Пример #1
0
from django.views.decorators.csrf import csrf_exempt



from chembl_webservices.core.fields import monkeypatch_tastypie_field
monkeypatch_tastypie_field()

SUPPORTED_ENGINES = ['rdkit']
BEAKER_CTAB_TO_SVG_URL = settings.BEAKER_URL + '/ctab2svg'


def fail_method(*args, **kwargs):
    raise NotImplementedError('This method should not be called, must be overridden.')

fakeSerializer = ChEMBLApiSerializer('image')
fakeSerializer.formats = fakeSerializer.formats + ['svg', 'png']
fakeSerializer.content_types['svg'] = 'image/svg+xml'
fakeSerializer.content_types['png'] = 'image/png'
fakeSerializer.to_svg = fail_method
fakeSerializer.to_png = fakeSerializer.to_xml
super(ChEMBLApiSerializer, fakeSerializer).__init__()

available_fields = [f.name for f in MoleculeDictionary._meta.fields]

# ----------------------------------------------------------------------------------------------------------------------


class ImageResource(ChemblModelResource):

# ----------------------------------------------------------------------------------------------------------------------
Пример #2
0
    Chem = None
    Draw = None
    AllChem = None

try:
    from chembl_beaker.beaker.draw import DrawingOptions
except ImportError:
    DrawingOptions = None

from chembl_webservices.core.fields import monkeypatch_tastypie_field
monkeypatch_tastypie_field()

SUPPORTED_ENGINES = ['rdkit', 'indigo']

fakeSerializer = ChEMBLApiSerializer('image')
fakeSerializer.formats = ['png', 'svg', 'json']

available_fields = [f.name for f in MoleculeDictionary._meta.fields]

# ----------------------------------------------------------------------------------------------------------------------


class ImageResource(ChemblModelResource):

# ----------------------------------------------------------------------------------------------------------------------

    image = fields.ApiField()

    class Meta(ChemblResourceMeta):
        resource_name = 'image'
        serializer = fakeSerializer
Пример #3
0
    cffi = True
    import io
    import cairo
    if not hasattr(cairo, 'HAS_PDF_SURFACE'):
        cairo.HAS_PDF_SURFACE = False
    if not hasattr(cairo, 'HAS_SVG_SURFACE'):
        cairo.HAS_SVG_SURFACE = True

SUPPORTED_ENGINES = ['rdkit', 'indigo']

options = DrawingOptions()
options.useFraction = 1.0
options.dblBondOffset = .13

fakeSerializer = ChEMBLApiSerializer('image')
fakeSerializer.formats = ['png', 'svg', 'json']

available_fields = [f.name for f in MoleculeDictionary._meta.fields]

#-----------------------------------------------------------------------------------------------------------------------

class ImageResource(ChemblModelResource):

#-----------------------------------------------------------------------------------------------------------------------

    class Meta(ChemblResourceMeta):
        resource_name = 'image'
        serializer = fakeSerializer
        default_format = 'image/png'
        description = {'api_dispatch_detail' : '''
Get image of the compound, specified by