def read_file(filelike, simple_layout=False):
"""
Read a file (either an IO object or a filename) and return a biopac.
Datafile object.
Simply a shorthand for bioread.readers.AcqReader.read_file()
"""
return AcqReader.read_file(filelike, simple_layout)
def run(self):
old_err = sys.stderr
sys.stderr = self.err
self.parser = self.__make_parser()
options, args = self.parser.parse_args(self.argv[1:])
if len(args) <> 2:
self.parser.error("Must specify both ACQ_FILE and MAT_FILE.\n" +
"Try --help for more instructions.")
try:
infile = args[0]
if infile == '-':
infile = StringIO.StringIO(sys.stdin.read())
data = AcqReader.read_file(infile)
except:
sys.stderr.write("Error reading %s\n" % args[0])
sys.exit(1)
try:
MatlabWriter.write_file(data, args[1], compress=options.compress)
except:
sys.stderr.write("Error writing %s\n" % args[1])
sys.exit(1)
sys.stderr = old_err
def run(self):
old_err = sys.stderr
sys.stderr = self.err
self.parser = self.__make_parser()
options, args = self.parser.parse_args(self.argv[1:])
if len(args) != 2:
self.parser.error(
"Must specify both ACQ_FILE and MAT_FILE.\n" +
"Try --help for more instructions.")
try:
infile = args[0]
if infile == '-':
infile = StringIO.StringIO(sys.stdin.read())
data = AcqReader.read_file(infile)
except:
sys.stderr.write("Error reading %s\n" % args[0])
sys.exit(1)
try:
MatlabWriter.write_file(data, args[1], compress=options.compress)
except:
sys.stderr.write("Error writing %s\n" % args[1])
sys.exit(1)
sys.stderr = old_err
