def test_metrics(self): """The 'metrics' command.""" cnarr = cnvlib.read("formats/amplicon.cnr") segments = cnvlib.read("formats/amplicon.cns") resids = cnarr.residuals(segments) self.assertLessEqual(len(resids), len(cnarr)) values = metrics.ests_of_scale(resids) for val in values: self.assertGreater(val, 0)
def test_metrics(self): """The 'metrics' command.""" cnarr = cnvlib.read("formats/amplicon.cnr") segments = cnvlib.read("formats/amplicon.cns") resids = metrics.probe_deviations_from_segments(cnarr, segments) self.assertTrue(len(resids) <= len(cnarr)) values = metrics.ests_of_scale(resids) for val in values: self.assertTrue(val > 0)