def __init__(self, commit_file, bundle_service, worker_dir, max_cache_size_bytes):
super(LocalFileSystemDependencyManager, self).__init__()
self.add_transition(DependencyStage.DOWNLOADING, self._transition_from_DOWNLOADING)
self.add_terminal(DependencyStage.READY)
self.add_terminal(DependencyStage.FAILED)
self._state_committer = JsonStateCommitter(commit_file)
self._bundle_service = bundle_service
self._max_cache_size_bytes = max_cache_size_bytes
self.dependencies_dir = os.path.join(
worker_dir, LocalFileSystemDependencyManager.DEPENDENCIES_DIR_NAME
)
if not os.path.exists(self.dependencies_dir):
logger.info('{} doesn\'t exist, creating.'.format(self.dependencies_dir))
os.makedirs(self.dependencies_dir, 0o770)
# Locks for concurrency
self._dependency_locks = dict() # (parent_uuid, parent_path) -> threading.RLock
self._global_lock = threading.RLock() # Used for add/remove actions
self._paths_lock = threading.RLock() # Used for path name computations
# File paths that are currently being used to store dependencies. Used to prevent conflicts
self._paths = set()
# (parent_uuid, parent_path) -> DependencyState
self._dependencies = dict()
# (parent_uuid, parent_path) -> WorkerThread(thread, success, failure_message)
self._downloading = ThreadDict(fields={'success': False, 'failure_message': None})
self._load_state()
self._stop = False
self._main_thread = None
def __init__(self, commit_file, bundle_service, worker_dir, max_cache_size_bytes):
super(LocalFileSystemDependencyManager, self).__init__()
self.add_transition(DependencyStage.DOWNLOADING, self._transition_from_DOWNLOADING)
self.add_terminal(DependencyStage.READY)
self.add_terminal(DependencyStage.FAILED)
self._state_committer = JsonStateCommitter(commit_file)
self._bundle_service = bundle_service
self._max_cache_size_bytes = max_cache_size_bytes
self.dependencies_dir = os.path.join(
worker_dir, LocalFileSystemDependencyManager.DEPENDENCIES_DIR_NAME
)
if not os.path.exists(self.dependencies_dir):
logger.info('{} doesn\'t exist, creating.'.format(self.dependencies_dir))
os.makedirs(self.dependencies_dir, 0o770)
# Locks for concurrency
self._dependency_locks = dict() # (parent_uuid, parent_path) -> threading.RLock
self._global_lock = threading.RLock() # Used for add/remove actions
self._paths_lock = threading.RLock() # Used for path name computations
# File paths that are currently being used to store dependencies. Used to prevent conflicts
self._paths = set()
# (parent_uuid, parent_path) -> DependencyState
self._dependencies = dict()
# (parent_uuid, parent_path) -> WorkerThread(thread, success, failure_message)
self._downloading = ThreadDict(fields={'success': False, 'failure_message': None})
self._load_state()
self._stop = False
self._main_thread = None
def __init__(
self,
worker, # type: Worker
image_manager, # type: DockerImageManager
dependency_manager, # type: LocalFileSystemDependencyManager
commit_file, # type: str
cpuset, # type: Set[str]
gpuset, # type: Set[str]
work_dir, # type: str
docker_runtime=docker_utils.DEFAULT_RUNTIME, # type: str
docker_network_prefix='codalab_worker_network', # type: str
):
self._worker = worker
self._state_committer = JsonStateCommitter(commit_file)
self._reader = LocalReader()
self._docker = docker.from_env()
self._bundles_dir = os.path.join(work_dir,
LocalRunManager.BUNDLES_DIR_NAME)
if not os.path.exists(self._bundles_dir):
logger.info('{} doesn\'t exist, creating.'.format(
self._bundles_dir))
os.makedirs(self._bundles_dir, 0o770)
self._image_manager = image_manager
self._dependency_manager = dependency_manager
self._cpuset = cpuset
self._gpuset = gpuset
self._stop = False
self._work_dir = work_dir
self._runs = {} # bundle_uuid -> LocalRunState
self._lock = threading.RLock()
self._init_docker_networks(docker_network_prefix)
self._run_state_manager = LocalRunStateMachine(
docker_image_manager=self._image_manager,
dependency_manager=self._dependency_manager,
worker_docker_network=self.worker_docker_network,
docker_network_internal=self.docker_network_internal,
docker_network_external=self.docker_network_external,
docker_runtime=docker_runtime,
upload_bundle_callback=self._worker.upload_bundle_contents,
assign_cpu_and_gpu_sets_fn=self.assign_cpu_and_gpu_sets,
)
def __init__(self, commit_file, max_image_cache_size):
"""
Initializes a DockerImageManager
:param commit_file: String path to where the state file should be committed
:param max_image_cache_size: Total size in bytes that the image cache can use
"""
self._state_committer = JsonStateCommitter(commit_file) # type: JsonStateCommitter
self._docker = docker.from_env() # type: DockerClient
self._image_cache = {} # type: Dict[str, ImageCacheEntry]
self._downloading = ThreadDict(
fields={'success': False, 'status': 'Download starting.'}, lock=True
)
self._max_image_cache_size = max_image_cache_size
self._lock = threading.RLock()
self._stop = False
self._sleep_secs = 10
self._cleanup_thread = None
self._load_state()
class JsonStateCommitterTest(unittest.TestCase):
def setUp(self):
self.test_dir = tempfile.mkdtemp()
self.state_file = 'test-state.json'
self.state_path = os.path.join(self.test_dir, self.state_file)
self.committer = JsonStateCommitter(self.state_path)
def tearDown(self):
try:
os.remove(self.state_path)
except OSError:
pass
os.rmdir(self.test_dir)
def test_path_parsing(self):
""" Simple test to ensure we don't mess up the state file path"""
self.assertEqual(self.committer._state_file, self.state_path)
def test_commit(self):
"""Make sure state is committed correctly"""
test_state = {'state': 'value'}
test_state_json_str = '{\"state\": \"value\"}'
self.committer.commit(test_state)
with open(self.state_path) as f:
self.assertEqual(test_state_json_str, f.read())
def test_load(self):
""" Make sure load loads the state file if it exists """
test_state = {'state': 'value'}
test_state_json_str = '{\"state\": \"value\"}'
with open(self.state_path, 'w') as f:
f.write(test_state_json_str)
loaded_state = self.committer.load()
self.assertDictEqual(test_state, loaded_state)
def test_default(self):
""" Make sure load with a default works if state file doesn't exist """
default_state = {'state': 'value'}
loaded_state = self.committer.load(default=default_state)
self.assertDictEqual(default_state, loaded_state)
def __init__(self, commit_file, max_image_cache_size):
"""
Initializes a DockerImageManager
:param commit_file: String path to where the state file should be committed
:param max_image_cache_size: Total size in bytes that the image cache can use
"""
self._state_committer = JsonStateCommitter(commit_file) # type: JsonStateCommitter
self._docker = docker.from_env() # type: DockerClient
self._image_cache = {} # type: Dict[str, ImageCacheEntry]
self._downloading = ThreadDict(
fields={'success': False, 'status': 'Download starting.'}, lock=True
)
self._max_image_cache_size = max_image_cache_size
self._lock = threading.RLock()
self._stop = False
self._sleep_secs = 10
self._cleanup_thread = None
self._load_state()
def __init__(
self,
worker, # type: Worker
image_manager, # type: DockerImageManager
dependency_manager, # type: LocalFileSystemDependencyManager
commit_file, # type: str
cpuset, # type: Set[str]
gpuset, # type: Set[str]
work_dir, # type: str
docker_runtime=docker_utils.DEFAULT_RUNTIME, # type: str
docker_network_prefix='codalab_worker_network', # type: str
):
self._worker = worker
self._state_committer = JsonStateCommitter(commit_file)
self._reader = LocalReader()
self._docker = docker.from_env()
self._bundles_dir = os.path.join(work_dir, LocalRunManager.BUNDLES_DIR_NAME)
if not os.path.exists(self._bundles_dir):
logger.info('{} doesn\'t exist, creating.'.format(self._bundles_dir))
os.makedirs(self._bundles_dir, 0o770)
self._image_manager = image_manager
self._dependency_manager = dependency_manager
self._cpuset = cpuset
self._gpuset = gpuset
self._stop = False
self._runs = {} # bundle_uuid -> LocalRunState
self._lock = threading.RLock()
self._init_docker_networks(docker_network_prefix)
self._run_state_manager = LocalRunStateMachine(
docker_image_manager=self._image_manager,
dependency_manager=self._dependency_manager,
worker_docker_network=self.worker_docker_network,
docker_network_internal=self.docker_network_internal,
docker_network_external=self.docker_network_external,
docker_runtime=docker_runtime,
upload_bundle_callback=self._worker.upload_bundle_contents,
assign_cpu_and_gpu_sets_fn=self.assign_cpu_and_gpu_sets,
)
class LocalFileSystemDependencyManager(StateTransitioner, BaseDependencyManager):
"""
This dependency manager downloads dependency bundles from Codalab server
to the local filesystem. It caches all downloaded dependencies but cleans up the
old ones if the disk use hits the given threshold
For this class dependencies are uniquely identified by (parent_uuid, parent_path)
"""
DEPENDENCIES_DIR_NAME = 'dependencies'
DEPENDENCY_FAILURE_COOLDOWN = 10
