def __init__(self, parentFrame, parentClass):
SlicerVMTKAdvancedPageSkeleton.__init__(self, parentFrame, parentClass)
self._sourceFiducialList = None
self._targetFiducialList = None
self._currentFiducialList = None
#top frame starts
self._firstRowFrame = slicer.vtkKWFrame()
# source frame starts
self._sourcePointsFrame = slicer.vtkKWFrameWithLabel()
self._addSourcePointButton = slicer.vtkKWPushButton()
self._delSourcePointButton = slicer.vtkKWPushButton()
self._sourcePointsList = slicer.vtkKWListBoxWithScrollbars()
# target frame starts
self._targetPointsFrame = slicer.vtkKWFrameWithLabel()
self._addTargetPointButton = slicer.vtkKWPushButton()
self._delTargetPointButton = slicer.vtkKWPushButton()
self._targetPointsList = slicer.vtkKWListBoxWithScrollbars()
#middle frame starts
self._secondRowFrame = slicer.vtkKWFrame()
#threshold frame starts
self._thresholdFrame = slicer.vtkKWFrameWithLabel()
self._thresholdSlider = slicer.vtkKWExtent()
self._startButton = slicer.vtkKWPushButton()
self._resetButton = slicer.vtkKWPushButton()
def __init__(self,parentFrame,parentClass):
SlicerVMTKAdvancedPageSkeleton.__init__(self,parentFrame,parentClass)
self._sourceFiducialList = None
self._targetFiducialList = None
self._currentFiducialList = None
#top frame starts
self._firstRowFrame = slicer.vtkKWFrame()
# source frame starts
self._sourcePointsFrame = slicer.vtkKWFrameWithLabel()
self._addSourcePointButton = slicer.vtkKWPushButton()
self._delSourcePointButton = slicer.vtkKWPushButton()
self._sourcePointsList = slicer.vtkKWListBoxWithScrollbars()
# target frame starts
self._targetPointsFrame = slicer.vtkKWFrameWithLabel()
self._addTargetPointButton = slicer.vtkKWPushButton()
self._delTargetPointButton = slicer.vtkKWPushButton()
self._targetPointsList = slicer.vtkKWListBoxWithScrollbars()
#middle frame starts
self._secondRowFrame = slicer.vtkKWFrame()
#threshold frame starts
self._thresholdFrame = slicer.vtkKWFrameWithLabel()
self._thresholdSlider = slicer.vtkKWExtent()
self._startButton = slicer.vtkKWPushButton()
self._resetButton = slicer.vtkKWPushButton()
def __init__(self,parentFrame,parentClass):
SlicerVMTKAdvancedPageSkeleton.__init__(self,parentFrame,parentClass)
self._iterationsThumbwheel = slicer.vtkKWThumbWheel()
self._weightsFrame = slicer.vtkKWFrameWithLabel()
self._propagationScalingSpinBox = slicer.vtkKWSpinBoxWithLabel()
self._curvatureScalingSpinBox = slicer.vtkKWSpinBoxWithLabel()
self._advectionScalingSpinBox = slicer.vtkKWSpinBoxWithLabel()
self._startButton = slicer.vtkKWPushButton()
self._resetButton = slicer.vtkKWPushButton()
def __init__(self,parentFrame,parentClass):
SlicerVMTKAdvancedPageSkeleton.__init__(self,parentFrame,parentClass)
self._seedFiducialList = None
self._firstRowFrame = slicer.vtkKWFrame()
self._seedPointsFrame = slicer.vtkKWFrameWithLabel()
self._addSeedPointButton = slicer.vtkKWPushButton()
self._delSeedPointButton = slicer.vtkKWPushButton()
self._seedPointsList = slicer.vtkKWListBoxWithScrollbars()
self._startButton = slicer.vtkKWPushButton()
self._resetButton = slicer.vtkKWPushButton()
def __init__(self, parentFrame, parentClass):
SlicerVMTKAdvancedPageSkeleton.__init__(self, parentFrame, parentClass)
self._firstRowFrame = slicer.vtkKWFrame()
self._isosurfaceLevelFrame = slicer.vtkKWFrameWithLabel()
self._isosurfaceLevelThumbWheel = slicer.vtkKWThumbWheel()
self._startButton = slicer.vtkKWPushButton()
self._resetButton = slicer.vtkKWPushButton()
def __init__(self,parentFrame,parentClass):
SlicerVMTKAdvancedPageSkeleton.__init__(self,parentFrame,parentClass)
self._firstRowFrame = slicer.vtkKWFrame()
self._isosurfaceLevelFrame = slicer.vtkKWFrameWithLabel()
