def main():
#### Create a response object
response = Response()
#### Create an ActionsParser object
from actions_parser import ActionsParser
actions_parser = ActionsParser()
#### Set a simple list of actions
actions_list = [
"filter(start_node=1, maximum_results=10, minimum_confidence=0.5)",
"return(message=true,store=false)"
]
#### Parse the action_list and print the result
result = actions_parser.parse(actions_list)
response.merge(result)
if result.status != 'OK':
print(response.show(level=Response.DEBUG))
return response
actions = result.data['actions']
#### Read message #2 from the database. This should be the acetaminophen proteins query result message
sys.path.append(
os.path.dirname(os.path.abspath(__file__)) + "/../../UI/Feedback")
from RTXFeedback import RTXFeedback
araxdb = RTXFeedback()
message_dict = araxdb.getMessage(2)
#### The stored message comes back as a dict. Transform it to objects
from ARAX_messenger import ARAXMessenger
message = ARAXMessenger().from_dict(message_dict)
#print(json.dumps(ast.literal_eval(repr(message)),sort_keys=True,indent=2))
#### Create a filter object and use it to apply action[0] from the list
query_graph_info = QueryGraphInfo()
result = query_graph_info.assess(message)
response.merge(result)
if result.status != 'OK':
print(response.show(level=Response.DEBUG))
return response
query_graph_info_dict = {
'n_nodes': query_graph_info.n_nodes,
'n_edges': query_graph_info.n_edges,
'is_bifurcated_graph': query_graph_info.is_bifurcated_graph,
'start_node': query_graph_info.start_node,
'node_info': query_graph_info.node_info,
'edge_info': query_graph_info.edge_info,
'node_order': query_graph_info.node_order,
'edge_order': query_graph_info.edge_order,
'node_type_map': query_graph_info.node_type_map,
'edge_type_map': query_graph_info.edge_type_map,
}
print(
json.dumps(ast.literal_eval(repr(query_graph_info_dict)),
sort_keys=True,
indent=2))
def main():
#### Create a response object
response = Response()
#### Create an ActionsParser object
from actions_parser import ActionsParser
actions_parser = ActionsParser()
#### Set a simple list of actions
actions_list = [
"filter(start_node=1, maximum_results=10, minimum_confidence=0.5)",
"return(message=true,store=false)"
]
#### Parse the action_list and print the result
result = actions_parser.parse(actions_list)
response.merge(result)
if result.status != 'OK':
print(response.show(level=Response.DEBUG))
return response
actions = result.data['actions']
#### Read message #2 from the database. This should be the acetaminophen proteins query result message
sys.path.append(os.path.dirname(os.path.abspath(__file__))+"/../../UI/Feedback")
from RTXFeedback import RTXFeedback
araxdb = RTXFeedback()
message_dict = araxdb.getMessage(2)
#### The stored message comes back as a dict. Transform it to objects
sys.path.append(os.path.dirname(os.path.abspath(__file__))+"/../OpenAPI/python-flask-server/")
from swagger_server.models.message import Message
message = Message().from_dict(message_dict)
#### Create a filter object and use it to apply action[0] from the list
filter = ARAXFilter()
result = filter.apply(message,actions[0]['parameters'])
response.merge(result)
if result.status != 'OK':
print(response.show(level=Response.DEBUG))
return response
response.data = result.data
#### Show the final message
print(response.show(level=Response.DEBUG))
response.data['message_stats'] = { 'n_results': message.n_results, 'id': message.id,
'reasoner_id': message.reasoner_id, 'tool_version': message.tool_version }
print(json.dumps(ast.literal_eval(repr(response.data['parameters'])),sort_keys=True,indent=2))
for result in message.results:
if result.essence is not None:
essence = result.essence
else:
essence = f"{len(result.node_bindings)} node bindings, {len(result.edge_bindings)} edge bindings"
print(f" - {essence}")
print(json.dumps(ast.literal_eval(repr(response.data['message_stats'])),sort_keys=True,indent=2))
def main():
# Note that most of this is just manually doing what ARAXQuery() would normally do for you
response = Response()
from actions_parser import ActionsParser
actions_parser = ActionsParser()
actions_list = [
"create_message",
"add_qnode(id=n00, curie=CHEMBL.COMPOUND:CHEMBL112)", # acetaminophen
"add_qnode(id=n01, type=protein, is_set=true)",
