def create_CNN_params(rng):
conv_W_2_pre, conv_b_2_pre = create_conv_para(
rng, filter_shape=gate_filter_shape)
conv_W_2_gate, conv_b_2_gate = create_conv_para(
rng, filter_shape=gate_filter_shape)
conv_W_2, conv_b_2 = create_conv_para(rng,
filter_shape=(hidden_size[1], 1,
hidden_size[0],
filter_size[0]))
conv_W_2_context, conv_b_2_context = create_conv_para(
rng, filter_shape=(hidden_size[1], 1, hidden_size[0], 1))
return conv_W_2_pre, conv_b_2_pre, conv_W_2_gate, conv_b_2_gate, conv_W_2, conv_b_2, conv_W_2_context, conv_b_2_context
def evaluate_lenet5(learning_rate=0.02,
n_epochs=100,
emb_size=300,
batch_size=50,
filter_size=[3],
sent_len=40,
claim_len=40,
cand_size=10,
hidden_size=[300, 300],
max_pred_pick=5):
model_options = locals().copy()
print "model options", model_options
pred_id2label = {1: 'SUPPORTS', 0: 'REFUTES', 2: 'NOT ENOUGH INFO'}
seed = 1234
np.random.seed(seed)
rng = np.random.RandomState(
seed) #random seed, control the model generates the same results
srng = T.shared_randomstreams.RandomStreams(rng.randint(seed))
"load raw data"
train_sents, train_sent_masks, train_sent_labels, train_claims, train_claim_mask, train_labels, word2id = load_fever_train(
sent_len, claim_len, cand_size)
train_3th_sents, train_3th_sent_masks, train_3th_sent_labels, train_3th_claims, train_3th_claim_mask, train_3th_labels, word2id = load_fever_train_NoEnoughInfo(
sent_len, claim_len, cand_size, word2id)
test_sents, test_sent_masks, test_sent_labels, test_claims, test_claim_mask, test_sent_names, test_ground_names, test_labels, word2id = load_fever_dev(
sent_len, claim_len, cand_size, word2id)
test_3th_sents, test_3th_sent_masks, test_3th_sent_labels, test_3th_claims, test_3th_claim_mask, test_3th_labels, word2id = load_fever_dev_NoEnoughInfo(
sent_len, claim_len, cand_size, word2id)
train_sents = np.asarray(train_sents, dtype='int32')
train_3th_sents = np.asarray(train_3th_sents, dtype='int32')
joint_train_sents = np.concatenate((train_sents, train_3th_sents))
test_sents = np.asarray(test_sents, dtype='int32')
test_3th_sents = np.asarray(test_3th_sents, dtype='int32')
joint_test_sents = np.concatenate((test_sents, test_3th_sents))
train_sent_masks = np.asarray(train_sent_masks, dtype=theano.config.floatX)
train_3th_sent_masks = np.asarray(train_3th_sent_masks,
dtype=theano.config.floatX)
joint_train_sent_masks = np.concatenate(
(train_sent_masks, train_3th_sent_masks))
test_sent_masks = np.asarray(test_sent_masks, dtype=theano.config.floatX)
test_3th_sent_masks = np.asarray(test_3th_sent_masks,
dtype=theano.config.floatX)
joint_test_sent_masks = np.concatenate(
(test_sent_masks, test_3th_sent_masks))
train_sent_labels = np.asarray(train_sent_labels, dtype='int32')
train_3th_sent_labels = np.asarray(train_3th_sent_labels, dtype='int32')
joint_train_sent_labels = np.concatenate(
(train_sent_labels, train_3th_sent_labels))
test_sent_labels = np.asarray(test_sent_labels, dtype='int32')
test_3th_sent_labels = np.asarray(test_3th_sent_labels, dtype='int32')
joint_test_sent_labels = np.concatenate(
(test_sent_labels, test_3th_sent_labels))
train_claims = np.asarray(train_claims, dtype='int32')
train_3th_claims = np.asarray(train_3th_claims, dtype='int32')
joint_train_claims = np.concatenate((train_claims, train_3th_claims))
test_claims = np.asarray(test_claims, dtype='int32')
test_3th_claims = np.asarray(test_3th_claims, dtype='int32')
joint_test_claims = np.concatenate((test_claims, test_3th_claims))
train_claim_mask = np.asarray(train_claim_mask, dtype=theano.config.floatX)
train_3th_claim_mask = np.asarray(train_3th_claim_mask,
dtype=theano.config.floatX)
joint_train_claim_mask = np.concatenate(
(train_claim_mask, train_3th_claim_mask))
test_claim_mask = np.asarray(test_claim_mask, dtype=theano.config.floatX)
test_3th_claim_mask = np.asarray(test_3th_claim_mask,
dtype=theano.config.floatX)
joint_test_claim_mask = np.concatenate(
(test_claim_mask, test_3th_claim_mask))
train_labels = np.asarray(train_labels, dtype='int32')
train_3th_labels = np.asarray(train_3th_labels, dtype='int32')
joint_train_labels = np.concatenate((train_labels, train_3th_labels))
test_labels = np.asarray(test_labels, dtype='int32')
test_3th_labels = np.asarray(test_3th_labels, dtype='int32')
joint_test_labels = np.concatenate((test_labels, test_3th_labels))
joint_train_size = len(joint_train_claims)
joint_test_size = len(joint_test_claims)
train_size = len(train_claims)
test_size = len(test_claims)
test_3th_size = len(test_3th_claims)
vocab_size = len(word2id) + 1
print 'joint_train size: ', joint_train_size, ' joint_test size: ', joint_test_size
print 'train size: ', train_size, ' test size: ', test_size
print 'vocab size: ', vocab_size
rand_values = rng.normal(
0.0, 0.01,
(vocab_size, emb_size)) #generate a matrix by Gaussian distribution
id2word = {y: x for x, y in word2id.iteritems()}
word2vec = load_word2vec()
rand_values = load_word2vec_to_init(rand_values, id2word, word2vec)
init_embeddings = theano.shared(
value=np.array(rand_values, dtype=theano.config.floatX), borrow=True
) #wrap up the python variable "rand_values" into theano variable
"now, start to build the input form of the model"
sents_ids = T.itensor3() #(batch, cand_size, sent_len)
sents_mask = T.ftensor3()
sents_labels = T.imatrix() #(batch, cand_size)
claim_ids = T.imatrix() #(batch, claim_len)
claim_mask = T.fmatrix()
joint_sents_ids = T.itensor3() #(batch, cand_size, sent_len)
joint_sents_mask = T.ftensor3()
joint_sents_labels = T.imatrix() #(batch, cand_size)
joint_claim_ids = T.imatrix() #(batch, claim_len)
joint_claim_mask = T.fmatrix()
joint_labels = T.ivector()
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
embed_input_sents = init_embeddings[sents_ids.flatten(
)].reshape((batch_size * cand_size, sent_len, emb_size)).dimshuffle(
0, 2, 1
) #embed_input(init_embeddings, sents_ids_l)#embeddings[sents_ids_l.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1) #the input format can be adapted into CNN or GRU or LSTM
embed_input_claim = init_embeddings[claim_ids.flatten()].reshape(
(batch_size, claim_len, emb_size)).dimshuffle(0, 2, 1)
conv_W, conv_b = create_conv_para(rng,
filter_shape=(hidden_size[0], 1,
emb_size, filter_size[0]))
att_conv_W, att_conv_b = create_conv_para(rng,
filter_shape=(hidden_size[0], 1,
emb_size,
filter_size[0]))
conv_W_context, conv_b_context = create_conv_para(
rng, filter_shape=(hidden_size[0], 1, emb_size, 1))
NN_para = [conv_W, conv_b, att_conv_W, att_conv_b, conv_W_context]
conv_model_sents = Conv_with_Mask(
rng,
input_tensor3=embed_input_sents,
mask_matrix=sents_mask.reshape(
(sents_mask.shape[0] * sents_mask.shape[1], sents_mask.shape[2])),
image_shape=(batch_size * cand_size, 1, emb_size, sent_len),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
W=conv_W,
b=conv_b
) #mutiple mask with the conv_out to set the features by UNK to zero
sent_embeddings = conv_model_sents.maxpool_vec #(batch_size*cand_size, hidden_size) # each sentence then have an embedding of length hidden_size
batch_sent_emb = sent_embeddings.reshape(
(batch_size, cand_size, hidden_size[0]))
conv_model_claims = Conv_with_Mask(
rng,
input_tensor3=embed_input_claim,
mask_matrix=claim_mask,
image_shape=(batch_size, 1, emb_size, claim_len),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
W=conv_W,
b=conv_b
) #mutiple mask with the conv_out to set the features by UNK to zero
claim_embeddings = conv_model_claims.maxpool_vec #(batch_size, hidden_size) # each sentence then have an embedding of length hidden_size
batch_claim_emb = T.repeat(claim_embeddings.dimshuffle(0, 'x', 1),
cand_size,
axis=1)
# concate_claim_sent = T.concatenate([batch_claim_emb,batch_sent_emb ], axis=2)
# concate_2_matrix = concate_claim_sent.reshape((batch_size*cand_size, hidden_size[0]*2))
concate_claim_sent = T.concatenate([
batch_claim_emb, batch_sent_emb,
T.sum(batch_claim_emb * batch_sent_emb, axis=2).dimshuffle(0, 1, 'x')
],
axis=2)
concate_2_matrix = concate_claim_sent.reshape(
(batch_size * cand_size, hidden_size[0] * 2 + 1))
LR_input = concate_2_matrix
LR_input_size = hidden_size[0] * 2 + 1
#classification layer, it is just mapping from a feature vector of size "hidden_size" to a vector of only two values: positive, negative
U_a = create_ensemble_para(
rng, 1, LR_input_size) # the weight matrix hidden_size*2
# LR_b = theano.shared(value=np.zeros((8,),dtype=theano.config.floatX),name='LR_b', borrow=True) #bias for each target class
LR_para = [U_a]
# layer_LR=LogisticRegression(rng, input=LR_input, n_in=LR_input_size, n_out=8, W=U_a, b=LR_b) #basically it is a multiplication between weight matrix and input feature vector
score_matrix = T.nnet.sigmoid(LR_input.dot(U_a)) #batch * 12
inter_matrix = score_matrix.reshape((batch_size, cand_size))
# inter_sent_claim = T.batched_dot(batch_sent_emb, batch_claim_emb) #(batch_size, cand_size, 1)
# inter_matrix = T.nnet.sigmoid(inter_sent_claim.reshape((batch_size, cand_size)))
'''
maybe 1.0-inter_matrix can be rewritten into 1/e^(inter_matrix)
'''
# prob_pos = T.where( sents_labels < 1, 1.0-inter_matrix, inter_matrix)
# loss = -T.mean(T.log(prob_pos))
#f1 as loss
batch_overlap = T.sum(sents_labels * inter_matrix, axis=1)
batch_recall = batch_overlap / T.sum(sents_labels, axis=1)
batch_precision = batch_overlap / T.sum(inter_matrix, axis=1)
batch_f1 = 2.0 * batch_recall * batch_precision / (batch_recall +
batch_precision)
loss = -T.mean(T.log(batch_f1))
# loss = T.nnet.nnet.binary_crossentropy(inter_matrix, sents_labels).mean()
'''
training task2, predict 3 labels
'''
joint_embed_input_sents = init_embeddings[joint_sents_ids.flatten(
)].reshape((batch_size * cand_size, sent_len, emb_size)).dimshuffle(
0, 2, 1
) #embed_input(init_embeddings, sents_ids_l)#embeddings[sents_ids_l.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1) #the input format can be adapted into CNN or GRU or LSTM
joint_embed_input_claim = init_embeddings[
joint_claim_ids.flatten()].reshape(
(batch_size, claim_len, emb_size)).dimshuffle(0, 2, 1)
joint_conv_model_sents = Conv_with_Mask(
rng,
input_tensor3=joint_embed_input_sents,
mask_matrix=joint_sents_mask.reshape(
(joint_sents_mask.shape[0] * joint_sents_mask.shape[1],
joint_sents_mask.shape[2])),
image_shape=(batch_size * cand_size, 1, emb_size, sent_len),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
W=conv_W,
b=conv_b
) #mutiple mask with the conv_out to set the features by UNK to zero
joint_sent_embeddings = joint_conv_model_sents.maxpool_vec #(batch_size*cand_size, hidden_size) # each sentence then have an embedding of length hidden_size
joint_batch_sent_emb = joint_sent_embeddings.reshape(
(batch_size, cand_size, hidden_size[0]))
joint_premise_emb = T.sum(joint_batch_sent_emb *
joint_sents_labels.dimshuffle(0, 1, 'x'),
axis=1) #(batch, hidden_size)
joint_conv_model_claims = Conv_with_Mask(
rng,
input_tensor3=joint_embed_input_claim,
mask_matrix=joint_claim_mask,
image_shape=(batch_size, 1, emb_size, claim_len),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
W=conv_W,
b=conv_b
) #mutiple mask with the conv_out to set the features by UNK to zero
joint_claim_embeddings = joint_conv_model_claims.maxpool_vec #(batch_size, hidden_size) # each sentence then have an embedding of length hidden_size
joint_premise_hypo_emb = T.concatenate(
[joint_premise_emb, joint_claim_embeddings],
axis=1) #(batch, 2*hidden_size)
'''
attentive conv in task2
'''
joint_sents_tensor3 = joint_embed_input_sents.dimshuffle(0, 2, 1).reshape(
(batch_size, cand_size * sent_len, emb_size))
joint_sents_dot = T.batched_dot(
joint_sents_tensor3, joint_sents_tensor3.dimshuffle(
0, 2, 1)) #(batch_size, cand_size*sent_len, cand_size*sent_len)
joint_sents_dot_2_matrix = T.nnet.softmax(
joint_sents_dot.reshape(
(batch_size * cand_size * sent_len, cand_size * sent_len)))
joint_sents_context = T.batched_dot(
joint_sents_dot_2_matrix.reshape(
(batch_size, cand_size * sent_len, cand_size * sent_len)),
joint_sents_tensor3) #(batch_size, cand_size*sent_len, emb_size)
joint_add_sents_context = joint_embed_input_sents + joint_sents_context.reshape(
(batch_size * cand_size, sent_len, emb_size)
).dimshuffle(
0, 2, 1
) #T.concatenate([joint_embed_input_sents, joint_sents_context.reshape((batch_size*cand_size, sent_len, emb_size)).dimshuffle(0,2,1)], axis=1) #(batch_size*cand_size, 2*emb_size, sent_len)
attentive_conv_layer = Attentive_Conv_for_Pair_easy_version(
rng,
input_tensor3=
joint_add_sents_context, #batch_size*cand_size, 2*emb_size, sent_len
input_tensor3_r=T.repeat(joint_embed_input_claim, cand_size, axis=0),
mask_matrix=joint_sents_mask.reshape(
(joint_sents_mask.shape[0] * joint_sents_mask.shape[1],
joint_sents_mask.shape[2])),
mask_matrix_r=T.repeat(joint_claim_mask, cand_size, axis=0),
image_shape=(batch_size * cand_size, 1, emb_size, sent_len),
image_shape_r=(batch_size * cand_size, 1, emb_size, claim_len),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[0], 1, emb_size, 1),
W=att_conv_W,
b=att_conv_b,
W_context=conv_W_context,
b_context=conv_b_context)
attentive_sent_embeddings_l = attentive_conv_layer.attentive_maxpool_vec_l.reshape(
(batch_size, cand_size,
hidden_size[0])) #(batch_size*cand_size, hidden_size)
attentive_sent_embeddings_r = attentive_conv_layer.attentive_maxpool_vec_r.reshape(
(batch_size, cand_size, hidden_size[0]))
masked_sents_attconv = attentive_sent_embeddings_l * joint_sents_labels.dimshuffle(
0, 1, 'x')
masked_claim_attconv = attentive_sent_embeddings_r * joint_sents_labels.dimshuffle(
0, 1, 'x')
fine_max = T.concatenate([
T.max(masked_sents_attconv, axis=1),
T.max(masked_claim_attconv, axis=1)
],
axis=1) #(batch, 2*hidden)
# fine_sum = T.concatenate([T.sum(masked_sents_attconv, axis=1),T.sum(masked_claim_attconv, axis=1)],axis=1) #(batch, 2*hidden)
"Logistic Regression layer"
joint_LR_input = T.concatenate([joint_premise_hypo_emb, fine_max], axis=1)
joint_LR_input_size = 2 * hidden_size[0] + 2 * hidden_size[0]
joint_U_a = create_ensemble_para(rng, 3,
joint_LR_input_size) # (input_size, 3)
joint_LR_b = theano.shared(value=np.zeros((3, ),
dtype=theano.config.floatX),
name='LR_b',
borrow=True) #bias for each target class
joint_LR_para = [joint_U_a, joint_LR_b]
joint_layer_LR = LogisticRegression(
rng,
input=joint_LR_input,
n_in=joint_LR_input_size,
n_out=3,
W=joint_U_a,
b=joint_LR_b
) #basically it is a multiplication between weight matrix and input feature vector
joint_loss = joint_layer_LR.negative_log_likelihood(
joint_labels
) #for classification task, we usually used negative log likelihood as loss, the lower the better.
