class ArticleAucPrEvaluationTest(CalculationAssertions):
@patch('biocreative.evaluation.calculation.hits.Hits', spec=True)
def setUp(self, unused):
self.evaluator = ArticleAucPrEvaluation()
self.evaluator.store_p_at_current_r = Mock()
self.std_item = None
for attr in C.HITS_ATTRIBUTES:
setattr(self.evaluator.hits, attr, 2)
def test_evaluate_with_true_item(self):
self.evaluate_with_std_item(True)
self.assert_hits(self.evaluator.hits, tp=3, tn=2, fp=2, fn=1)
def test_evaluate_with_false_item(self):
self.evaluate_with_std_item(False)
self.assert_hits(self.evaluator.hits, tp=2, tn=2, fp=3, fn=2)
def test_evaluate_with_illegal_item(self):
self.assertRaises(TypeError, self.evaluator.evaluate, None, 1, None)
def evaluate_with_std_item(self, flag):
self.evaluator.evaluate(None, flag, None)
self.assert_(self.evaluator.store_p_at_current_r.called)
def setUp(self, unused):
self.evaluator = ArticleAucPrEvaluation()
self.evaluator.store_p_at_current_r = Mock()
self.std_item = None
for attr in C.HITS_ATTRIBUTES:
setattr(self.evaluator.hits, attr, 2)