def get(package_id, package_version, urls, download_location):
package_found = False
log.info("Searching for package: "+str(package_id)+" in "+str(urls))
if not os.path.exists(download_location):
os.makedirs(download_location)
handle = None
if '://' in urls:
with urllib.request.urlopen(urls) as uf:
handle = StringIO(uf.read())
elif os.path.exists(urls):
handle = open(urls, 'r')
else:
raise Exception("--urls option does not look like a url or a file path")
for ld in yield_packages(handle):
# TODO: check platform/architecture, failover to all if available?
# iid, version, platform, architecture, upstream_url, checksum, alternate_url = line.split('\t')
if ld['id'] == package_id.strip() and (package_version == None or ld['version'] == package_version):
package_found = True
# I worry about this being unreliable. TODO: add target filename column?
pkg_name = package_name(ld)
storage_path = os.path.join(download_location, pkg_name)
url = get_url(ld)
urllib.request.urlretrieve(url, storage_path)
download_checksum = hashlib.sha256(open(storage_path, 'rb').read()).hexdigest()
if ld['sha256sum'] != download_checksum:
log.error('Checksum does not match, something seems to be wrong.\n'
'{expected}\t(expected)\n{actual}\t(downloaded)').format(
expected=ld['sha256sum'],
actual=download_checksum)
else:
log.info('Download successful for %s.' % (pkg_name))
if not package_found:
log.warning('Package (%s) could not be found in this server.' % (package_id))
def get(package_id, package_version, download_location):
package_found = False
database = PACKAGE_SERVER + 'urls.tsv'
log.info("Searching for package: "+str(package_id)+" in "+str(database))
if not os.path.exists(download_location):
os.makedirs(download_location)
for ld in yield_packages(urllib2.urlopen(database)):
# TODO: check platform/architecture, failover to all if available?
# iid, version, platform, architecture, upstream_url, checksum, alternate_url = line.split('\t')
if ld['id'] == package_id.strip() and ld['platform']== 'src' and (package_version == None or ld['version'] == package_version):
package_found = True
# I worry about this being unreliable. TODO: add target filename column?
pkg_name = package_name(ld)
storage_path = os.path.join(download_location, pkg_name)
url = get_url(ld)
urllib.urlretrieve(url, storage_path)
download_checksum = hashlib.sha256(open(storage_path, 'rb').read()).hexdigest()
if ld['sha256sum'] != download_checksum:
log.error('Checksum does not match, something seems to be wrong.\n'
'{expected}\t(expected)\n{actual}\t(downloaded)').format(
expected=ld['sha256sum'],
actual=download_checksum)
else:
log.info('Download successful for %s.' % (pkg_name))
if not package_found:
log.warning('Package (%s) could not be found in this server.' % (package_id))
def main():
retcode = 0
for package in yield_packages(sys.stdin):
# For piped in diff, header can appear as +# Id ...
if package['id'].startswith("+#"):
continue
print(package)
# Remove the '+' at the beginning
package['id'] = package['id'][1:]
output_package_path = package_to_path(**package) + package['ext']
err = download_url(package['url'], output_package_path)
if err is not None:
log.error("Could not download file: %s", err)
retcode = 1
else:
log.info("%s downloaded successfully", output_package_path)
err = verify_file(output_package_path, package['sha256sum'])
if err is not None:
log.error("Could not verify file: %s", err)
retcode = 1
else:
log.info("%s verified successfully with hash %s", output_package_path, package['sha256sum'])
exit(retcode)
def main():
retcode = 0
for package in yield_packages(sys.stdin):