'''
testing
'''
# binarize_prob = T.where( inter_matrix > 0.5, 1, 0) #(batch_size, cand_size
masked_inter_matrix = inter_matrix * sents_labels #(batch, cand_size)
test_premise_emb = T.sum(batch_sent_emb *
masked_inter_matrix.dimshuffle(0, 1, 'x'),
axis=1)
test_premise_hypo_emb = T.concatenate([test_premise_emb, claim_embeddings],
axis=1)
#fine-maxsum
sents_tensor3 = embed_input_sents.dimshuffle(0, 2, 1).reshape(
(batch_size, cand_size * sent_len, emb_size))
sents_dot = T.batched_dot(sents_tensor3, sents_tensor3.dimshuffle(
0, 2, 1)) #(batch_size, cand_size*sent_len, cand_size*sent_len)
sents_dot_2_matrix = T.nnet.softmax(
sents_dot.reshape(
(batch_size * cand_size * sent_len, cand_size * sent_len)))
sents_context = T.batched_dot(
sents_dot_2_matrix.reshape(
(batch_size, cand_size * sent_len, cand_size * sent_len)),
sents_tensor3) #(batch_size, cand_size*sent_len, emb_size)
add_sents_context = embed_input_sents + sents_context.reshape(
(batch_size * cand_size, sent_len, emb_size)
).dimshuffle(
0, 2, 1
) #T.concatenate([embed_input_sents, sents_context.reshape((batch_size*cand_size, sent_len, emb_size)).dimshuffle(0,2,1)], axis=1) #(batch_size*cand_size, 2*emb_size, sent_len)
test_attentive_conv_layer = Attentive_Conv_for_Pair_easy_version(
rng,
input_tensor3=
add_sents_context, #batch_size*cand_size, 2*emb_size, sent_len
input_tensor3_r=T.repeat(embed_input_claim, cand_size, axis=0),
mask_matrix=sents_mask.reshape(
(sents_mask.shape[0] * sents_mask.shape[1], sents_mask.shape[2])),
mask_matrix_r=T.repeat(claim_mask, cand_size, axis=0),
image_shape=(batch_size * cand_size, 1, emb_size, sent_len),
image_shape_r=(batch_size * cand_size, 1, emb_size, claim_len),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[0], 1, emb_size, 1),
W=att_conv_W,
b=att_conv_b,
W_context=conv_W_context,
b_context=conv_b_context)
# attentive_sent_embeddings_l = attentive_conv_layer.attentive_maxpool_vec_l #(batch_size*cand_size, hidden_size)
# attentive_sent_embeddings_r = attentive_conv_layer.attentive_maxpool_vec_r
test_attentive_sent_embeddings_l = test_attentive_conv_layer.attentive_maxpool_vec_l.reshape(
(batch_size, cand_size,
hidden_size[0])) #(batch_size*cand_size, hidden_size)
test_attentive_sent_embeddings_r = test_attentive_conv_layer.attentive_maxpool_vec_r.reshape(
(batch_size, cand_size, hidden_size[0]))
test_masked_sents_attconv = test_attentive_sent_embeddings_l * masked_inter_matrix.dimshuffle(
0, 1, 'x')
test_masked_claim_attconv = test_attentive_sent_embeddings_r * masked_inter_matrix.dimshuffle(
0, 1, 'x')
test_fine_max = T.concatenate([
T.max(test_masked_sents_attconv, axis=1),
T.max(test_masked_claim_attconv, axis=1)
],
axis=1) #(batch, 2*hidden)
# test_fine_sum = T.concatenate([T.sum(test_masked_sents_attconv, axis=1),T.sum(test_masked_claim_attconv, axis=1)],axis=1) #(batch, 2*hidden)
test_LR_input = T.concatenate([test_premise_hypo_emb, test_fine_max],
axis=1)
test_LR_input_size = joint_LR_input_size
test_layer_LR = LogisticRegression(
rng,
input=test_LR_input,
n_in=test_LR_input_size,
n_out=3,
W=joint_U_a,
b=joint_LR_b
) #basically it is a multiplication between weight matrix and input feature vector
params = [init_embeddings] + NN_para + LR_para + joint_LR_para
cost = loss + joint_loss
"Use AdaGrad to update parameters"
updates = Gradient_Cost_Para(cost, params, learning_rate)
train_model = theano.function([
sents_ids, sents_mask, sents_labels, claim_ids, claim_mask,
joint_sents_ids, joint_sents_mask, joint_sents_labels, joint_claim_ids,
joint_claim_mask, joint_labels
],
cost,
updates=updates,
allow_input_downcast=True,
on_unused_input='ignore')
# dev_model = theano.function([sents_ids_l, sents_mask_l, sents_ids_r, sents_mask_r, labels], layer_LR.errors(labels), allow_input_downcast=True, on_unused_input='ignore')
test_model = theano.function([
sents_ids, sents_mask, sents_labels, claim_ids, claim_mask,
joint_labels
], [
inter_matrix,
test_layer_LR.errors(joint_labels), test_layer_LR.y_pred
],
allow_input_downcast=True,
on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 50000000000 # look as this many examples regardless
start_time = time.time()
mid_time = start_time
past_time = mid_time
epoch = 0
done_looping = False
joint_n_train_batches = joint_train_size / batch_size
joint_train_batch_start = list(
np.arange(joint_n_train_batches) *
batch_size) + [joint_train_size - batch_size]
n_train_batches = train_size / batch_size
train_batch_start = list(
np.arange(n_train_batches) * batch_size) + [train_size - batch_size]
n_test_batches = test_size / batch_size
test_batch_start = list(
np.arange(n_test_batches) * batch_size) + [test_size - batch_size]
n_test_3th_batches = test_3th_size / batch_size
test_3th_batch_start = list(np.arange(n_test_3th_batches) *
batch_size) + [test_3th_size - batch_size]
max_acc = 0.0
max_test_f1 = 0.0
max_acc_full_evi = 0.0
cost_i = 0.0
joint_train_indices = range(joint_train_size)
train_indices = range(train_size)
while epoch < n_epochs:
epoch = epoch + 1
random.Random(100).shuffle(
joint_train_indices
) #shuffle training set for each new epoch, is supposed to promote performance, but not garrenteed
random.Random(100).shuffle(train_indices)
iter_accu = 0
for joint_batch_id in joint_train_batch_start: #for each batch
# iter means how many batches have been run, taking into loop
iter = (epoch - 1) * joint_n_train_batches + iter_accu + 1
iter_accu += 1
joint_train_id_batch = joint_train_indices[
joint_batch_id:joint_batch_id + batch_size]
for i in range(3):
batch_id = random.choice(train_batch_start)
train_id_batch = train_indices[batch_id:batch_id + batch_size]
cost_i += train_model(
train_sents[train_id_batch],
train_sent_masks[train_id_batch],
train_sent_labels[train_id_batch],
train_claims[train_id_batch],
train_claim_mask[train_id_batch],
#joint_sents_ids,joint_sents_mask,joint_sents_labels, joint_claim_ids, joint_claim_mask, joint_labels
joint_train_sents[joint_train_id_batch],
joint_train_sent_masks[joint_train_id_batch],
joint_train_sent_labels[joint_train_id_batch],
joint_train_claims[joint_train_id_batch],
joint_train_claim_mask[joint_train_id_batch],
joint_train_labels[joint_train_id_batch])
#after each 1000 batches, we test the performance of the model on all test data
# if (epoch==1 and iter%1000==0) or (epoch>=2 and iter%5==0):
if iter % 100 == 0:
print 'Epoch ', epoch, 'iter ' + str(
iter) + ' average cost: ' + str(cost_i / iter), 'uses ', (
time.time() - past_time) / 60.0, 'min'
past_time = time.time()
f1_sum = 0.0
error_sum = 0.0
full_evi = 0
predictions = []
for test_batch_id in test_batch_start: # for each test batch
batch_prob, error_i, pred_i = test_model(
test_sents[test_batch_id:test_batch_id + batch_size],
test_sent_masks[test_batch_id:test_batch_id +
batch_size],
test_sent_labels[test_batch_id:test_batch_id +
batch_size],
test_claims[test_batch_id:test_batch_id + batch_size],
test_claim_mask[test_batch_id:test_batch_id +
batch_size],
test_labels[test_batch_id:test_batch_id + batch_size])
error_sum += error_i
batch_sent_labels = test_sent_labels[
test_batch_id:test_batch_id + batch_size]
batch_sent_names = test_sent_names[
test_batch_id:test_batch_id + batch_size]
batch_ground_names = test_ground_names[
test_batch_id:test_batch_id + batch_size]
batch_ground_labels = test_labels[
test_batch_id:test_batch_id + batch_size]
for i in range(batch_size):
instance_i = {}
instance_i['label'] = pred_id2label.get(
batch_ground_labels[i])
instance_i['predicted_label'] = pred_id2label.get(
pred_i[i])
pred_sent_names = []
gold_sent_names = batch_ground_names[i]
zipped = [(batch_prob[i, k], batch_sent_labels[i][k],
batch_sent_names[i][k])
for k in range(cand_size)]
sorted_zip = sorted(zipped,
key=lambda x: x[0],
reverse=True)
for j in range(cand_size):
triple = sorted_zip[j]
if triple[1] == 1.0:
'''
we should consider a rank, instead of binary
if triple[0] >0.5: can control the recall, influence the strict_acc
'''
if triple[0] > 0.5:
# pred_sent_names.append(batch_sent_names[i][j])
pred_sent_names.append(triple[2])
# if len(pred_sent_names) == max_pred_pick:
# break
instance_i['predicted_evidence'] = pred_sent_names
# print 'pred_sent_names:',pred_sent_names
# print 'gold_sent_names:',gold_sent_names
new_gold_names = []
for gold_name in gold_sent_names:
new_gold_names.append([None, None] + gold_name)
instance_i['evidence'] = [new_gold_names]
predictions.append(instance_i)
strict_score, label_accuracy, precision, recall, f1 = fever_score(
predictions)
print 'strict_score, label_accuracy, precision, recall, f1: ', strict_score, label_accuracy, precision, recall, f1
# test_f1=f1_sum/(len(test_batch_start)*batch_size)
for test_batch_id in test_3th_batch_start: # for each test batch
_, error_i, pred_i = test_model(
test_3th_sents[test_batch_id:test_batch_id +
batch_size],
test_3th_sent_masks[test_batch_id:test_batch_id +
batch_size],
test_3th_sent_labels[test_batch_id:test_batch_id +
batch_size],
test_3th_claims[test_batch_id:test_batch_id +
batch_size],
test_3th_claim_mask[test_batch_id:test_batch_id +
batch_size],
test_3th_labels[test_batch_id:test_batch_id +
batch_size])
for i in range(batch_size):
instance_i = {}
instance_i['label'] = pred_id2label.get(2)
instance_i['predicted_label'] = pred_id2label.get(
pred_i[i])
instance_i['predicted_evidence'] = []
instance_i['evidence'] = []
predictions.append(instance_i)
strict_score, label_accuracy, precision, recall, f1 = fever_score(
predictions)
print 'strict_score, label_accuracy, precision, recall, f1: ', strict_score, label_accuracy, precision, recall, f1
print 'Epoch ', epoch, 'uses ', (time.time() - mid_time) / 60.0, 'min'
mid_time = time.time()
#print 'Batch_size: ', update_freq
end_time = time.time()
print >> sys.stderr, ('The code for file ' + os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
return max_acc_test
def evaluate_lenet5(learning_rate=0.001, n_epochs=2000, nkerns=[90,90], batch_size=1, window_width=2,
maxSentLength=64, maxDocLength=60, emb_size=50, hidden_size=200,
L2_weight=0.0065, update_freq=1, norm_threshold=5.0, max_s_length=57, max_d_length=59, margin=0.2):
maxSentLength=max_s_length+2*(window_width-1)
maxDocLength=max_d_length+2*(window_width-1)
model_options = locals().copy()
print "model options", model_options
rootPath='/mounts/data/proj/wenpeng/Dataset/MCTest/';
rng = numpy.random.RandomState(23455)
train_data,train_size, test_data, test_size, vocab_size=load_MCTest_corpus_DPNQ(rootPath+'vocab_DPNQ.txt', rootPath+'mc500.train.tsv_standardlized.txt_with_state.txt_DSSSS.txt_DPN.txt_DPNQ.txt', rootPath+'mc500.test.tsv_standardlized.txt_with_state.txt_DSSSS.txt_DPN.txt_DPNQ.txt', max_s_length,maxSentLength, maxDocLength)#vocab_size contain train, dev and test
#datasets_nonoverlap, vocab_size_nonoverlap=load_SICK_corpus(rootPath+'vocab_nonoverlap_train_plus_dev.txt', rootPath+'train_plus_dev_removed_overlap_as_training.txt', rootPath+'test_removed_overlap_as_training.txt', max_truncate_nonoverlap,maxSentLength_nonoverlap, entailment=True)
#datasets, vocab_size=load_wikiQA_corpus(rootPath+'vocab_lower_in_word2vec.txt', rootPath+'WikiQA-train.txt', rootPath+'test_filtered.txt', maxSentLength)#vocab_size contain train, dev and test
#mtPath='/mounts/data/proj/wenpeng/Dataset/WikiQACorpus/MT/BLEU_NIST/'
# mt_train, mt_test=load_mts_wikiQA(rootPath+'Train_plus_dev_MT/concate_14mt_train.txt', rootPath+'Test_MT/concate_14mt_test.txt')
# extra_train, extra_test=load_extra_features(rootPath+'train_plus_dev_rule_features_cosine_eucli_negation_len1_len2_syn_hyper1_hyper2_anto(newsimi0.4).txt', rootPath+'test_rule_features_cosine_eucli_negation_len1_len2_syn_hyper1_hyper2_anto(newsimi0.4).txt')
# discri_train, discri_test=load_extra_features(rootPath+'train_plus_dev_discri_features_0.3.txt', rootPath+'test_discri_features_0.3.txt')
#wm_train, wm_test=load_wmf_wikiQA(rootPath+'train_word_matching_scores.txt', rootPath+'test_word_matching_scores.txt')
#wm_train, wm_test=load_wmf_wikiQA(rootPath+'train_word_matching_scores_normalized.txt', rootPath+'test_word_matching_scores_normalized.txt')
# results=[numpy.array(data_D), numpy.array(data_Q), numpy.array(data_A1), numpy.array(data_A2), numpy.array(data_A3), numpy.array(data_A4), numpy.array(Label),
# numpy.array(Length_D),numpy.array(Length_D_s), numpy.array(Length_Q), numpy.array(Length_A1), numpy.array(Length_A2), numpy.array(Length_A3), numpy.array(Length_A4),
# numpy.array(leftPad_D),numpy.array(leftPad_D_s), numpy.array(leftPad_Q), numpy.array(leftPad_A1), numpy.array(leftPad_A2), numpy.array(leftPad_A3), numpy.array(leftPad_A4),
# numpy.array(rightPad_D),numpy.array(rightPad_D_s), numpy.array(rightPad_Q), numpy.array(rightPad_A1), numpy.array(rightPad_A2), numpy.array(rightPad_A3), numpy.array(rightPad_A4)]
# return results, line_control
[train_data_D, train_data_A1, train_data_A2, train_data_A3, train_Label,
train_Length_D,train_Length_D_s, train_Length_A1, train_Length_A2, train_Length_A3,
train_leftPad_D,train_leftPad_D_s, train_leftPad_A1, train_leftPad_A2, train_leftPad_A3,
train_rightPad_D,train_rightPad_D_s, train_rightPad_A1, train_rightPad_A2, train_rightPad_A3]=train_data
[test_data_D, test_data_A1, test_data_A2, test_data_A3, test_Label,
test_Length_D,test_Length_D_s, test_Length_A1, test_Length_A2, test_Length_A3,
test_leftPad_D,test_leftPad_D_s, test_leftPad_A1, test_leftPad_A2, test_leftPad_A3,
test_rightPad_D,test_rightPad_D_s, test_rightPad_A1, test_rightPad_A2, test_rightPad_A3]=test_data
n_train_batches=train_size/batch_size
n_test_batches=test_size/batch_size
train_batch_start=list(numpy.arange(n_train_batches)*batch_size)
test_batch_start=list(numpy.arange(n_test_batches)*batch_size)
# indices_train_l=theano.shared(numpy.asarray(indices_train_l, dtype=theano.config.floatX), borrow=True)
# indices_train_r=theano.shared(numpy.asarray(indices_train_r, dtype=theano.config.floatX), borrow=True)
# indices_test_l=theano.shared(numpy.asarray(indices_test_l, dtype=theano.config.floatX), borrow=True)
# indices_test_r=theano.shared(numpy.asarray(indices_test_r, dtype=theano.config.floatX), borrow=True)
# indices_train_l=T.cast(indices_train_l, 'int64')
# indices_train_r=T.cast(indices_train_r, 'int64')
# indices_test_l=T.cast(indices_test_l, 'int64')
# indices_test_r=T.cast(indices_test_r, 'int64')
rand_values=random_value_normal((vocab_size+1, emb_size), theano.config.floatX, numpy.random.RandomState(1234))
rand_values[0]=numpy.array(numpy.zeros(emb_size),dtype=theano.config.floatX)
#rand_values[0]=numpy.array([1e-50]*emb_size)
rand_values=load_word2vec_to_init(rand_values, rootPath+'vocab_DPNQ_glove_50d.txt')
#rand_values=load_word2vec_to_init(rand_values, rootPath+'vocab_lower_in_word2vec_embs_300d.txt')
embeddings=theano.shared(value=rand_values, borrow=True)
#cost_tmp=0
error_sum=0
# allocate symbolic variables for the data
index = T.lscalar()
index_D = T.lmatrix() # now, x is the index matrix, must be integer
# index_Q = T.lvector()
index_A1= T.lvector()
index_A2= T.lvector()
index_A3= T.lvector()
# index_A4= T.lvector()
# y = T.lvector()
len_D=T.lscalar()
len_D_s=T.lvector()
# len_Q=T.lscalar()
len_A1=T.lscalar()
len_A2=T.lscalar()
len_A3=T.lscalar()
# len_A4=T.lscalar()
left_D=T.lscalar()
left_D_s=T.lvector()
# left_Q=T.lscalar()
left_A1=T.lscalar()
left_A2=T.lscalar()
left_A3=T.lscalar()
# left_A4=T.lscalar()
right_D=T.lscalar()
right_D_s=T.lvector()
# right_Q=T.lscalar()
right_A1=T.lscalar()
right_A2=T.lscalar()
right_A3=T.lscalar()
# right_A4=T.lscalar()
#x=embeddings[x_index.flatten()].reshape(((batch_size*4),maxSentLength, emb_size)).transpose(0, 2, 1).flatten()
ishape = (emb_size, maxSentLength) # sentence shape
dshape = (nkerns[0], maxDocLength) # doc shape
filter_words=(emb_size,window_width)
filter_sents=(nkerns[0], window_width)
#poolsize1=(1, ishape[1]-filter_size[1]+1) #?????????????????????????????
