def setUpClass(cls):
# local FeatureManager server may have already been initialized by
# another unittest
try:
initFeatureManagerConnection()
except ValueError:
pass
data_dir = osp.abspath(osp.join(osp.dirname(__file__), "data"))
classifier_config_file = osp.join(data_dir, "classifier_config.json")
cls.classifier_config = jsmin(open(classifier_config_file).read())
symmetric_clipids = np.loadtxt(osp.join(data_dir, "symmetric_clipids.txt"))
symmetric_bgflags = np.loadtxt(osp.join(data_dir, "symmetric_bgflags.txt"))
# noinspection PyCallingNonCallable
symmetric_dk_mat = np.matrix(np.load(osp.join(data_dir, "symmetric_distance_kernel.npy")))
symmetric_bgclipids = np.array([symmetric_clipids[i] for i, e in enumerate(symmetric_bgflags) if e])
# noinspection PyUnresolvedReferences
#: :type: DistanceKernel
cls.dk_iqr = getFeatureManager().DistanceKernel(
symmetric_clipids, symmetric_clipids, symmetric_dk_mat, symmetric_bgclipids
)
asymmetric_row_ids = np.loadtxt(osp.join(data_dir, "asymmetric_clipids_rows.txt"))
asymmetric_col_ids = np.loadtxt(osp.join(data_dir, "asymmetric_clipids_cols.txt"))
# noinspection PyCallingNonCallable
asymmetric_dk_mat = np.matrix(np.load(osp.join(data_dir, "asymmetric_distance_kernel.npy")))
# noinspection PyUnresolvedReferences
#: :type: DistanceKernel
cls.dk_arc = getFeatureManager().DistanceKernel(asymmetric_row_ids, asymmetric_col_ids, asymmetric_dk_mat)
cls.mdb_info = DatabaseInfo("localhost", 27017, "RSS_Test")
register_mdb_loc(cls.mdb_info.host, cls.mdb_info.port)
def setUpClass(cls):
# local FeatureManager server may have already been initialized by
# another unittest
try:
initFeatureManagerConnection()
except ValueError:
pass
data_dir = osp.abspath(osp.join(osp.dirname(__file__), 'data'))
classifier_config_file = osp.join(data_dir, 'classifier_config.json')
cls.classifier_config = jsmin(open(classifier_config_file).read())
symmetric_clipids = np.loadtxt(
osp.join(data_dir, 'symmetric_clipids.txt'))
symmetric_bgflags = np.loadtxt(
osp.join(data_dir, 'symmetric_bgflags.txt'))
# noinspection PyCallingNonCallable
symmetric_dk_mat = \
np.matrix(np.load(osp.join(data_dir,
'symmetric_distance_kernel.npy')))
symmetric_bgclipids = np.array([
symmetric_clipids[i] for i, e in enumerate(symmetric_bgflags) if e
])
# noinspection PyUnresolvedReferences
#: :type: DistanceKernel
cls.dk_iqr = getFeatureManager().DistanceKernel(
symmetric_clipids, symmetric_clipids, symmetric_dk_mat,
symmetric_bgclipids)
asymmetric_row_ids = np.loadtxt(
osp.join(data_dir, 'asymmetric_clipids_rows.txt'))
asymmetric_col_ids = np.loadtxt(
osp.join(data_dir, 'asymmetric_clipids_cols.txt'))
# noinspection PyCallingNonCallable
asymmetric_dk_mat = \
np.matrix(np.load(osp.join(data_dir,
'asymmetric_distance_kernel.npy')))
# noinspection PyUnresolvedReferences
#: :type: DistanceKernel
cls.dk_arc = getFeatureManager().DistanceKernel(
asymmetric_row_ids, asymmetric_col_ids, asymmetric_dk_mat)
cls.mdb_info = DatabaseInfo('localhost', 27017, 'RSS_Test')
register_mdb_loc(cls.mdb_info.host, cls.mdb_info.port)
def setUp(self):
register_mdb_loc('localhost', 27017)
def setUp(self):
register_mdb_loc("localhost", 27017)