# For piped in diff, header can appear as +# Id ...
if package['id'].startswith("+#"):
continue
print package
# Remove the '+' at the beginning
package['id'] = package['id'][1:]
output_package_path = package_to_path(**package) + package['ext']
err = download_url(package['url'], output_package_path)
if err is not None:
log.error("Could not download file: %s", err)
retcode = 1
else:
log.info("%s downloaded successfully", output_package_path)
err = verify_file(output_package_path, package['sha256sum'])
if err is not None:
log.error("Could not verify file: %s", err)
retcode = 1
else:
log.info("%s verified successfully with hash %s", output_package_path, package['sha256sum'])
exit(retcode)
def main(galaxy_package_file):
visited_paths = []
api_data = {'data': []}
with open(galaxy_package_file, 'r') as handle:
retcode = 0
xunit = XUnitReportBuilder()
for ld in yield_packages(handle):
nice_name = package_to_path(**ld)
if not os.path.exists(ld['id']):
os.makedirs(ld['id'])
output_package_path = os.path.join(ld['id'], nice_name) + ld['ext']
visited_paths.append(os.path.abspath(output_package_path))
tmpld = {}
tmpld.update(ld)
tmpld['_gen'] = output_package_path
api_data['data'].append(tmpld)
if os.path.exists(output_package_path) and os.path.getsize(output_package_path) == 0:
log.error("Empty download, removing %s %s", ld['url'], output_package_path)
cleanup_file(output_package_path)
if os.path.exists(output_package_path):
log.debug("URL exists %s", ld['url'])
xunit.skip(nice_name)
else:
log.info("URL missing, downloading %s to %s", ld['url'], output_package_path)
if ld['url'].startswith('/'):
err = symlink_depot(ld['url'], output_package_path)
else:
err = download_url(ld['url'], output_package_path)
if err is not None:
xunit.failure(nice_name, "DownloadError", err)
cleanup_file(output_package_path)
continue
# Check sha256sum of download
err = verify_file(output_package_path, ld['sha'].strip())
if err is not None:
xunit.error(nice_name, "Sha256sumError", err)
cleanup_file(output_package_path)
continue
xunit.ok(nice_name)
with open('report.xml', 'w') as xunit_handle:
xunit_handle.write(xunit.serialize())
print(json.dumps(api_data, indent=2))
sys.exit(retcode)
def main(galaxy_package_file):
with open(galaxy_package_file, 'r') as handle:
retcode = 0
identifiers = set()
for ld, lineno, line, extraret in yield_packages(handle, retcode=retcode, meta=True):
if extraret > 0:
retcode = extraret
try:
for x in HEADER_KEYS[0:5] + HEADER_KEYS[6:6]:
# Skip extension, as it is OK to be empty
if ld.get(x, '').strip() == '':
log.error("[%s] Empty %s", lineno, x)
retcode = 1
if ld['platform'] not in ('linux', 'windows', 'darwin', 'src'):
log.error("[%s] Unknown platform %s", lineno, ld['platform'])
retcode = 1
if ld['arch'] not in ('x32', 'x64', 'all'):
log.error("[%s] Unknown architecture %s", lineno, ld['arch'])
retcode = 1
if len(ld['sha256sum']) != 64:
log.error("[%s] Bad checksum %s", lineno, ld['sha256sum'])
retcode = 1
if ld['sha256sum'] != ld['sha256sum'].lower():
log.error("[%s] Uppercase checksum needs to be lower case %s", lineno, ld['sha256sum'])
retcode = 1
if len(ld['sha256sum']) != 64:
log.error("[%s] sha256sum is not 64 characters long. Typo? %s", lineno, ld['sha256sum'])
retcode = 1
if any([x not in list('1234567890abcdef') for x in list(ld['sha256sum'])]):
log.error("[%s] sha256sum contains non-hexidecimal characters. Typo? %s", lineno, ld['sha256sum'])