# TODO(bkgoksel): The server writes these to the worker_dependencies table, which stores the dependencies
# json as a SqlAlchemy LargeBinary, which defaults to MySQL BLOB, which has a size limit of
# 65K. For now we limit this value to about 58K to avoid any issues but we probably want to do
# something better (either specify MEDIUMBLOB in the SqlAlchemy definition of the table or change
# the data format of how we store this)
MAX_SERIALIZED_LEN = 60000
def __init__(self, commit_file, bundle_service, worker_dir, max_cache_size_bytes):
super(LocalFileSystemDependencyManager, self).__init__()
self.add_transition(DependencyStage.DOWNLOADING, self._transition_from_DOWNLOADING)
self.add_terminal(DependencyStage.READY)
self.add_terminal(DependencyStage.FAILED)
self._state_committer = JsonStateCommitter(commit_file)
self._bundle_service = bundle_service
self._max_cache_size_bytes = max_cache_size_bytes
self.dependencies_dir = os.path.join(
worker_dir, LocalFileSystemDependencyManager.DEPENDENCIES_DIR_NAME
)
if not os.path.exists(self.dependencies_dir):
logger.info('{} doesn\'t exist, creating.'.format(self.dependencies_dir))
os.makedirs(self.dependencies_dir, 0o770)
# Locks for concurrency
self._dependency_locks = dict() # (parent_uuid, parent_path) -> threading.RLock
self._global_lock = threading.RLock() # Used for add/remove actions
self._paths_lock = threading.RLock() # Used for path name computations
# File paths that are currently being used to store dependencies. Used to prevent conflicts
self._paths = set()
# (parent_uuid, parent_path) -> DependencyState
self._dependencies = dict()
# (parent_uuid, parent_path) -> WorkerThread(thread, success, failure_message)
self._downloading = ThreadDict(fields={'success': False, 'failure_message': None})
self._load_state()
self._stop = False
self._main_thread = None
def _save_state(self):
with self._global_lock, self._paths_lock:
self._state_committer.commit({'dependencies': self._dependencies, 'paths': self._paths})
def _load_state(self):
state = self._state_committer.load(default={'dependencies': {}, 'paths': set()})
dependencies = {}
dependency_locks = {}
paths = set()
for dep, dep_state in state['dependencies'].items():
full_path = os.path.join(self.dependencies_dir, dep_state.path)
if os.path.exists(full_path):
dependencies[dep] = dep_state
dependency_locks[dep] = threading.RLock()
else:
logger.info(
"Dependency {} in loaded state but its path {} doesn't exist in the filesystem".format(
dep, full_path
)
)
if dep_state.path not in state['paths']:
state['paths'].add(dep_state.path)
logger.info(
"Dependency {} in loaded state but its path {} is not in the loaded paths {}".format(
dep, dep_state.path, state['paths']
)
)
for path in state['paths']:
full_path = os.path.join(self.dependencies_dir, path)
if os.path.exists(full_path):
paths.add(path)
else:
logger.info(
"Path {} in loaded state but doesn't exist in the filesystem".format(full_path)
)
with self._global_lock, self._paths_lock:
self._dependencies = dependencies
self._dependency_locks = dependency_locks
self._paths = paths
logger.info(
'{} dependencies, {} paths in cache.'.format(len(self._dependencies), len(self._paths))
)
def start(self):
def loop(self):
while not self._stop:
try:
self._process_dependencies()
self._save_state()
self._cleanup()
self._save_state()
except Exception:
traceback.print_exc()
self._main_thread = threading.Thread(target=loop, args=[self])
self._main_thread.start()
def stop(self):
logger.info("Stopping local dependency manager")
self._stop = True
self._downloading.stop()
self._main_thread.join()
logger.info("Stopped local dependency manager. Exiting.")
def _process_dependencies(self):
for entry, state in self._dependencies.items():
with self._dependency_locks[entry]:
self._dependencies[entry] = self.transition(state)
def _prune_failed_dependencies(self):
"""
Prune failed dependencies older than 10 seconds so that further runs
get to retry the download. Without pruning any future run depending on a
failed dependency would automatically fail indefinitely.
"""
with self._global_lock:
self._acquire_all_locks()
failed_deps = {
dep: state
for dep, state in self._dependencies.items()
if state.stage == DependencyStage.FAILED
and time.time() - state.last_used
> LocalFileSystemDependencyManager.DEPENDENCY_FAILURE_COOLDOWN
}
for dependency, dependency_state in failed_deps.items():
self._delete_dependency(dependency)
self._release_all_locks()
def _cleanup(self):
"""
Prune failed dependencies older than 10 seconds
Limit the disk usage of the dependencies (both the bundle files and the serialized state file size)
Deletes oldest failed dependencies first and then oldest finished dependencies.
Doesn't touch downloading dependencies.
"""
self._prune_failed_dependencies()
# With all the locks (should be fast if no cleanup needed, otherwise make sure nothing is corrupted
while True:
with self._global_lock:
self._acquire_all_locks()
bytes_used = sum(dep.size_bytes for dep in self._dependencies.values())
serialized_length = len(codalabworker.pyjson.dumps(self._dependencies))
if (
bytes_used > self._max_cache_size_bytes
or serialized_length > LocalFileSystemDependencyManager.MAX_SERIALIZED_LEN
):
logger.debug(
'%d dependencies in cache, disk usage: %s (max %s), serialized size: %s (max %s)',
len(self._dependencies),
size_str(bytes_used),
size_str(self._max_cache_size_bytes),
size_str(serialized_length),
LocalFileSystemDependencyManager.MAX_SERIALIZED_LEN,
)
ready_deps = {
dep: state
for dep, state in self._dependencies.items()
if state.stage == DependencyStage.READY and not state.dependents
}
failed_deps = {
dep: state
for dep, state in self._dependencies.items()
if state.stage == DependencyStage.FAILED
}
if failed_deps:
dep_to_remove = min(
failed_deps.iteritems(), key=lambda dep_state: dep_state[1].last_used
)[0]
elif ready_deps:
dep_to_remove = min(
ready_deps.iteritems(), key=lambda dep_state: dep_state[1].last_used
)[0]
else:
logger.info(
'Dependency quota full but there are only downloading dependencies, not cleaning up until downloads are over'
)
break
if dep_to_remove:
self._delete_dependency(dep_to_remove)
self._release_all_locks()
else:
self._release_all_locks()
break
def _delete_dependency(self, dependency):
"""
Remove the given dependency from the manager's state
Also delete any known files on the filesystem if any exist
"""
if self._acquire_if_exists(dependency):
try:
path_to_remove = self._dependencies[dependency].path
self._paths.remove(path_to_remove)
remove_path(path_to_remove)
except Exception:
pass
finally:
del self._dependencies[dependency]
self._dependency_locks[dependency].release()
def has(self, dependency):
"""
Takes a dependency = (parent_uuid, parent_path)
Returns true if the manager has processed this dependency
"""
with self._global_lock:
return dependency in self._dependencies
def get(self, uuid, dependency):
"""
Request the dependency for the run with uuid, registering uuid as a dependent of this dependency
"""
now = time.time()
if not self._acquire_if_exists(dependency): # add dependency state if it does not exist
with self._global_lock:
self._dependency_locks[dependency] = threading.RLock()
self._dependency_locks[dependency].acquire()
self._dependencies[dependency] = DependencyState(
stage=DependencyStage.DOWNLOADING,
dependency=dependency,
path=self._assign_path(dependency),
size_bytes=0,
dependents=set([uuid]),
last_used=now,
message="Starting download",
killed=False,
)
# update last_used as long as it isn't in FAILED
if self._dependencies[dependency].stage != DependencyStage.FAILED:
self._dependencies[dependency].dependents.add(uuid)
self._dependencies[dependency] = self._dependencies[dependency]._replace(last_used=now)
self._dependency_locks[dependency].release()
return self._dependencies[dependency]
def release(self, uuid, dependency):
"""
Register that the run with uuid is no longer dependent on this dependency
If no more runs are dependent on this dependency, kill it
"""
if self._acquire_if_exists(dependency):
dep_state = self._dependencies[dependency]
if uuid in dep_state.dependents:
dep_state.dependents.remove(uuid)
if not dep_state.dependents:
dep_state = dep_state._replace(killed=True)
self._dependencies[dependency] = dep_state
self._dependency_locks[dependency].release()
def _acquire_if_exists(self, dependency):
"""
Safely acquires a lock for the given dependency if it exists
Returns True if depedendency exists, False otherwise
Callers should remember to release the lock
"""
with self._global_lock:
if dependency in self._dependencies:
self._dependency_locks[dependency].acquire()
return True
else:
return False
def _acquire_all_locks(self):
"""
Acquires all dependency locks in the thread it's called from
"""
with self._global_lock:
for dependency, lock in self._dependency_locks.iteritems():
lock.acquire()
def _release_all_locks(self):
"""
Releases all dependency locks in the thread it's called from
"""
with self._global_lock:
for dependency, lock in self._dependency_locks.iteritems():
lock.release()
def _assign_path(self, dependency):
"""
Normalize the path for the dependency by replacing / with _, avoiding conflicts
"""
parent_uuid, parent_path = dependency
if parent_path:
path = os.path.join(parent_uuid, parent_path)
else:
path = parent_uuid
path = path.replace(os.path.sep, '_')