"add_qedge(id=e00, source_id=n00, target_id=n01)",
"expand(edge_id=e00, kp=BTE)",
"return(message=true, store=false)",
]
# Parse the raw action_list into commands and parameters
result = actions_parser.parse(actions_list)
response.merge(result)
if result.status != 'OK':
print(response.show(level=Response.DEBUG))
return response
actions = result.data['actions']
from ARAX_messenger import ARAXMessenger
messenger = ARAXMessenger()
expander = ARAXExpander()
for action in actions:
if action['command'] == 'create_message':
result = messenger.create_message()
message = result.data['message']
response.data = result.data
elif action['command'] == 'add_qnode':
result = messenger.add_qnode(message, action['parameters'])
elif action['command'] == 'add_qedge':
result = messenger.add_qedge(message, action['parameters'])
elif action['command'] == 'expand':
result = expander.apply(message, action['parameters'])
elif action['command'] == 'return':
break
else:
response.error(f"Unrecognized command {action['command']}",
error_code="UnrecognizedCommand")
print(response.show(level=Response.DEBUG))
return response
# Merge down this result and end if we're in an error state
response.merge(result)
if result.status != 'OK':
print(response.show(level=Response.DEBUG))
return response
# Show the final response
# print(json.dumps(ast.literal_eval(repr(message.knowledge_graph)),sort_keys=True,indent=2))
print(response.show(level=Response.DEBUG))
def main():
### Note that most of this is just manually doing what ARAXQuery() would normally do for you
#### Create a response object
response = Response()
#### Create an ActionsParser object
from actions_parser import ActionsParser
actions_parser = ActionsParser()
#### Set a simple list of actions
# actions_list = [
# "overlay(compute_confidence_scores=true)",
# "return(message=true,store=false)"
# ]
actions_list = [
#"filter_kg(action=remove_edges_by_type, edge_type=physically_interacts_with, remove_connected_nodes=false)",
#"filter_kg(action=remove_edges_by_type, edge_type=physically_interacts_with, remove_connected_nodes=something)",
#"filter(action=remove_nodes_by_type, node_type=protein)",
#"overlay(action=compute_ngd)",
#"filter(action=remove_edges_by_attribute, edge_attribute=ngd, threshold=.63, direction=below, remove_connected_nodes=t)",
#"filter(action=remove_edges_by_attribute, edge_attribute=ngd, threshold=.6, remove_connected_nodes=False)",
"filter(action=remove_orphaned_nodes)",
"return(message=true,store=false)"
]
#### Parse the action_list and print the result
result = actions_parser.parse(actions_list)
response.merge(result)
if result.status != 'OK':
print(response.show(level=Response.DEBUG))
return response
actions = result.data['actions']
#### Read message #2 from the database. This should be the acetaminophen proteins query result message
sys.path.append(
os.path.dirname(os.path.abspath(__file__)) + "/../../UI/Feedback")
from RTXFeedback import RTXFeedback
araxdb = RTXFeedback()
#message_dict = araxdb.getMessage(2) # acetaminophen2proteins graph
# message_dict = araxdb.getMessage(13) # ibuprofen -> proteins -> disease # work computer
# message_dict = araxdb.getMessage(14) # pleuropneumonia -> phenotypic_feature # work computer
# message_dict = araxdb.getMessage(16) # atherosclerosis -> phenotypic_feature # work computer
# message_dict = araxdb.getMessage(5) # atherosclerosis -> phenotypic_feature # home computer
# message_dict = araxdb.getMessage(10)
message_dict = araxdb.getMessage(40)
#### The stored message comes back as a dict. Transform it to objects
from ARAX_messenger import ARAXMessenger
message = ARAXMessenger().from_dict(message_dict)
# print(json.dumps(ast.literal_eval(repr(message)),sort_keys=True,indent=2))
#### Create an overlay object and use it to apply action[0] from the list
#filterkg = ARAXFilterKG()
#result = filterkg.apply(message, actions[0]['parameters'])
#response.merge(result)
# Apply overlay so you get an edge attribute to work with, then apply the filter
#from ARAX_overlay import ARAXOverlay
#overlay = ARAXOverlay()
#result = overlay.apply(message, actions[0]['parameters'])
#response.merge(result)
# then apply the filter
filterkg = ARAXFilterKG()
result = filterkg.apply(message, actions[0]['parameters'])
response.merge(result)