# length_after_wideConv=ishape[1]+filter_size[1]-1
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
# Reshape matrix of rasterized images of shape (batch_size,28*28)
# to a 4D tensor, compatible with our LeNetConvPoolLayer
#layer0_input = x.reshape(((batch_size*4), 1, ishape[0], ishape[1]))
layer0_D_input = embeddings[index_D.flatten()].reshape((maxDocLength,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
# layer0_Q_input = embeddings[index_Q.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_A1_input = embeddings[index_A1.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_A2_input = embeddings[index_A2.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_A3_input = embeddings[index_A3.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
# layer0_A4_input = embeddings[index_A4.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
conv_W, conv_b=create_conv_para(rng, filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]))
layer0_para=[conv_W, conv_b]
conv2_W, conv2_b=create_conv_para(rng, filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]))
layer2_para=[conv2_W, conv2_b]
high_W, high_b=create_highw_para(rng, nkerns[0], nkerns[1]) # this part decides nkern[0] and nkern[1] must be in the same dimension
highW_para=[high_W, high_b]
params = layer2_para+layer0_para+highW_para#+[embeddings]
#load_model(params)
layer0_D = Conv_with_input_para(rng, input=layer0_D_input,
image_shape=(maxDocLength, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]), W=conv_W, b=conv_b)
# layer0_Q = Conv_with_input_para(rng, input=layer0_Q_input,
# image_shape=(batch_size, 1, ishape[0], ishape[1]),
# filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]), W=conv_W, b=conv_b)
layer0_A1 = Conv_with_input_para(rng, input=layer0_A1_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]), W=conv_W, b=conv_b)
layer0_A2 = Conv_with_input_para(rng, input=layer0_A2_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]), W=conv_W, b=conv_b)
layer0_A3 = Conv_with_input_para(rng, input=layer0_A3_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]), W=conv_W, b=conv_b)
# layer0_A4 = Conv_with_input_para(rng, input=layer0_A4_input,
# image_shape=(batch_size, 1, ishape[0], ishape[1]),
# filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]), W=conv_W, b=conv_b)
layer0_D_output=debug_print(layer0_D.output, 'layer0_D.output')
# layer0_Q_output=debug_print(layer0_Q.output, 'layer0_Q.output')
layer0_A1_output=debug_print(layer0_A1.output, 'layer0_A1.output')
layer0_A2_output=debug_print(layer0_A2.output, 'layer0_A2.output')
layer0_A3_output=debug_print(layer0_A3.output, 'layer0_A3.output')
# layer0_A4_output=debug_print(layer0_A4.output, 'layer0_A4.output')
# layer1_DQ=Average_Pooling_Scan(rng, input_D=layer0_D_output, input_r=layer0_Q_output, kern=nkerns[0],
# left_D=left_D, right_D=right_D,
# left_D_s=left_D_s, right_D_s=right_D_s, left_r=left_Q, right_r=right_Q,
# length_D_s=len_D_s+filter_words[1]-1, length_r=len_Q+filter_words[1]-1,
# dim=maxSentLength+filter_words[1]-1, doc_len=maxDocLength, topk=3)
layer1_DA1=Average_Pooling_Scan(rng, input_D=layer0_D_output, input_r=layer0_A1_output, kern=nkerns[0],
left_D=left_D, right_D=right_D,
left_D_s=left_D_s, right_D_s=right_D_s, left_r=left_A1, right_r=right_A1,
length_D_s=len_D_s+filter_words[1]-1, length_r=len_A1+filter_words[1]-1,
dim=maxSentLength+filter_words[1]-1, doc_len=maxDocLength, topk=3)
layer1_DA2=Average_Pooling_Scan(rng, input_D=layer0_D_output, input_r=layer0_A2_output, kern=nkerns[0],
left_D=left_D, right_D=right_D,
left_D_s=left_D_s, right_D_s=right_D_s, left_r=left_A2, right_r=right_A2,
length_D_s=len_D_s+filter_words[1]-1, length_r=len_A2+filter_words[1]-1,
dim=maxSentLength+filter_words[1]-1, doc_len=maxDocLength, topk=3)
layer1_DA3=Average_Pooling_Scan(rng, input_D=layer0_D_output, input_r=layer0_A3_output, kern=nkerns[0],
left_D=left_D, right_D=right_D,
left_D_s=left_D_s, right_D_s=right_D_s, left_r=left_A3, right_r=right_A3,
length_D_s=len_D_s+filter_words[1]-1, length_r=len_A3+filter_words[1]-1,
dim=maxSentLength+filter_words[1]-1, doc_len=maxDocLength, topk=3)
# layer1_DA4=Average_Pooling_Scan(rng, input_D=layer0_D_output, input_r=layer0_A4_output, kern=nkerns[0],
# left_D=left_D, right_D=right_D,
# left_D_s=left_D_s, right_D_s=right_D_s, left_r=left_A4, right_r=right_A4,
# length_D_s=len_D_s+filter_words[1]-1, length_r=len_A4+filter_words[1]-1,
# dim=maxSentLength+filter_words[1]-1, doc_len=maxDocLength, topk=3)
#load_model_for_conv2([conv2_W, conv2_b])#this can not be used, as the nkerns[0]!=filter_size[0]
#conv from sentence to doc
# layer2_DQ = Conv_with_input_para(rng, input=layer1_DQ.output_D.reshape((batch_size, 1, nkerns[0], dshape[1])),
# image_shape=(batch_size, 1, nkerns[0], dshape[1]),
# filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
layer2_DA1 = Conv_with_input_para(rng, input=layer1_DA1.output_D.reshape((batch_size, 1, nkerns[0], dshape[1])),
image_shape=(batch_size, 1, nkerns[0], dshape[1]),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
layer2_DA2 = Conv_with_input_para(rng, input=layer1_DA2.output_D.reshape((batch_size, 1, nkerns[0], dshape[1])),
image_shape=(batch_size, 1, nkerns[0], dshape[1]),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
layer2_DA3 = Conv_with_input_para(rng, input=layer1_DA3.output_D.reshape((batch_size, 1, nkerns[0], dshape[1])),
image_shape=(batch_size, 1, nkerns[0], dshape[1]),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
# layer2_DA4 = Conv_with_input_para(rng, input=layer1_DA4.output_D.reshape((batch_size, 1, nkerns[0], dshape[1])),
# image_shape=(batch_size, 1, nkerns[0], dshape[1]),
# filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
#conv single Q and A into doc level with same conv weights
# layer2_Q = Conv_with_input_para_one_col_featuremap(rng, input=layer1_DQ.output_QA_sent_level_rep.reshape((batch_size, 1, nkerns[0], 1)),
# image_shape=(batch_size, 1, nkerns[0], 1),
# filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
layer2_A1 = Conv_with_input_para_one_col_featuremap(rng, input=layer1_DA1.output_QA_sent_level_rep.reshape((batch_size, 1, nkerns[0], 1)),
image_shape=(batch_size, 1, nkerns[0], 1),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
layer2_A2 = Conv_with_input_para_one_col_featuremap(rng, input=layer1_DA2.output_QA_sent_level_rep.reshape((batch_size, 1, nkerns[0], 1)),
image_shape=(batch_size, 1, nkerns[0], 1),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
layer2_A3 = Conv_with_input_para_one_col_featuremap(rng, input=layer1_DA3.output_QA_sent_level_rep.reshape((batch_size, 1, nkerns[0], 1)),
image_shape=(batch_size, 1, nkerns[0], 1),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
# layer2_A4 = Conv_with_input_para_one_col_featuremap(rng, input=layer1_DA4.output_QA_sent_level_rep.reshape((batch_size, 1, nkerns[0], 1)),
# image_shape=(batch_size, 1, nkerns[0], 1),
# filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
# layer2_Q_output_sent_rep_Dlevel=debug_print(layer2_Q.output_sent_rep_Dlevel, 'layer2_Q.output_sent_rep_Dlevel')
layer2_A1_output_sent_rep_Dlevel=debug_print(layer2_A1.output_sent_rep_Dlevel, 'layer2_A1.output_sent_rep_Dlevel')
layer2_A2_output_sent_rep_Dlevel=debug_print(layer2_A2.output_sent_rep_Dlevel, 'layer2_A2.output_sent_rep_Dlevel')
layer2_A3_output_sent_rep_Dlevel=debug_print(layer2_A3.output_sent_rep_Dlevel, 'layer2_A3.output_sent_rep_Dlevel')
# layer2_A4_output_sent_rep_Dlevel=debug_print(layer2_A4.output_sent_rep_Dlevel, 'layer2_A4.output_sent_rep_Dlevel')
# layer3_DQ=Average_Pooling_for_Top(rng, input_l=layer2_DQ.output, input_r=layer2_Q_output_sent_rep_Dlevel, kern=nkerns[1],
# left_l=left_D, right_l=right_D, left_r=0, right_r=0,
# length_l=len_D+filter_sents[1]-1, length_r=1,
# dim=maxDocLength+filter_sents[1]-1, topk=3)
layer3_DA1=Average_Pooling_for_Top(rng, input_l=layer2_DA1.output, input_r=layer2_A1_output_sent_rep_Dlevel, kern=nkerns[1],
left_l=left_D, right_l=right_D, left_r=0, right_r=0,
length_l=len_D+filter_sents[1]-1, length_r=1,
dim=maxDocLength+filter_sents[1]-1, topk=3)
layer3_DA2=Average_Pooling_for_Top(rng, input_l=layer2_DA2.output, input_r=layer2_A2_output_sent_rep_Dlevel, kern=nkerns[1],
left_l=left_D, right_l=right_D, left_r=0, right_r=0,
length_l=len_D+filter_sents[1]-1, length_r=1,
dim=maxDocLength+filter_sents[1]-1, topk=3)
layer3_DA3=Average_Pooling_for_Top(rng, input_l=layer2_DA3.output, input_r=layer2_A3_output_sent_rep_Dlevel, kern=nkerns[1],
left_l=left_D, right_l=right_D, left_r=0, right_r=0,
length_l=len_D+filter_sents[1]-1, length_r=1,
dim=maxDocLength+filter_sents[1]-1, topk=3)
# layer3_DA4=Average_Pooling_for_Top(rng, input_l=layer2_DA4.output, input_r=layer2_A4_output_sent_rep_Dlevel, kern=nkerns[1],
# left_l=left_D, right_l=right_D, left_r=0, right_r=0,
# length_l=len_D+filter_sents[1]-1, length_r=1,
# dim=maxDocLength+filter_sents[1]-1, topk=3)
#high-way
# transform_gate_DQ=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DQ.output_D_sent_level_rep) + high_b), 'transform_gate_DQ')
transform_gate_DA1=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DA1.output_D_sent_level_rep) + high_b), 'transform_gate_DA1')
transform_gate_DA2=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DA2.output_D_sent_level_rep) + high_b), 'transform_gate_DA2')
transform_gate_DA3=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DA3.output_D_sent_level_rep) + high_b), 'transform_gate_DA3')
# transform_gate_DA4=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DA4.output_D_sent_level_rep) + high_b), 'transform_gate_DA4')
# transform_gate_Q=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DQ.output_QA_sent_level_rep) + high_b), 'transform_gate_Q')
transform_gate_A1=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DA1.output_QA_sent_level_rep) + high_b), 'transform_gate_A1')
transform_gate_A2=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DA2.output_QA_sent_level_rep) + high_b), 'transform_gate_A2')
# transform_gate_A3=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DA3.output_QA_sent_level_rep) + high_b), 'transform_gate_A3')
# transform_gate_A4=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DA4.output_QA_sent_level_rep) + high_b), 'transform_gate_A4')
# overall_D_Q=debug_print((1.0-transform_gate_DQ)*layer1_DQ.output_D_sent_level_rep+transform_gate_DQ*layer3_DQ.output_D_doc_level_rep, 'overall_D_Q')
overall_D_A1=(1.0-transform_gate_DA1)*layer1_DA1.output_D_sent_level_rep+transform_gate_DA1*layer3_DA1.output_D_doc_level_rep
overall_D_A2=(1.0-transform_gate_DA2)*layer1_DA2.output_D_sent_level_rep+transform_gate_DA2*layer3_DA2.output_D_doc_level_rep
overall_D_A3=(1.0-transform_gate_DA3)*layer1_DA3.output_D_sent_level_rep+transform_gate_DA3*layer3_DA3.output_D_doc_level_rep
# overall_D_A4=(1.0-transform_gate_DA4)*layer1_DA4.output_D_sent_level_rep+transform_gate_DA4*layer3_DA4.output_D_doc_level_rep
# overall_Q=(1.0-transform_gate_Q)*layer1_DQ.output_QA_sent_level_rep+transform_gate_Q*layer2_Q.output_sent_rep_Dlevel
overall_A1=(1.0-transform_gate_A1)*layer1_DA1.output_QA_sent_level_rep+transform_gate_A1*layer2_A1.output_sent_rep_Dlevel
overall_A2=(1.0-transform_gate_A2)*layer1_DA2.output_QA_sent_level_rep+transform_gate_A2*layer2_A2.output_sent_rep_Dlevel
# overall_A3=(1.0-transform_gate_A3)*layer1_DA3.output_QA_sent_level_rep+transform_gate_A3*layer2_A3.output_sent_rep_Dlevel
# overall_A4=(1.0-transform_gate_A4)*layer1_DA4.output_QA_sent_level_rep+transform_gate_A4*layer2_A4.output_sent_rep_Dlevel
simi_sent_level1=debug_print(cosine(layer1_DA1.output_D_sent_level_rep, layer1_DA1.output_QA_sent_level_rep), 'simi_sent_level1')
simi_sent_level2=debug_print(cosine(layer1_DA2.output_D_sent_level_rep, layer1_DA2.output_QA_sent_level_rep), 'simi_sent_level2')
# simi_sent_level3=debug_print(cosine(layer1_DA3.output_D_sent_level_rep, layer1_DA3.output_QA_sent_level_rep), 'simi_sent_level3')
# simi_sent_level4=debug_print(cosine(layer1_DA4.output_D_sent_level_rep, layer1_DA4.output_QA_sent_level_rep), 'simi_sent_level4')
simi_doc_level1=debug_print(cosine(layer3_DA1.output_D_doc_level_rep, layer2_A1.output_sent_rep_Dlevel), 'simi_doc_level1')
simi_doc_level2=debug_print(cosine(layer3_DA2.output_D_doc_level_rep, layer2_A2.output_sent_rep_Dlevel), 'simi_doc_level2')
# simi_doc_level3=debug_print(cosine(layer3_DA3.output_D_doc_level_rep, layer2_A3.output_sent_rep_Dlevel), 'simi_doc_level3')
# simi_doc_level4=debug_print(cosine(layer3_DA4.output_D_doc_level_rep, layer2_A4.output_sent_rep_Dlevel), 'simi_doc_level4')
simi_overall_level1=debug_print(cosine(overall_D_A1, overall_A1), 'simi_overall_level1')
simi_overall_level2=debug_print(cosine(overall_D_A2, overall_A2), 'simi_overall_level2')
# simi_overall_level3=debug_print(cosine(overall_D_A3, overall_A3), 'simi_overall_level3')
# simi_overall_level4=debug_print(cosine(overall_D_A4, overall_A4), 'simi_overall_level4')
# simi_1=simi_overall_level1+simi_sent_level1+simi_doc_level1
# simi_2=simi_overall_level2+simi_sent_level2+simi_doc_level2
simi_1=(simi_overall_level1+simi_sent_level1+simi_doc_level1)/3.0
simi_2=(simi_overall_level2+simi_sent_level2+simi_doc_level2)/3.0
# simi_3=(simi_overall_level3+simi_sent_level3+simi_doc_level3)/3.0
# simi_4=(simi_overall_level4+simi_sent_level4+simi_doc_level4)/3.0
# eucli_1=1.0/(1.0+EUCLID(layer3_DQ.output_D+layer3_DA.output_D, layer3_DQ.output_QA+layer3_DA.output_QA))
# #only use overall_simi
# cost=T.maximum(0.0, margin+T.max([simi_overall_level2, simi_overall_level3, simi_overall_level4])-simi_overall_level1) # ranking loss: max(0, margin-nega+posi)
# posi_simi=simi_overall_level1
# nega_simi=T.max([simi_overall_level2, simi_overall_level3, simi_overall_level4])
#use ensembled simi
# cost=T.maximum(0.0, margin+T.max([simi_2, simi_3, simi_4])-simi_1) # ranking loss: max(0, margin-nega+posi)
# cost=T.maximum(0.0, margin+simi_2-simi_1)
simi_PQ=cosine(layer1_DA1.output_QA_sent_level_rep, layer1_DA3.output_D_sent_level_rep)
simi_NQ=cosine(layer1_DA2.output_QA_sent_level_rep, layer1_DA3.output_D_sent_level_rep)
#bad matching at overall level
# simi_PQ=cosine(overall_A1, overall_D_A3)
# simi_NQ=cosine(overall_A2, overall_D_A3)
match_cost=T.maximum(0.0, margin+simi_NQ-simi_PQ)
cost=T.maximum(0.0, margin+simi_sent_level2-simi_sent_level1)+T.maximum(0.0, margin+simi_doc_level2-simi_doc_level1)+T.maximum(0.0, margin+simi_overall_level2-simi_overall_level1)
cost=cost#+match_cost
# posi_simi=simi_1
# nega_simi=simi_2
L2_reg =debug_print((high_W**2).sum()+3*(conv2_W**2).sum()+(conv_W**2).sum(), 'L2_reg')#+(embeddings**2).sum(), 'L2_reg')#+(layer1.W** 2).sum()++(embeddings**2).sum()
cost=debug_print(cost+L2_weight*L2_reg, 'cost')
#cost=debug_print((cost_this+cost_tmp)/update_freq, 'cost')
test_model = theano.function([index], [cost, simi_sent_level1, simi_sent_level2, simi_doc_level1, simi_doc_level2, simi_overall_level1, simi_overall_level2],
givens={
index_D: test_data_D[index], #a matrix
# index_Q: test_data_Q[index],
index_A1: test_data_A1[index],
index_A2: test_data_A2[index],
index_A3: test_data_A3[index],
# index_A4: test_data_A4[index],
len_D: test_Length_D[index],
len_D_s: test_Length_D_s[index],
# len_Q: test_Length_Q[index],
len_A1: test_Length_A1[index],
len_A2: test_Length_A2[index],
len_A3: test_Length_A3[index],
# len_A4: test_Length_A4[index],
left_D: test_leftPad_D[index],
left_D_s: test_leftPad_D_s[index],
# left_Q: test_leftPad_Q[index],
left_A1: test_leftPad_A1[index],
left_A2: test_leftPad_A2[index],
left_A3: test_leftPad_A3[index],
# left_A4: test_leftPad_A4[index],
right_D: test_rightPad_D[index],
right_D_s: test_rightPad_D_s[index],
# right_Q: test_rightPad_Q[index],
right_A1: test_rightPad_A1[index],
right_A2: test_rightPad_A2[index],
right_A3: test_rightPad_A3[index]
# right_A4: test_rightPad_A4[index]
}, on_unused_input='ignore')
#params = layer3.params + layer2.params + layer1.params+ [conv_W, conv_b]
accumulator=[]
for para_i in params:
eps_p=numpy.zeros_like(para_i.get_value(borrow=True),dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
grad_i=debug_print(grad_i,'grad_i')
acc = acc_i + T.sqr(grad_i)
updates.append((param_i, param_i - learning_rate * grad_i / T.sqrt(acc))) #AdaGrad
updates.append((acc_i, acc))
# for param_i, grad_i, acc_i in zip(params, grads, accumulator):
# acc = acc_i + T.sqr(grad_i)
# if param_i == embeddings:
# updates.append((param_i, T.set_subtensor((param_i - learning_rate * grad_i / T.sqrt(acc))[0], theano.shared(numpy.zeros(emb_size))))) #AdaGrad
# else:
# updates.append((param_i, param_i - learning_rate * grad_i / T.sqrt(acc))) #AdaGrad
# updates.append((acc_i, acc))
train_model = theano.function([index], [cost, simi_sent_level1, simi_sent_level2, simi_doc_level1, simi_doc_level2, simi_overall_level1, simi_overall_level2], updates=updates,
givens={
index_D: train_data_D[index],
# index_Q: train_data_Q[index],
index_A1: train_data_A1[index],
index_A2: train_data_A2[index],
index_A3: train_data_A3[index],
# index_A4: train_data_A4[index],
len_D: train_Length_D[index],
len_D_s: train_Length_D_s[index],
# len_Q: train_Length_Q[index],
len_A1: train_Length_A1[index],
len_A2: train_Length_A2[index],
len_A3: train_Length_A3[index],
# len_A4: train_Length_A4[index],
left_D: train_leftPad_D[index],
left_D_s: train_leftPad_D_s[index],
# left_Q: train_leftPad_Q[index],
left_A1: train_leftPad_A1[index],
left_A2: train_leftPad_A2[index],
left_A3: train_leftPad_A3[index],
# left_A4: train_leftPad_A4[index],
right_D: train_rightPad_D[index],
right_D_s: train_rightPad_D_s[index],
# right_Q: train_rightPad_Q[index],
right_A1: train_rightPad_A1[index],
right_A2: train_rightPad_A2[index],
right_A3: train_rightPad_A3[index]
# right_A4: train_rightPad_A4[index]
}, on_unused_input='ignore')
train_model_predict = theano.function([index], [cost, simi_sent_level1, simi_sent_level2, simi_doc_level1, simi_doc_level2, simi_overall_level1, simi_overall_level2],
givens={
index_D: train_data_D[index],
# index_Q: train_data_Q[index],
index_A1: train_data_A1[index],
index_A2: train_data_A2[index],
index_A3: train_data_A3[index],
# index_A4: train_data_A4[index],
len_D: train_Length_D[index],
len_D_s: train_Length_D_s[index],
# len_Q: train_Length_Q[index],
len_A1: train_Length_A1[index],
len_A2: train_Length_A2[index],
len_A3: train_Length_A3[index],
# len_A4: train_Length_A4[index],
left_D: train_leftPad_D[index],
left_D_s: train_leftPad_D_s[index],
# left_Q: train_leftPad_Q[index],
left_A1: train_leftPad_A1[index],
left_A2: train_leftPad_A2[index],
left_A3: train_leftPad_A3[index],
# left_A4: train_leftPad_A4[index],
right_D: train_rightPad_D[index],
right_D_s: train_rightPad_D_s[index],
# right_Q: train_rightPad_Q[index],
right_A1: train_rightPad_A1[index],
right_A2: train_rightPad_A2[index],
right_A3: train_rightPad_A3[index]
# right_A4: train_rightPad_A4[index]
}, on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
patience_increase = 2 # wait this much longer when a new best is
# found
improvement_threshold = 0.995 # a relative improvement of this much is
# considered significant
validation_frequency = min(n_train_batches, patience / 2)
# go through this many
# minibatche before checking the network
# on the validation set; in this case we
# check every epoch
best_params = None
best_validation_loss = numpy.inf
best_iter = 0
test_score = 0.