self._isosurfaceLevelThumbWheel = slicer.vtkKWThumbWheel()
self._startButton = slicer.vtkKWPushButton()
self._resetButton = slicer.vtkKWPushButton()
def __init__(self,parentFrame,parentClass):
SlicerVMTKAdvancedPageSkeleton.__init__(self,parentFrame,parentClass)
#top frame starts
self._firstRowFrame = slicer.vtkKWFrame()
#middle frame starts
self._secondRowFrame = slicer.vtkKWFrame()
#threshold frame starts
self._thresholdFrame = slicer.vtkKWFrameWithLabel()
self._thresholdSlider = slicer.vtkKWExtent()
self._startButton = slicer.vtkKWPushButton()
self._resetButton = slicer.vtkKWPushButton()
def __init__(self,parentFrame,parentClass):
SlicerVMTKAdvancedPageSkeleton.__init__(self,parentFrame,parentClass)
self._spinboxFrame = slicer.vtkKWFrameWithLabel()
self._thrFrame = slicer.vtkKWFrameWithLabel()
self._sigmaUnit = slicer.vtkKWRadioButtonSetWithLabel()
self._sigmaMin = slicer.vtkKWSpinBoxWithLabel()
self._sigmaMax = slicer.vtkKWSpinBoxWithLabel()
self._numberOfSigmaSteps = slicer.vtkKWThumbWheel()
self._alpha = slicer.vtkKWSpinBoxWithLabel()
self._alpha2 = slicer.vtkKWSpinBoxWithLabel()
self._startButton = slicer.vtkKWPushButton()
def BuildGUI(self):
SlicerVMTKAdvancedPageSkeleton.BuildGUI(self)
self._firstRowFrame.SetParent(self._parentFrame)
self._firstRowFrame.Create()
self._secondRowFrame.SetParent(self._parentFrame)
self._secondRowFrame.Create()
self._thresholdFrame.SetParent(self._parentFrame)
self._thresholdFrame.Create()
self._thresholdSlider.SetParent(self._thresholdFrame.GetFrame())
self._thresholdSlider.Create()
self._startButton.SetParent(self._parentFrame)
self._startButton.Create()
self._resetButton.SetParent(self._parentFrame)
self._resetButton.Create()
self.UpdateGUIByState()
slicer.TkCall("pack %s -side top -expand y -padx 2 -pady 2 -in %s" % (self._firstRowFrame.GetWidgetName(), self._parentFrame.GetWidgetName()))
slicer.TkCall("pack %s -side top -expand y -padx 2 -pady 2 -in %s" % (self._secondRowFrame.GetWidgetName(), self._parentFrame.GetWidgetName()))
slicer.TkCall("pack %s -side right -expand n -padx 2 -pady 2 -in %s" % (self._startButton.GetWidgetName(), self._parentFrame.GetWidgetName()))
slicer.TkCall("pack %s -side right -expand n -padx 2 -pady 2 -in %s" % (self._resetButton.GetWidgetName(), self._parentFrame.GetWidgetName()))
slicer.TkCall("pack %s -side left -expand y -padx 2 -pady 2 -in %s" % (self._thresholdFrame.GetWidgetName(), self._secondRowFrame.GetWidgetName()))
slicer.TkCall("pack %s -side top -expand n -padx 2 -pady 2" % (self._thresholdSlider.GetWidgetName()))
def AddGUIObservers(self):
SlicerVMTKAdvancedPageSkeleton.AddGUIObservers(self)
self._numberOfSigmaStepsTag = self._parentClass.AddObserverByNumber(
self._numberOfSigmaSteps, vtkKWThumbWheel_ValueChangedEvent)
self._numberOfIterationsTag = self._parentClass.AddObserverByNumber(
self._numberOfIterations, vtkKWThumbWheel_ValueChangedEvent)
self._numberOfDiffusionSubIterationsTag = self._parentClass.AddObserverByNumber(
self._numberOfDiffusionSubIterations,
vtkKWThumbWheel_ValueChangedEvent)
self._sigmaMinTag = self._parentClass.AddObserverByNumber(
self._sigmaMin.GetWidget(), vtkKWSpinBox_ValueChangedEvent)
self._sigmaMaxTag = self._parentClass.AddObserverByNumber(
self._sigmaMax.GetWidget(), vtkKWSpinBox_ValueChangedEvent)
self._alphaTag = self._parentClass.AddObserverByNumber(
self._alpha.GetWidget(), vtkKWSpinBox_ValueChangedEvent)
self._betaTag = self._parentClass.AddObserverByNumber(
self._beta.GetWidget(), vtkKWSpinBox_ValueChangedEvent)
self._gammaTag = self._parentClass.AddObserverByNumber(
self._gamma.GetWidget(), vtkKWSpinBox_ValueChangedEvent)
self._cTag = self._parentClass.AddObserverByNumber(
self._c.GetWidget(), vtkKWSpinBox_ValueChangedEvent)
