def test02(self):
with open(path.join(datadir, 'test2.cmscores')) as f:
rows = list(cmscores.read_scores(f))
self.assertEqual(len(rows[0]), len(cmscores.CMALIGN_SCORE_FIELDS))
self.assertEqual(rows[0][0], 'FUM0LCO01B97N3')
self.assertEqual(rows[-1][0], 'FUM0LCO01D7IKL')
def test02(self):
with open(path.join(datadir, 'test2.cmscores')) as f:
rows = list(cmscores.read_scores(f))
self.assertEqual(len(rows[0]), len(cmscores.CMALIGN_SCORE_FIELDS))
self.assertEqual(rows[0][0], 'FUM0LCO01B97N3')
self.assertEqual(rows[-1][0], 'FUM0LCO01D7IKL')
def test01(self):
with open(path.join(datadir, 'test1.cmscores')) as f:
rows = list(cmscores.read_scores(f))
self.assertEqual(len(rows[0]), len(cmscores.CMALIGN_SCORE_FIELDS))
self.assertEqual(rows[0][0], '2')
self.assertEqual(rows[-1][0], '195')
def test01(self):
with open(path.join(datadir, 'test1.cmscores')) as f:
rows = list(cmscores.read_scores(f))
self.assertEqual(len(rows[0]), len(cmscores.CMALIGN_SCORE_FIELDS))
self.assertEqual(rows[0][0], '2')
self.assertEqual(rows[-1][0], '195')
