def test_shouldKeep_kpic_gappy_keep(self): ## setup mode = TrimmingMode.kpic_gappy gappyness = 0.70 gaps = 0.9 parsimony_informative = False constant_site = True assert True == shouldKeep(mode, parsimony_informative, constant_site, gappyness, gaps)
def test_shouldKeep_kpic_trim(self): ## setup mode = TrimmingMode.kpic gappyness = 0.95 gaps = 0.9 parsimony_informative = False constant_site = False assert False == shouldKeep(mode, parsimony_informative, constant_site, gappyness, gaps)