self._timestepTag = self._parentClass.AddObserverByNumber(
self._timestep.GetWidget(), vtkKWSpinBox_ValueChangedEvent)
self._epsilonTag = self._parentClass.AddObserverByNumber(
self._epsilon.GetWidget(), vtkKWSpinBox_ValueChangedEvent)
self._wstrengthTag = self._parentClass.AddObserverByNumber(
self._wstrength.GetWidget(), vtkKWSpinBox_ValueChangedEvent)
self._sensitivityTag = self._parentClass.AddObserverByNumber(
self._sensitivity.GetWidget(), vtkKWSpinBox_ValueChangedEvent)
self._startButtonTag = self._parentClass.AddObserverByNumber(
self._startButton, vtkKWPushButton_InvokedEvent)
def __init__(self, parentFrame, parentClass):
SlicerVMTKAdvancedPageSkeleton.__init__(self, parentFrame, parentClass)
self._firstRowFrame = slicer.vtkKWFrame()
self._addSourcePointButton = slicer.vtkKWPushButton()
self._addTargetPointButton = slicer.vtkKWPushButton()
self._secondRowFrame = slicer.vtkKWFrame()
self._thresholdFrame = slicer.vtkKWFrameWithLabel()
self._thresholdSlider = slicer.vtkKWExtent()
self._startButton = slicer.vtkKWPushButton()
self._resetButton = slicer.vtkKWPushButton()
self._sourceFiducialList = None
self._targetFiducialList = None
self._state = 0
def UpdateGUI(self):
SlicerVMTKAdvancedPageSkeleton.UpdateGUI(self)
node = self._parentClass.GetScriptedModuleNode()
self._sourceFiducialList = None
self._targetFiducialList = None
if (node.GetParameter("CF_sourceFiducialList") != "None"
and node.GetParameter("CF_sourceFiducialList")):
self._sourceFiducialList = self._parentClass.GetLogic(
).GetMRMLScene().GetNodeByID(
node.GetParameter("CF_sourceFiducialList"))
if (node.GetParameter("CF_targetFiducialList") != "None"
and node.GetParameter("CF_targetFiducialList")):
self._targetFiducialList = self._parentClass.GetLogic(
).GetMRMLScene().GetNodeByID(
node.GetParameter("CF_targetFiducialList"))
self._state = node.GetParameter('CF_state')
self.UpdateGUIByState()
self._parentClass.SetUpdatingOn()
self._thresholdSlider.SetExtent(
node.GetParameter("CF_lowerThreshold"),
node.GetParameter("CF_higherThreshold"), 0, 100, 0, 100)
self._parentClass.SetUpdatingOff()
def UpdateMRML(self):
SlicerVMTKAdvancedPageSkeleton.UpdateMRML(self)
node = self._parentClass.GetScriptedModuleNode()
if node:
node.SetParameter('VED_numberOfSigmaSteps',
self._numberOfSigmaSteps.GetValue())
node.SetParameter('VED_numberOfIterations',
self._numberOfIterations.GetValue())
node.SetParameter('VED_numberOfDiffusionSubIterations',
self._numberOfDiffusionSubIterations.GetValue())
node.SetParameter('VED_sigmaMin',
self._sigmaMin.GetWidget().GetValue())
node.SetParameter('VED_sigmaMax',
self._sigmaMax.GetWidget().GetValue())
node.SetParameter('VED_alpha', self._alpha.GetWidget().GetValue())
node.SetParameter('VED_beta', self._beta.GetWidget().GetValue())
node.SetParameter('VED_gamma', self._gamma.GetWidget().GetValue())
node.SetParameter('VED_c', self._c.GetWidget().GetValue())
node.SetParameter('VED_timestep',
self._timestep.GetWidget().GetValue())
node.SetParameter('VED_epsilon',
self._epsilon.GetWidget().GetValue())
node.SetParameter('VED_wstrength',
self._wstrength.GetWidget().GetValue())
node.SetParameter('VED_sensitivity',
self._sensitivity.GetWidget().GetValue())
def UpdateMRML(self):
SlicerVMTKAdvancedPageSkeleton.UpdateMRML(self)
node = self._parentClass.GetScriptedModuleNode()
node.SetParameter('IS_value',
self._isosurfaceLevelThumbWheel.GetValue())
def DeleteFiducialListsFromScene(self, which):
SlicerVMTKAdvancedPageSkeleton.DeleteFiducialListsFromScene(
self, which)
node = self._parentClass.GetScriptedModuleNode()
if node:
scene = self._parentClass.GetLogic().GetMRMLScene()
if (which != 2):
if self._sourceFiducialList != None:
if scene.IsNodePresent(self._sourceFiducialList):
# node is in scene, now delete
scene.RemoveNode(self._sourceFiducialList)
self._sourceFiducialList = None
if (which != 1):
if self._targetFiducialList != None:
if scene.IsNodePresent(self._targetFiducialList):
# node is in scene, now delete
scene.RemoveNode(self._targetFiducialList)
self._targetFiducialList = None
def ProcessGUIEvents(self,caller,event):
SlicerVMTKAdvancedPageSkeleton.ProcessGUIEvents(self,caller,event)
if caller == self._numberOfSigmaSteps and event == vtkKWThumbWheel_ValueChangedEvent:
self._parentClass.UpdateMRML()
elif caller == self._numberOfIterations and event == vtkKWThumbWheel_ValueChangedEvent:
self._parentClass.UpdateMRML()
elif caller == self._numberOfDiffusionSubIterations and event == vtkKWThumbWheel_ValueChangedEvent:
self._parentClass.UpdateMRML()
elif caller == self._sigmaMin.GetWidget() and event == vtkKWSpinBox_ValueChangedEvent:
self._parentClass.UpdateMRML()
elif caller == self._sigmaMax.GetWidget() and event == vtkKWSpinBox_ValueChangedEvent:
self._parentClass.UpdateMRML()
elif caller == self._alpha.GetWidget() and event == vtkKWSpinBox_ValueChangedEvent:
self._parentClass.UpdateMRML()
elif caller == self._beta.GetWidget() and event == vtkKWSpinBox_ValueChangedEvent:
self._parentClass.UpdateMRML()
elif caller == self._gamma.GetWidget() and event == vtkKWSpinBox_ValueChangedEvent:
self._parentClass.UpdateMRML()
elif caller == self._timestep.GetWidget() and event == vtkKWSpinBox_ValueChangedEvent:
self._parentClass.UpdateMRML()
elif caller == self._epsilon.GetWidget() and event == vtkKWSpinBox_ValueChangedEvent:
self._parentClass.UpdateMRML()
elif caller == self._wstrength.GetWidget() and event == vtkKWSpinBox_ValueChangedEvent:
self._parentClass.UpdateMRML()
elif caller == self._sensitivity.GetWidget() and event == vtkKWSpinBox_ValueChangedEvent:
self._parentClass.UpdateMRML()
elif caller == self._startButton and event == vtkKWPushButton_InvokedEvent:
self.Execute()
self._parentClass.UpdateMRML()
def ProcessGUIEvents(self, caller, event):
SlicerVMTKAdvancedPageSkeleton.ProcessGUIEvents(self, caller, event)
if caller == self._addSourcePointButton and event == vtkKWPushButton_InvokedEvent:
if self._parentClass.GetHelper().GetIsInteractiveMode() == 0:
self.InitAddSourcePoint()
elif self._parentClass.GetHelper().GetIsInteractiveMode() == 1:
self.TeardownAddSourcePoint()
elif caller == self._addTargetPointButton and event == vtkKWPushButton_InvokedEvent:
if self._parentClass.GetHelper().GetIsInteractiveMode() == 0:
self.InitAddTargetPoint()
elif self._parentClass.GetHelper().GetIsInteractiveMode() == 1:
self.TeardownAddTargetPoint()
elif caller == self._startButton and event == vtkKWPushButton_InvokedEvent:
self.Execute()
self._parentClass.UpdateMRML()
elif caller == self._resetButton and event == vtkKWPushButton_InvokedEvent:
self.DeleteFiducialListsFromScene(0)
self.Reset()
self._parentClass.UpdateMRML()
elif caller == self._thresholdSlider and event == vtkKWExtent_StartChangeEvent:
self._parentClass.Threshold(self._thresholdSlider.GetExtent())
elif caller == self._thresholdSlider and event == vtkKWExtent_EndChangeEvent:
self._parentClass.UpdateMRML()
def HandleClickInSliceWindowWithCoordinates(self, coordinates):
SlicerVMTKAdvancedPageSkeleton.HandleClickInSliceWindowWithCoordinates(
self, coordinates)
coordinatesRAS = coordinates
fiducial = self._currentFiducialList.AddFiducialWithXYZ(
coordinatesRAS[0], coordinatesRAS[1], coordinatesRAS[2], 0)
self._currentFiducialList.SetNthFiducialLabelText(
fiducial, self._currentFiducialListLabel + str(fiducial))
self._parentClass.GetHelper().debug("Fiducial Added! Only one needed!")