# You could have a conflict between, for example a/b_c and
# a_b/c. We have to avoid those.
with self._paths_lock:
while path in self._paths:
path = path + '_'
self._paths.add(path)
return path
def _store_dependency(self, dependency_path, fileobj, target_type):
"""
Copy the dependency fileobj to its path in the local filesystem
Overwrite existing files by the same name if found
(may happen if filesystem modified outside the dependency manager,
for example during an update if the state gets reset but filesystem
doesn't get cleared)
"""
try:
if os.path.exists(dependency_path):
logger.info('Path %s already exists, overwriting', dependency_path)
if os.path.isdir(dependency_path):
shutil.rmtree(dependency_path)
else:
os.remove(dependency_path)
if target_type == 'directory':
un_tar_directory(fileobj, dependency_path, 'gz')
else:
with open(dependency_path, 'wb') as f:
logger.debug('copying file to %s', dependency_path)
shutil.copyfileobj(fileobj, f)
except Exception:
raise
@property
def all_dependencies(self):
with self._global_lock:
return list(self._dependencies.keys())
def _transition_from_DOWNLOADING(self, dependency_state):
def download():
def update_state_and_check_killed(bytes_downloaded):
"""
Callback method for bundle service client updates dependency state and
raises DownloadAbortedException if download is killed by dep. manager
"""
with self._dependency_locks[dependency]:
state = self._dependencies[dependency]
if state.killed:
raise DownloadAbortedException("Aborted by user")
self._dependencies[dependency] = state._replace(
size_bytes=bytes_downloaded,
message="Downloading dependency: %s downloaded"
% size_str(bytes_downloaded),
)
dependency_path = os.path.join(self.dependencies_dir, dependency_state.path)
logger.debug('Downloading dependency %s/%s', parent_uuid, parent_path)
try:
# Start async download to the fileobj
fileobj, target_type = self._bundle_service.get_bundle_contents(
parent_uuid, parent_path
)
with closing(fileobj):
# "Bug" the fileobj's read function so that we can keep
# track of the number of bytes downloaded so far.
old_read_method = fileobj.read
bytes_downloaded = [0]
def interruptable_read(*args, **kwargs):
data = old_read_method(*args, **kwargs)
bytes_downloaded[0] += len(data)
update_state_and_check_killed(bytes_downloaded[0])
return data
fileobj.read = interruptable_read
# Start copying the fileobj to filesystem dependency path
self._store_dependency(dependency_path, fileobj, target_type)
logger.debug(
'Finished downloading %s dependency %s/%s to %s',
target_type,
parent_uuid,
parent_path,
dependency_path,
)
with self._dependency_locks[dependency]:
self._downloading[dependency]['success'] = True
except Exception as e:
with self._dependency_locks[dependency]:
self._downloading[dependency]['success'] = False
self._downloading[dependency][
'failure_message'
] = "Dependency download failed: %s " % str(e)
dependency = dependency_state.dependency
parent_uuid, parent_path = dependency
self._downloading.add_if_new(dependency, threading.Thread(target=download, args=[]))
if self._downloading[dependency].is_alive():
return dependency_state
success = self._downloading[dependency]['success']
failure_message = self._downloading[dependency]['failure_message']
self._downloading.remove(dependency)
if success:
return dependency_state._replace(
stage=DependencyStage.READY, message="Download complete"
)
else:
with self._paths_lock:
self._paths.remove(dependency_state.path)
return dependency_state._replace(stage=DependencyStage.FAILED, message=failure_message)
class LocalFileSystemDependencyManager(StateTransitioner, BaseDependencyManager):
"""
This dependency manager downloads dependency bundles from Codalab server
to the local filesystem. It caches all downloaded dependencies but cleans up the
old ones if the disk use hits the given threshold
For this class dependencies are uniquely identified by (parent_uuid, parent_path)
"""
DEPENDENCIES_DIR_NAME = 'dependencies'
DEPENDENCY_FAILURE_COOLDOWN = 10
# TODO(bkgoksel): The server writes these to the worker_dependencies table, which stores the dependencies
# json as a SqlAlchemy LargeBinary, which defaults to MySQL BLOB, which has a size limit of
# 65K. For now we limit this value to about 58K to avoid any issues but we probably want to do
# something better (either specify MEDIUMBLOB in the SqlAlchemy definition of the table or change
# the data format of how we store this)
MAX_SERIALIZED_LEN = 60000
def __init__(self, commit_file, bundle_service, worker_dir, max_cache_size_bytes):
super(LocalFileSystemDependencyManager, self).__init__()
self.add_transition(DependencyStage.DOWNLOADING, self._transition_from_DOWNLOADING)
self.add_terminal(DependencyStage.READY)
self.add_terminal(DependencyStage.FAILED)
self._state_committer = JsonStateCommitter(commit_file)
self._bundle_service = bundle_service
self._max_cache_size_bytes = max_cache_size_bytes
self.dependencies_dir = os.path.join(
worker_dir, LocalFileSystemDependencyManager.DEPENDENCIES_DIR_NAME
)
if not os.path.exists(self.dependencies_dir):
logger.info('{} doesn\'t exist, creating.'.format(self.dependencies_dir))
os.makedirs(self.dependencies_dir, 0o770)
# Locks for concurrency
self._dependency_locks = dict() # (parent_uuid, parent_path) -> threading.RLock
self._global_lock = threading.RLock() # Used for add/remove actions
self._paths_lock = threading.RLock() # Used for path name computations
# File paths that are currently being used to store dependencies. Used to prevent conflicts
self._paths = set()
# (parent_uuid, parent_path) -> DependencyState
self._dependencies = dict()
# (parent_uuid, parent_path) -> WorkerThread(thread, success, failure_message)
self._downloading = ThreadDict(fields={'success': False, 'failure_message': None})
self._load_state()
self._stop = False
self._main_thread = None
def _save_state(self):
with self._global_lock, self._paths_lock:
self._state_committer.commit({'dependencies': self._dependencies, 'paths': self._paths})
def _load_state(self):
state = self._state_committer.load(default={'dependencies': {}, 'paths': set()})
dependencies = {}
dependency_locks = {}
paths = set()
for dep, dep_state in state['dependencies'].items():
full_path = os.path.join(self.dependencies_dir, dep_state.path)
if os.path.exists(full_path):
dependencies[dep] = dep_state
dependency_locks[dep] = threading.RLock()
else:
logger.info(
"Dependency {} in loaded state but its path {} doesn't exist in the filesystem".format(
dep, full_path
)
)
if dep_state.path not in state['paths']:
state['paths'].add(dep_state.path)
logger.info(
"Dependency {} in loaded state but its path {} is not in the loaded paths {}".format(
dep, dep_state.path, state['paths']
)
)
for path in state['paths']:
full_path = os.path.join(self.dependencies_dir, path)
if os.path.exists(full_path):
paths.add(path)
else:
logger.info(
"Path {} in loaded state but doesn't exist in the filesystem".format(full_path)
)
with self._global_lock, self._paths_lock:
self._dependencies = dependencies
self._dependency_locks = dependency_locks
self._paths = paths
logger.info(
'{} dependencies, {} paths in cache.'.format(len(self._dependencies), len(self._paths))
)
def start(self):
logger.info('Starting local dependency manager')
def loop(self):
while not self._stop:
try:
self._process_dependencies()
self._save_state()
self._cleanup()
self._save_state()
except Exception:
traceback.print_exc()
time.sleep(1)
self._main_thread = threading.Thread(target=loop, args=[self])
self._main_thread.start()
def stop(self):
logger.info('Stopping local dependency manager')
self._stop = True
self._downloading.stop()
self._main_thread.join()
logger.info('Stopped local dependency manager')
def _process_dependencies(self):
for entry, state in self._dependencies.items():
with self._dependency_locks[entry]:
self._dependencies[entry] = self.transition(state)
def _prune_failed_dependencies(self):
"""
Prune failed dependencies older than DEPENDENCY_FAILURE_COOLDOWN seconds so that further runs
get to retry the download. Without pruning, any future run depending on a
failed dependency would automatically fail indefinitely.