# if result.status != 'OK':
# print(response.show(level=Response.DEBUG))
# return response
# response.data = result.data
#### If successful, show the result
# print(response.show(level=Response.DEBUG))
# response.data['message_stats'] = { 'n_results': message.n_results, 'id': message.id,
# 'reasoner_id': message.reasoner_id, 'tool_version': message.tool_version }
# response.data['message_stats']['confidence_scores'] = []
# for result in message.results:
# response.data['message_stats']['confidence_scores'].append(result.confidence)
# print(json.dumps(ast.literal_eval(repr(response.data['parameters'])),sort_keys=True,indent=2))
# print(json.dumps(ast.literal_eval(repr(response.data['message_stats'])),sort_keys=True,indent=2))
# a comment on the end so you can better see the network on github
# look at the response
# print(response.show(level=Response.DEBUG))
# print(response.show())
# print("Still executed")
# look at the edges
# print(json.dumps(ast.literal_eval(repr(message.knowledge_graph.edges)),sort_keys=True,indent=2))
# print(json.dumps(ast.literal_eval(repr(message.knowledge_graph.nodes)), sort_keys=True, indent=2))
# print(json.dumps(ast.literal_eval(repr(message)), sort_keys=True, indent=2))
# print(response.show(level=Response.DEBUG))
# just print off the values
# print(json.dumps(ast.literal_eval(repr(message.knowledge_graph.edges)), sort_keys=True, indent=2))
# for edge in message.knowledge_graph.edges:
# if hasattr(edge, 'edge_attributes') and edge.edge_attributes and len(edge.edge_attributes) >= 1:
# print(edge.edge_attributes.pop().value)
print(
json.dumps(ast.literal_eval(repr(message.knowledge_graph.edges)),
sort_keys=True,
indent=2))
print(response.show(level=Response.DEBUG))
vals = []
for node in message.knowledge_graph.nodes:
print(node.id)
print(len(message.knowledge_graph.nodes))
for edge in message.knowledge_graph.edges:
if hasattr(edge, 'edge_attributes') and edge.edge_attributes and len(
edge.edge_attributes) >= 1:
vals.append(edge.edge_attributes.pop().value)
print(sorted(vals))
def processExternalPreviousMessageProcessingPlan(self, inputEnvelope):
debug = 1
if debug:
eprint(
"DEBUG: Entering processExternalPreviousMessageProcessingPlan")
messages = []
finalMessage = None
finalMessage_id = None
query = None
#### Pull out the main processing plan envelope
envelope = PreviousMessageProcessingPlan.from_dict(
inputEnvelope["previous_message_processing_plan"])
#### If there are URIs provided, try to load them
if envelope.previous_message_uris is not None:
if debug: eprint("DEBUG: Got previous_message_uris")
for uri in envelope.previous_message_uris:
if debug: eprint("DEBUG: messageURI=" + uri)
matchResult = re.match(
r'http[s]://arax.ncats.io/.*api/rtx/.+/message/(\d+)', uri,
re.M | re.I)
if matchResult:
message_id = matchResult.group(1)
if debug:
eprint(
"DEBUG: Found local ARAX identifier corresponding to message_id "
+ message_id)
if debug: eprint("DEBUG: Loading message_id " + message_id)
message = self.getMessage(message_id)
#eprint(type(message))
if not isinstance(message, tuple):
if debug:
eprint("DEBUG: Original question was: " +
message["original_question"])
messages.append(message)
finalMessage_id = message_id
query = {
"query_type_id": message["query_type_id"],
"restated_question": message["restated_question"],
"terms": message["terms"]
}
else:
eprint("ERROR: Unable to load message_id " +
message_id)
return ({
"status":
404,
"title":
"Message not found",
"detail":
"There is no local message corresponding to message_id="
+ str(message_id),
"type":
"about:blank"
}, 404)
#### If there are one or more previous_messages embedded in the POST, process them
if envelope.previous_messages is not None:
if debug: eprint("DEBUG: Got previous_messages")
for uploadedMessage in envelope.previous_messages:
if debug:
eprint("DEBUG: uploadedMessage is a " +
str(uploadedMessage.__class__))
if str(uploadedMessage.__class__
) == "<class 'swagger_server.models.message.Message'>":
if uploadedMessage.results:
message = ast.literal_eval(repr(uploadedMessage))
messages.append(message)
if message["terms"] is None:
message["terms"] = {"dummyTerm": "giraffe"}
if message["query_type_id"] is None:
message["query_type_id"] = "UnknownQ"
if message["restated_question"] is None:
message["restated_question"] = "What is life?"