self._parentClass.GetHelper().SetIsInteractiveMode(0, None)
if self._currentFiducialListLabel == "SP":
# one fiducial added to source points
# disable source point button
#re-change the button appeareance
self._state = 1
self.UpdateGUIByState()
self._parentClass.UpdateMRML()
elif self._currentFiducialListLabel == "TP":
# one fiducial added to target points
# disable target point button
#re-change the button appeareance
self._state = 2
self.UpdateGUIByState()
self._parentClass.UpdateMRML()
def UpdateGUIByPreset(self):
SlicerVMTKAdvancedPageSkeleton.UpdateGUIByPreset(self)
node = self._parentClass._moduleExistingSetsNodeSelector.GetSelected()
if node:
self.UpdateGUIReal(node)
def UpdateGUI(self):
SlicerVMTKAdvancedPageSkeleton.UpdateGUI(self)
node = self._parentClass.GetScriptedModuleNode()
if node:
self.UpdateGUIReal(node)
def AddGUIObservers(self):
SlicerVMTKAdvancedPageSkeleton.AddGUIObservers(self)
self._thresholdSliderTag = self._parentClass.AddObserverByNumber(self._thresholdSlider, vtkKWExtent_EndChangeEvent)
self._thresholdSliderRealtimeTag = self._parentClass.AddObserverByNumber(self._thresholdSlider, vtkKWExtent_StartChangeEvent)
self._startButtonTag = self._parentClass.AddObserverByNumber(self._startButton,vtkKWPushButton_InvokedEvent)
self._resetButtonTag = self._parentClass.AddObserverByNumber(self._resetButton,vtkKWPushButton_InvokedEvent)
def UpdateMRML(self):
SlicerVMTKAdvancedPageSkeleton.UpdateMRML(self)
node = self._parentClass.GetScriptedModuleNode()
extentValues = self._thresholdSlider.GetExtent()
node.SetParameter('TH_lowerThreshold', extentValues[0])
node.SetParameter('TH_higherThreshold', extentValues[1])
def __init__(self,parentFrame,parentClass):
SlicerVMTKAdvancedPageSkeleton.__init__(self,parentFrame,parentClass)
self._firstRowFrame = slicer.vtkKWFrame()
self._addSourcePointButton = slicer.vtkKWPushButton()
self._addTargetPointButton = slicer.vtkKWPushButton()
self._secondRowFrame = slicer.vtkKWFrame()
self._thresholdFrame = slicer.vtkKWFrameWithLabel()
self._thresholdSlider = slicer.vtkKWExtent()
self._startButton = slicer.vtkKWPushButton()
self._resetButton = slicer.vtkKWPushButton()
self._sourceFiducialList = None
self._targetFiducialList = None
self._state = 0
def Reset(self):
SlicerVMTKAdvancedPageSkeleton.Reset(self)
self._sourceFiducialList = None
self._targetFiducialList = None
self._state = 0
self.UpdateGUIByState()
def Reset(self):
SlicerVMTKAdvancedPageSkeleton.Reset(self)
self._numberOfSigmaSteps.SetValue(10)
self._sigmaUnit.GetWidget().GetWidget(0).SetSelectedState(1)
self._sigmaMin.GetWidget().SetValue(1.0)
self._sigmaMax.GetWidget().SetValue(5.0)
self._alpha.GetWidget().SetValue(0.5)
self._alpha2.GetWidget().SetValue(2.0)
def UpdateGUI(self):
SlicerVMTKAdvancedPageSkeleton.UpdateGUI(self)
node = self._parentClass.GetScriptedModuleNode()
self.UpdateGUIByState()
self._parentClass.SetUpdatingOn()
self._thresholdSlider.SetExtent(node.GetParameter("TH_lowerThreshold"),node.GetParameter("TH_higherThreshold"),0,100,0,100)
self._parentClass.SetUpdatingOff()
def RemoveGUIObservers(self):