"""
with self._global_lock:
self._acquire_all_locks()
failed_deps = {
dep: state
for dep, state in self._dependencies.items()
if state.stage == DependencyStage.FAILED
and time.time() - state.last_used
> LocalFileSystemDependencyManager.DEPENDENCY_FAILURE_COOLDOWN
}
for dependency, dependency_state in failed_deps.items():
self._delete_dependency(dependency)
self._release_all_locks()
def _cleanup(self):
"""
Prune failed dependencies older than DEPENDENCY_FAILURE_COOLDOWN seconds.
Limit the disk usage of the dependencies (both the bundle files and the serialized state file size)
Deletes oldest failed dependencies first and then oldest finished dependencies.
Doesn't touch downloading dependencies.
"""
self._prune_failed_dependencies()
# With all the locks (should be fast if no cleanup needed, otherwise make sure nothing is corrupted
while True:
with self._global_lock:
self._acquire_all_locks()
bytes_used = sum(dep.size_bytes for dep in self._dependencies.values())
serialized_length = len(codalabworker.pyjson.dumps(self._dependencies))
if (
bytes_used > self._max_cache_size_bytes
or serialized_length > LocalFileSystemDependencyManager.MAX_SERIALIZED_LEN
):
logger.debug(
'%d dependencies in cache, disk usage: %s (max %s), serialized size: %s (max %s)',
len(self._dependencies),
size_str(bytes_used),
size_str(self._max_cache_size_bytes),
size_str(serialized_length),
LocalFileSystemDependencyManager.MAX_SERIALIZED_LEN,
)
ready_deps = {
dep: state
for dep, state in self._dependencies.items()
if state.stage == DependencyStage.READY and not state.dependents
}
failed_deps = {
dep: state
for dep, state in self._dependencies.items()
if state.stage == DependencyStage.FAILED
}
if failed_deps:
dep_to_remove = min(
failed_deps.iteritems(), key=lambda dep_state: dep_state[1].last_used
)[0]
elif ready_deps:
dep_to_remove = min(
ready_deps.iteritems(), key=lambda dep_state: dep_state[1].last_used
)[0]
else:
logger.info(
'Dependency quota full but there are only downloading dependencies, not cleaning up until downloads are over'
)
break
if dep_to_remove:
self._delete_dependency(dep_to_remove)
self._release_all_locks()
else:
self._release_all_locks()
break
def _delete_dependency(self, dependency):
"""
Remove the given dependency from the manager's state
Also delete any known files on the filesystem if any exist
"""
if self._acquire_if_exists(dependency):
try:
path_to_remove = self._dependencies[dependency].path
self._paths.remove(path_to_remove)
remove_path(path_to_remove)
except Exception:
pass
finally:
del self._dependencies[dependency]
self._dependency_locks[dependency].release()
def has(self, dependency):
"""
Takes a dependency = (parent_uuid, parent_path)
Returns true if the manager has processed this dependency
"""
with self._global_lock:
return dependency in self._dependencies
def get(self, uuid, dependency):
"""
Request the dependency for the run with uuid, registering uuid as a dependent of this dependency
"""
now = time.time()
if not self._acquire_if_exists(dependency): # add dependency state if it does not exist
with self._global_lock:
self._dependency_locks[dependency] = threading.RLock()
self._dependency_locks[dependency].acquire()
self._dependencies[dependency] = DependencyState(
stage=DependencyStage.DOWNLOADING,
dependency=dependency,
path=self._assign_path(dependency),
size_bytes=0,
dependents=set([uuid]),
last_used=now,
message="Starting download",
killed=False,
)
# update last_used as long as it isn't in FAILED
if self._dependencies[dependency].stage != DependencyStage.FAILED:
self._dependencies[dependency].dependents.add(uuid)
self._dependencies[dependency] = self._dependencies[dependency]._replace(last_used=now)
self._dependency_locks[dependency].release()
return self._dependencies[dependency]
def release(self, uuid, dependency):
"""
Register that the run with uuid is no longer dependent on this dependency
If no more runs are dependent on this dependency, kill it
"""
if self._acquire_if_exists(dependency):
dep_state = self._dependencies[dependency]
if uuid in dep_state.dependents:
dep_state.dependents.remove(uuid)
if not dep_state.dependents:
dep_state = dep_state._replace(killed=True)
self._dependencies[dependency] = dep_state
self._dependency_locks[dependency].release()
def _acquire_if_exists(self, dependency):
"""
Safely acquires a lock for the given dependency if it exists
Returns True if depedendency exists, False otherwise
Callers should remember to release the lock
"""
with self._global_lock:
if dependency in self._dependencies:
self._dependency_locks[dependency].acquire()
return True
else:
return False
def _acquire_all_locks(self):
"""
Acquires all dependency locks in the thread it's called from
"""
with self._global_lock:
for dependency, lock in self._dependency_locks.iteritems():
lock.acquire()
def _release_all_locks(self):
"""
Releases all dependency locks in the thread it's called from
"""
with self._global_lock:
for dependency, lock in self._dependency_locks.iteritems():
lock.release()
def _assign_path(self, dependency):
"""
Normalize the path for the dependency by replacing / with _, avoiding conflicts
"""
parent_uuid, parent_path = dependency
if parent_path:
path = os.path.join(parent_uuid, parent_path)
else:
path = parent_uuid
path = path.replace(os.path.sep, '_')
# You could have a conflict between, for example a/b_c and
# a_b/c. We have to avoid those.
with self._paths_lock:
while path in self._paths:
path = path + '_'
self._paths.add(path)
return path
def _store_dependency(self, dependency_path, fileobj, target_type):
"""
Copy the dependency fileobj to its path in the local filesystem
Overwrite existing files by the same name if found
(may happen if filesystem modified outside the dependency manager,
for example during an update if the state gets reset but filesystem
doesn't get cleared)
"""
try:
if os.path.exists(dependency_path):
logger.info('Path %s already exists, overwriting', dependency_path)
if os.path.isdir(dependency_path):
shutil.rmtree(dependency_path)
else:
os.remove(dependency_path)
if target_type == 'directory':
un_tar_directory(fileobj, dependency_path, 'gz')
else:
with open(dependency_path, 'wb') as f:
logger.debug('copying file to %s', dependency_path)
shutil.copyfileobj(fileobj, f)
except Exception:
raise
@property
def all_dependencies(self):
with self._global_lock:
return list(self._dependencies.keys())
def _transition_from_DOWNLOADING(self, dependency_state):
def download():
def update_state_and_check_killed(bytes_downloaded):
"""
Callback method for bundle service client updates dependency state and
raises DownloadAbortedException if download is killed by dep. manager
"""
with self._dependency_locks[dependency]:
state = self._dependencies[dependency]
if state.killed:
raise DownloadAbortedException("Aborted by user")
self._dependencies[dependency] = state._replace(
size_bytes=bytes_downloaded,
message="Downloading dependency: %s downloaded"
% size_str(bytes_downloaded),
)
dependency_path = os.path.join(self.dependencies_dir, dependency_state.path)
logger.debug('Downloading dependency %s/%s', parent_uuid, parent_path)
try:
# Start async download to the fileobj
fileobj, target_type = self._bundle_service.get_bundle_contents(
parent_uuid, parent_path
)
with closing(fileobj):
# "Bug" the fileobj's read function so that we can keep
# track of the number of bytes downloaded so far.
old_read_method = fileobj.read
bytes_downloaded = [0]
def interruptable_read(*args, **kwargs):
data = old_read_method(*args, **kwargs)
bytes_downloaded[0] += len(data)
update_state_and_check_killed(bytes_downloaded[0])
return data
fileobj.read = interruptable_read
# Start copying the fileobj to filesystem dependency path
self._store_dependency(dependency_path, fileobj, target_type)
logger.debug(
'Finished downloading %s dependency %s/%s to %s',
target_type,
parent_uuid,
parent_path,
dependency_path,
)
with self._dependency_locks[dependency]:
self._downloading[dependency]['success'] = True
except Exception as e:
with self._dependency_locks[dependency]:
self._downloading[dependency]['success'] = False
self._downloading[dependency][
'failure_message'
] = "Dependency download failed: %s " % str(e)
dependency = dependency_state.dependency
parent_uuid, parent_path = dependency
self._downloading.add_if_new(dependency, threading.Thread(target=download, args=[]))
if self._downloading[dependency].is_alive():
return dependency_state
success = self._downloading[dependency]['success']
failure_message = self._downloading[dependency]['failure_message']
self._downloading.remove(dependency)
if success:
return dependency_state._replace(
stage=DependencyStage.READY, message="Download complete"
)
else:
with self._paths_lock:
self._paths.remove(dependency_state.path)
return dependency_state._replace(stage=DependencyStage.FAILED, message=failure_message)
class LocalRunManager(BaseRunManager):
"""
LocalRunManager executes the runs locally, each one in its own Docker
container. It manages its cache of local Docker images and its own local
Docker network.