start_time = time.clock()
mid_time = start_time
epoch = 0
done_looping = False
max_acc=0.0
best_epoch=0
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
#for minibatch_index in xrange(n_train_batches): # each batch
minibatch_index=0
shuffle(train_batch_start)#shuffle training data
posi_train_sent=[]
nega_train_sent=[]
posi_train_doc=[]
nega_train_doc=[]
posi_train_overall=[]
nega_train_overall=[]
for batch_start in train_batch_start:
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * n_train_batches + minibatch_index +1
sys.stdout.write( "Training :[%6f] %% complete!\r" % ((iter%train_size)*100.0/train_size) )
sys.stdout.flush()
minibatch_index=minibatch_index+1
cost_average, simi_sent_level1, simi_sent_level2, simi_doc_level1, simi_doc_level2, simi_overall_level1, simi_overall_level2= train_model(batch_start)
posi_train_sent.append(simi_sent_level1)
nega_train_sent.append(simi_sent_level2)
posi_train_doc.append(simi_doc_level1)
nega_train_doc.append(simi_doc_level2)
posi_train_overall.append(simi_overall_level1)
nega_train_overall.append(simi_overall_level2)
if iter % n_train_batches == 0:
corr_train_sent=compute_corr(posi_train_sent, nega_train_sent)
corr_train_doc=compute_corr(posi_train_doc, nega_train_doc)
corr_train_overall=compute_corr(posi_train_overall, nega_train_overall)
print 'training @ iter = '+str(iter)+' average cost: '+str(cost_average)+'corr rate:'+str(corr_train_sent*300.0/train_size)+' '+str(corr_train_doc*300.0/train_size)+' '+str(corr_train_overall*300.0/train_size)
if iter % validation_frequency == 0:
posi_test_sent=[]
nega_test_sent=[]
posi_test_doc=[]
nega_test_doc=[]
posi_test_overall=[]
nega_test_overall=[]
for i in test_batch_start:
cost, simi_sent_level1, simi_sent_level2, simi_doc_level1, simi_doc_level2, simi_overall_level1, simi_overall_level2=test_model(i)
posi_test_sent.append(simi_sent_level1)
nega_test_sent.append(simi_sent_level2)
posi_test_doc.append(simi_doc_level1)
nega_test_doc.append(simi_doc_level2)
posi_test_overall.append(simi_overall_level1)
nega_test_overall.append(simi_overall_level2)
corr_test_sent=compute_corr(posi_test_sent, nega_test_sent)
corr_test_doc=compute_corr(posi_test_doc, nega_test_doc)
corr_test_overall=compute_corr(posi_test_overall, nega_test_overall)
#write_file.close()
#test_score = numpy.mean(test_losses)
test_acc_sent=corr_test_sent*1.0/(test_size/3.0)
test_acc_doc=corr_test_doc*1.0/(test_size/3.0)
test_acc_overall=corr_test_overall*1.0/(test_size/3.0)
#test_acc=1-test_score
# print(('\t\t\tepoch %i, minibatch %i/%i, test acc of best '
# 'model %f %%') %
# (epoch, minibatch_index, n_train_batches,test_acc * 100.))
print '\t\t\tepoch', epoch, ', minibatch', minibatch_index, '/', n_train_batches, 'test acc of best model', test_acc_sent*100,test_acc_doc*100,test_acc_overall*100
#now, see the results of LR
#write_feature=open(rootPath+'feature_check.txt', 'w')
find_better=False
if test_acc_sent > max_acc:
max_acc=test_acc_sent
best_epoch=epoch
find_better=True
if test_acc_doc > max_acc:
max_acc=test_acc_doc
best_epoch=epoch
find_better=True
if test_acc_overall > max_acc:
max_acc=test_acc_overall
best_epoch=epoch
find_better=True
print '\t\t\tmax:', max_acc,'(at',best_epoch,')'
if find_better==True:
store_model_to_file(params, best_epoch, max_acc)
print 'Finished storing best params'
if patience <= iter:
done_looping = True
break
print 'Epoch ', epoch, 'uses ', (time.clock()-mid_time)/60.0, 'min'
mid_time = time.clock()
#writefile.close()
#print 'Batch_size: ', update_freq
end_time = time.clock()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' +
os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(learning_rate=0.085,
n_epochs=2000,
nkerns=[50, 50],
batch_size=1,
window_width=7,
maxSentLength=60,
emb_size=300,
hidden_size=200,
margin=0.5,
L2_weight=0.00005,
update_freq=10,
norm_threshold=5.0):
model_options = locals().copy()
print "model options", model_options
rootPath = '/mounts/data/proj/wenpeng/Dataset/MicrosoftParaphrase/tokenized_msr/'
rng = numpy.random.RandomState(23455)
datasets, vocab_size = load_msr_corpus(rootPath + 'vocab.txt',
rootPath + 'tokenized_train.txt',
rootPath + 'tokenized_test.txt',
maxSentLength)
mtPath = '/mounts/data/proj/wenpeng/Dataset/paraphraseMT/'
mt_train, mt_test = load_mts(mtPath + 'concate_15mt_train.txt',
mtPath + 'concate_15mt_test.txt')
indices_train, trainY, trainLengths, normalized_train_length, trainLeftPad, trainRightPad = datasets[
0]
indices_train_l = indices_train[::2, :]
indices_train_r = indices_train[1::2, :]
trainLengths_l = trainLengths[::2]
trainLengths_r = trainLengths[1::2]
normalized_train_length_l = normalized_train_length[::2]
normalized_train_length_r = normalized_train_length[1::2]
trainLeftPad_l = trainLeftPad[::2]
trainLeftPad_r = trainLeftPad[1::2]
trainRightPad_l = trainRightPad[::2]
trainRightPad_r = trainRightPad[1::2]
indices_test, testY, testLengths, normalized_test_length, testLeftPad, testRightPad = datasets[
1]
indices_test_l = indices_test[::2, :]
indices_test_r = indices_test[1::2, :]
testLengths_l = testLengths[::2]
testLengths_r = testLengths[1::2]
normalized_test_length_l = normalized_test_length[::2]
normalized_test_length_r = normalized_test_length[1::2]
testLeftPad_l = testLeftPad[::2]
testLeftPad_r = testLeftPad[1::2]
testRightPad_l = testRightPad[::2]
testRightPad_r = testRightPad[1::2]
n_train_batches = indices_train_l.shape[0] / batch_size
n_test_batches = indices_test_l.shape[0] / batch_size
train_batch_start = list(numpy.arange(n_train_batches) * batch_size)
test_batch_start = list(numpy.arange(n_test_batches) * batch_size)
indices_train_l = theano.shared(numpy.asarray(indices_train_l,
dtype=theano.config.floatX),
borrow=True)
indices_train_r = theano.shared(numpy.asarray(indices_train_r,
dtype=theano.config.floatX),
borrow=True)
indices_test_l = theano.shared(numpy.asarray(indices_test_l,
dtype=theano.config.floatX),
borrow=True)
indices_test_r = theano.shared(numpy.asarray(indices_test_r,
dtype=theano.config.floatX),
borrow=True)
indices_train_l = T.cast(indices_train_l, 'int32')
indices_train_r = T.cast(indices_train_r, 'int32')
indices_test_l = T.cast(indices_test_l, 'int32')
indices_test_r = T.cast(indices_test_r, 'int32')
rand_values = random_value_normal((vocab_size + 1, emb_size),
theano.config.floatX,
numpy.random.RandomState(1234))
rand_values[0] = numpy.array(numpy.zeros(emb_size))
#rand_values[0]=numpy.array([1e-50]*emb_size)
rand_values = load_word2vec_to_init(rand_values,
rootPath + 'vocab_embs_300d.txt')
embeddings = theano.shared(value=rand_values, borrow=True)
cost_tmp = 0
error_sum = 0
# allocate symbolic variables for the data
index = T.lscalar()
x_index_l = T.imatrix(
'x_index_l') # now, x is the index matrix, must be integer
x_index_r = T.imatrix('x_index_r')
y = T.ivector('y')
left_l = T.iscalar()
right_l = T.iscalar()
left_r = T.iscalar()
right_r = T.iscalar()
length_l = T.iscalar()
length_r = T.iscalar()
norm_length_l = T.dscalar()
norm_length_r = T.dscalar()
mts = T.dmatrix()
#x=embeddings[x_index.flatten()].reshape(((batch_size*4),maxSentLength, emb_size)).transpose(0, 2, 1).flatten()
ishape = (emb_size, maxSentLength) # this is the size of MNIST images
filter_size = (emb_size, window_width)
#poolsize1=(1, ishape[1]-filter_size[1]+1) #?????????????????????????????
length_after_wideConv = ishape[1] + filter_size[1] - 1
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
# Reshape matrix of rasterized images of shape (batch_size,28*28)
# to a 4D tensor, compatible with our LeNetConvPoolLayer
#layer0_input = x.reshape(((batch_size*4), 1, ishape[0], ishape[1]))
layer0_l_input = embeddings[x_index_l.flatten()].reshape(
(batch_size, maxSentLength,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_r_input = embeddings[x_index_r.flatten()].reshape(
(batch_size, maxSentLength,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
conv_W, conv_b = create_conv_para(rng,
filter_shape=(nkerns[0], 1,
filter_size[0],
filter_size[1]))
#layer0_output = debug_print(layer0.output, 'layer0.output')
layer0_l = Conv_with_input_para(rng,
input=layer0_l_input,
image_shape=(batch_size, 1, ishape[0],
ishape[1]),
filter_shape=(nkerns[0], 1, filter_size[0],
filter_size[1]),
W=conv_W,
b=conv_b)
layer0_r = Conv_with_input_para(rng,
input=layer0_r_input,
image_shape=(batch_size, 1, ishape[0],
ishape[1]),
filter_shape=(nkerns[0], 1, filter_size[0],
filter_size[1]),
W=conv_W,
b=conv_b)
layer0_l_output = debug_print(layer0_l.output, 'layer0_l.output')
layer0_r_output = debug_print(layer0_r.output, 'layer0_r.output')
layer0_para = [conv_W, conv_b]
layer1 = Average_Pooling(rng,
input_l=layer0_l_output,
input_r=layer0_r_output,
kern=nkerns[0],
left_l=left_l,
right_l=right_l,
left_r=left_r,
right_r=right_r,
length_l=length_l + filter_size[1] - 1,
length_r=length_r + filter_size[1] - 1,
dim=maxSentLength + filter_size[1] - 1,
window_size=window_width,
maxSentLength=maxSentLength)
conv2_W, conv2_b = create_conv_para(rng,
filter_shape=(nkerns[1], 1, nkerns[0],
filter_size[1]))
layer2_l = Conv_with_input_para(rng,
input=layer1.output_tensor_l,
image_shape=(batch_size, 1, nkerns[0],
ishape[1]),
filter_shape=(nkerns[1], 1, nkerns[0],
filter_size[1]),
W=conv2_W,
b=conv2_b)
layer2_r = Conv_with_input_para(rng,
input=layer1.output_tensor_r,
image_shape=(batch_size, 1, nkerns[0],
ishape[1]),
filter_shape=(nkerns[1], 1, nkerns[0],
filter_size[1]),
W=conv2_W,
b=conv2_b)
layer2_para = [conv2_W, conv2_b]
layer3 = Average_Pooling_for_batch1(rng,
input_l=layer2_l.output,
input_r=layer2_r.output,
kern=nkerns[1],
left_l=left_l,
right_l=right_l,
left_r=left_r,
right_r=right_r,
length_l=length_l + filter_size[1] - 1,
length_r=length_r + filter_size[1] - 1,
dim=maxSentLength + filter_size[1] - 1)
layer3_out = debug_print(layer3.output_simi, 'layer1_out')
#layer2=HiddenLayer(rng, input=layer1_out, n_in=nkerns[0]*2, n_out=hidden_size, activation=T.tanh)
sum_uni_l = T.sum(layer0_l_input, axis=3).reshape((1, emb_size))
#norm_uni_l=sum_uni_l/T.sqrt((sum_uni_l**2).sum())
sum_uni_r = T.sum(layer0_r_input, axis=3).reshape((1, emb_size))
#norm_uni_r=sum_uni_r/T.sqrt((sum_uni_r**2).sum())
'''
uni_cosine=cosine(sum_uni_l, sum_uni_r)
linear=Linear(sum_uni_l, sum_uni_r)
poly=Poly(sum_uni_l, sum_uni_r)
sigmoid=Sigmoid(sum_uni_l, sum_uni_r)
rbf=RBF(sum_uni_l, sum_uni_r)
gesd=GESD(sum_uni_l, sum_uni_r)
'''
eucli_1 = 1.0 / (1.0 + EUCLID(sum_uni_l, sum_uni_r)) #25.2%
#eucli_1=EUCLID(sum_uni_l, sum_uni_r)
len_l = norm_length_l.reshape((1, 1))
len_r = norm_length_r.reshape((1, 1))
#length_gap=T.log(1+(T.sqrt((len_l-len_r)**2))).reshape((1,1))
#length_gap=T.sqrt((len_l-len_r)**2)
#layer3_input=mts
layer4_input = T.concatenate(
[mts, eucli_1, layer1.output_eucli, layer3_out, len_l, len_r],
axis=1) #, layer2.output, layer1.output_cosine], axis=1)
#layer3_input=T.concatenate([mts,eucli, uni_cosine, len_l, len_r, norm_uni_l-(norm_uni_l+norm_uni_r)/2], axis=1)
#layer3=LogisticRegression(rng, input=layer3_input, n_in=11, n_out=2)
layer4 = LogisticRegression(rng,
input=layer4_input,
n_in=15 + 3 + 2,
n_out=2)
#L2_reg =(layer3.W** 2).sum()+(layer2.W** 2).sum()+(layer1.W** 2).sum()+(conv_W** 2).sum()
L2_reg = debug_print(
(layer4.W**2).sum() + (conv2_W**2).sum() + (conv_W**2).sum(),
'L2_reg') #+(layer1.W** 2).sum()
cost_this = debug_print(layer4.negative_log_likelihood(y),
'cost_this') #+L2_weight*L2_reg
cost = debug_print(
(cost_this + cost_tmp) / update_freq + L2_weight * L2_reg, 'cost')
test_model = theano.function(
[index], [layer4.errors(y), layer4.y_pred],
givens={
x_index_l: indices_test_l[index:index + batch_size],
x_index_r: indices_test_r[index:index + batch_size],
y: testY[index:index + batch_size],
left_l: testLeftPad_l[index],
right_l: testRightPad_l[index],
left_r: testLeftPad_r[index],
right_r: testRightPad_r[index],
length_l: testLengths_l[index],
length_r: testLengths_r[index],
norm_length_l: normalized_test_length_l[index],
norm_length_r: normalized_test_length_r[index],
mts: mt_test[index:index + batch_size]
},
on_unused_input='ignore')
#params = layer3.params + layer2.params + layer1.params+ [conv_W, conv_b]
params = layer4.params + layer2_para + layer0_para # + layer1.params
accumulator = []
for para_i in params:
eps_p = numpy.zeros_like(para_i.get_value(borrow=True),
dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
grad_i = debug_print(grad_i, 'grad_i')
#norm=T.sqrt((grad_i**2).sum())
#if T.lt(norm_threshold, norm):
# print 'big norm'
# grad_i=grad_i*(norm_threshold/norm)
acc = acc_i + T.sqr(grad_i)
updates.append(
(param_i,
param_i - learning_rate * grad_i / T.sqrt(acc))) #AdaGrad
updates.append((acc_i, acc))
train_model = theano.function(
[index], [cost, layer4.errors(y), layer4_input],
updates=updates,
givens={
x_index_l: indices_train_l[index:index + batch_size],
x_index_r: indices_train_r[index:index + batch_size],
y: trainY[index:index + batch_size],
left_l: trainLeftPad_l[index],
right_l: trainRightPad_l[index],
left_r: trainLeftPad_r[index],
right_r: trainRightPad_r[index],
length_l: trainLengths_l[index],
length_r: trainLengths_r[index],
norm_length_l: normalized_train_length_l[index],
norm_length_r: normalized_train_length_r[index],
mts: mt_train[index:index + batch_size]
},
on_unused_input='ignore')
train_model_predict = theano.function(
[index], [cost_this, layer4.errors(y)],
givens={
x_index_l: indices_train_l[index:index + batch_size],
x_index_r: indices_train_r[index:index + batch_size],
y: trainY[index:index + batch_size],
left_l: trainLeftPad_l[index],
right_l: trainRightPad_l[index],
left_r: trainLeftPad_r[index],
right_r: trainRightPad_r[index],
length_l: trainLengths_l[index],
length_r: trainLengths_r[index],
norm_length_l: normalized_train_length_l[index],
norm_length_r: normalized_train_length_r[index],
mts: mt_train[index:index + batch_size]
},
on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
patience_increase = 2 # wait this much longer when a new best is
# found
improvement_threshold = 0.995 # a relative improvement of this much is
# considered significant
validation_frequency = min(n_train_batches, patience / 2)
# go through this many
# minibatche before checking the network
# on the validation set; in this case we
# check every epoch
best_params = None
best_validation_loss = numpy.inf
best_iter = 0
test_score = 0.
