def test_get_file_size(self):
"""Test the get_file_size method"""
file_upload = FileUpload(self.request)
file = open(self.request.session['upload_directory'] + '/people.tsv')
result = file_upload.get_file_size(file)
assert result == 174
def test_filepath(self):
"""Test the filepath method"""
file_upload = FileUpload(self.request)
result = file_upload.filepath('people.tsv')
assert result == '/tmp/askomics/upload/jdoe/people.tsv'
def test_get_file_size(self):
"""Test the get_file_size method"""
file_upload = FileUpload(self.request)
file = open(self.request.session['upload_directory'] + '/people.tsv')
result = file_upload.get_file_size(file)
assert result == 174
def test_filepath(self):
"""Test the filepath method"""
file_upload = FileUpload(self.request)
result = file_upload.filepath('people.tsv')
expected_path = self.settings["askomics.files_dir"] + '/jdoe/upload/people.tsv'
assert result == expected_path
def test_upload(self):
"""Test the upload method"""
file_upload = FileUpload(self.request)
result = file_upload.upload()
assert result == {
'html':
'<div>\n\n <p>Supported file: CSV, TSV, GFF, TTL</p>\n\n <p><mark>the maximum file upload size is ___SIZE_UPLOAD____</mark></p>\n\n <hr/>\n\n <!-- The file upload form used as target for the file upload widget -->\n\n <form id="fileupload" action="/up/" method="POST" enctype="multipart/form-data">\n\n <!-- Redirect browsers with JavaScript disabled to the origin page -->\n\n <!-- <noscript><input type="hidden" name="redirect" value="https://bipaa.genouest.org/askomics"></noscript> -->\n\n <!-- The fileupload-buttonbar contains buttons to add/delete files and start/cancel the upload -->\n\n <div class="row fileupload-buttonbar">\n\n <div class="col-lg-7">\n\n <div class="btn-group" role="group" aria-label="...">\n\n <span id="add_files_upload" class="btn btn-default fileinput-button">\n\n <i class="fa fa-plus text-success" aria-hidden="true"></i> Add files ...\n\n <input type="file" name="files[]" multiple>\n\n </span>\n\n <button id=\'start_upload\' type="button" class="btn btn-default start"><i class="fa fa-arrow-circle-o-up text-default" aria-hidden="true"></i> Start upload</button>\n\n <button id=\'cancel_upload\' type="button" class="btn btn-default cancel"><i class="fa fa-ban text-warning" aria-hidden="true"></i> Cancel upload</button>\n\n <button id=\'delete_upload\' type="button" class="btn btn-default delete"><i class="fa fa-trash text-danger" aria-hidden="true"></i> Delete</button>\n\n </div>\n\n <input type="checkbox" class="toggle">\n\n <!-- The global file processing state -->\n\n <span class="fileupload-process"></span>\n\n </div>\n\n <!-- The global progress state -->\n\n <div class="col-lg-5 fileupload-progress fade">\n\n <!-- The global progress bar -->\n\n <div class="progress" role="progressbar" aria-valuemin="0" aria-valuemax="100">\n\n <div class="progress-bar" style="width:0%;"></div>\n\n </div>\n\n <!-- The extended global progress state -->\n\n <div class="progress-extended"> </div>\n\n </div>\n\n </div>\n\n <!-- The table listing the files available for upload/download -->\n\n <table role="presentation" class="table table-striped"><tbody class="files"></tbody></table>\n\n </form>\n\n</div>\n\n<!