def test_get_studies_from_list(self):
mock_open.return_value = FileNotFoundError
actual, message = get_studies(self.list_of_studies)
expected = self.list_of_studies
assert isinstance(actual, object)
self.assertEqual(expected, actual)
self.assertEqual("Studies extracted from list\n", message)
def test_get_studies_integer(self):
mock_open.return_value = FileNotFoundError
actual, message = get_studies(47)
self.assertEqual([], actual)
self.assertEqual((type(
47
), "is not a valid input type. Nothing will be uploaded. Please enter path to a file or a list of study names\n"
), message)
def test_file_and_fail(self):
mock_open.return_value = FileNotFoundError
actual, message = get_studies(self.prok_path)
#archive_project.GetStudies.open.assert_called_once_with(self.prok_path)
expected = list(self.prok_path.split(','))
self.assertEqual(expected, actual)
self.assertEqual(
"This file can't be found. Attempt will be made to interpret as a list. If this is not intended then please enter a valid path to a file or a list of study names.\n",
message)
def test_get_studies_from_file(self):
with patch("archive_project.GetStudies.open".format(__name__),
mock_open(read_data="data1\ndata2\ndata3"),
create=True) as _file:
actual, message = get_studies(self.prok_path)
_file.assert_called_once_with(self.prok_path)
expected = ['data1', 'data2', 'data3']
self.assertEqual(expected, actual)
self.assertEqual("Studies extracted from file\n", message)
def test_get_studies_empty_list(self):
mock_open.return_value = FileNotFoundError
actual, message = get_studies([])
self.assertEqual([], actual)
self.assertEqual("Studies extracted from list\n", message)