start_time = time.clock()
epoch = 0
done_looping = False
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
#for minibatch_index in xrange(n_train_batches): # each batch
minibatch_index = 0
#shuffle(train_batch_start)#shuffle training data
for batch_start in train_batch_start:
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * n_train_batches + minibatch_index + 1
minibatch_index = minibatch_index + 1
#if epoch %2 ==0:
# batch_start=batch_start+remain_train
#time.sleep(0.5)
if iter % update_freq != 0:
cost_ij, error_ij = train_model_predict(batch_start)
#print 'cost_ij: ', cost_ij
cost_tmp += cost_ij
error_sum += error_ij
else:
cost_average, error_ij, layer3_input = train_model(batch_start)
#print 'training @ iter = '+str(iter)+' average cost: '+str(cost_average)+' sum error: '+str(error_sum)+'/'+str(update_freq)
error_sum = 0
cost_tmp = 0 #reset for the next batch
#print layer3_input
#exit(0)
#exit(0)
if iter % n_train_batches == 0:
print 'training @ iter = ' + str(
iter) + ' average cost: ' + str(
cost_average) + ' error: ' + str(
error_sum) + '/' + str(
update_freq) + ' error rate: ' + str(
error_sum * 1.0 / update_freq)
#if iter ==1:
# exit(0)
if iter % validation_frequency == 0:
#write_file=open('log.txt', 'w')
test_losses = []
for i in test_batch_start:
test_loss, pred_y = test_model(i)
#test_losses = [test_model(i) for i in test_batch_start]
test_losses.append(test_loss)
#write_file.write(str(pred_y[0])+'\n')#+'\t'+str(testY[i].eval())+
#write_file.close()
test_score = numpy.mean(test_losses)
print((
'\t\t\t\t\t\tepoch %i, minibatch %i/%i, test error of best '
'model %f %%') % (epoch, minibatch_index, n_train_batches,
test_score * 100.))
'''
#print 'validating & testing...'
# compute zero-one loss on validation set
validation_losses = []
for i in dev_batch_start:
time.sleep(0.5)
validation_losses.append(validate_model(i))
#validation_losses = [validate_model(i) for i in dev_batch_start]
this_validation_loss = numpy.mean(validation_losses)
print('\t\tepoch %i, minibatch %i/%i, validation error %f %%' % \
(epoch, minibatch_index , n_train_batches, \
this_validation_loss * 100.))
# if we got the best validation score until now
if this_validation_loss < best_validation_loss:
#improve patience if loss improvement is good enough
if this_validation_loss < best_validation_loss * \
improvement_threshold:
patience = max(patience, iter * patience_increase)
# save best validation score and iteration number
best_validation_loss = this_validation_loss
best_iter = iter
# test it on the test set
test_losses = [test_model(i) for i in test_batch_start]
test_score = numpy.mean(test_losses)
print(('\t\t\t\tepoch %i, minibatch %i/%i, test error of best '
'model %f %%') %
(epoch, minibatch_index, n_train_batches,
test_score * 100.))
'''
if patience <= iter:
done_looping = True
break
end_time = time.clock()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' + os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(learning_rate=0.09,
n_epochs=2000,
nkerns=[50, 50],
batch_size=1,
window_width=3,
maxSentLength=64,
maxDocLength=60,
emb_size=300,
hidden_size=200,
margin=0.5,
L2_weight=0.00065,
update_freq=1,
norm_threshold=5.0,
max_s_length=57,
max_d_length=59):
maxSentLength = max_s_length + 2 * (window_width - 1)
maxDocLength = max_d_length + 2 * (window_width - 1)
model_options = locals().copy()
print "model options", model_options
rootPath = '/mounts/data/proj/wenpeng/Dataset/MCTest/'
rng = numpy.random.RandomState(23455)
train_data, train_size, test_data, test_size, vocab_size = load_MCTest_corpus(
rootPath + 'vocab.txt', rootPath + 'mc500.train.tsv_standardlized.txt',
rootPath + 'mc500.test.tsv_standardlized.txt', max_s_length,
maxSentLength, maxDocLength) #vocab_size contain train, dev and test
#datasets_nonoverlap, vocab_size_nonoverlap=load_SICK_corpus(rootPath+'vocab_nonoverlap_train_plus_dev.txt', rootPath+'train_plus_dev_removed_overlap_as_training.txt', rootPath+'test_removed_overlap_as_training.txt', max_truncate_nonoverlap,maxSentLength_nonoverlap, entailment=True)
#datasets, vocab_size=load_wikiQA_corpus(rootPath+'vocab_lower_in_word2vec.txt', rootPath+'WikiQA-train.txt', rootPath+'test_filtered.txt', maxSentLength)#vocab_size contain train, dev and test
#mtPath='/mounts/data/proj/wenpeng/Dataset/WikiQACorpus/MT/BLEU_NIST/'
# mt_train, mt_test=load_mts_wikiQA(rootPath+'Train_plus_dev_MT/concate_14mt_train.txt', rootPath+'Test_MT/concate_14mt_test.txt')
# extra_train, extra_test=load_extra_features(rootPath+'train_plus_dev_rule_features_cosine_eucli_negation_len1_len2_syn_hyper1_hyper2_anto(newsimi0.4).txt', rootPath+'test_rule_features_cosine_eucli_negation_len1_len2_syn_hyper1_hyper2_anto(newsimi0.4).txt')
# discri_train, discri_test=load_extra_features(rootPath+'train_plus_dev_discri_features_0.3.txt', rootPath+'test_discri_features_0.3.txt')
#wm_train, wm_test=load_wmf_wikiQA(rootPath+'train_word_matching_scores.txt', rootPath+'test_word_matching_scores.txt')
#wm_train, wm_test=load_wmf_wikiQA(rootPath+'train_word_matching_scores_normalized.txt', rootPath+'test_word_matching_scores_normalized.txt')
[
train_data_D, train_data_Q, train_data_A, train_Y, train_Label,
train_Length_D, train_Length_D_s, train_Length_Q, train_Length_A,
train_leftPad_D, train_leftPad_D_s, train_leftPad_Q, train_leftPad_A,
train_rightPad_D, train_rightPad_D_s, train_rightPad_Q,
train_rightPad_A
] = train_data
[
test_data_D, test_data_Q, test_data_A, test_Y, test_Label,
test_Length_D, test_Length_D_s, test_Length_Q, test_Length_A,
test_leftPad_D, test_leftPad_D_s, test_leftPad_Q, test_leftPad_A,
test_rightPad_D, test_rightPad_D_s, test_rightPad_Q, test_rightPad_A
] = test_data
n_train_batches = train_size / batch_size
n_test_batches = test_size / batch_size
train_batch_start = list(numpy.arange(n_train_batches) * batch_size)
test_batch_start = list(numpy.arange(n_test_batches) * batch_size)
# indices_train_l=theano.shared(numpy.asarray(indices_train_l, dtype=theano.config.floatX), borrow=True)
# indices_train_r=theano.shared(numpy.asarray(indices_train_r, dtype=theano.config.floatX), borrow=True)
# indices_test_l=theano.shared(numpy.asarray(indices_test_l, dtype=theano.config.floatX), borrow=True)
# indices_test_r=theano.shared(numpy.asarray(indices_test_r, dtype=theano.config.floatX), borrow=True)
# indices_train_l=T.cast(indices_train_l, 'int64')
# indices_train_r=T.cast(indices_train_r, 'int64')
# indices_test_l=T.cast(indices_test_l, 'int64')
# indices_test_r=T.cast(indices_test_r, 'int64')
rand_values = random_value_normal((vocab_size + 1, emb_size),
theano.config.floatX,
numpy.random.RandomState(1234))
rand_values[0] = numpy.array(numpy.zeros(emb_size),
dtype=theano.config.floatX)
#rand_values[0]=numpy.array([1e-50]*emb_size)
rand_values = load_word2vec_to_init(rand_values,
rootPath + 'vocab_embs_300d.txt')
#rand_values=load_word2vec_to_init(rand_values, rootPath+'vocab_lower_in_word2vec_embs_300d.txt')
embeddings = theano.shared(value=rand_values, borrow=True)
#cost_tmp=0
error_sum = 0
# allocate symbolic variables for the data
index = T.lscalar()
index_D = T.lmatrix() # now, x is the index matrix, must be integer
index_Q = T.lvector()
index_A = T.lvector()
y = T.lvector()
len_D = T.lscalar()
len_D_s = T.lvector()
len_Q = T.lscalar()
len_A = T.lscalar()
left_D = T.lscalar()
left_D_s = T.lvector()
left_Q = T.lscalar()
left_A = T.lscalar()
right_D = T.lscalar()
right_D_s = T.lvector()
right_Q = T.lscalar()
right_A = T.lscalar()
#wmf=T.dmatrix()
cost_tmp = T.dscalar()
#x=embeddings[x_index.flatten()].reshape(((batch_size*4),maxSentLength, emb_size)).transpose(0, 2, 1).flatten()
ishape = (emb_size, maxSentLength) # sentence shape
dshape = (nkerns[0], maxDocLength) # doc shape
filter_words = (emb_size, window_width)
filter_sents = (nkerns[0], window_width)
#poolsize1=(1, ishape[1]-filter_size[1]+1) #?????????????????????????????
# length_after_wideConv=ishape[1]+filter_size[1]-1
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
# Reshape matrix of rasterized images of shape (batch_size,28*28)
# to a 4D tensor, compatible with our LeNetConvPoolLayer
#layer0_input = x.reshape(((batch_size*4), 1, ishape[0], ishape[1]))
layer0_D_input = embeddings[index_D.flatten()].reshape(
(maxDocLength, maxSentLength,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_Q_input = embeddings[index_Q.flatten()].reshape(
(batch_size, maxSentLength,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_A_input = embeddings[index_A.flatten()].reshape(
(batch_size, maxSentLength,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
conv_W, conv_b = create_conv_para(rng,
filter_shape=(nkerns[0], 1,
filter_words[0],
filter_words[1]))
# load_model_for_conv1([conv_W, conv_b])
layer0_D = Conv_with_input_para(
rng,
input=layer0_D_input,
image_shape=(maxDocLength, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]),
W=conv_W,
b=conv_b)
layer0_Q = Conv_with_input_para(
rng,
input=layer0_Q_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]),
W=conv_W,
b=conv_b)
layer0_A = Conv_with_input_para(
rng,
input=layer0_A_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]),
W=conv_W,
b=conv_b)
layer0_D_output = debug_print(layer0_D.output, 'layer0_D.output')
layer0_Q_output = debug_print(layer0_Q.output, 'layer0_Q.output')
layer0_A_output = debug_print(layer0_A.output, 'layer0_A.output')
layer0_para = [conv_W, conv_b]
layer1_DQ = Average_Pooling_Scan(rng,
input_D=layer0_D_output,
input_r=layer0_Q_output,
kern=nkerns[0],
left_D=left_D,
right_D=right_D,
left_D_s=left_D_s,
right_D_s=right_D_s,
left_r=left_Q,
right_r=right_Q,
length_D_s=len_D_s + filter_words[1] - 1,
length_r=len_Q + filter_words[1] - 1,
dim=maxSentLength + filter_words[1] - 1,
doc_len=maxDocLength,
topk=3)
layer1_DA = Average_Pooling_Scan(rng,
input_D=layer0_D_output,
input_r=layer0_A_output,
kern=nkerns[0],
left_D=left_D,
right_D=right_D,
left_D_s=left_D_s,
right_D_s=right_D_s,
left_r=left_A,
right_r=right_A,
length_D_s=len_D_s + filter_words[1] - 1,
length_r=len_A + filter_words[1] - 1,
dim=maxSentLength + filter_words[1] - 1,
doc_len=maxDocLength,
topk=3)
conv2_W, conv2_b = create_conv_para(rng,
filter_shape=(nkerns[1], 1, nkerns[0],
filter_sents[1]))
#load_model_for_conv2([conv2_W, conv2_b])#this can not be used, as the nkerns[0]!=filter_size[0]
#conv from sentence to doc
layer2_DQ = Conv_with_input_para(
rng,
input=layer1_DQ.output_D.reshape(
(batch_size, 1, nkerns[0], dshape[1])),
image_shape=(batch_size, 1, nkerns[0], dshape[1]),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]),
W=conv2_W,
b=conv2_b)
layer2_DA = Conv_with_input_para(
rng,
input=layer1_DA.output_D.reshape(
(batch_size, 1, nkerns[0], dshape[1])),
image_shape=(batch_size, 1, nkerns[0], dshape[1]),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]),
W=conv2_W,
b=conv2_b)
#conv single Q and A into doc level with same conv weights
layer2_Q = Conv_with_input_para_one_col_featuremap(
rng,
input=layer1_DQ.output_QA_sent_level_rep.reshape(
(batch_size, 1, nkerns[0], 1)),
image_shape=(batch_size, 1, nkerns[0], 1),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]),
W=conv2_W,
b=conv2_b)
layer2_A = Conv_with_input_para_one_col_featuremap(
rng,
input=layer1_DA.output_QA_sent_level_rep.reshape(
(batch_size, 1, nkerns[0], 1)),
image_shape=(batch_size, 1, nkerns[0], 1),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]),
W=conv2_W,
b=conv2_b)
layer2_Q_output_sent_rep_Dlevel = debug_print(
layer2_Q.output_sent_rep_Dlevel, 'layer2_Q.output_sent_rep_Dlevel')
layer2_A_output_sent_rep_Dlevel = debug_print(
layer2_A.output_sent_rep_Dlevel, 'layer2_A.output_sent_rep_Dlevel')
layer2_para = [conv2_W, conv2_b]
layer3_DQ = Average_Pooling_for_Top(
rng,
input_l=layer2_DQ.output,
input_r=layer2_Q_output_sent_rep_Dlevel,
kern=nkerns[1],
left_l=left_D,
right_l=right_D,
left_r=0,
right_r=0,
length_l=len_D + filter_sents[1] - 1,
length_r=1,
dim=maxDocLength + filter_sents[1] - 1,
topk=3)
layer3_DA = Average_Pooling_for_Top(
rng,
input_l=layer2_DA.output,
input_r=layer2_A_output_sent_rep_Dlevel,
kern=nkerns[1],
left_l=left_D,
right_l=right_D,
left_r=0,
right_r=0,
length_l=len_D + filter_sents[1] - 1,
length_r=1,
dim=maxDocLength + filter_sents[1] - 1,
topk=3)
#high-way
high_W, high_b = create_highw_para(rng, nkerns[0], nkerns[1])
transform_gate_DQ = debug_print(
T.nnet.sigmoid(
T.dot(high_W, layer1_DQ.output_D_sent_level_rep) + high_b),
'transform_gate_DQ')
transform_gate_DA = debug_print(
T.nnet.sigmoid(
T.dot(high_W, layer1_DA.output_D_sent_level_rep) + high_b),
'transform_gate_DA')
transform_gate_Q = debug_print(
T.nnet.sigmoid(
T.dot(high_W, layer1_DQ.output_QA_sent_level_rep) + high_b),
'transform_gate_Q')
transform_gate_A = debug_print(
T.nnet.sigmoid(
T.dot(high_W, layer1_DA.output_QA_sent_level_rep) + high_b),
'transform_gate_A')
highW_para = [high_W, high_b]
overall_D_Q = debug_print(
(1.0 - transform_gate_DQ) * layer1_DQ.output_D_sent_level_rep +
transform_gate_DQ * layer3_DQ.output_D_doc_level_rep, 'overall_D_Q')
overall_D_A = (
1.0 - transform_gate_DA
) * layer1_DA.output_D_sent_level_rep + transform_gate_DA * layer3_DA.output_D_doc_level_rep
overall_Q = (
1.0 - transform_gate_Q
) * layer1_DQ.output_QA_sent_level_rep + transform_gate_Q * layer2_Q.output_sent_rep_Dlevel
overall_A = (
1.0 - transform_gate_A
) * layer1_DA.output_QA_sent_level_rep + transform_gate_A * layer2_A.output_sent_rep_Dlevel
simi_sent_level = debug_print(
cosine(
layer1_DQ.output_D_sent_level_rep +
layer1_DA.output_D_sent_level_rep,
layer1_DQ.output_QA_sent_level_rep +
layer1_DA.output_QA_sent_level_rep), 'simi_sent_level')
simi_doc_level = debug_print(
cosine(
layer3_DQ.output_D_doc_level_rep +
layer3_DA.output_D_doc_level_rep,
layer2_Q.output_sent_rep_Dlevel + layer2_A.output_sent_rep_Dlevel),
'simi_doc_level')
simi_overall_level = debug_print(
cosine(overall_D_Q + overall_D_A, overall_Q + overall_A),
'simi_overall_level')
# eucli_1=1.0/(1.0+EUCLID(layer3_DQ.output_D+layer3_DA.output_D, layer3_DQ.output_QA+layer3_DA.output_QA))
layer4_input = debug_print(
T.concatenate([simi_sent_level, simi_doc_level, simi_overall_level],
axis=1),
'layer4_input') #, layer2.output, layer1.output_cosine], axis=1)
#layer3_input=T.concatenate([mts,eucli, uni_cosine, len_l, len_r, norm_uni_l-(norm_uni_l+norm_uni_r)/2], axis=1)
#layer3=LogisticRegression(rng, input=layer3_input, n_in=11, n_out=2)
layer4 = LogisticRegression(rng, input=layer4_input, n_in=3, n_out=2)
#L2_reg =(layer3.W** 2).sum()+(layer2.W** 2).sum()+(layer1.W** 2).sum()+(conv_W** 2).sum()
L2_reg = debug_print(
(layer4.W**2).sum() + (high_W**2).sum() + (conv2_W**2).sum() +
(conv_W**2).sum(),
'L2_reg') #+(layer1.W** 2).sum()++(embeddings**2).sum()
cost_this = debug_print(layer4.negative_log_likelihood(y),
'cost_this') #+L2_weight*L2_reg
cost = debug_print(
(cost_this + cost_tmp) / update_freq + L2_weight * L2_reg, 'cost')
#cost=debug_print((cost_this+cost_tmp)/update_freq, 'cost')
#
# [train_data_D, train_data_Q, train_data_A, train_Y, train_Label,
# train_Length_D,train_Length_D_s, train_Length_Q, train_Length_A,
# train_leftPad_D,train_leftPad_D_s, train_leftPad_Q, train_leftPad_A,
# train_rightPad_D,train_rightPad_D_s, train_rightPad_Q, train_rightPad_A]=train_data
# [test_data_D, test_data_Q, test_data_A, test_Y, test_Label,
# test_Length_D,test_Length_D_s, test_Length_Q, test_Length_A,
# test_leftPad_D,test_leftPad_D_s, test_leftPad_Q, test_leftPad_A,
# test_rightPad_D,test_rightPad_D_s, test_rightPad_Q, test_rightPad_A]=test_data
# index = T.lscalar()
# index_D = T.lmatrix() # now, x is the index matrix, must be integer
# index_Q = T.lvector()
# index_A= T.lvector()
#
# y = T.lvector()
# len_D=T.lscalar()
# len_D_s=T.lvector()
# len_Q=T.lscalar()
# len_A=T.lscalar()
#
# left_D=T.lscalar()
# left_D_s=T.lvector()
# left_Q=T.lscalar()
# left_A=T.lscalar()
#
# right_D=T.lscalar()
# right_D_s=T.lvector()
# right_Q=T.lscalar()
# right_A=T.lscalar()
#
#
# #wmf=T.dmatrix()
# cost_tmp=T.dscalar()
test_model = theano.function(