-- The template to display files available for upload -->\n\n<script id="template-upload" type="text/x-tmpl">\n\n{% for (var i=0, file; file=o.files[i]; i++) { %}\n\n <tr class="template-upload fade">\n\n <td>\n\n <span class="preview"></span>\n\n </td>\n\n <td>\n\n <p class="name">{%=file.name%}</p>\n\n <strong class="error text-danger"></strong>\n\n </td>\n\n <td>\n\n <div class="progress progress-small active" role="progressbar" aria-valuemin="0" aria-valuemax="100" aria-valuenow="0"><div class="progress-bar" style="width:0%;"><span>{%=o.formatFileSize(file.size)%}</span></div></div>\n\n </td>\n\n <td>\n\n {% if (!i && !o.options.autoUpload) { %}\n\n <button class="btn btn-default start" disabled>\n\n <i class="fa fa-arrow-circle-o-up text-default" aria-hidden="true"></i>\n\n <span>Start</span>\n\n </button>\n\n {% } %}\n\n {% if (!i) { %}\n\n <button class="btn btn-default cancel">\n\n <i class="fa fa-ban text-warning" aria-hidden="true"></i>\n\n <span>Cancel</span>\n\n </button>\n\n {% } %}\n\n </td>\n\n </tr>\n\n{% } %}\n\n</script>\n\n<!-- The template to display files available for download -->\n\n<script id="template-download" type="text/x-tmpl">\n\n{% for (var i=0, file; file=o.files[i]; i++) { %}\n\n <tr class="template-download fade">\n\n <td>\n\n <span class="preview">\n\n {% if (file.thumbnailUrl) { %}\n\n <a href="{%=file.url%}" title="{%=file.name%}" download="{%=file.name%}" data-gallery><img src="{%=file.thumbnailUrl%}"></a>\n\n {% } %}\n\n </span>\n\n </td>\n\n <td>\n\n <p class="name">\n\n {% if (file.url) { %}\n\n <a href="{%=file.url%}" title="{%=file.name%}" download="{%=file.name%}">{%=file.name%}</a>\n\n {% } else { %}\n\n <span>{%=file.name%}</span>\n\n {% } %}\n\n </p>\n\n {% if (file.error) { %}\n\n <div><span class="label label-danger">Error</span> {%=file.error%}</div>\n\n {% } %}\n\n </td>\n\n <td>\n\n <span class="size">{%=o.formatFileSize(file.size)%}</span>\n\n </td>\n\n <td>\n\n {% if (file.delete_url) { %}\n\n <button class="btn btn-default delete" data-type="{%=file.delete_type%}" data-url="up/file/{%=file.delete_url%}">\n\n <i class="fa fa-trash text-danger" aria-hidden="true"></i>\n\n <span>Delete</span>\n\n </button>\n\n <input type="checkbox" name="delete" value="1" class="toggle">\n\n {% } else { %}\n\n <button class="btn btn-default cancel">\n\n <i class="fa fa-ban text-warning" aria-hidden="true"></i>\n\n <span>Cancel</span>\n\n </button>\n\n {% } %}\n\n </td>\n\n </tr>\n\n{% } %}\n\n</script>\n'
}
def test_validate(self):
"""Test the validate method"""
file_upload = FileUpload(self.request)
result = file_upload.validate({'type': 'text/plain', 'size': int(self.upload_min_size)})
assert result is True
result = file_upload.validate({'type': 'text/plain', 'size': int(self.upload_min_size) -1})
assert result is False
result = file_upload.validate({'type': 'text/plain', 'size': int(self.upload_max_size)})
assert result is True
result = file_upload.validate({'type': 'text/plain', 'size': int(self.upload_max_size) +1})
assert result is False
def test_validate(self):
"""Test the validate method"""
file_upload = FileUpload(self.request)
result = file_upload.validate({
'type': 'text/plain',
'size': int(self.upload_min_size)
})
assert result is True
result = file_upload.validate({
'type': 'text/plain',
'size': int(self.upload_min_size) - 1
})
assert result is False
result = file_upload.validate({
'type': 'text/plain',
'size': int(self.upload_max_size)
})
assert result is True
result = file_upload.validate({
'type': 'text/plain',
'size': int(self.upload_max_size) + 1
})
assert result is False