if message["original_question"] is None:
message["original_question"] = "what is life"
query = {
"query_type_id": message["query_type_id"],
"restated_question": message["restated_question"],
"original_question": message["original_question"],
"terms": message["terms"]
}
else:
eprint(
"Uploaded message does not contain a results. May be the wrong format"
)
return ({
"status": 404,
"title": "Bad uploaded Message",
"detail":
"There is no results in the uploaded Message object=",
"type": "about:blank"
}, 404)
else:
eprint(
"Uploaded message is not of type Message. It is of type"
+ str(uploadedMessage.__class__))
return ({
"status":
404,
"title":
"Bad uploaded Message",
"detail":
"Uploaded message is not of type Message. It is of type"
+ str(uploadedMessage.__class__),
"type":
"about:blank"
}, 404)
#### Take different actions based on the number of messages we now have in hand
n_messages = len(messages)
if n_messages == 0:
return ({
"status": 499,
"title": "No Messages",
"detail": "Did not get any useful Message objects",
"type": "about:blank"
}, 499)
elif n_messages == 1:
finalMessage = messages[0]
else:
finalMessage = TxMessage.from_dict(messages[0])
counter = 1
while counter < n_messages:
messageToMerge = TxMessage.from_dict(messages[counter])
if messageToMerge.reasoner_id is None:
messageToMerge.reasoner_id = "Unknown"
if messageToMerge.reasoner_id != "ARAX":
messageToMerge = self.fix_message(
query, messageToMerge, messageToMerge.reasoner_id)
finalMessage = self.merge_message(finalMessage, messageToMerge)
counter += 1
finalMessage = ast.literal_eval(repr(finalMessage))
#return( { "status": 498, "title": "Multiple Messages", "detail": "I have multiple messages. Merging code awaits!", "type": "about:blank" }, 498)
#### Examine the options that were provided and act accordingly
optionsDict = {}
if envelope.options:
if debug: eprint("DEBUG: Got options")
for option in envelope.options:
if debug: eprint("DEBUG: option=" + option)
optionsDict[option] = 1
#### If there are processing_actions, then fulfill those
processing_actions = []
if envelope.processing_actions:
if debug: eprint("DEBUG: Found processing_actions")
actions_parser = ActionsParser()
result = actions_parser.parse(envelope.processing_actions)
if result.error_code != 'OK':
eprint(result)
raise ()
#### Message suffers from a dual life as a dict and an object. above we seem to treat it as a dict. Fix that. FIXME
#### Below we start treating it as and object. This should be the way forward.
#### This is not a good place to do this, but may need to convert here
from ARAX_messenger import ARAXMessenger
finalMessage = ARAXMessenger().from_dict(finalMessage)
#### Process each action in order
action_stats = {}
actions = result.data['actions']
for action in actions:
if debug:
eprint(
f"DEBUG: Considering action '{action['command']}' with parameters {action['parameters']}"
)
#### If we encounter a return, then this is the end of the line
if action['command'] == 'return':
action_stats['return_action'] = action
break
if action['command'] == 'filter':
filter = ARAXFilter()
result = filter.apply(finalMessage, action['parameters'])
if result.error_code != 'OK':
response = result
break
else:
if debug:
eprint(
f"DEBUG: Action '{action['command']}' is not known"
)
#### At the end, process the explicit return() action, or implicitly perform one
return_action = {
'command': 'return',
'parameters': {
'message': 'false',
'store': 'false'
}
}
if action is not None and action['command'] == 'return':
return_action = action
#### If an explicit one left out some parameters, set the defaults
if 'store' not in return_action['parameters']:
return_action['parameters']['store'] == 'false'
if 'message' not in return_action['parameters']:
return_action['parameters']['message'] == 'false'
#if "AnnotateDrugs" in optionsDict:
# if debug: eprint("DEBUG: Annotating drugs")
# annotate_std_results(finalMessage)
if return_action['parameters']['store'] == 'true':
if debug: eprint("DEBUG: Storing resulting Message")
finalMessage_id = self.addNewMessage(
TxMessage.from_dict(finalMessage), query)
