def test_add_result_twice(self):
"adding a result set twice does updates"
fixture = join(FIXTURE_DIR, "bp-post-to-elife.json")
fixture = json.load(open(fixture, "r"))
logic.add_result(fixture)
self.assertEqual(logic.row_count(), 3) # 6 rows, 3 that are protocols
self.assertEqual(models.ArticleProtocol.objects.count(), 6)
logic.add_result(fixture)
self.assertEqual(logic.row_count(), 3)
self.assertEqual(models.ArticleProtocol.objects.count(), 6)
def test_add_result_item_twice(self):
"adding a result item twice does an update"
good_result = {
"protocol_sequencing_number": "s4-3",
"protocol_title": "Cell culture and transfection",
"is_protocol": True,
"protocol_status": 0,
"uri": "https://en.bio-protocol.org/rap.aspx?eid=24419&item=s4-3",
"msid": 12345,
}
logic.upsert(good_result)
self.assertEqual(logic.row_count(), 1)
logic.upsert(good_result)
self.assertEqual(logic.row_count(), 1)
def test_add_result_bad_item(self):
"a result with a bad item is not discarded entirely"
fixture = join(FIXTURE_DIR, "bp-post-to-elife.json")
result = json.load(open(fixture, "r"))
del result["data"][0][
"URI"] # fails validation 'all keys must be present'
logic.add_result(result)
self.assertEqual(logic.row_count(), 3) # 5 rows, 3 that are protocols
self.assertEqual(models.ArticleProtocol.objects.count(), 5)
def test_add_result(self):
"an entire result from BP can be processed, validated and inserted"
fixture = join(FIXTURE_DIR, "bp-post-to-elife.json")
logic.add_result(json.load(open(fixture, "r")))
self.assertEqual(logic.row_count(), 3) # 6 rows, 3 that are protocols
self.assertEqual(models.ArticleProtocol.objects.count(), 6)
def test_logic_row_count_non_zero(self):
logic._add_result_item(self.fixture)
self.assertEqual(logic.row_count(), 1)
def test_logic_row_count(self):
self.assertEqual(logic.row_count(), 0)