SlicerVMTKAdvancedPageSkeleton.RemoveGUIObservers(self)
self._parentClass.RemoveObserver(self._thresholdSliderTag)
self._parentClass.RemoveObserver(self._thresholdSliderRealtimeTag)
self._parentClass.RemoveObserver(self._startButtonTag)
self._parentClass.RemoveObserver(self._resetButtonTag)
def Execute(self):
SlicerVMTKAdvancedPageSkeleton.Execute(self)
inVolume = self._parentClass._inVolumeSelector.GetSelected()
outVolume = self._parentClass._outVolumeSelector.GetSelected()
if not inVolume or not outVolume or not self.CheckForVmtkLibrary():
slicer.Application.ErrorMessage(
"No input volume or no output volume found. Aborting VED..\n")
return
else:
sigmaMin = float(self._sigmaMin.GetWidget().GetValue())
sigmaMax = float(self._sigmaMax.GetWidget().GetValue())
numberOfSigmaSteps = int(self._numberOfSigmaSteps.GetValue())
numberOfIterations = int(self._numberOfIterations.GetValue())
numberOfDiffusionSubIterations = int(
self._numberOfDiffusionSubIterations.GetValue())
alpha = float(self._alpha.GetWidget().GetValue())
beta = float(self._beta.GetWidget().GetValue())
gamma = float(self._gamma.GetWidget().GetValue())
c = float(self._c.GetWidget().GetValue())
timestep = float(self._timestep.GetWidget().GetValue())
epsilon = float(self._epsilon.GetWidget().GetValue())
wstrength = float(self._wstrength.GetWidget().GetValue())
sensitivity = float(self._sensitivity.GetWidget().GetValue())
outVolumeImage = self._parentClass._logic.ApplyVED(
inVolume.GetImageData(), sigmaMin, sigmaMax,
numberOfSigmaSteps, alpha, beta, gamma, c, timestep, epsilon,
wstrength, sensitivity, numberOfIterations,
numberOfDiffusionSubIterations)
matrix = slicer.vtkMatrix4x4()
inVolume.GetIJKToRASMatrix(matrix)
outVolume.SetAndObserveImageData(outVolumeImage)
outVolume.SetIJKToRASMatrix(matrix)
displayNode = inVolume.GetDisplayNode()
if displayNode != None:
newDisplayNode = displayNode.NewInstance()
newDisplayNode.Copy(displayNode)
slicer.MRMLScene.AddNodeNoNotify(newDisplayNode)
outVolume.SetAndObserveDisplayNodeID(newDisplayNode.GetID())
newDisplayNode.AutoWindowLevelOff()
newDisplayNode.AutoWindowLevelOn() # renew auto windowlevel
appLogic = slicer.ApplicationLogic
selectionNode = appLogic.GetSelectionNode()
if inVolume.GetLabelMap():
outVolume.SetLabelMap(1)
selectionNode.SetReferenceActiveLabelVolumeID(
outVolume.GetID())
else:
selectionNode.SetReferenceActiveVolumeID(outVolume.GetID())
appLogic.PropagateVolumeSelection()
def __init__(self,parentFrame,parentClass):
SlicerVMTKAdvancedPageSkeleton.__init__(self,parentFrame,parentClass)
self._spinboxFrame = slicer.vtkKWFrameWithLabel()
self._sigmaMin = slicer.vtkKWSpinBoxWithLabel()
self._sigmaMax = slicer.vtkKWSpinBoxWithLabel()
self._numberOfSigmaSteps = slicer.vtkKWThumbWheel()
self._alpha = slicer.vtkKWSpinBoxWithLabel()
self._beta = slicer.vtkKWSpinBoxWithLabel()
self._gamma = slicer.vtkKWSpinBoxWithLabel()
self._timestep = slicer.vtkKWSpinBoxWithLabel()
self._epsilon = slicer.vtkKWSpinBoxWithLabel()
self._wstrength = slicer.vtkKWSpinBoxWithLabel()
self._sensitivity = slicer.vtkKWSpinBoxWithLabel()
self._numberOfIterations = slicer.vtkKWThumbWheel()