retcode = 1
if ld['upstream_first'] not in ('True', 'False'):
log.error("[%s] Upstream first must be 'True' or 'False', was '%s'", lineno, ld['upstream_first'])
retcode = 1
platform_id = (ld['id'], ld['version'], ld['platform'], ld['arch'])
if platform_id in identifiers:
log.error("[%s] identifier is not unique: '%s'", lineno, platform_id)
retcode = 1
else:
identifiers.add(platform_id)
except Exception, e:
log.error("[%s] Line (probably) not tabbed properly: %s", lineno, e)
retcode = 1
sys.exit(retcode)
def main(galaxy_package_file, id, version=None):
with open(galaxy_package_file, 'r') as handle:
for ld in yield_packages(handle):
if ld['id'].lower() != id.lower():
continue
if version is not None and ld['version'].lower() != version.lower():
continue
print """<action type="download_by_url" sha256sum="{0[sha]}">
{1}
</action>""".format(ld, get_url(ld))
def main(galaxy_package_file, id, version=None):
with open(galaxy_package_file, 'r') as handle:
for ld in yield_packages(handle):
if ld['id'].lower() != id.lower():
continue
if version is not None and ld['version'].lower() != version.lower():
continue
print("""<action type="download_by_url" sha256sum="{0[sha]}">
{1}
</action>""".format(ld, get_url(ld)))
def main(galaxy_package_file):
with open(galaxy_package_file, "r") as handle:
retcode = 0
identifiers = set()
for ld, lineno, line, extraret in yield_packages(handle, retcode=retcode, meta=True):
if extraret > 0:
retcode = extraret
try:
for x in HEADER_KEYS[0:5] + HEADER_KEYS[6:6]:
# Skip extension, as it is OK to be empty
if ld.get(x, "").strip() == "":
log.error("[%s] Empty %s", lineno, x)
retcode = 1
if ld["platform"] not in ("linux", "windows", "darwin", "src"):
log.error("[%s] Unknown platform %s", lineno, ld["platform"])
retcode = 1
if ld["arch"] not in ("x32", "x64", "all"):
log.error("[%s] Unknown architecture %s", lineno, ld["arch"])
retcode = 1
if len(ld["sha256sum"]) != 64:
log.error("[%s] Bad checksum %s", lineno, ld["sha256sum"])
retcode = 1
if ld["sha256sum"] != ld["sha256sum"].lower():
log.error("[%s] Uppercase checksum needs to be lower case %s", lineno, ld["sha256sum"])
retcode = 1
if ld["upstream_first"] not in ("True", "False"):
log.error("[%s] Upstream first must be 'True' or 'False', was '%s'", lineno, ld["upstream_first"])
retcode = 1
platform_id = (ld["id"], ld["version"], ld["platform"], ld["arch"])
if platform_id in identifiers:
log.error("[%s] identifier is not unique: '%s'", lineno, platform_id)
retcode = 1
else:
identifiers.add(platform_id)
except Exception, e:
log.error("[%s] Line (probably) not tabbed properly: %s", lineno, e)
retcode = 1
sys.exit(retcode)
def main(galaxy_package_file):
with open(galaxy_package_file, 'r') as handle:
retcode = 0
identifiers = set()
for ld, lineno, line, extraret in yield_packages(handle, retcode=retcode, meta=True):
if extraret > 0:
retcode = extraret
try:
for x in HEADER_KEYS[0:5] + HEADER_KEYS[6:6]:
# Skip extension, as it is OK to be empty
if ld.get(x, '').strip() == '':
log.error("[%s] Empty %s", lineno, x)
retcode = 1
if ld['platform'] not in ('linux', 'windows', 'darwin', 'src'):
log.error("[%s] Unknown platform %s", lineno, ld['platform'])
retcode = 1
if ld['arch'] not in ('x32', 'x64', 'all'):
log.error("[%s] Unknown architecture %s", lineno, ld['arch'])
retcode = 1
if len(ld['sha256sum']) != 64:
log.error("[%s] Bad checksum %s", lineno, ld['sha256sum'])