#### If requesting a full redirect to the resulting message display. This doesn't really work I don't think
#if "RedirectToMessage" in optionsDict:
# #redirect("https://arax.ncats.io/api/rtx/v1/message/"+str(finalMessage_id), code=302)
# #return( { "status": 302, "redirect": "https://arax.ncats.io/api/rtx/v1/message/"+str(finalMessage_id) }, 302)
# return( "Location: https://arax.ncats.io/api/rtx/v1/message/"+str(finalMessage_id), 302)
#### If asking for the full message back
if return_action['parameters']['message'] == 'true':
return (finalMessage)
#### Else just the id is returned
else:
#return( { "status": 200, "message_id": str(finalMessage_id), "n_results": finalMessage['n_results'], "url": "https://arax.ncats.io/api/rtx/v1/message/"+str(finalMessage_id) }, 200)
return ({
"status":
200,
"message_id":
str(finalMessage_id),
"n_results":
finalMessage.n_results,
"url":
"https://arax.ncats.io/api/rtx/v1/message/" +
str(finalMessage_id)
}, 200)
def main():
print("start ARAX_overlay")
#### Note that most of this is just manually doing what ARAXQuery() would normally do for you
#### Create a response object
response = Response()
#### Create an ActionsParser object
from actions_parser import ActionsParser
actions_parser = ActionsParser()
#### Set a simple list of actions
#actions_list = [
# "overlay(compute_confidence_scores=true)",
# "return(message=true,store=false)"
#]
actions_list = [
#"overlay(action=compute_ngd)",
#"overlay(action=compute_ngd, virtual_edge_type=NGD1, source_qnode_id=n00, target_qnode_id=n01)",
#"overlay(action=overlay_clinical_info, paired_concept_frequency=true)",
# "overlay(action=overlay_clinical_info, paired_concept_frequency=true, virtual_edge_type=P1, source_qnode_id=n00, target_qnode_id=n01)",
#"overlay(action=compute_jaccard, start_node_id=n00, intermediate_node_id=n01, end_node_id=n02, virtual_edge_type=J1)",
#"overlay(action=add_node_pmids)",
#"overlay(action=overlay_clinical_info, observed_expected_ratio=true)",
#"overlay(action=overlay_clinical_info, paired_concept_frequency=true, virtual_edge_type=P1, source_qnode_id=n00, target_qnode_id=n01)",
"overlay(action=predict_drug_treats_disease, source_qnode_id=n01, target_qnode_id=n00, virtual_edge_type=P1)",
"return(message=true,store=false)"
]
#### Parse the action_list and print the result
result = actions_parser.parse(actions_list)
response.merge(result)
if result.status != 'OK':
print(response.show(level=Response.DEBUG))
return response
actions = result.data['actions']
#### Read message #2 from the database. This should be the acetaminophen proteins query result message
sys.path.append(
os.path.dirname(os.path.abspath(__file__)) + "/../../UI/Feedback")
from RTXFeedback import RTXFeedback
araxdb = RTXFeedback()
#message_dict = araxdb.getMessage(2) # acetaminophen2proteins graph
# message_dict = araxdb.getMessage(13) # ibuprofen -> proteins -> disease # work computer
#message_dict = araxdb.getMessage(14) # pleuropneumonia -> phenotypic_feature # work computer
#message_dict = araxdb.getMessage(16) # atherosclerosis -> phenotypic_feature # work computer
#message_dict = araxdb.getMessage(5) # atherosclerosis -> phenotypic_feature # home computer
#message_dict = araxdb.getMessage(10)
#message_dict = araxdb.getMessage(36) # test COHD obs/exp, via ARAX_query.py 16
#message_dict = araxdb.getMessage(39) # ngd virtual edge test
message_dict = araxdb.getMessage(1)
#### The stored message comes back as a dict. Transform it to objects
from ARAX_messenger import ARAXMessenger
message = ARAXMessenger().from_dict(message_dict)
#print(json.dumps(ast.literal_eval(repr(message)),sort_keys=True,indent=2))
#### Create an overlay object and use it to apply action[0] from the list
print("Applying action")
overlay = ARAXOverlay()
result = overlay.apply(message, actions[0]['parameters'])
response.merge(result)
print("Finished applying action")
#if result.status != 'OK':
# print(response.show(level=Response.DEBUG))
# return response
#response.data = result.data
#### If successful, show the result
#print(response.show(level=Response.DEBUG))
#response.data['message_stats'] = { 'n_results': message.n_results, 'id': message.id,