"""
# Network buffer size to use while proxying with netcat
NETCAT_BUFFER_SIZE = 4096
# Number of seconds to wait for bundle kills to propagate before forcing kill
KILL_TIMEOUT = 100
# Directory name to store running bundles in worker filesystem
BUNDLES_DIR_NAME = 'runs'
def __init__(
self,
worker, # type: Worker
image_manager, # type: DockerImageManager
dependency_manager, # type: LocalFileSystemDependencyManager
commit_file, # type: str
cpuset, # type: Set[str]
gpuset, # type: Set[str]
work_dir, # type: str
docker_runtime=docker_utils.DEFAULT_RUNTIME, # type: str
docker_network_prefix='codalab_worker_network', # type: str
):
self._worker = worker
self._state_committer = JsonStateCommitter(commit_file)
self._reader = LocalReader()
self._docker = docker.from_env()
self._bundles_dir = os.path.join(work_dir,
LocalRunManager.BUNDLES_DIR_NAME)
if not os.path.exists(self._bundles_dir):
logger.info('{} doesn\'t exist, creating.'.format(
self._bundles_dir))
os.makedirs(self._bundles_dir, 0o770)
self._image_manager = image_manager
self._dependency_manager = dependency_manager
self._cpuset = cpuset
self._gpuset = gpuset
self._stop = False
self._work_dir = work_dir
self._runs = {} # bundle_uuid -> LocalRunState
self._lock = threading.RLock()
self._init_docker_networks(docker_network_prefix)
self._run_state_manager = LocalRunStateMachine(
docker_image_manager=self._image_manager,
dependency_manager=self._dependency_manager,
worker_docker_network=self.worker_docker_network,
docker_network_internal=self.docker_network_internal,
docker_network_external=self.docker_network_external,
docker_runtime=docker_runtime,
upload_bundle_callback=self._worker.upload_bundle_contents,
assign_cpu_and_gpu_sets_fn=self.assign_cpu_and_gpu_sets,
)
def _init_docker_networks(self, docker_network_prefix):
"""
Set up docker networks for runs: one with external network access and one without
"""
def create_or_get_network(name, internal):
try:
logger.debug('Creating docker network %s', name)
return self._docker.networks.create(name,
internal=internal,
check_duplicate=True)
except docker.errors.APIError:
logger.debug('Network %s already exists, reusing', name)
return self._docker.networks.list(names=[name])[0]
self.worker_docker_network = create_or_get_network(
docker_network_prefix, True)
self.docker_network_external = create_or_get_network(
docker_network_prefix + "_ext", False)
self.docker_network_internal = create_or_get_network(
docker_network_prefix + "_int", True)
def save_state(self):
# Remove complex container objects from state before serializing, these can be retrieved
simple_runs = {
uuid: state._replace(container=None)
for uuid, state in self._runs.items()
}
self._state_committer.commit(simple_runs)
def load_state(self):
runs = self._state_committer.load()
# Retrieve the complex container objects from the Docker API
for uuid, run_state in runs.items():
if run_state.container_id:
try:
run_state = run_state._replace(
container=self._docker.containers.get(
run_state.container_id))
except docker.errors.NotFound as ex:
logger.debug('Error getting the container for the run: %s',
ex)
run_state = run_state._replace(container_id=None)
finally:
self._runs[uuid] = run_state
def start(self):
"""
Load your state from disk, and start your sub-managers
"""
self.load_state()
self._image_manager.start()
self._dependency_manager.start()
def stop(self):
"""
Starts any necessary cleanup and propagates to its other managers
Blocks until cleanup is complete and it is safe to quit
"""
logger.info("Stopping Local Run Manager")
self._stop = True
self._image_manager.stop()
self._dependency_manager.stop()
self._run_state_manager.stop()
self.save_state()
try:
self.docker_network_internal.remove()
self.docker_network_external.remove()
except docker.errors.APIError as e:
logger.error("Cannot clear docker networks: {}".format(str(e)))
logger.info("Stopped Local Run Manager. Exiting")
def kill_all(self):
"""
Kills all runs
"""
logger.debug("Killing all bundles")
# Set all bundle statuses to killed
with self._lock:
for uuid in self._runs.keys():
run_state = self._runs[uuid]
run_state.info['kill_message'] = 'Worker stopped'
run_state = run_state._replace(info=run_state.info,
is_killed=True)
self._runs[uuid] = run_state
# Wait until all runs finished or KILL_TIMEOUT seconds pas
for attempt in range(LocalRunManager.KILL_TIMEOUT):
with self._lock:
self._runs = {
k: v
for k, v in self._runs.items()
if v.stage != LocalRunStage.FINISHED
}
if len(self._runs) > 0:
logger.debug(
"Waiting for {} more bundles. {} seconds until force quit."
.format(len(self._runs),
LocalRunManager.KILL_TIMEOUT - attempt))
time.sleep(1)
def process_runs(self):
""" Transition each run then filter out finished runs """
with self._lock:
# transition all runs
for bundle_uuid in self._runs.keys():
run_state = self._runs[bundle_uuid]
self._runs[bundle_uuid] = self._run_state_manager.transition(
run_state)
# filter out finished runs
finished_container_ids = [
run.container for run in self._runs.values()
if (run.stage == LocalRunStage.FINISHED or run.stage ==
LocalRunStage.FINALIZING) and run.container_id is not None
]
for container_id in finished_container_ids:
try:
container = self._docker.containers.get(container_id)
container.remove(force=True)
except (docker.errors.NotFound, docker.errors.NullResource):
pass
self._runs = {
k: v
for k, v in self._runs.items()
if v.stage != LocalRunStage.FINISHED
}
def create_run(self, bundle, resources):
"""
Creates and starts processing a new run with the given bundle and
resources
"""
if self._stop:
# Run Manager stopped, refuse more runs
return
bundle_uuid = bundle['uuid']
bundle_path = os.path.join(self._bundles_dir, bundle_uuid)
now = time.time()
run_state = LocalRunState(
stage=LocalRunStage.PREPARING,
run_status='',
bundle=bundle,
bundle_path=os.path.realpath(bundle_path),
resources=resources,
start_time=now,
container_id=None,
container=None,
docker_image=None,
is_killed=False,
has_contents=False,
cpuset=None,
gpuset=None,
time_used=0,
max_memory=0,
disk_utilization=0,
info={},
)
with self._lock:
self._runs[bundle_uuid] = run_state
def assign_cpu_and_gpu_sets(self, request_cpus, request_gpus):
"""
Propose a cpuset and gpuset to a bundle based on given requested resources.
Note: no side effects (this is important: we don't want to maintain more state than necessary)
Arguments:
request_cpus: integer
request_gpus: integer
Returns a 2-tuple:
cpuset: assigned cpuset (str indices).
gpuset: assigned gpuset (str indices).
Throws an exception if unsuccessful.
"""
cpuset, gpuset = set(self._cpuset), set(self._gpuset)
with self._lock:
for run_state in self._runs.values():
if run_state.stage == LocalRunStage.RUNNING:
cpuset -= run_state.cpuset
gpuset -= run_state.gpuset
if len(cpuset) < request_cpus or len(gpuset) < request_gpus:
raise Exception("Not enough cpus or gpus to assign!")
def propose_set(resource_set, request_count):
return set(str(el) for el in list(resource_set)[:request_count])
return propose_set(cpuset,
request_cpus), propose_set(gpuset, request_gpus)
def get_run(self, uuid):
"""
Returns the state of the run with the given UUID if it is managed
by this RunManager, returns None otherwise
"""
with self._lock:
return self._runs.get(uuid, None)
def mark_finalized(self, uuid):
"""
Marks the run as finalized server-side so it can be discarded
"""
if uuid in self._runs:
with self._lock:
self._runs[uuid].info['finalized'] = True
def read(self, run_state, path, dep_paths, args, reply):
"""
Use your Reader helper to invoke the given read command
"""
self._reader.read(run_state, path, dep_paths, args, reply)
def write(self, run_state, path, dep_paths, string):
"""
Write string to path in bundle with uuid
"""
if os.path.normpath(path) in dep_paths:
return
with open(os.path.join(run_state.bundle_path, path), 'w') as f:
f.write(string)
def netcat(self, run_state, port, message, reply):
"""
Write message to port of bundle with uuid and read the response.