retcode = 1
if ld['sha256sum'] != ld['sha256sum'].lower():
log.error("[%s] Uppercase checksum needs to be lower case %s", lineno, ld['sha256sum'])
retcode = 1
if ld['upstream_first'] not in ('True', 'False'):
log.error("[%s] Upstream first must be 'True' or 'False', was '%s'", lineno, ld['upstream_first'])
retcode = 1
platform_id = (ld['id'], ld['version'], ld['platform'], ld['arch'])
if platform_id in identifiers:
log.error("[%s] identifier is not unique: '%s'", lineno, platform_id)
retcode = 1
else:
identifiers.add(platform_id)
except Exception, e:
log.error("[%s] Line (probably) not tabbed properly: %s", lineno, e)
retcode = 1
sys.exit(retcode)
def main(galaxy_package_file):
with open(galaxy_package_file, 'r') as handle:
print '# ' + '\t'.join(['Id', 'Version', 'Platform', 'Architecture', 'Upstream Url', 'Extension', 'sha256sum', 'Use upstream'])
res = {}
for ld in yield_packages(handle):
# id, version, platform,a rch, sha
key = '_'.join([ld[x] for x in HEADER_KEYS[0:4] + HEADER_KEYS[6:7]])
if key not in res:
res[key] = []
res[key].append(ld)
for x in sorted(res):
out = []
for key in HEADER_KEYS:
out.append(res[x][0][key])
print '\t'.join(out).rstrip("\n")
def main(galaxy_package_file, dryrun=False):
visited_paths = []
api_data = {'data': []}
with open(galaxy_package_file, 'r') as handle:
retcode = 0
xunit = XUnitReportBuilder()
xunit.ok("I.Am.Alive")
for ld in yield_packages(handle):
nice_name = package_to_path(**ld)
if not os.path.exists(ld['id']):
continue
output_package_path = os.path.join(ld['id'], nice_name) + ld['ext']
if not os.path.exists(output_package_path):
continue
visited_paths.append(os.path.abspath(output_package_path))
if os.path.exists(output_package_path) and os.path.getsize(
output_package_path) == 0:
log.error("Empty download, removing %s %s", ld['url'],
output_package_path)
cleanup_file(output_package_path)
xunit.failure(nice_name, "EmptyFile",
"%s was found to be empty" % output_package_path)
err = verify_file(output_package_path, ld['sha256sum'].strip())
if err is not None:
xunit.failure(nice_name, "ValidationError", err)
err = verify_filetype(output_package_path,
ld['ext'].strip(),
dryrun=dryrun)
if err is not None:
xunit.failure(nice_name, "ValidationError", err)
with open('report.xml', 'w') as xunit_handle:
xunit_handle.write(xunit.serialize())
sys.exit(retcode)
def main(galaxy_package_file):
with open(galaxy_package_file, 'r') as handle:
print '# ' + '\t'.join(['Id', 'Version', 'Platform', 'Architecture', 'Upstream Url', 'Extension', 'sha256sum', 'Alternate Url']),
res = {}
for ld in yield_packages(handle):
# id, version, platform,a rch, sha
key = '_'.join([ld[x] for x in HEADER_KEYS[0:4] + HEADER_KEYS[6:7]])
if key not in res:
res[key] = []
res[key].append(ld)
for x in sorted(res):
out = []
for key in HEADER_KEYS:
out.append(res[x][0][key])
print '\t'.join(out).rstrip("\n")
def main(galaxy_package_file):
with open(galaxy_package_file, "r") as handle:
print "# " + "\t".join(
["Id", "Version", "Platform", "Architecture", "Upstream Url", "Extension", "sha256sum", "Use upstream"]
)
res = {}
for ld in yield_packages(handle):
# id, version, platform,a rch, sha
key = "_".join([ld[x] for x in HEADER_KEYS[0:4] + HEADER_KEYS[6:7]])
if key not in res:
res[key] = []
res[key].append(ld)
for x in sorted(res):
out = []
for key in HEADER_KEYS:
out.append(res[x][0][key])
print "\t".join(out).rstrip("\n")
