def plot_profile(self, plot_shift=None):
import pylab
from bumps.plotutil import auto_shift
plot_shift = plot_shift if plot_shift is not None else Experiment.profile_shift
trans = auto_shift(plot_shift)
if self.ismagnetic:
z,rho,irho,rhoM,thetaM = self.magnetic_profile()
#rhoM_net = rhoM*numpy.cos(numpy.radians(thetaM))
pylab.plot(z,rho,transform=trans)
pylab.plot(z,irho,hold=True,transform=trans)
pylab.plot(z,rhoM,hold=True,transform=trans)
pylab.xlabel('depth (A)')
pylab.ylabel('SLD (10^6 / A**2)')
pylab.legend(['rho','irho','rhoM'])
if (abs(thetaM-thetaM[0])>1e-3).any():
ax = pylab.twinx()
pylab.plot(z,thetaM,':k',hold=True,axes=ax,transform=trans)
pylab.ylabel('magnetic angle (degrees)')
else:
z,rho,irho = self.step_profile()
pylab.plot(z,rho,':g',z,irho,':b',transform=trans)
z,rho,irho = self.smooth_profile()
pylab.plot(z,rho,'-g',z,irho,'-b', hold=True,transform=trans)
pylab.legend(['rho','irho'])
pylab.xlabel('depth (A)')
pylab.ylabel('SLD (10^6 / A**2)')
def plot_profile(self, plot_shift=None):
import pylab
from bumps.plotutil import auto_shift
plot_shift = plot_shift if plot_shift is not None else Experiment.profile_shift
trans = auto_shift(plot_shift)
if self.ismagnetic:
z,rho,irho,rhoM,thetaM = self.magnetic_profile()
#rhoM_net = rhoM*numpy.cos(numpy.radians(thetaM))
pylab.plot(z,rho,transform=trans)
pylab.plot(z,irho,hold=True,transform=trans)
pylab.plot(z,rhoM,hold=True,transform=trans)
pylab.xlabel('depth (A)')
pylab.ylabel('SLD (10^6 / A**2)')
pylab.legend(['rho','irho','rhoM'])
if (abs(thetaM-thetaM[0])>1e-3).any():
ax = pylab.twinx()
pylab.plot(z,thetaM,':k',hold=True,axes=ax,transform=trans)
pylab.ylabel('magnetic angle (degrees)')
else:
z,rho,irho = self.step_profile()
pylab.plot(z,rho,':g',z,irho,':b',transform=trans)
z,rho,irho = self.smooth_profile()
pylab.plot(z,rho,'-g',z,irho,'-b', hold=True,transform=trans)
pylab.legend(['rho','irho'])
pylab.xlabel('depth (A)')
pylab.ylabel('SLD (10^6 / A**2)')
def plot_profile(self, plot_shift=0.):
import pylab
from bumps.plotutil import auto_shift
trans = auto_shift(plot_shift)
z, rho, irho = self.step_profile()
pylab.plot(z, rho, '-g', z, irho, '-b', transform=trans)
z, rho, irho = self.smooth_profile()
pylab.plot(z, rho, ':g', z, irho, ':b', transform=trans)
pylab.legend(['rho', 'irho'])
def plot_profile(self, plot_shift=0.):
import matplotlib.pyplot as plt
from bumps.plotutil import auto_shift
trans = auto_shift(plot_shift)
z, rho, irho = self.step_profile()
plt.plot(z, rho, '-g', z, irho, '-b', transform=trans)
z, rho, irho = self.smooth_profile()
plt.plot(z, rho, ':g', z, irho, ':b', transform=trans)
plt.legend(['rho', 'irho'])
def plot_profile(self, plot_shift=None):
import matplotlib.pyplot as plt
from bumps.plotutil import auto_shift
plot_shift = plot_shift if plot_shift is not None else Experiment.profile_shift
trans = auto_shift(plot_shift)
if self.ismagnetic:
if not self.step_interfaces:
z, rho, irho, rhoM, thetaM = self.magnetic_step_profile()
#rhoM_net = rhoM*np.cos(np.radians(thetaM))
plt.plot(z, rho, ':g', transform=trans)
plt.plot(z, irho, ':b', transform=trans)
plt.plot(z, rhoM, ':r', transform=trans)
if (abs(thetaM - DEFAULT_THETA_M) > 1e-3).any():
ax = plt.twinx()
plt.plot(z, thetaM, ':k', axes=ax, transform=trans)
plt.ylabel('magnetic angle (degrees)')
z, rho, irho, rhoM, thetaM = self.magnetic_smooth_profile()
#rhoM_net = rhoM*np.cos(np.radians(thetaM))
handles = [
plt.plot(z, rho, '-g', transform=trans, label='rho')[0],
plt.plot(z, irho, '-b', transform=trans, label='irho')[0],
plt.plot(z, rhoM, '-r', transform=trans, label='rhoM')[0],
]
if (abs(thetaM - DEFAULT_THETA_M) > 1e-3).any():
ax = plt.twinx()
h = plt.plot(z,
thetaM,
'-k',
axes=ax,
transform=trans,
label='thetaM')
handles.append(h[0])
plt.ylabel('magnetic angle (degrees)')
plt.xlabel('depth (A)')
plt.ylabel('SLD (10^6 / A**2)')
labels = [h.get_label() for h in handles]
plt.legend(handles=handles, labels=labels)
else:
if not self.step_interfaces:
z, rho, irho = self.step_profile()
plt.plot(z, rho, ':g', z, irho, ':b', transform=trans)
z, rho, irho = self.smooth_profile()
plt.plot(z, rho, '-g', z, irho, '-b', transform=trans)
plt.legend(['rho', 'irho'])
plt.xlabel('depth (A)')
plt.ylabel('SLD (10^6 / A**2)')