Returns a stream with the response contents
"""
container_ip = docker_utils.get_container_ip(
self.worker_docker_network.name, run_state.container)
s = socket.socket(socket.AF_INET, socket.SOCK_STREAM)
s.connect((container_ip, port))
s.sendall(message)
total_data = []
while True:
data = s.recv(LocalRunManager.NETCAT_BUFFER_SIZE)
if not data:
break
total_data.append(data)
s.close()
reply(None, {}, b''.join(total_data).decode())
def kill(self, run_state):
"""
Kill bundle with uuid
"""
with self._lock:
run_state.info['kill_message'] = 'Kill requested'
run_state = run_state._replace(info=run_state.info, is_killed=True)
self._runs[run_state.bundle['uuid']] = run_state
@property
def all_runs(self):
"""
Returns a list of all the runs managed by this RunManager
"""
with self._lock:
result = {
bundle_uuid: {
'run_status':
run_state.run_status,
'start_time':
run_state.start_time,
'docker_image':
run_state.docker_image,
'info':
run_state.info,
'state':
LocalRunStage.WORKER_STATE_TO_SERVER_STATE[
run_state.stage],
'remote':
self._worker.id,
}
for bundle_uuid, run_state in self._runs.items()
}
return result
@property
def all_dependencies(self):
"""
Returns a list of all dependencies available in this RunManager
"""
return self._dependency_manager.all_dependencies
@property
def cpus(self):
"""
Total number of CPUs this RunManager has
"""
return len(self._cpuset)
@property
def gpus(self):
"""
Total number of GPUs this RunManager has
"""
return len(self._gpuset)
@property
def memory_bytes(self):
"""
Total installed memory of this RunManager
"""
try:
return os.sysconf('SC_PAGE_SIZE') * os.sysconf('SC_PHYS_PAGES')
except ValueError:
# Fallback to sysctl when os.sysconf('SC_PHYS_PAGES') fails on OS X
return int(check_output(['sysctl', '-n', 'hw.memsize']).strip())
@property
def free_disk_bytes(self):
"""
Available disk space by bytes of this RunManager.
"""
error_msg = "Failed to run command {}".format("df " + self._work_dir)
try:
p = Popen(["df", self._work_dir], stdout=PIPE)
output, error = p.communicate()
# Return None when there is an error.
if error:
logger.error(error.strip())
return None
if output:
lines = output.decode().split("\n")
index = lines[0].split().index("Available")
# We convert the original result from df command in unit of 1KB blocks into bytes.
return int(lines[1].split()[index]) * 1024
except Exception as e:
logger.error("{}: {}".format(error_msg, str(e)))
return None
class DockerImageManager:
def __init__(self, commit_file, max_image_cache_size):
"""
Initializes a DockerImageManager
:param commit_file: String path to where the state file should be committed
:param max_image_cache_size: Total size in bytes that the image cache can use
"""
self._state_committer = JsonStateCommitter(commit_file) # type: JsonStateCommitter
self._docker = docker.from_env() # type: DockerClient
self._image_cache = {} # type: Dict[str, ImageCacheEntry]
self._downloading = ThreadDict(
fields={'success': False, 'status': 'Download starting.'}, lock=True
)
self._max_image_cache_size = max_image_cache_size
self._lock = threading.RLock()
self._stop = False
self._sleep_secs = 10
self._cleanup_thread = None
self._load_state()
def _save_state(self):
with self._lock:
self._state_committer.commit(self._image_cache)
def _load_state(self):
with self._lock:
self._image_cache = self._state_committer.load()
def start(self):
if self._max_image_cache_size:
def cleanup_loop(self):
while not self._stop:
try:
self._cleanup()
self._save_state()
except Exception:
traceback.print_exc()
time.sleep(self._sleep_secs)
self._cleanup_thread = threading.Thread(target=cleanup_loop, args=[self])
self._cleanup_thread.start()
def stop(self):
logger.info("Stopping docker image manager")
self._stop = True
logger.debug("Stopping docker image manager: stop the downloads threads")
self._downloading.stop()
if self._cleanup_thread:
logger.debug("Stopping docker image manager: stop the cleanup thread")
self._cleanup_thread.join()
logger.info("Stopped docker image manager.")
def _cleanup(self):
"""
Prunes the image cache for runs
1. Only care about images we (this DockerImageManager) downloaded and know about
2. We use sum of VirtualSize's, which is an upper bound on the disk use of our images:
in case no images share any intermediate layers, this will be the real disk use,
however if images share layers, the virtual size will count that layer's size for each
image that uses it, even though it's stored only once in the disk. The 'Size' field
accounts for the marginal size each image adds on top of the shared layers, but summing
those is not accurate either since the shared base layers need to be counted once to get
the total size. (i.e. summing marginal sizes would give us a lower bound on the total disk
use of images). Calling df gives us an accurate disk use of ALL the images on the machine
but because of (1) we don't want to use that.
"""
while not self._stop:
time.sleep(self._sleep_secs)
deletable_entries = set(self._image_cache.values())
disk_use = sum(cache_entry.virtual_size for cache_entry in deletable_entries)
while disk_use > self._max_image_cache_size:
entry_to_remove = min(deletable_entries, key=lambda entry: entry.last_used)
logger.info(
'Disk use (%s) > max cache size (%s), pruning image: %s',
disk_use,
self._max_image_cache_size,
entry_to_remove.digest,
)
try:
image_to_delete = self._docker.images.get(entry_to_remove.id)
tags_to_delete = image_to_delete.tags
for tag in tags_to_delete:
self._docker.images.remove(tag)
# if we successfully removed the image also remove its cache entry
del self._image_cache[entry_to_remove.digest]
except docker.errors.NotFound:
# image doesn't exist anymore for some reason, stop tracking it
del self._image_cache[entry_to_remove.digest]
except docker.errors.APIError as err:
# Maybe we can't delete this image because its container is still running
# (think a run that takes 4 days so this is the oldest image but still in use)
# In that case we just continue with our lives, hoping it will get deleted once
# it's no longer in use and the cache becomes full again
logger.error(
"Cannot remove image %s from cache: %s", entry_to_remove.digest, err
)
deletable_entries.remove(entry_to_remove)
disk_use = sum(entry.virtual_size for entry in deletable_entries)
logger.debug("Stopping docker image manager cleanup")
def get(self, image_spec):
"""
Request the docker image for the run with uuid, registering uuid as a dependent of this docker image
:param image_spec: Repo image_spec of docker image being requested
:returns: A DockerAvailabilityState object with the state of the docker image
"""
if ':' not in image_spec:
# Both digests and repo:tag kind of specs include the : character. The only case without it is when
# a repo is specified without a tag (like 'latest')
# When this is the case, different images API methods act differently:
# - pull pulls all tags of the image
# - get tries to get `latest` by default
# That means if someone requests a docker image without a tag, and the image does not have a latest
# tag pushed to Dockerhub, pull will succeed since it will pull all other tags, but later get calls
# will fail since the `latest` tag won't be found on the system.
# We don't want to assume what tag the user wanted so we want the pull step to fail if no tag is specified
# and there's no latest tag on dockerhub.
# Hence, we append the latest tag to the image spec if there's no tag specified otherwise at the very beginning
image_spec += ':latest'
try:
image = self._docker.images.get(image_spec)
digest = image.attrs.get('RepoDigests', [image_spec])[0]
with self._lock:
self._image_cache[digest] = ImageCacheEntry(
id=image.id,
digest=digest,
last_used=time.time(),
virtual_size=image.attrs['VirtualSize'],
marginal_size=image.attrs['Size'],
)
# We can remove the download thread if it still exists
if image_spec in self._downloading:
self._downloading.remove(image_spec)
return ImageAvailabilityState(
digest=digest, stage=DependencyStage.READY, message='Image ready'
)
except docker.errors.ImageNotFound:
return self._pull_or_report(image_spec) # type: DockerAvailabilityState
except Exception as ex:
return ImageAvailabilityState(
digest=None, stage=DependencyStage.FAILED, message=str(ex)
)
def _pull_or_report(self, image_spec):
if image_spec in self._downloading:
with self._downloading[image_spec]['lock']:
if self._downloading[image_spec].is_alive():
return ImageAvailabilityState(
digest=None,
stage=DependencyStage.DOWNLOADING,
message=self._downloading[image_spec]['status'],
)
else:
if self._downloading[image_spec]['success']:
digest = self._docker.images.get(image_spec).attrs.get(
'RepoDigests', [image_spec]
)[0]
status = ImageAvailabilityState(
digest=digest,
stage=DependencyStage.READY,
message=self._downloading[image_spec]['message'],
)
else:
status = ImageAvailabilityState(
digest=None,
stage=DependencyStage.FAILED,
message=self._downloading[image_spec]['message'],
)
self._downloading.remove(image_spec)
return status
else:
def download():
logger.debug('Downloading Docker image %s', image_spec)
try:
self._docker.images.pull(image_spec)
logger.debug('Download for Docker image %s complete', image_spec)
self._downloading[image_spec]['success'] = True
self._downloading[image_spec]['message'] = "Downloading image"
except (docker.errors.APIError, docker.errors.ImageNotFound) as ex:
logger.debug('Download for Docker image %s failed: %s', image_spec, ex)
self._downloading[image_spec]['success'] = False
self._downloading[image_spec]['message'] = "Can't download image: {}".format(ex)
self._downloading.add_if_new(image_spec, threading.Thread(target=download, args=[]))
return ImageAvailabilityState(
digest=None,
stage=DependencyStage.DOWNLOADING,
message=self._downloading[image_spec]['status'],
)
class DockerImageManager:
def __init__(self, commit_file, max_image_cache_size):
"""
Initializes a DockerImageManager
:param commit_file: String path to where the state file should be committed
:param max_image_cache_size: Total size in bytes that the image cache can use
"""
self._state_committer = JsonStateCommitter(
commit_file) # type: JsonStateCommitter
self._docker = docker.from_env() # type: DockerClient
self._image_cache = {} # type: Dict[str, ImageCacheEntry]
self._downloading = ThreadDict(fields={
'success': False,
'status': 'Download starting.'
