def testExecute(self):
"""
"""
self.run()
# plugin = self.getPlugin()
strExpectedOutput = self.readAndParseFile(
self.getReferenceDataOutputFile())
strObtainedOutput = self.readAndParseFile(
self.m_edObtainedOutputDataFile)
EDVerbose.DEBUG("Checking obtained result...")
xsDataResultReference = XSDataResultNormalize.parseString(
strExpectedOutput)
xsDataResultObtained = XSDataResultNormalize.parseString(
strObtainedOutput)
#EDAssert.strAlmostEqual(xsDataResultReference.marshal(), xsDataResultObtained.marshal(), "Result XML are the same")
npaReference = EDUtilsArray.getArray(xsDataResultReference.output)
npaObtained = EDUtilsArray.getArray(xsDataResultObtained.output)
EDAssert.arraySimilar(npaReference,
npaObtained,
"Arrays are the same",
_fAbsMaxDelta=1e-6)
EDAssert.equal(npaReference.dtype, npaObtained.dtype,
"Datatypes are the same")
def testExecute(self):
"""
"""
self.run()
# plugin = self.getPlugin()
strExpectedOutput = self.readAndParseFile (self.getReferenceDataOutputFile())
strObtainedOutput = self.readAndParseFile (self.m_edObtainedOutputDataFile)
EDVerbose.DEBUG("Checking obtained result...")
xsDataResultReference = XSDataResultNormalize.parseString(strExpectedOutput)
xsDataResultObtained = XSDataResultNormalize.parseString(strObtainedOutput)
#EDAssert.strAlmostEqual(xsDataResultReference.marshal(), xsDataResultObtained.marshal(), "Result XML are the same")
npaReference = EDUtilsArray.xsDataToArray(xsDataResultReference.output.array)
npaObtained = EDUtilsArray.xsDataToArray(xsDataResultObtained.output.array)
EDAssert.arraySimilar(npaReference, npaObtained, "Arrays are the same", _fAbsMaxDelta=1e-6)
EDAssert.equal(npaReference.dtype, npaObtained.dtype, "Datatypes are the same")
def postProcess(self, _edObject=None):
EDPluginExec.postProcess(self)
self.DEBUG("EDPluginExecNormalizeImagev1_1.postProcess")
xsDataResult = XSDataResultNormalize()
if self.strOutputFilename is not None:
self.DEBUG("Writing file %s" % self.strOutputFilename)
edf = fabio.edfimage.edfimage(data=self.npaNormalized, header={})
edf.write(self.strOutputFilename)
xsdo = XSDataImageExt(path=XSDataString(self.strOutputFilename))
elif self.strOutputShared is not None:
self.DEBUG("EDShare --> %s" % self.strOutputShared)
EDShare[ self.strOutputShared] = self.npaNormalized
xsdo = XSDataImageExt(shared=XSDataString(self.strOutputShared))
else:
xsdo = XSDataImageExt(array=EDUtilsArray.arrayToXSData(self.npaNormalized))
xsDataResult.output = xsdo
# Create some output data
self.setDataOutput(xsDataResult)