[index],
[layer4.errors(y), layer4_input, y, layer4.prop_for_posi],
givens={
index_D: test_data_D[index], #a matrix
index_Q: test_data_Q[index],
index_A: test_data_A[index],
y: test_Y[index:index + batch_size],
len_D: test_Length_D[index],
len_D_s: test_Length_D_s[index],
len_Q: test_Length_Q[index],
len_A: test_Length_A[index],
left_D: test_leftPad_D[index],
left_D_s: test_leftPad_D_s[index],
left_Q: test_leftPad_Q[index],
left_A: test_leftPad_A[index],
right_D: test_rightPad_D[index],
right_D_s: test_rightPad_D_s[index],
right_Q: test_rightPad_Q[index],
right_A: test_rightPad_A[index]
},
on_unused_input='ignore')
#params = layer3.params + layer2.params + layer1.params+ [conv_W, conv_b]
params = layer4.params + layer2_para + layer0_para + highW_para
accumulator = []
for para_i in params:
eps_p = numpy.zeros_like(para_i.get_value(borrow=True),
dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
grad_i = debug_print(grad_i, 'grad_i')
acc = acc_i + T.sqr(grad_i)
updates.append(
(param_i,
param_i - learning_rate * grad_i / T.sqrt(acc))) #AdaGrad
updates.append((acc_i, acc))
train_model = theano.function(
[index, cost_tmp],
cost,
updates=updates,
givens={
index_D: train_data_D[index],
index_Q: train_data_Q[index],
index_A: train_data_A[index],
y: train_Y[index:index + batch_size],
len_D: train_Length_D[index],
len_D_s: train_Length_D_s[index],
len_Q: train_Length_Q[index],
len_A: train_Length_A[index],
left_D: train_leftPad_D[index],
left_D_s: train_leftPad_D_s[index],
left_Q: train_leftPad_Q[index],
left_A: train_leftPad_A[index],
right_D: train_rightPad_D[index],
right_D_s: train_rightPad_D_s[index],
right_Q: train_rightPad_Q[index],
right_A: train_rightPad_A[index]
},
on_unused_input='ignore')
train_model_predict = theano.function(
[index], [cost_this, layer4.errors(y), layer4_input, y],
givens={
index_D: train_data_D[index],
index_Q: train_data_Q[index],
index_A: train_data_A[index],
y: train_Y[index:index + batch_size],
len_D: train_Length_D[index],
len_D_s: train_Length_D_s[index],
len_Q: train_Length_Q[index],
len_A: train_Length_A[index],
left_D: train_leftPad_D[index],
left_D_s: train_leftPad_D_s[index],
left_Q: train_leftPad_Q[index],
left_A: train_leftPad_A[index],
right_D: train_rightPad_D[index],
right_D_s: train_rightPad_D_s[index],
right_Q: train_rightPad_Q[index],
right_A: train_rightPad_A[index]
},
on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
patience_increase = 2 # wait this much longer when a new best is
# found
improvement_threshold = 0.995 # a relative improvement of this much is
# considered significant
validation_frequency = min(n_train_batches, patience / 2)
# go through this many
# minibatche before checking the network
# on the validation set; in this case we
# check every epoch
best_params = None
best_validation_loss = numpy.inf
best_iter = 0
test_score = 0.
start_time = time.clock()
mid_time = start_time
epoch = 0
done_looping = False
max_acc = 0.0
best_epoch = 0
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
#for minibatch_index in xrange(n_train_batches): # each batch
minibatch_index = 0
#shuffle(train_batch_start)#shuffle training data
cost_tmp = 0.0
# readfile=open('/mounts/data/proj/wenpeng/Dataset/SICK/train_plus_dev.txt', 'r')
# train_pairs=[]
# train_y=[]
# for line in readfile:
# tokens=line.strip().split('\t')
# listt=tokens[0]+'\t'+tokens[1]
# train_pairs.append(listt)
# train_y.append(tokens[2])
# readfile.close()
# writefile=open('/mounts/data/proj/wenpeng/Dataset/SICK/weights_fine_tune.txt', 'w')
for batch_start in train_batch_start:
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * n_train_batches + minibatch_index + 1
sys.stdout.write("Training :[%6f] %% complete!\r" %
(batch_start * 100.0 / train_size))
sys.stdout.flush()
minibatch_index = minibatch_index + 1
#if epoch %2 ==0:
# batch_start=batch_start+remain_train
#time.sleep(0.5)
#print batch_start
if iter % update_freq != 0:
cost_ij, error_ij, layer3_input, y = train_model_predict(
batch_start)
#print 'layer3_input', layer3_input
cost_tmp += cost_ij
error_sum += error_ij
else:
cost_average = train_model(batch_start, cost_tmp)
#print 'layer3_input', layer3_input
error_sum = 0
cost_tmp = 0.0 #reset for the next batch
#print 'cost_average ', cost_average
#print 'cost_this ',cost_this
#exit(0)
#exit(0)
if iter % n_train_batches == 0:
print 'training @ iter = ' + str(
iter) + ' average cost: ' + str(cost_average)
if iter % validation_frequency == 0:
#write_file=open('log.txt', 'w')
test_losses = []
test_y = []
test_features = []
test_prop = []
for i in test_batch_start:
test_loss, layer3_input, y, posi_prop = test_model(i)
test_prop.append(posi_prop[0][0])
#test_losses = [test_model(i) for i in test_batch_start]
test_losses.append(test_loss)
test_y.append(y[0])
test_features.append(layer3_input[0])
#write_file.write(str(pred_y[0])+'\n')#+'\t'+str(testY[i].eval())+
#write_file.close()
#test_score = numpy.mean(test_losses)
test_acc = compute_test_acc(test_y, test_prop)
#test_acc=1-test_score
print(
('\t\t\tepoch %i, minibatch %i/%i, test acc of best '
'model %f %%') %
(epoch, minibatch_index, n_train_batches, test_acc * 100.))
#now, see the results of LR
#write_feature=open(rootPath+'feature_check.txt', 'w')
train_y = []
train_features = []
count = 0
for batch_start in train_batch_start:
cost_ij, error_ij, layer3_input, y = train_model_predict(
batch_start)
train_y.append(y[0])
train_features.append(layer3_input[0])
#write_feature.write(str(batch_start)+' '+' '.join(map(str,layer3_input[0]))+'\n')
#count+=1
#write_feature.close()
clf = svm.SVC(
kernel='linear'
) #OneVsRestClassifier(LinearSVC()) #linear 76.11%, poly 75.19, sigmoid 66.50, rbf 73.33
clf.fit(train_features, train_y)
results = clf.decision_function(test_features)
lr = linear_model.LogisticRegression(C=1e5)
lr.fit(train_features, train_y)
results_lr = lr.decision_function(test_features)
acc_svm = compute_test_acc(test_y, results)
acc_lr = compute_test_acc(test_y, results_lr)
find_better = False
if acc_svm > max_acc:
max_acc = acc_svm
best_epoch = epoch
find_better = True
if test_acc > max_acc:
max_acc = test_acc
best_epoch = epoch
find_better = True
if acc_lr > max_acc:
max_acc = acc_lr
best_epoch = epoch
find_better = True
print '\t\t\tsvm:', acc_svm, 'lr:', acc_lr, 'nn:', test_acc, 'max:', max_acc, '(at', best_epoch, ')'
# if find_better==True:
# store_model_to_file(layer2_para, best_epoch)
# print 'Finished storing best conv params'
if patience <= iter:
done_looping = True
break
print 'Epoch ', epoch, 'uses ', (time.clock() - mid_time) / 60.0, 'min'
mid_time = time.clock()
#writefile.close()
#print 'Batch_size: ', update_freq
end_time = time.clock()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' + os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(claim, title2sentlist, title2wordlist, word2id):
learning_rate = 0.02
n_epochs = 100
emb_size = 300
batch_size = 1 #50
filter_size = [3]
sent_len = 40
claim_len = 40
cand_size = 10
hidden_size = [300, 300]
max_pred_pick = 5
# model_options = locals().copy()
# print("model options", model_options)
# print('title2sentlist len', len(title2sentlist))
# print('title2wordlist len', len(title2wordlist))
pred_id2label = {1: 'SUPPORTS', 0: 'REFUTES', 2: 'NOT ENOUGH INFO'}
seed = 1234
np.random.seed(seed)
rng = np.random.RandomState(
seed) #random seed, control the model generates the same results
srng = T.shared_randomstreams.RandomStreams(rng.randint(seed))
claim_idlist, claim_masklist, sent_ins_ids, sent_ins_mask, sent_cand_list = claim_input_2_theano_input(
claim, word2id, claim_len, sent_len, cand_size, title2sentlist,
title2wordlist)
test_claims = np.asarray([claim_idlist], dtype='int32')
test_claim_mask = np.asarray([claim_masklist], dtype=theano.config.floatX)
test_sents = np.asarray([sent_ins_ids], dtype='int32')
test_sent_masks = np.asarray([sent_ins_mask], dtype=theano.config.floatX)
vocab_size = len(word2id) + 1
rand_values = rng.normal(
0.0, 0.01,
(vocab_size, emb_size)) #generate a matrix by Gaussian distribution
# id2word = {y:x for x,y in word2id.items()}
# word2vec=load_word2vec()
# rand_values=load_word2vec_to_init(rand_values, id2word, word2vec)
init_embeddings = theano.shared(
value=np.array(rand_values, dtype=theano.config.floatX), borrow=True
) #wrap up the python variable "rand_values" into theano variable
'''
the first block for evidence identification in two classes (support & reject)
the second block for textual entailment: given evidence labels, predict the claim labels
'''
sents_ids = T.itensor3() #(batch, cand_size, sent_len)
sents_mask = T.ftensor3()
# sents_labels=T.imatrix() #(batch, cand_size)
claim_ids = T.imatrix() #(batch, claim_len)
claim_mask = T.fmatrix()
# joint_sents_ids=T.itensor3() #(batch, cand_size, sent_len)
# joint_sents_mask=T.ftensor3()
# # joint_sents_labels=T.imatrix() #(batch, cand_size)
# joint_claim_ids = T.imatrix() #(batch, claim_len)
# joint_claim_mask = T.fmatrix()
# joint_labels=T.ivector()
######################
# BUILD ACTUAL MODEL #
######################
print('... building the model')
embed_input_sents = init_embeddings[sents_ids.flatten(
)].reshape((batch_size * cand_size, sent_len, emb_size)).dimshuffle(
0, 2, 1
) #embed_input(init_embeddings, sents_ids_l)#embeddings[sents_ids_l.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1) #the input format can be adapted into CNN or GRU or LSTM
embed_input_claim = init_embeddings[claim_ids.flatten()].reshape(
(batch_size, claim_len, emb_size)).dimshuffle(0, 2, 1)
"shared parameters"
conv_W, conv_b = create_conv_para(rng,
filter_shape=(hidden_size[0], 1,
emb_size, filter_size[0]))
"tasl 1 parameters"
task1_att_conv_W, task1_att_conv_b = create_conv_para(
rng, filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]))
task1_conv_W_context, task1_conv_b_context = create_conv_para(
rng, filter_shape=(hidden_size[0], 1, emb_size, 1))
"task 2 parameters"
att_conv_W, att_conv_b = create_conv_para(rng,
filter_shape=(hidden_size[0], 1,
emb_size,
filter_size[0]))
conv_W_context, conv_b_context = create_conv_para(
rng, filter_shape=(hidden_size[0], 1, emb_size, 1))
NN_para = [
conv_W, conv_b, task1_att_conv_W, task1_att_conv_b, att_conv_W,
att_conv_b, task1_conv_W_context, conv_W_context
]
conv_model_sents = Conv_with_Mask(
rng,
input_tensor3=embed_input_sents,
mask_matrix=sents_mask.reshape(
(sents_mask.shape[0] * sents_mask.shape[1], sents_mask.shape[2])),
image_shape=(batch_size * cand_size, 1, emb_size, sent_len),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
W=conv_W,
b=conv_b
) #mutiple mask with the conv_out to set the features by UNK to zero
sent_embeddings = conv_model_sents.maxpool_vec #(batch_size*cand_size, hidden_size) # each sentence then have an embedding of length hidden_size
batch_sent_emb = sent_embeddings.reshape(
(batch_size, cand_size, hidden_size[0]))
conv_model_claims = Conv_with_Mask(
rng,
input_tensor3=embed_input_claim,
mask_matrix=claim_mask,
image_shape=(batch_size, 1, emb_size, claim_len),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
W=conv_W,
b=conv_b
) #mutiple mask with the conv_out to set the features by UNK to zero
claim_embeddings = conv_model_claims.maxpool_vec #(batch_size, hidden_size) # each sentence then have an embedding of length hidden_size
batch_claim_emb = T.repeat(claim_embeddings.dimshuffle(0, 'x', 1),
cand_size,
axis=1)
'''
attentive conv for task1
'''
task1_attentive_conv_layer = Attentive_Conv_for_Pair_easy_version(
rng,
input_tensor3=
embed_input_sents, #batch_size*cand_size, emb_size, sent_len
input_tensor3_r=T.repeat(embed_input_claim, cand_size, axis=0),
mask_matrix=sents_mask.reshape(
(sents_mask.shape[0] * sents_mask.shape[1], sents_mask.shape[2])),
mask_matrix_r=T.repeat(claim_mask, cand_size, axis=0),
image_shape=(batch_size * cand_size, 1, emb_size, sent_len),
image_shape_r=(batch_size * cand_size, 1, emb_size, claim_len),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[0], 1, emb_size, 1),
W=task1_att_conv_W,
b=task1_att_conv_b,
W_context=task1_conv_W_context,
b_context=task1_conv_b_context)
task1_attentive_sent_embeddings_l = task1_attentive_conv_layer.attentive_maxpool_vec_l #(batch_size*cand_size, hidden_size)
task1_attentive_sent_embeddings_r = task1_attentive_conv_layer.attentive_maxpool_vec_r
concate_claim_sent = T.concatenate([
batch_claim_emb, batch_sent_emb,
T.sum(batch_claim_emb * batch_sent_emb, axis=2).dimshuffle(0, 1, 'x')
],
axis=2)
concate_2_matrix = concate_claim_sent.reshape(
(batch_size * cand_size, hidden_size[0] * 2 + 1))
"to score each evidence sentence, we use the output of attentiveConv, as well as the output of standard CNN"
LR_input = T.concatenate([
concate_2_matrix, task1_attentive_sent_embeddings_l,
task1_attentive_sent_embeddings_r
],
axis=1)
LR_input_size = hidden_size[0] * 2 + 1 + hidden_size[0] * 2
# LR_input = concate_2_matrix
# LR_input_size = hidden_size[0]*2+1
#classification layer, it is just mapping from a feature vector of size "hidden_size" to a vector of only two values: positive, negative
U_a = create_ensemble_para(
rng, 1, LR_input_size) # the weight matrix hidden_size*2
# LR_b = theano.shared(value=np.zeros((8,),dtype=theano.config.floatX),name='LR_b', borrow=True) #bias for each target class
LR_para = [U_a]
# layer_LR=LogisticRegression(rng, input=LR_input, n_in=LR_input_size, n_out=8, W=U_a, b=LR_b) #basically it is a multiplication between weight matrix and input feature vector
score_matrix = T.nnet.sigmoid(LR_input.dot(U_a)) #batch * 12
inter_matrix = score_matrix.reshape((batch_size, cand_size))
# inter_sent_claim = T.batched_dot(batch_sent_emb, batch_claim_emb) #(batch_size, cand_size, 1)
# inter_matrix = T.nnet.sigmoid(inter_sent_claim.reshape((batch_size, cand_size)))
'''
maybe 1.0-inter_matrix can be rewritten into 1/e^(inter_matrix)
'''
binarize_prob = T.where(inter_matrix > 0.5, 1, 0) #(batch_size, cand_size)
sents_labels = inter_matrix * binarize_prob
'''
training task2, predict 3 labels
'''
# joint_embed_input_sents=init_embeddings[joint_sents_ids.flatten()].reshape((batch_size*cand_size, sent_len, emb_size)).dimshuffle(0,2,1)#embed_input(init_embeddings, sents_ids_l)#embeddings[sents_ids_l.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1) #the input format can be adapted into CNN or GRU or LSTM
# joint_embed_input_claim=init_embeddings[joint_claim_ids.flatten()].reshape((batch_size,claim_len, emb_size)).dimshuffle(0,2,1)
# joint_conv_model_sents = Conv_with_Mask(rng, input_tensor3=joint_embed_input_sents,
# mask_matrix = joint_sents_mask.reshape((joint_sents_mask.shape[0]*joint_sents_mask.shape[1],joint_sents_mask.shape[2])),
# image_shape=(batch_size*cand_size, 1, emb_size, sent_len),
# filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]), W=conv_W, b=conv_b) #mutiple mask with the conv_out to set the features by UNK to zero
# joint_sent_embeddings=joint_conv_model_sents.maxpool_vec #(batch_size*cand_size, hidden_size) # each sentence then have an embedding of length hidden_size