},
lock=True)
self._max_image_cache_size = max_image_cache_size
self._lock = threading.RLock()
self._stop = False
self._sleep_secs = 10
self._cleanup_thread = None
self._load_state()
def _save_state(self):
with self._lock:
self._state_committer.commit(self._image_cache)
def _load_state(self):
with self._lock:
self._image_cache = self._state_committer.load()
def start(self):
if self._max_image_cache_size:
def cleanup_loop(self):
while not self._stop:
try:
self._cleanup()
self._save_state()
except Exception:
traceback.print_exc()
time.sleep(self._sleep_secs)
self._cleanup_thread = threading.Thread(target=cleanup_loop,
args=[self])
self._cleanup_thread.start()
def stop(self):
logger.info("Stopping docker image manager")
self._stop = True
logger.debug(
"Stopping docker image manager: stop the downloads threads")
self._downloading.stop()
if self._cleanup_thread:
logger.debug(
"Stopping docker image manager: stop the cleanup thread")
self._cleanup_thread.join()
logger.info("Stopped docker image manager.")
def _cleanup(self):
"""
Prunes the image cache for runs
1. Only care about images we (this DockerImageManager) downloaded and know about
2. We use sum of VirtualSize's, which is an upper bound on the disk use of our images:
in case no images share any intermediate layers, this will be the real disk use,
however if images share layers, the virtual size will count that layer's size for each
image that uses it, even though it's stored only once in the disk. The 'Size' field
accounts for the marginal size each image adds on top of the shared layers, but summing
those is not accurate either since the shared base layers need to be counted once to get
the total size. (i.e. summing marginal sizes would give us a lower bound on the total disk
use of images). Calling df gives us an accurate disk use of ALL the images on the machine
but because of (1) we don't want to use that.
"""
while not self._stop:
time.sleep(self._sleep_secs)
deletable_entries = set(self._image_cache.values())
disk_use = sum(cache_entry.virtual_size
for cache_entry in deletable_entries)
while disk_use > self._max_image_cache_size:
entry_to_remove = min(deletable_entries,
key=lambda entry: entry.last_used)
logger.info(
'Disk use (%s) > max cache size (%s), pruning image: %s',
disk_use,
self._max_image_cache_size,
entry_to_remove.digest,
)
try:
image_to_delete = self._docker.images.get(
entry_to_remove.id)
tags_to_delete = image_to_delete.tags
for tag in tags_to_delete:
self._docker.images.remove(tag)
# if we successfully removed the image also remove its cache entry
del self._image_cache[entry_to_remove.digest]
except docker.errors.NotFound:
# image doesn't exist anymore for some reason, stop tracking it
del self._image_cache[entry_to_remove.digest]
except docker.errors.APIError as err:
# Maybe we can't delete this image because its container is still running
# (think a run that takes 4 days so this is the oldest image but still in use)
# In that case we just continue with our lives, hoping it will get deleted once
# it's no longer in use and the cache becomes full again
logger.error("Cannot remove image %s from cache: %s",
entry_to_remove.digest, err)
deletable_entries.remove(entry_to_remove)
disk_use = sum(entry.virtual_size
for entry in deletable_entries)
logger.debug("Stopping docker image manager cleanup")
def get(self, image_spec):
"""
Request the docker image for the run with uuid, registering uuid as a dependent of this docker image
:param image_spec: Repo image_spec of docker image being requested
:returns: A DockerAvailabilityState object with the state of the docker image
"""
if ':' not in image_spec:
# Both digests and repo:tag kind of specs include the : character. The only case without it is when
# a repo is specified without a tag (like 'latest')
# When this is the case, different images API methods act differently:
# - pull pulls all tags of the image
# - get tries to get `latest` by default
# That means if someone requests a docker image without a tag, and the image does not have a latest
# tag pushed to Dockerhub, pull will succeed since it will pull all other tags, but later get calls
# will fail since the `latest` tag won't be found on the system.
# We don't want to assume what tag the user wanted so we want the pull step to fail if no tag is specified
# and there's no latest tag on dockerhub.
# Hence, we append the latest tag to the image spec if there's no tag specified otherwise at the very beginning
image_spec += ':latest'
try:
image = self._docker.images.get(image_spec)
digest = image.attrs.get('RepoDigests', [image_spec])[0]
with self._lock:
self._image_cache[digest] = ImageCacheEntry(
id=image.id,
digest=digest,
last_used=time.time(),
virtual_size=image.attrs['VirtualSize'],
marginal_size=image.attrs['Size'],
)
# We can remove the download thread if it still exists
if image_spec in self._downloading:
self._downloading.remove(image_spec)
return ImageAvailabilityState(digest=digest,
stage=DependencyStage.READY,
message='Image ready')
except docker.errors.ImageNotFound:
return self._pull_or_report(
image_spec) # type: DockerAvailabilityState
except Exception as ex:
return ImageAvailabilityState(digest=None,
stage=DependencyStage.FAILED,
message=str(ex))
def _pull_or_report(self, image_spec):
if image_spec in self._downloading:
with self._downloading[image_spec]['lock']:
if self._downloading[image_spec].is_alive():
return ImageAvailabilityState(
digest=None,
stage=DependencyStage.DOWNLOADING,
message=self._downloading[image_spec]['status'],
)
else:
if self._downloading[image_spec]['success']:
digest = self._docker.images.get(image_spec).attrs.get(
'RepoDigests', [image_spec])[0]
status = ImageAvailabilityState(
digest=digest,
stage=DependencyStage.READY,
message=self._downloading[image_spec]['message'],
)
else:
status = ImageAvailabilityState(
digest=None,
stage=DependencyStage.FAILED,
message=self._downloading[image_spec]['message'],
)
self._downloading.remove(image_spec)
return status
else:
def download():
logger.debug('Downloading Docker image %s', image_spec)
try:
self._docker.images.pull(image_spec)
logger.debug('Download for Docker image %s complete',
image_spec)
self._downloading[image_spec]['success'] = True
self._downloading[image_spec][
'message'] = "Downloading image"
except (docker.errors.APIError,
docker.errors.ImageNotFound) as ex:
logger.debug('Download for Docker image %s failed: %s',
image_spec, ex)
self._downloading[image_spec]['success'] = False
self._downloading[image_spec][
'message'] = "Can't download image: {}".format(ex)
self._downloading.add_if_new(
image_spec, threading.Thread(target=download, args=[]))
return ImageAvailabilityState(
digest=None,
stage=DependencyStage.DOWNLOADING,
message=self._downloading[image_spec]['status'],
)
def setUp(self):
self.test_dir = tempfile.mkdtemp()
self.state_file = 'test-state.json'
self.state_path = os.path.join(self.test_dir, self.state_file)
self.committer = JsonStateCommitter(self.state_path)
class LocalRunManager(BaseRunManager):
"""
LocalRunManager executes the runs locally, each one in its own Docker
container. It manages its cache of local Docker images and its own local
Docker network.