result = file_upload.validate({
'type': 'hello',
'size': int(self.upload_max_size)
})
assert result is False
def test_fileinfo(self):
"""Test the fileinfo method"""
file_upload = FileUpload(self.request)
result = file_upload.fileinfo(
self.request.session['upload_directory'] + '/people.tsv')
assert result == {
'delete_type': 'DELETE',
'size': 174,
'delete_url':
self.request.session['upload_directory'] + '/people.tsv',
'name': self.request.session['upload_directory'] + '/people.tsv'
}
result = file_upload.fileinfo(
self.request.session['upload_directory'] + '/people.type')
assert result is None
file_upload.delete_method = 'OTHER'
result = file_upload.fileinfo(
self.request.session['upload_directory'] + '/people.tsv')
assert result == {
'delete_type':
'OTHER',
'size':
174,
'delete_url':
self.request.session['upload_directory'] + '/people.tsv' +
'&_method=DELETE',
'name':
self.request.session['upload_directory'] + '/people.tsv'
}
def test_validate(self):
fu = FileUpload(self.request);
nefi = {}
nefi['size']=0
fu.validate(nefi)
nefi['size']=99999999999
fu.validate(nefi)
def test_fileinfo(self):
"""Test the fileinfo method"""
file_upload = FileUpload(self.request)
result = file_upload.fileinfo(self.request.session['upload_directory'] + '/people.tsv')
assert result == {
'delete_type': 'DELETE',
'size': 174,
'delete_url': self.request.session['upload_directory'] + '/people.tsv',
'name': self.request.session['upload_directory'] + '/people.tsv'
}
result = file_upload.fileinfo(self.request.session['upload_directory'] + '/people.type')
assert result is None
file_upload.delete_method = 'OTHER'
result = file_upload.fileinfo(self.request.session['upload_directory'] + '/people.tsv')
assert result == {
'delete_type': 'OTHER',
'size': 174,
'delete_url': self.request.session['upload_directory'] + '/people.tsv' + '&_method=DELETE',
'name': self.request.session['upload_directory'] + '/people.tsv'
}
def test_fileinfo(self):
fu = FileUpload(self.request);
fu.fileinfo("personne.tsv")
def test_filepath(self):
fu = FileUpload(self.request);
fu.filepath('toto')
def test_upload(self):
fu = FileUpload(self.request);
fu.upload()
def test_options(self):
"""Test the options method"""
file_upload = FileUpload(self.request)
result = file_upload.options()
assert isinstance(result, Response)
#FIXME: don't pass on travis, but ok on local
# def test_get(self):
# """Test the get method"""
# file_upload = FileUpload(self.request)
# file_upload.upload_dir = self.request.session['upload_directory']
# result = file_upload.get()
# assert result == {
# 'files': [{
# 'name': 'transcript.tsv',
# 'delete_url': 'transcript.tsv',
# 'size': 772,
# 'delete_type': 'DELETE'
# }, {
# 'name': 'people.tsv',
# 'delete_url': 'people.tsv',
# 'size': 174,
# 'delete_type': 'DELETE'
# }, {
# 'name': 'turtle_data.ttl',
# 'delete_url': 'turtle_data.ttl',
# 'size': 5971,
# 'delete_type': 'DELETE'
# }, {
# 'name': 'instruments.tsv',
# 'delete_url': 'instruments.tsv',
# 'size': 232,
# 'delete_type': 'DELETE'
# }, {
# 'name': 'play_instrument.tsv',
# 'delete_url': 'play_instrument.tsv',
# 'size': 107,
# 'delete_type': 'DELETE'
# }, {
# 'name': 'qtl.tsv',
# 'delete_url': 'qtl.tsv',
# 'size': 172,
# 'delete_type': 'DELETE'
# }, {
# 'name': 'small_data.gff3',
# 'delete_url': 'small_data.gff3',
# 'size': 2266,
# 'delete_type': 'DELETE'
# }, {
# 'name': 'bed_example.bed',
# 'delete_url': 'bed_example.bed',
# 'size': 689,
# 'delete_type': 'DELETE'
# }]
# }
#FIXME:
# def test_delete(self):
# """Test the delete method"""
# file_upload = FileUpload(self.request)
# result = file_upload.delete()
# print(result)
#FIXME:
# def test_post(self):
"""Test the post method"""
def test_upload(self):
"""Test the upload method"""
file_upload = FileUpload(self.request)
result = file_upload.upload()
def test_options(self):
"""Test the options method"""
file_upload = FileUpload(self.request)
result = file_upload.options()
assert isinstance(result, Response)
#FIXME: don't pass on travis, but ok on local
# def test_get(self):
# """Test the get method"""
# file_upload = FileUpload(self.request)
# file_upload.upload_dir = self.request.session['upload_directory']
# result = file_upload.get()
# assert result == {
# 'files': [{
# 'name': 'transcript.tsv',
# 'delete_url': 'transcript.tsv',
# 'size': 772,
# 'delete_type': 'DELETE'
# }, {
# 'name': 'people.tsv',
# 'delete_url': 'people.tsv',
# 'size': 174,
# 'delete_type': 'DELETE'
# }, {
# 'name': 'turtle_data.ttl',
# 'delete_url': 'turtle_data.ttl',
# 'size': 5971,
# 'delete_type': 'DELETE'
# }, {
# 'name': 'instruments.tsv',
# 'delete_url': 'instruments.tsv',
# 'size': 232,
# 'delete_type': 'DELETE'
# }, {
# 'name': 'play_instrument.tsv',
# 'delete_url': 'play_instrument.tsv',
# 'size': 107,
# 'delete_type': 'DELETE'
# }, {
# 'name': 'qtl.tsv',
# 'delete_url': 'qtl.tsv',
# 'size': 172,
# 'delete_type': 'DELETE'
# }, {
# 'name': 'small_data.gff3',
# 'delete_url': 'small_data.gff3',
# 'size': 2266,
# 'delete_type': 'DELETE'
# }, {
# 'name': 'bed_example.bed',
# 'delete_url': 'bed_example.bed',
# 'size': 689,
# 'delete_type': 'DELETE'
# }]
# }
#FIXME:
# def test_delete(self):
# """Test the delete method"""
# file_upload = FileUpload(self.request)
# result = file_upload.delete()
# print(result)
#FIXME:
# def test_post(self):
"""Test the post method"""
def test_upload(self):
"""Test the upload method"""
file_upload = FileUpload(self.request)
result = file_upload.upload()
assert result == {'html': '<div>\n\n <p>Supported file: CSV, TSV, GFF, TTL</p>\n\n <p><mark>the maximum file upload size is ___SIZE_UPLOAD____</mark></p>\n\n <hr/>\n\n <!-- The file upload form used as target for the file upload widget -->\n\n <form id="fileupload" action="/up/" method="POST" enctype="multipart/form-data">\n\n <!-- Redirect browsers with JavaScript disabled to the origin page -->\n\n <!-- <noscript><input type="hidden" name="redirect" value="https://bipaa.genouest.org/askomics"></noscript> -->\n\n <!-- The fileupload-buttonbar contains buttons to add/delete files and start/cancel the upload -->\n\n <div class="row fileupload-buttonbar">\n\n <div class="col-lg-7">\n\n <div class="btn-group" role="group" aria-label="...">\n\n <span id="add_files_upload" class="btn btn-default fileinput-button">\n\n <i class="fa fa-plus text-success" aria-hidden="true"></i> Add files ...\n\n <input type="file" name="files[]" multiple>\n\n </span>\n\n <button id=\'start_upload\' type="button" class="btn btn-default start"><i class="fa fa-arrow-circle-o-up text-default" aria-hidden="true"></i> Start upload</button>\n\n <button id=\'cancel_upload\' type="button" class="btn btn-default cancel"><i class="fa fa-ban text-warning" aria-hidden="true"></i> Cancel upload</button>\n\n <button id=\'delete_upload\' type="button" class="btn btn-default delete"><i class="fa fa-trash text-danger" aria-hidden="true"></i> Delete</button>\n\n </div>\n\n <input type="checkbox" class="toggle">\n\n <!