# joint_batch_sent_emb = joint_sent_embeddings.reshape((batch_size, cand_size, hidden_size[0]))
# "??? use joint_sents_labels means the evidence labels are not provided by task 1?"
# joint_premise_emb = T.sum(joint_batch_sent_emb*joint_sents_labels.dimshuffle(0,1,'x'), axis=1) #(batch, hidden_size)
premise_emb = T.sum(batch_sent_emb * sents_labels.dimshuffle(0, 1, 'x'),
axis=1)
# joint_conv_model_claims = Conv_with_Mask(rng, input_tensor3=joint_embed_input_claim,
# mask_matrix = joint_claim_mask,
# image_shape=(batch_size, 1, emb_size, claim_len),
# filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]), W=conv_W, b=conv_b) #mutiple mask with the conv_out to set the features by UNK to zero
# joint_claim_embeddings=joint_conv_model_claims.maxpool_vec #(batch_size, hidden_size) # each sentence then have an embedding of length hidden_size
premise_hypo_emb = T.concatenate([premise_emb, claim_embeddings],
axis=1) #(batch, 2*hidden_size)
'''
attentive conv in task2
'''
sents_tensor3 = embed_input_sents.dimshuffle(0, 2, 1).reshape(
(batch_size, cand_size * sent_len, emb_size))
sents_dot = T.batched_dot(sents_tensor3, sents_tensor3.dimshuffle(
0, 2, 1)) #(batch_size, cand_size*sent_len, cand_size*sent_len)
sents_dot_2_matrix = T.nnet.softmax(
sents_dot.reshape(
(batch_size * cand_size * sent_len, cand_size * sent_len)))
sents_context = T.batched_dot(
sents_dot_2_matrix.reshape(
(batch_size, cand_size * sent_len, cand_size * sent_len)),
sents_tensor3) #(batch_size, cand_size*sent_len, emb_size)
add_sents_context = embed_input_sents + sents_context.reshape(
(batch_size * cand_size, sent_len, emb_size)
).dimshuffle(
0, 2, 1
) #T.concatenate([joint_embed_input_sents, joint_sents_context.reshape((batch_size*cand_size, sent_len, emb_size)).dimshuffle(0,2,1)], axis=1) #(batch_size*cand_size, 2*emb_size, sent_len)
attentive_conv_layer = Attentive_Conv_for_Pair_easy_version(
rng,
input_tensor3=
add_sents_context, #batch_size*cand_size, 2*emb_size, sent_len
input_tensor3_r=T.repeat(embed_input_claim, cand_size, axis=0),
mask_matrix=sents_mask.reshape(
(sents_mask.shape[0] * sents_mask.shape[1], sents_mask.shape[2])),
mask_matrix_r=T.repeat(claim_mask, cand_size, axis=0),
image_shape=(batch_size * cand_size, 1, emb_size, sent_len),
image_shape_r=(batch_size * cand_size, 1, emb_size, claim_len),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[0], 1, emb_size, 1),
W=att_conv_W,
b=att_conv_b,
W_context=conv_W_context,
b_context=conv_b_context)
attentive_sent_embeddings_l = attentive_conv_layer.attentive_maxpool_vec_l.reshape(
(batch_size, cand_size,
hidden_size[0])) #(batch_size*cand_size, hidden_size)
attentive_sent_embeddings_r = attentive_conv_layer.attentive_maxpool_vec_r.reshape(
(batch_size, cand_size, hidden_size[0]))
masked_sents_attconv = attentive_sent_embeddings_l * sents_labels.dimshuffle(
0, 1, 'x')
masked_claim_attconv = attentive_sent_embeddings_r * sents_labels.dimshuffle(
0, 1, 'x')
fine_max = T.concatenate([
T.max(masked_sents_attconv, axis=1),
T.max(masked_claim_attconv, axis=1)
],
axis=1) #(batch, 2*hidden)
# fine_sum = T.concatenate([T.sum(masked_sents_attconv, axis=1),T.sum(masked_claim_attconv, axis=1)],axis=1) #(batch, 2*hidden)
"Logistic Regression layer"
joint_LR_input = T.concatenate([premise_hypo_emb, fine_max], axis=1)
joint_LR_input_size = 2 * hidden_size[0] + 2 * hidden_size[0]
joint_U_a = create_ensemble_para(rng, 3,
joint_LR_input_size) # (input_size, 3)
joint_LR_b = theano.shared(value=np.zeros((3, ),
dtype=theano.config.floatX),
name='LR_b',
borrow=True) #bias for each target class
joint_LR_para = [joint_U_a, joint_LR_b]
joint_layer_LR = LogisticRegression(
rng,
input=joint_LR_input,
n_in=joint_LR_input_size,
n_out=3,
W=joint_U_a,
b=joint_LR_b
) #basically it is a multiplication between weight matrix and input feature vector
# joint_loss=joint_layer_LR.negative_log_likelihood(joint_labels) #for classification task, we usually used negative log likelihood as loss, the lower the better.
params = [init_embeddings] + NN_para + LR_para + joint_LR_para
print('initialze model parameters...')
load_model_from_file(
'/home1/w/wenpeng/dataset/FEVER/model_para_0.9936287838053803', params)
# train_model = theano.function([sents_ids,sents_mask,sents_labels,claim_ids,claim_mask,joint_sents_ids,joint_sents_mask,joint_sents_labels, joint_claim_ids, joint_claim_mask, joint_labels], cost, updates=updates, allow_input_downcast=True, on_unused_input='ignore')
test_model = theano.function(
[sents_ids, sents_mask, claim_ids, claim_mask],
[inter_matrix, binarize_prob, joint_layer_LR.y_pred],
allow_input_downcast=True,
on_unused_input='ignore')
# dev_model = theano.function([sents_ids,sents_mask, claim_ids,claim_mask], [binarize_prob,joint_layer_LR.y_pred], allow_input_downcast=True, on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print('... testing')
# early-stopping parameters
batch_score_vec, batch_binary_vec, pred_i = test_model(
test_sents, test_sent_masks, test_claims, test_claim_mask)
sorted_indices = np.argsort(batch_score_vec[0])[::-1] #descending order
selected_sents = []
for index in sorted_indices:
if batch_binary_vec[0][index] == 1:
selected_sents.append(sent_cand_list[index])
if len(selected_sents) == 5:
break
# for i, indicator in enumerate(list(batch_binary_vec[0])):
# if indicator == 1:
# selected_sents.append(sent_cand_list[i])
return pred_id2label.get(
pred_i[0]) + '"<p>"' + '"<br />"'.join(selected_sents) + '"<p/>"'
def evaluate_lenet5(learning_rate=0.1,
n_epochs=2000,
word_nkerns=300,
batch_size=1,
window_width=[3, 3],
emb_size=300,
margin=0.5,
L2_weight=0.0003,
Div_reg=0.03,
update_freq=1,
norm_threshold=5.0,
max_truncate=40,
max_relation_len=6,
max_Q_len=30,
neg_all=100,
train_size=69967,
test_size=19953,
mark='_RC_newdata'): #train_size=75909, test_size=17386
# maxSentLength=max_truncate+2*(window_width-1)
model_options = locals().copy()
print "model options", model_options
rootPath = '/home/wyin/Datasets/SimpleQuestions_v2/relation_classification/'
triple_files = [
'train.replace_ne.withpoolwenpengFormat.txt',
'test.replace_ne.withpoolwenpengFormat.txt'
]
rng = numpy.random.RandomState(23455)
datasets, datasets_test, length_per_example_train, length_per_example_test, vocab_size = load_train(
triple_files[0], triple_files[1], max_relation_len, max_Q_len,
train_size, test_size,
mark) #max_char_len, max_des_len, max_relation_len, max_Q_len
print 'vocab_size:', vocab_size
train_data = datasets
# valid_data=datasets[1]
test_data = datasets_test
# result=(pos_entity_char, pos_entity_des, relations, entity_char_lengths, entity_des_lengths, relation_lengths, mention_char_ids, remainQ_word_ids, mention_char_lens, remainQ_word_lens, entity_scores)
#
train_relations = train_data[0]
train_relation_lengths = train_data[1]
train_remainQ_word_ids = train_data[2]
train_remainQ_word_len = train_data[3]
test_relations = test_data[0]
test_relation_lengths = test_data[1]
test_remainQ_word_ids = test_data[2]
test_remainQ_word_len = test_data[3]
train_sizes = [
len(train_relations),
len(train_relation_lengths),
len(train_remainQ_word_ids),
len(train_remainQ_word_len)
]
if sum(train_sizes) / len(train_sizes) != train_size:
print 'weird size:', train_sizes
exit(0)
test_sizes = [
len(test_relations),
len(test_relation_lengths),
len(test_remainQ_word_ids),
len(test_remainQ_word_len)
]
if sum(test_sizes) / len(test_sizes) != test_size:
print 'weird size:', test_sizes
exit(0)
n_train_batches = train_size / batch_size
n_test_batches = test_size / batch_size
# indices_train_pos_entity_char=theano.shared(numpy.asarray(train_pos_entity_char, dtype='int32'), borrow=True)
# indices_train_pos_entity_des=theano.shared(numpy.asarray(train_pos_entity_des, dtype='int32'), borrow=True)
# indices_train_relations=theano.shared(numpy.asarray(train_relations, dtype='int32'), borrow=True)
# indices_train_entity_char_lengths=theano.shared(numpy.asarray(train_entity_char_lengths, dtype='int32'), borrow=True)
# indices_train_entity_des_lengths=theano.shared(numpy.asarray(train_entity_des_lengths, dtype='int32'), borrow=True)
# indices_train_relation_lengths=theano.shared(numpy.asarray(train_relation_lengths, dtype='int32'), borrow=True)
# indices_train_mention_char_ids=theano.shared(numpy.asarray(train_mention_char_ids, dtype='int32'), borrow=True)
# indices_train_remainQ_word_ids=theano.shared(numpy.asarray(train_remainQ_word_ids, dtype='int32'), borrow=True)
# indices_train_mention_char_lens=theano.shared(numpy.asarray(train_mention_char_lens, dtype='int32'), borrow=True)
# indices_train_remainQ_word_len=theano.shared(numpy.asarray(train_remainQ_word_len, dtype='int32'), borrow=True)
# indices_train_entity_scores=theano.shared(numpy.asarray(train_entity_scores, dtype=theano.config.floatX), borrow=True)
rand_values = random_value_normal((vocab_size + 1, emb_size),
theano.config.floatX,
numpy.random.RandomState(1234))
rand_values[0] = numpy.array(numpy.zeros(emb_size),
dtype=theano.config.floatX)
#rand_values[0]=numpy.array([1e-50]*emb_size)
# rand_values=load_word2vec_to_init(rand_values, rootPath+'word_emb'+mark+'.txt')
embeddings = theano.shared(value=rand_values, borrow=True)
# allocate symbolic variables for the data
index = T.iscalar()
rel_word_ids_M = T.imatrix()
rel_word_lens_M = T.imatrix()
q_word_ids_f = T.ivector()
q_word_lens_f = T.ivector()
filter_size = (emb_size, window_width[0])
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
word_filter_shape = (word_nkerns, 1, filter_size[0], filter_size[1])
q_rel_conv_W, q_rel_conv_b = create_conv_para(
rng, filter_shape=word_filter_shape)
params = [embeddings, q_rel_conv_W, q_rel_conv_b]
q_rel_conv_W_into_matrix = q_rel_conv_W.reshape(
(q_rel_conv_W.shape[0], q_rel_conv_W.shape[2] * q_rel_conv_W.shape[3]))
# load_model_from_file(rootPath, params, '')
def SimpleQ_matches_Triple(rel_word_ids_f, rel_word_lens_f):
rel_word_input = embeddings[rel_word_ids_f.flatten()].reshape(
(batch_size, max_relation_len,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
q_word_input = embeddings[q_word_ids_f.flatten()].reshape(
(batch_size, max_Q_len,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
#q-rel
q_rel_conv = Conv_with_input_para(rng,
input=q_word_input,
image_shape=(batch_size, 1, emb_size,
max_Q_len),
filter_shape=word_filter_shape,
W=q_rel_conv_W,
b=q_rel_conv_b)
rel_conv = Conv_with_input_para(rng,
input=rel_word_input,
image_shape=(batch_size, 1, emb_size,
max_relation_len),
filter_shape=word_filter_shape,
W=q_rel_conv_W,
b=q_rel_conv_b)
# q_rel_pool=Max_Pooling(rng, input_l=q_rel_conv.output, left_l=q_word_lens_f[0], right_l=q_word_lens_f[2])
rel_conv_pool = Max_Pooling(rng,
input_l=rel_conv.output,
left_l=rel_word_lens_f[0],
right_l=rel_word_lens_f[2])
q_rel_pool = Average_Pooling_for_SimpleQA(
rng,
input_l=q_rel_conv.output,
input_r=rel_conv_pool.output_maxpooling,
left_l=q_word_lens_f[0],
right_l=q_word_lens_f[2],
length_l=q_word_lens_f[1] + filter_size[1] - 1,
dim=max_Q_len + filter_size[1] - 1,
topk=2)
overall_simi = cosine(q_rel_pool.output_maxpooling,
rel_conv_pool.output_maxpooling)
return overall_simi
simi_list, updates = theano.scan(
SimpleQ_matches_Triple, sequences=[rel_word_ids_M, rel_word_lens_M])
posi_simi = simi_list[0]
nega_simies = simi_list[1:]
loss_simi_list = T.maximum(
0.0, margin - posi_simi.reshape((1, 1)) + nega_simies)
loss_simi = T.sum(loss_simi_list)
#L2_reg =(layer3.W** 2).sum()+(layer2.W** 2).sum()+(layer1.W** 2).sum()+(conv_W** 2).sum()
L2_reg = debug_print(
(embeddings**2).sum() + (q_rel_conv_W**2).sum(),
'L2_reg') #+(layer1.W** 2).sum()++(embeddings**2).sum()
diversify_reg = Diversify_Reg(q_rel_conv_W_into_matrix)
cost = loss_simi + L2_weight * L2_reg + Div_reg * diversify_reg
#cost=debug_print((cost_this+cost_tmp)/update_freq, 'cost')
test_model = theano.function(
[rel_word_ids_M, rel_word_lens_M, q_word_ids_f, q_word_lens_f],
[loss_simi, simi_list],
on_unused_input='ignore')
accumulator = []
for para_i in params:
eps_p = numpy.zeros_like(para_i.get_value(borrow=True),
dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
grad_i = debug_print(grad_i, 'grad_i')
acc = acc_i + T.sqr(grad_i)
# updates.append((param_i, param_i - learning_rate * grad_i / T.sqrt(acc+1e-10))) #AdaGrad
# updates.append((acc_i, acc))
if param_i == embeddings:
updates.append(
(param_i,
T.set_subtensor(
(param_i -
learning_rate * grad_i / T.sqrt(acc + 1e-10))[0],
theano.shared(numpy.zeros(emb_size))))) #Ada
else:
updates.append(
(param_i, param_i -
learning_rate * grad_i / T.sqrt(acc + 1e-10))) #AdaGrad
updates.append((acc_i, acc))
train_model = theano.function(
[rel_word_ids_M, rel_word_lens_M, q_word_ids_f, q_word_lens_f],
[loss_simi, cost],
updates=updates,
on_unused_input='ignore')
# train_model = theano.function([index, chosed_indices], [loss_simi, cost], updates=updates,
# givens={
# rel_word_ids_M : indices_train_relations[index].reshape((neg_all, max_relation_len))[chosed_indices].reshape((train_neg_size, max_relation_len)),
# rel_word_lens_M : indices_train_relation_lengths[index].reshape((neg_all, 3))[chosed_indices].reshape((train_neg_size, 3)),
# q_word_ids_M : indices_train_remainQ_word_ids[index].reshape((neg_all, max_Q_len))[chosed_indices].reshape((train_neg_size, max_Q_len)),
# q_word_lens_M : indices_train_remainQ_word_len[index].reshape((neg_all, 3))[chosed_indices].reshape((train_neg_size, 3))
#
# }, on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
patience_increase = 2 # wait this much longer when a new best is
# found
improvement_threshold = 0.995 # a relative improvement of this much is
# considered significant
validation_frequency = min(n_train_batches, patience / 2)
# go through this many
# minibatche before checking the network
# on the validation set; in this case we
# check every epoch
best_params = None
best_validation_loss = numpy.inf
best_iter = 0
test_score = 0.