# 'reasoner_id': message.reasoner_id, 'tool_version': message.tool_version }
#response.data['message_stats']['confidence_scores'] = []
#for result in message.results:
# response.data['message_stats']['confidence_scores'].append(result.confidence)
#print(json.dumps(ast.literal_eval(repr(response.data['parameters'])),sort_keys=True,indent=2))
#print(json.dumps(ast.literal_eval(repr(response.data['message_stats'])),sort_keys=True,indent=2))
# a comment on the end so you can better see the network on github
# look at the response
#print(response.show(level=Response.DEBUG))
#print(response.show())
#print("Still executed")
# look at the edges
#print(json.dumps(ast.literal_eval(repr(message.knowledge_graph.edges)),sort_keys=True,indent=2))
#print(json.dumps(ast.literal_eval(repr(message.knowledge_graph.nodes)), sort_keys=True, indent=2))
#print(json.dumps(ast.literal_eval(repr(message)), sort_keys=True, indent=2))
#print(response.show(level=Response.DEBUG))
# just print off the values
#print(json.dumps(ast.literal_eval(repr(message.knowledge_graph.edges)), sort_keys=True, indent=2))
#for edge in message.knowledge_graph.edges:
# if hasattr(edge, 'edge_attributes') and edge.edge_attributes and len(edge.edge_attributes) >= 1:
# print(edge.edge_attributes.pop().value)
#print(f"Message: {json.dumps(ast.literal_eval(repr(message)), sort_keys=True, indent=2)}")
#print(message)
print(
f"KG edges: {json.dumps(ast.literal_eval(repr(message.knowledge_graph.edges)), sort_keys=True, indent=2)}"
)
#print(response.show(level=Response.DEBUG))
print("Yet you still got here")
def main():
#### Create a response object
response = ARAXResponse()
#### Create an ActionsParser object
from actions_parser import ActionsParser
actions_parser = ActionsParser()
#### Set a simple list of actions
actions_list = [
"filter(start_node=1, maximum_results=10, minimum_confidence=0.5)",
"return(message=true,store=false)"
]
#### Parse the action_list and print the result
result = actions_parser.parse(actions_list)
response.merge(result)
if result.status != 'OK':
print(response.show(level=ARAXResponse.DEBUG))
return response
actions = result.data['actions']
#### Read message #2 from the database. This should be the acetaminophen proteins query result message
sys.path.append(
os.path.dirname(os.path.abspath(__file__)) + "/../../UI/Feedback")
from RTXFeedback import RTXFeedback
araxdb = RTXFeedback()
message_dict = araxdb.getMessage(2)
#### The stored message comes back as a dict. Transform it to objects
from ARAX_messenger import ARAXMessenger
message = ARAXMessenger().from_dict(message_dict)
#### Asses some information about the QueryGraph
query_graph_info = QueryGraphInfo()
result = query_graph_info.assess(message)
response.merge(result)
if result.status != 'OK':
print(response.show(level=ARAXResponse.DEBUG))
return response
#print(json.dumps(ast.literal_eval(repr(query_graph_info.node_order)),sort_keys=True,indent=2))
#### Assess some information about the KnowledgeGraph
knowledge_graph_info = KnowledgeGraphInfo()
result = knowledge_graph_info.check_for_query_graph_tags(
message, query_graph_info)
response.merge(result)
if result.status != 'OK':
print(response.show(level=ARAXResponse.DEBUG))
return response
#### Try to add query_graph_ids to the KnowledgeGraph
result = knowledge_graph_info.add_query_graph_tags(message,
query_graph_info)
response.merge(result)
if result.status != 'OK':
print(response.show(level=ARAXResponse.DEBUG))
return response
#### Reassess some information about the KnowledgeGraph
result = knowledge_graph_info.check_for_query_graph_tags(
message, query_graph_info)
response.merge(result)
if result.status != 'OK':
print(response.show(level=ARAXResponse.DEBUG))
return response
print(response.show(level=ARAXResponse.DEBUG))
tmp = {
'query_graph_id_node_status':
knowledge_graph_info.query_graph_id_node_status,
'query_graph_id_edge_status':
knowledge_graph_info.query_graph_id_edge_status,
'n_nodes': knowledge_graph_info.n_nodes,
'n_edges': knowledge_graph_info.n_edges
}
#print(json.dumps(message.to_dict(),sort_keys=True,indent=2))
print(json.dumps(ast.literal_eval(repr(tmp)), sort_keys=True, indent=2))