def bgraph(self, threshold):
bg = BGraph(self.graph, self.d, self.test_utils)
count_true_diags = 0
count_false_diags = 0
count_unaligned_diags = 0
for diag in self.__diags(threshold):
is_true_diag = self.test_utils.is_true_diagonal(diag)
if is_true_diag == self.test_utils.TRUE_DIAG:
count_true_diags +=1
elif is_true_diag == self.test_utils.FALSE_DIAG:
count_false_diags += 1
else:
count_unaligned_diags += 1
self.test_utils.add_to_diags(diag)
bg.add_diagonal(diag)
self.test_utils.logger.info("true diag = "+ str(count_true_diags) + " false diag = " + str(count_false_diags) + " unanligned = " + str(count_unaligned_diags) + "\n")
return bg
def bgraph_from_genome(self):
bg = BGraph(self.graph, self.d, self.test_utils)
for key, rect in self.rectangles.items():
for key, diag in rect.diagonals.items():
bg.add_diagonal(diag)
return bg
def bgraph(self, threshold):
bg = BGraph(self.graph, self.d, self.test_utils)
for diag in self.__diags(threshold):
bg.add_diagonal(diag)
return bg
def bgraph(self, threshold):
bg = BGraph(self.graph, self.d, self.test_utils)
for diag in self.__diags(threshold):
bg.add_diagonal(diag)
return bg