"""
# Network buffer size to use while proxying with netcat
NETCAT_BUFFER_SIZE = 4096
# Number of seconds to wait for bundle kills to propagate before forcing kill
KILL_TIMEOUT = 100
# Directory name to store running bundles in worker filesystem
BUNDLES_DIR_NAME = 'runs'
def __init__(
self,
worker, # type: Worker
image_manager, # type: DockerImageManager
dependency_manager, # type: LocalFileSystemDependencyManager
commit_file, # type: str
cpuset, # type: Set[str]
gpuset, # type: Set[str]
work_dir, # type: str
docker_runtime=docker_utils.DEFAULT_RUNTIME, # type: str
docker_network_prefix='codalab_worker_network', # type: str
):
self._worker = worker
self._state_committer = JsonStateCommitter(commit_file)
self._reader = LocalReader()
self._docker = docker.from_env()
self._bundles_dir = os.path.join(work_dir, LocalRunManager.BUNDLES_DIR_NAME)
if not os.path.exists(self._bundles_dir):
logger.info('{} doesn\'t exist, creating.'.format(self._bundles_dir))
os.makedirs(self._bundles_dir, 0o770)
self._image_manager = image_manager
self._dependency_manager = dependency_manager
self._cpuset = cpuset
self._gpuset = gpuset
self._stop = False
self._runs = {} # bundle_uuid -> LocalRunState
self._lock = threading.RLock()
self._init_docker_networks(docker_network_prefix)
self._run_state_manager = LocalRunStateMachine(
docker_image_manager=self._image_manager,
dependency_manager=self._dependency_manager,
worker_docker_network=self.worker_docker_network,
docker_network_internal=self.docker_network_internal,
docker_network_external=self.docker_network_external,
docker_runtime=docker_runtime,
upload_bundle_callback=self._worker.upload_bundle_contents,
assign_cpu_and_gpu_sets_fn=self.assign_cpu_and_gpu_sets,
)
def _init_docker_networks(self, docker_network_prefix):
"""
Set up docker networks for runs: one with external network access and one without
"""
def create_or_get_network(name, internal):
try:
logger.debug('Creating docker network %s', name)
return self._docker.networks.create(name, internal=internal, check_duplicate=True)
except docker.errors.APIError:
logger.debug('Network %s already exists, reusing', name)
return self._docker.networks.list(names=[name])[0]
self.worker_docker_network = create_or_get_network(docker_network_prefix, True)
self.docker_network_external = create_or_get_network(docker_network_prefix + "_ext", False)
self.docker_network_internal = create_or_get_network(docker_network_prefix + "_int", True)
def save_state(self):
# Remove complex container objects from state before serializing, these can be retrieved
simple_runs = {uuid: state._replace(container=None) for uuid, state in self._runs.items()}
self._state_committer.commit(simple_runs)
def load_state(self):
runs = self._state_committer.load()
# Retrieve the complex container objects from the Docker API
for uuid, run_state in runs.iteritems():
if run_state.container_id:
try:
run_state = run_state._replace(
container=self._docker.containers.get(run_state.container_id)
)
except docker.errors.NotFound as ex:
logger.debug('Error getting the container for the run: %s', ex)
run_state = run_state._replace(container_id=None)
finally:
self._runs[uuid] = run_state
def start(self):
"""
Load your state from disk, and start your sub-managers
"""
self.load_state()
self._image_manager.start()
self._dependency_manager.start()
def stop(self):
"""
Starts any necessary cleanup and propagates to its other managers
Blocks until cleanup is complete and it is safe to quit
"""
logger.info("Stopping Local Run Manager")
self._stop = True
self._image_manager.stop()
self._dependency_manager.stop()
self._run_state_manager.stop()
self.save_state()
try:
self.docker_network_internal.remove()
self.docker_network_external.remove()
except docker.errors.APIError as e:
logger.error("Cannot clear docker networks: {}".format(e.message))
logger.info("Stopped Local Run Manager. Exiting")
def kill_all(self):
"""
Kills all runs
"""
logger.debug("Killing all bundles")
# Set all bundle statuses to killed
with self._lock:
for uuid in self._runs.keys():
run_state = self._runs[uuid]
run_state.info['kill_message'] = 'Worker stopped'
run_state = run_state._replace(info=run_state.info, is_killed=True)
self._runs[uuid] = run_state
# Wait until all runs finished or KILL_TIMEOUT seconds pas
for attempt in range(LocalRunManager.KILL_TIMEOUT):
with self._lock:
self._runs = {
k: v for k, v in self._runs.items() if v.stage != LocalRunStage.FINISHED
}
if len(self._runs) > 0:
logger.debug(
"Waiting for {} more bundles. {} seconds until force quit.".format(
len(self._runs), LocalRunManager.KILL_TIMEOUT - attempt
)
)
time.sleep(1)
def process_runs(self):
""" Transition each run then filter out finished runs """
with self._lock:
# transition all runs
for bundle_uuid in self._runs.keys():
run_state = self._runs[bundle_uuid]
self._runs[bundle_uuid] = self._run_state_manager.transition(run_state)
# filter out finished runs
finished_container_ids = [
run.container
for run in self._runs.values()
if (run.stage == LocalRunStage.FINISHED or run.stage == LocalRunStage.FINALIZING)
and run.container_id is not None
]
for container_id in finished_container_ids:
try:
container = self._docker.containers.get(container_id)
container.remove(force=True)
except (docker.errors.NotFound, docker.errors.NullResource):
pass
self._runs = {k: v for k, v in self._runs.items() if v.stage != LocalRunStage.FINISHED}
def create_run(self, bundle, resources):
"""
Creates and starts processing a new run with the given bundle and
resources
"""
if self._stop:
# Run Manager stopped, refuse more runs
return
bundle_uuid = bundle['uuid']
bundle_path = os.path.join(self._bundles_dir, bundle_uuid)
now = time.time()
run_state = LocalRunState(
stage=LocalRunStage.PREPARING,
run_status='',
bundle=bundle,
bundle_path=os.path.realpath(bundle_path),
resources=resources,
start_time=now,
container_id=None,
container=None,
docker_image=None,
is_killed=False,
has_contents=False,
cpuset=None,
gpuset=None,
time_used=0,
max_memory=0,
disk_utilization=0,
info={},
)
with self._lock:
self._runs[bundle_uuid] = run_state
def assign_cpu_and_gpu_sets(self, request_cpus, request_gpus):
"""
Propose a cpuset and gpuset to a bundle based on given requested resources.
Note: no side effects (this is important: we don't want to maintain more state than necessary)
Arguments:
request_cpus: integer
request_gpus: integer
Returns a 2-tuple:
cpuset: assigned cpuset (str indices).
gpuset: assigned gpuset (str indices).
Throws an exception if unsuccessful.
"""
cpuset, gpuset = set(self._cpuset), set(self._gpuset)
with self._lock:
for run_state in self._runs.values():
if run_state.stage == LocalRunStage.RUNNING:
cpuset -= run_state.cpuset
gpuset -= run_state.gpuset
if len(cpuset) < request_cpus or len(gpuset) < request_gpus:
raise Exception("Not enough cpus or gpus to assign!")
def propose_set(resource_set, request_count):
return set(str(el) for el in list(resource_set)[:request_count])
return propose_set(cpuset, request_cpus), propose_set(gpuset, request_gpus)
def get_run(self, uuid):
"""
Returns the state of the run with the given UUID if it is managed
by this RunManager, returns None otherwise
"""
with self._lock:
return self._runs.get(uuid, None)
def mark_finalized(self, uuid):
"""
Marks the run as finalized server-side so it can be discarded
"""
if uuid in self._runs:
with self._lock:
self._runs[uuid].info['finalized'] = True
def read(self, run_state, path, dep_paths, args, reply):
"""
Use your Reader helper to invoke the given read command
"""
self._reader.read(run_state, path, dep_paths, args, reply)
def write(self, run_state, path, dep_paths, string):
"""
Write string to path in bundle with uuid
"""
if os.path.normpath(path) in dep_paths:
return
with open(os.path.join(run_state.bundle_path, path), 'w') as f:
f.write(string)
def netcat(self, run_state, port, message, reply):
"""
Write message to port of bundle with uuid and read the response.
Returns a stream with the response contents
"""
container_ip = docker_utils.get_container_ip(
self.worker_docker_network.name, run_state.container
)
s = socket.socket(socket.AF_INET, socket.SOCK_STREAM)
s.connect((container_ip, port))
s.sendall(message)
total_data = []
while True:
data = s.recv(LocalRunManager.NETCAT_BUFFER_SIZE)
if not data:
break
total_data.append(data)
s.close()
reply(None, {}, ''.join(total_data))
def kill(self, run_state):
"""
Kill bundle with uuid
"""
with self._lock:
run_state.info['kill_message'] = 'Kill requested'
run_state = run_state._replace(info=run_state.info, is_killed=True)
self._runs[run_state.bundle['uuid']] = run_state
@property
def all_runs(self):
"""
Returns a list of all the runs managed by this RunManager
"""
with self._lock:
result = {
bundle_uuid: {
'run_status': run_state.run_status,
'start_time': run_state.start_time,
'docker_image': run_state.docker_image,
'info': run_state.info,
'state': LocalRunStage.WORKER_STATE_TO_SERVER_STATE[run_state.stage],
}
for bundle_uuid, run_state in self._runs.items()
}
return result
@property
def all_dependencies(self):
"""
Returns a list of all dependencies available in this RunManager
"""
return self._dependency_manager.all_dependencies
@property
def cpus(self):
"""
Total number of CPUs this RunManager has
"""
return len(self._cpuset)
@property
def gpus(self):
"""
Total number of GPUs this RunManager has
"""
return len(self._gpuset)
@property
def memory_bytes(self):
"""
Total installed memory of this RunManager
"""
try:
return os.sysconf('SC_PAGE_SIZE') * os.sysconf('SC_PHYS_PAGES')
except ValueError:
# Fallback to sysctl when os.sysconf('SC_PHYS_PAGES') fails on OS X
return int(check_output(['sysctl', '-n', 'hw.memsize']).strip())