-- The global file processing state -->\n\n <span class="fileupload-process"></span>\n\n </div>\n\n <!-- The global progress state -->\n\n <div class="col-lg-5 fileupload-progress fade">\n\n <!-- The global progress bar -->\n\n <div class="progress" role="progressbar" aria-valuemin="0" aria-valuemax="100">\n\n <div class="progress-bar" style="width:0%;"></div>\n\n </div>\n\n <!-- The extended global progress state -->\n\n <div class="progress-extended"> </div>\n\n </div>\n\n </div>\n\n <!-- The table listing the files available for upload/download -->\n\n <table role="presentation" class="table table-striped"><tbody class="files"></tbody></table>\n\n </form>\n\n</div>\n\n<!-- The template to display files available for upload -->\n\n<script id="template-upload" type="text/x-tmpl">\n\n{% for (var i=0, file; file=o.files[i]; i++) { %}\n\n <tr class="template-upload fade">\n\n <td>\n\n <span class="preview"></span>\n\n </td>\n\n <td>\n\n <p class="name">{%=file.name%}</p>\n\n <strong class="error text-danger"></strong>\n\n </td>\n\n <td>\n\n <div class="progress progress-small active" role="progressbar" aria-valuemin="0" aria-valuemax="100" aria-valuenow="0"><div class="progress-bar" style="width:0%;"><span>{%=o.formatFileSize(file.size)%}</span></div></div>\n\n </td>\n\n <td>\n\n {% if (!i && !o.options.autoUpload) { %}\n\n <button class="btn btn-default start" disabled>\n\n <i class="fa fa-arrow-circle-o-up text-default" aria-hidden="true"></i>\n\n <span>Start</span>\n\n </button>\n\n {% } %}\n\n {% if (!i) { %}\n\n <button class="btn btn-default cancel">\n\n <i class="fa fa-ban text-warning" aria-hidden="true"></i>\n\n <span>Cancel</span>\n\n </button>\n\n {% } %}\n\n </td>\n\n </tr>\n\n{% } %}\n\n</script>\n\n<!-- The template to display files available for download -->\n\n<script id="template-download" type="text/x-tmpl">\n\n{% for (var i=0, file; file=o.files[i]; i++) { %}\n\n <tr class="template-download fade">\n\n <td>\n\n <span class="preview">\n\n {% if (file.thumbnailUrl) { %}\n\n <a href="{%=file.url%}" title="{%=file.name%}" download="{%=file.name%}" data-gallery><img src="{%=file.thumbnailUrl%}"></a>\n\n {% } %}\n\n </span>\n\n </td>\n\n <td>\n\n <p class="name">\n\n {% if (file.url) { %}\n\n <a href="{%=file.url%}" title="{%=file.name%}" download="{%=file.name%}">{%=file.name%}</a>\n\n {% } else { %}\n\n <span>{%=file.name%}</span>\n\n {% } %}\n\n </p>\n\n {% if (file.error) { %}\n\n <div><span class="label label-danger">Error</span> {%=file.error%}</div>\n\n {% } %}\n\n </td>\n\n <td>\n\n <span class="size">{%=o.formatFileSize(file.size)%}</span>\n\n </td>\n\n <td>\n\n {% if (file.delete_url) { %}\n\n <button class="btn btn-default delete" data-type="{%=file.delete_type%}" data-url="up/file/{%=file.delete_url%}">\n\n <i class="fa fa-trash text-danger" aria-hidden="true"></i>\n\n <span>Delete</span>\n\n </button>\n\n <input type="checkbox" name="delete" value="1" class="toggle">\n\n {% } else { %}\n\n <button class="btn btn-default cancel">\n\n <i class="fa fa-ban text-warning" aria-hidden="true"></i>\n\n <span>Cancel</span>\n\n </button>\n\n {% } %}\n\n </td>\n\n </tr>\n\n{% } %}\n\n</script>\n'}
def test_upload(self):
"""Test the upload method"""
file_upload = FileUpload(self.request)
result = file_upload.upload()