def test_get_graph_from_bare_data(self):
cfg = mycfg.get_config()
g = netgen.get_graph_from_bare_data(cfg['group_1_mat_fnames'][0],
cfg['blacklist_fname'],
cfg['density'],
cfg['include_mst'],
weighted=False)
assert type(g) is igraph.Graph
def setUp(self):
self.cfg = mycfg.get_config()
def setUp(self):
# to be able to run the script also without a window:
# matplotlib.use('Agg')
self.cfg = mycfg.get_config()
def test_check_full_config_with_mycfg(self):
#testscripts/mycfg.py should always have a full copy of config
cfg = mycfg.get_config()
config.check_full_config(cfg)
def setUp(self):
self.np_set_err = np.seterr(all="raise")
self.cfg = mycfg.get_config()