 1, 2)
# set main layout
self.setLayout(main_layout)
self.show()
def initUI(self, wlet_pars):
"""
Gets called from the parent DataViewer
"""
self.setWindowTitle("Batch Processing")
self.setGeometry(310, 330, 600, 200)
# from the DataViewer
self.wlet_pars = wlet_pars
# for the status bar
main_widget = QWidget()
self.statusBar()
main_layout = QGridLayout()
# -- Ridge Analysis Options --
ridge_options = QGroupBox("Ridge Detection")
thresh_label = QLabel("Ridge Threshold:")
thresh_edit = QLineEdit()
thresh_edit.setValidator(posfloatV)
thresh_edit.insert("0")
thresh_edit.setMaximumWidth(60)
thresh_edit.setStatusTip(
"Ridge points below that power value will be filtered out ")
self.thresh_edit = thresh_edit
smooth_label = QLabel("Ridge Smoothing:")
smooth_edit = QLineEdit()
smooth_edit.setMaximumWidth(60)
smooth_edit.setSizePolicy(QSizePolicy.Fixed, QSizePolicy.Fixed)
smooth_edit.setValidator(QIntValidator(bottom=3, top=99999999))
smooth_edit.setStatusTip(
"""Savitkzy-Golay window size for smoothing the ridge,
leave blank for no smoothing""")
self.smooth_edit = smooth_edit
ridge_options_layout = QGridLayout()
ridge_options_layout.addWidget(thresh_label, 0, 0)
ridge_options_layout.addWidget(thresh_edit, 0, 1)
ridge_options_layout.addWidget(smooth_label, 1, 0)
ridge_options_layout.addWidget(smooth_edit, 1, 1)
ridge_options.setLayout(ridge_options_layout)
# -- Plotting Options --
plotting_options = QGroupBox("Summary Statistics")
self.cb_power_dis = QCheckBox("Ridge Power Distribution")
self.cb_power_dis.setStatusTip(
"Show time-averaged distribution of ridge powers")
self.cb_plot_ens_dynamics = QCheckBox("Ensemble Dynamics")
self.cb_plot_ens_dynamics.setStatusTip(
"Show period, amplitude and phase distribution over time")
self.cb_plot_Fourier_dis = QCheckBox("Fourier Spectra Distribution")
self.cb_plot_Fourier_dis.setStatusTip(
"Ensemble power distribution of the time averaged Wavelet spectra")
lo = QGridLayout()
lo.addWidget(self.cb_plot_ens_dynamics, 0, 0)
lo.addWidget(self.cb_plot_Fourier_dis, 1, 0)
lo.addWidget(self.cb_power_dis, 2, 0)
plotting_options.setLayout(lo)
# -- Save Out Results --
export_options = QGroupBox("Export Results")
export_options.setStatusTip("Creates various figures and csv's")
export_options.setCheckable(True)
export_options.setChecked(False)
self.cb_filtered_sigs = QCheckBox("Filtered Signals")
self.cb_filtered_sigs.setStatusTip(
"Saves detrended and amplitude normalized signals to disc as csv's"
)
self.cb_specs = QCheckBox("Wavelet Spectra")
self.cb_specs.setStatusTip(
"Saves the individual wavelet spectra as images")
self.cb_specs_noridge = QCheckBox("Wavelet Spectra w/o ridges")
self.cb_specs_noridge.setStatusTip(
"Saves the individual wavelet spectra without the ridges as images"
)
self.cb_readout = QCheckBox("Ridge Readouts")
self.cb_readout.setStatusTip(
"Saves one analysis result per signal to disc as csv")
self.cb_readout_plots = QCheckBox("Ridge Readout Plots")
self.cb_readout_plots.setStatusTip(
"Saves the individual readout plots to disc")
self.cb_sorted_powers = QCheckBox("Sorted Average Powers")
self.cb_sorted_powers.setStatusTip(
"Saves the time-averaged ridge powers in descending order")
self.cb_save_ensemble_dynamics = QCheckBox("Ensemble Dynamics")
self.cb_save_ensemble_dynamics.setStatusTip(
"Separately saves period, amplitude, power and phase summary statistics to a csv file"
)
self.cb_save_Fourier_dis = QCheckBox("Fourier Distribution")
self.cb_save_Fourier_dis.setStatusTip(
"Saves median and quartiles of the ensemble Fourier power spectral distribution"
)
# defaults to HOME
self.OutPath_edit = QLineEdit(expanduser("~"))
PathButton = QPushButton("Select Path..")
PathButton.setMaximumWidth(100)
PathButton.clicked.connect(self.select_export_dir)
line1 = QFrame()
line1.setFrameShape(QFrame.HLine)
line1.setFrameShadow(QFrame.Sunken)
line2 = QFrame()
line2.setFrameShape(QFrame.HLine)
line2.setFrameShadow(QFrame.Sunken)
lo = QGridLayout()
lo.setSpacing(1.5)
lo.addWidget(self.cb_filtered_sigs, 0, 0)
lo.addWidget(self.cb_specs, 1, 0)
lo.addWidget(self.cb_specs_noridge, 2, 0)
lo.addWidget(self.cb_readout, 3, 0)
lo.addWidget(self.cb_readout_plots, 4, 0)
# lo.addWidget(line1, 3,0)
lo.addWidget(self.cb_sorted_powers, 5, 0)
lo.addWidget(self.cb_save_ensemble_dynamics, 6, 0)
lo.addWidget(self.cb_save_Fourier_dis, 7, 0)
# lo.addWidget(line2, 6,0)
lo.addWidget(PathButton, 8, 0)
lo.addWidget(self.OutPath_edit, 9, 0)
export_options.setLayout(lo)
self.export_options = export_options
# -- Progress and Run --
Nsignals = self.parentDV.df.shape[1]
RunButton = QPushButton(f"Run for {Nsignals} Signals!", self)
RunButton.setStyleSheet("background-color: orange")
RunButton.clicked.connect(self.run_batch)
# RunButton.setMaximumWidth(60)
# the progress bar
self.progress = QProgressBar(self)
self.progress.setRange(0, Nsignals - 1)
# self.progress.setGeometry(0,0, 300, 20)
self.progress.setMinimumWidth(200)
# nsig_label = QLabel(f'{Nsignals} Signals')
process_box = QGroupBox("Processing")
process_box.setSizePolicy(QSizePolicy.Maximum, QSizePolicy.Maximum)
lo = QHBoxLayout()
lo.addWidget(self.progress)
lo.addItem(QSpacerItem(30, 2))
# lo.addStretch(0)
lo.addWidget(RunButton)
lo.addStretch(0)
process_box.setLayout(lo)
# -- main layout --
main_layout.addWidget(plotting_options, 0, 0, 1, 1)
main_layout.addWidget(ridge_options, 1, 0, 1, 1)
main_layout.addWidget(export_options, 0, 1, 2, 1)
main_layout.addWidget(process_box, 2, 0, 1, 2)
# set main layout
main_widget.setLayout(main_layout)
self.setCentralWidget(main_widget)
self.show()