self._numberOfDiffusionSubIterations = slicer.vtkKWThumbWheel()
self._startButton = slicer.vtkKWPushButton()
def UpdateGUI(self):
SlicerVMTKAdvancedPageSkeleton.UpdateGUI(self)
node = self._parentClass.GetScriptedModuleNode()
self.UpdateGUIByState()
self._parentClass.SetUpdatingOn()
self._isosurfaceLevelThumbWheel.SetValue(node.GetParameter("IS_value"))
self._parentClass.SetUpdatingOff()
def RemoveGUIObservers(self):
SlicerVMTKAdvancedPageSkeleton.RemoveGUIObservers(self)
self._parentClass.RemoveObserver(self._addSourcePointButtonTag)
self._parentClass.RemoveObserver(self._addTargetPointButtonTag)
self._parentClass.RemoveObserver(self._thresholdSliderTag)
self._parentClass.RemoveObserver(self._startButtonTag)
self._parentClass.RemoveObserver(self._resetButtonTag)
def AddGUIObservers(self):
SlicerVMTKAdvancedPageSkeleton.AddGUIObservers(self)
self._isosurfaceLevelThumbWheelTag = self._parentClass.AddObserverByNumber(
self._isosurfaceLevelThumbWheel, vtkKWThumbWheel_ValueChangedEvent)
self._startButtonTag = self._parentClass.AddObserverByNumber(
self._startButton, vtkKWPushButton_InvokedEvent)
self._resetButtonTag = self._parentClass.AddObserverByNumber(
self._resetButton, vtkKWPushButton_InvokedEvent)
def AddGUIObservers(self):
SlicerVMTKAdvancedPageSkeleton.AddGUIObservers(self)
self._numberOfSigmaStepsTag = self._parentClass.AddObserverByNumber(self._numberOfSigmaSteps,vtkKWThumbWheel_ValueChangedEvent)
self._sigmaUnit1Tag = self._parentClass.AddObserverByNumber(self._sigmaUnit.GetWidget().GetWidget(0),vtkKWRadioButton_SelectedStateChangedEvent)
self._sigmaUnit2Tag = self._parentClass.AddObserverByNumber(self._sigmaUnit.GetWidget().GetWidget(1),vtkKWRadioButton_SelectedStateChangedEvent)
self._sigmaMinTag = self._parentClass.AddObserverByNumber(self._sigmaMin.GetWidget(),vtkKWSpinBox_ValueChangedEvent)
self._sigmaMaxTag = self._parentClass.AddObserverByNumber(self._sigmaMax.GetWidget(),vtkKWSpinBox_ValueChangedEvent)
self._alphaTag = self._parentClass.AddObserverByNumber(self._alpha.GetWidget(),vtkKWSpinBox_ValueChangedEvent)
self._alpha2Tag = self._parentClass.AddObserverByNumber(self._alpha2.GetWidget(),vtkKWSpinBox_ValueChangedEvent)
self._startButtonTag = self._parentClass.AddObserverByNumber(self._startButton,vtkKWPushButton_InvokedEvent)
def UpdateMRML(self):
SlicerVMTKAdvancedPageSkeleton.UpdateMRML(self)
node = self._parentClass.GetScriptedModuleNode()
if node:
node.SetParameter('SATO_numberOfSigmaSteps',self._numberOfSigmaSteps.GetValue())
node.SetParameter('SATO_usePhysicalUnits',self._sigmaUnit.GetWidget().GetWidget(0).GetSelectedState())
node.SetParameter('SATO_sigmaMin',self._sigmaMin.GetWidget().GetValue())
node.SetParameter('SATO_sigmaMax',self._sigmaMax.GetWidget().GetValue())
node.SetParameter('SATO_alpha',self._alpha.GetWidget().GetValue())
node.SetParameter('SATO_alpha2',self._alpha2.GetWidget().GetValue())
def __init__(self,parentFrame,parentClass):
SlicerVMTKAdvancedPageSkeleton.__init__(self,parentFrame,parentClass)
self._welcomeMessage = slicer.vtkKWTextWithHyperlinksWithScrollbars()