start_time = time.clock()
mid_time = start_time
epoch = 0
done_looping = False
best_test_accu = 0.0
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
#for minibatch_index in xrange(n_train_batches): # each batch
minibatch_index = 0
for jj in range(train_size):
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * n_train_batches + minibatch_index + 1
minibatch_index = minibatch_index + 1
#print batch_start
train_rel_word_ids_M = numpy.asarray(
train_relations[jj], dtype='int32').reshape(
(length_per_example_train[jj], max_relation_len))
train_rel_word_lens_M = numpy.asarray(
train_relation_lengths[jj], dtype='int32').reshape(
(length_per_example_train[jj], 3))
train_q_word_ids_M = numpy.asarray(
train_remainQ_word_ids[jj], dtype='int32'
) #.reshape((length_per_example_train[jj], max_Q_len))
train_q_word_lens_M = numpy.asarray(
train_remainQ_word_len[jj],
dtype='int32') #.reshape((length_per_example_train[jj], 3))
loss_simi_i, cost_i = train_model(train_rel_word_ids_M,
train_rel_word_lens_M,
train_q_word_ids_M,
train_q_word_lens_M)
if iter % n_train_batches == 0:
print 'training @ iter = ' + str(
iter) + '\tloss_simi_i: ', loss_simi_i, 'cost_i:', cost_i
#if iter ==1:
# exit(0)
#
if iter > 59999 and iter % 10000 == 0:
test_loss = []
succ = 0
for i in range(test_size):
# print 'testing', i, '...'
#prepare data
test_rel_word_ids_M = numpy.asarray(
test_relations[i], dtype='int32').reshape(
(length_per_example_test[i], max_relation_len))
test_rel_word_lens_M = numpy.asarray(
test_relation_lengths[i], dtype='int32').reshape(
(length_per_example_test[i], 3))
test_q_word_ids_M = numpy.asarray(
test_remainQ_word_ids[i], dtype='int32'
) #.reshape((length_per_example_test[i], max_Q_len))
test_q_word_lens_M = numpy.asarray(
test_remainQ_word_len[i], dtype='int32'
) #.reshape((length_per_example_test[i], 3))
loss_simi_i, simi_list_i = test_model(
test_rel_word_ids_M, test_rel_word_lens_M,
test_q_word_ids_M, test_q_word_lens_M)
# print 'simi_list_i:', simi_list_i[:10]
test_loss.append(loss_simi_i)
if simi_list_i[0] >= max(simi_list_i[1:]):
succ += 1
# print 'testing', i, '...acc:', succ*1.0/(i+1)
succ = (succ + 20610 - test_size) * 1.0 / 20610
#now, check MAP and MRR
print((
'\t\t\t\t\t\tepoch %i, minibatch %i/%i, test accu of best '
'model %f') %
(epoch, minibatch_index, n_train_batches, succ))
if best_test_accu < succ:
best_test_accu = succ
store_model_to_file(rootPath, params, mark)
if patience <= iter:
done_looping = True
break
print 'Epoch ', epoch, 'uses ', (time.clock() - mid_time) / 60.0, 'min'
mid_time = time.clock()
#print 'Batch_size: ', update_freq
end_time = time.clock()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' + os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(learning_rate=0.1, n_epochs=2000, word_nkerns=500, char_nkerns=100, batch_size=1, window_width=3,
emb_size=500, char_emb_size=100, hidden_size=200,
margin=0.5, L2_weight=0.0003, update_freq=1, norm_threshold=5.0, max_truncate=40,
max_char_len=40, max_des_len=20, max_relation_len=5, max_Q_len=30, train_neg_size=6,
neg_all=100, train_size=75893, test_size=19168, mark='_BiasedMaxPool_lr0.1_word500_char100_noDes_ent2.0'): #train_size=75909, test_size=17386
# maxSentLength=max_truncate+2*(window_width-1)
model_options = locals().copy()
print "model options", model_options
rootPath='/mounts/data/proj/wenpeng/Dataset/freebase/SimpleQuestions_v2/'
triple_files=['annotated_fb_data_train.entitylinking.top20_succSet_asInput.txt', 'annotated_fb_data_test.entitylinking.top20_succSet_asInput.fromMo_FB5M.txt']
rng = numpy.random.RandomState(23455)
word2id, char2id=load_word2id_char2id(mark)
# datasets, datasets_test, length_per_example_test, vocab_size, char_size=load_test_or_valid(triple_files[0], triple_files[1], max_char_len, max_des_len, max_relation_len, max_Q_len, train_size, test_size)#max_char_len, max_des_len, max_relation_len, max_Q_len
datasets_test, length_per_example_test, word2id, char2id = load_test_or_valid(triple_files[1], char2id, word2id, max_char_len, max_des_len, max_relation_len, max_Q_len, test_size)
vocab_size=len(word2id)
char_size=len(char2id)
print 'vocab_size:', vocab_size, 'char_size:', char_size
# train_data=datasets
# valid_data=datasets[1]
test_data=datasets_test
# result=(pos_entity_char, pos_entity_des, relations, entity_char_lengths, entity_des_lengths, relation_lengths, mention_char_ids, remainQ_word_ids, mention_char_lens, remainQ_word_lens, entity_scores)
#
# train_pos_entity_char=train_data[0]
# train_pos_entity_des=train_data[1]
# train_relations=train_data[2]
# train_entity_char_lengths=train_data[3]
# train_entity_des_lengths=train_data[4]
# train_relation_lengths=train_data[5]
# train_mention_char_ids=train_data[6]
# train_remainQ_word_ids=train_data[7]
# train_mention_char_lens=train_data[8]
# train_remainQ_word_len=train_data[9]
# train_entity_scores=train_data[10]
test_pos_entity_char=test_data[0]
# test_pos_entity_des=test_data[1]
test_relations=test_data[2]
test_entity_char_lengths=test_data[3]
# test_entity_des_lengths=test_data[4]
test_relation_lengths=test_data[5]
test_mention_char_ids=test_data[6]
test_remainQ_word_ids=test_data[7]
test_mention_char_lens=test_data[8]
test_remainQ_word_len=test_data[9]
test_entity_scores=test_data[10]
#
# test_pos_entity_char=test_data[0] #matrix, each row for line example, all head and tail entity, iteratively: 40*2*51
# test_pos_entity_des=test_data[1] #matrix, each row for a examle: 20*2*51
# test_relations=test_data[2] #matrix, each row for a example: 5*51
# test_entity_char_lengths=test_data[3] #matrix, each row for a example: 3*2*51 (three valies for one entity)
# test_entity_des_lengths=test_data[4] #matrix, each row for a example: 3*2*51 (three values for one entity)
# test_relation_lengths=test_data[5] #matrix, each row for a example: 3*51
# test_mention_char_ids=test_data[6] #matrix, each row for a mention: 40
# test_remainQ_word_ids=test_data[7] #matrix, each row for a question: 30
# test_mention_char_lens=test_data[8] #matrix, each three values for a mention: 3
# test_remainQ_word_len=test_data[9] #matrix, each three values for a remain question: 3
# train_sizes=[len(train_pos_entity_char), len(train_pos_entity_des), len(train_relations), len(train_entity_char_lengths), len(train_entity_des_lengths),\
# len(train_relation_lengths), len(train_mention_char_ids), len(train_remainQ_word_ids), len(train_mention_char_lens), len(train_remainQ_word_len), len(train_entity_scores)]
# if sum(train_sizes)/len(train_sizes)!=train_size:
# print 'weird size:', train_sizes
# exit(0)
test_sizes=[len(test_pos_entity_char), len(test_relations), len(test_entity_char_lengths),\
len(test_relation_lengths), len(test_mention_char_ids), len(test_remainQ_word_ids), len(test_mention_char_lens), len(test_remainQ_word_len), len(test_entity_scores)]
if sum(test_sizes)/len(test_sizes)!=test_size:
print 'weird size:', test_sizes
exit(0)
# n_train_batches=train_size/batch_size
# n_test_batches=test_size/batch_size
# train_batch_start=list(numpy.arange(n_train_batches)*batch_size)
# test_batch_start=list(numpy.arange(n_test_batches)*batch_size)
# indices_train_pos_entity_char=pythonList_into_theanoIntMatrix(train_pos_entity_char)
# indices_train_pos_entity_des=pythonList_into_theanoIntMatrix(train_pos_entity_des)
# indices_train_relations=pythonList_into_theanoIntMatrix(train_relations)
# indices_train_entity_char_lengths=pythonList_into_theanoIntMatrix(train_entity_char_lengths)
# indices_train_entity_des_lengths=pythonList_into_theanoIntMatrix(train_entity_des_lengths)
# indices_train_relation_lengths=pythonList_into_theanoIntMatrix(train_relation_lengths)
# indices_train_mention_char_ids=pythonList_into_theanoIntMatrix(train_mention_char_ids)
# indices_train_remainQ_word_ids=pythonList_into_theanoIntMatrix(train_remainQ_word_ids)
# indices_train_mention_char_lens=pythonList_into_theanoIntMatrix(train_mention_char_lens)
# indices_train_remainQ_word_len=pythonList_into_theanoIntMatrix(train_remainQ_word_len)
# indices_train_entity_scores=pythonList_into_theanoFloatMatrix(train_entity_scores)
# indices_test_pos_entity_char=pythonList_into_theanoIntMatrix(test_pos_entity_char)
# indices_test_pos_entity_des=pythonList_into_theanoIntMatrix(test_pos_entity_des)
# indices_test_relations=pythonList_into_theanoIntMatrix(test_relations)
# indices_test_entity_char_lengths=pythonList_into_theanoIntMatrix(test_entity_char_lengths)
# indices_test_entity_des_lengths=pythonList_into_theanoIntMatrix(test_entity_des_lengths)
# indices_test_relation_lengths=pythonList_into_theanoIntMatrix(test_relation_lengths)
# indices_test_mention_char_ids=pythonList_into_theanoIntMatrix(test_mention_char_ids)
# indices_test_remainQ_word_ids=pythonList_into_theanoIntMatrix(test_remainQ_word_ids)
# indices_test_mention_char_lens=pythonList_into_theanoIntMatrix(test_mention_char_lens)
# indices_test_remainQ_word_len=pythonList_into_theanoIntMatrix(test_remainQ_word_len)
# indices_test_entity_scores=pythonList_into_theanoIntMatrix(test_entity_scores)
rand_values=random_value_normal((vocab_size+1, emb_size), theano.config.floatX, numpy.random.RandomState(1234))
# rand_values[0]=numpy.array(numpy.zeros(emb_size),dtype=theano.config.floatX)
#rand_values[0]=numpy.array([1e-50]*emb_size)
# rand_values=load_word2vec_to_init(rand_values, rootPath+'word_emb.txt')
embeddings=theano.shared(value=rand_values, borrow=True)
char_rand_values=random_value_normal((char_size+1, char_emb_size), theano.config.floatX, numpy.random.RandomState(1234))
# char_rand_values[0]=numpy.array(numpy.zeros(char_emb_size),dtype=theano.config.floatX)
char_embeddings=theano.shared(value=char_rand_values, borrow=True)
# allocate symbolic variables for the data
index = T.iscalar()
chosed_indices=T.ivector()
ent_char_ids_M = T.imatrix()
ent_lens_M = T.imatrix()
men_char_ids_M = T.imatrix()
men_lens_M=T.imatrix()
rel_word_ids_M=T.imatrix()
rel_word_lens_M=T.imatrix()
#desH_word_ids_M=T.imatrix()
#desH_word_lens_M=T.imatrix()
q_word_ids_M=T.imatrix()
q_word_lens_M=T.imatrix()
ent_scores=T.fvector()
filter_size=(emb_size,window_width)
char_filter_size=(char_emb_size, window_width)
#poolsize1=(1, ishape[1]-filter_size[1]+1) #?????????????????????????????
# length_after_wideConv=ishape[1]+filter_size[1]-1
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
char_filter_shape=(char_nkerns, 1, char_filter_size[0], char_filter_size[1])
word_filter_shape=(word_nkerns, 1, filter_size[0], filter_size[1])
char_conv_W, char_conv_b=create_conv_para(rng, filter_shape=char_filter_shape)
q_rel_conv_W, q_rel_conv_b=create_conv_para(rng, filter_shape=word_filter_shape)
#q_desH_conv_W, q_desH_conv_b=create_conv_para(rng, filter_shape=word_filter_shape)
params = [char_embeddings, embeddings, char_conv_W, char_conv_b, q_rel_conv_W, q_rel_conv_b]#, q_desH_conv_W, q_desH_conv_b]
load_model_from_file(rootPath, params, mark)
def SimpleQ_matches_Triple(ent_char_ids_f,ent_lens_f,rel_word_ids_f,rel_word_lens_f,
men_char_ids_f, q_word_ids_f, men_lens_f, q_word_lens_f):
# rng = numpy.random.RandomState(23455)
ent_char_input = char_embeddings[ent_char_ids_f.flatten()].reshape((batch_size,max_char_len, char_emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
men_char_input = char_embeddings[men_char_ids_f.flatten()].reshape((batch_size,max_char_len, char_emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
rel_word_input = embeddings[rel_word_ids_f.flatten()].reshape((batch_size,max_relation_len, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
#desH_word_input = embeddings[desH_word_ids_f.flatten()].reshape((batch_size,max_des_len, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
# desT_word_input = embeddings[desT_word_ids_f.flatten()].reshape((batch_size,max_des_len, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
q_word_input = embeddings[q_word_ids_f.flatten()].reshape((batch_size,max_Q_len, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
#ent_mention
ent_char_conv = Conv_with_input_para(rng, input=ent_char_input,
image_shape=(batch_size, 1, char_emb_size, max_char_len),
filter_shape=char_filter_shape, W=char_conv_W, b=char_conv_b)
men_char_conv = Conv_with_input_para(rng, input=men_char_input,
image_shape=(batch_size, 1, char_emb_size, max_char_len),
filter_shape=char_filter_shape, W=char_conv_W, b=char_conv_b)
#q-rel
q_rel_conv = Conv_with_input_para(rng, input=q_word_input,
image_shape=(batch_size, 1, emb_size, max_Q_len),
filter_shape=word_filter_shape, W=q_rel_conv_W, b=q_rel_conv_b)
rel_conv = Conv_with_input_para(rng, input=rel_word_input,
image_shape=(batch_size, 1, emb_size, max_relation_len),
filter_shape=word_filter_shape, W=q_rel_conv_W, b=q_rel_conv_b)
#q_desH
#q_desH_conv = Conv_with_input_para(rng, input=q_word_input,
# image_shape=(batch_size, 1, emb_size, max_Q_len),
# filter_shape=word_filter_shape, W=q_desH_conv_W, b=q_desH_conv_b)
#desH_conv = Conv_with_input_para(rng, input=desH_word_input,
# image_shape=(batch_size, 1, emb_size, max_des_len),
# filter_shape=word_filter_shape, W=q_desH_conv_W, b=q_desH_conv_b)
ent_conv_pool=Max_Pooling(rng, input_l=ent_char_conv.output, left_l=ent_lens_f[0], right_l=ent_lens_f[2])
men_conv_pool=Max_Pooling(rng, input_l=men_char_conv.output, left_l=men_lens_f[0], right_l=men_lens_f[2])
#q_rel_pool=Max_Pooling(rng, input_l=q_rel_conv.output, left_l=q_word_lens_f[0], right_l=q_word_lens_f[2])
rel_conv_pool=Max_Pooling(rng, input_l=rel_conv.output, left_l=rel_word_lens_f[0], right_l=rel_word_lens_f[2])
q_rel_pool=Average_Pooling_for_SimpleQA(rng, input_l=q_rel_conv.output, input_r=rel_conv_pool.output_maxpooling,
left_l=q_word_lens_f[0], right_l=q_word_lens_f[2], length_l=q_word_lens_f[1]+filter_size[1]-1,
dim=max_Q_len+filter_size[1]-1, topk=2)
#q_desH_pool=Max_Pooling(rng, input_l=q_desH_conv.output, left_l=q_word_lens_f[0], right_l=q_word_lens_f[2])
#desH_conv_pool=Max_Pooling(rng, input_l=desH_conv.output, left_l=desH_word_lens_f[0], right_l=desH_word_lens_f[2])
overall_simi=cosine(ent_conv_pool.output_maxpooling, men_conv_pool.output_maxpooling)*0.33333+\
cosine(q_rel_pool.output_maxpooling, rel_conv_pool.output_maxpooling)*0.55
# 0.0*cosine(q_desH_pool.output_maxpooling, desH_conv_pool.output_maxpooling)
# cosine(q_desT_pool.output_maxpooling, desT_conv_pool.output_maxpooling)
return overall_simi
simi_list, updates = theano.scan(
SimpleQ_matches_Triple,
sequences=[ent_char_ids_M,ent_lens_M,rel_word_ids_M,rel_word_lens_M,
men_char_ids_M, q_word_ids_M, men_lens_M, q_word_lens_M])
simi_list+=0.2*ent_scores
posi_simi=simi_list[0]
nega_simies=simi_list[1:]
loss_simi_list=T.maximum(0.0, margin-posi_simi.reshape((1,1))+nega_simies)
loss_simi=T.sum(loss_simi_list)
test_model = theano.function([ent_char_ids_M, ent_lens_M, men_char_ids_M, men_lens_M, rel_word_ids_M, rel_word_lens_M,
q_word_ids_M, q_word_lens_M, ent_scores], [loss_simi, simi_list],on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... testing'
start_time = time.clock()
mid_time = start_time
epoch = 0
test_loss=[]
succ=0
for i in range(test_size):
#prepare data
test_ent_char_ids_M= numpy.asarray(test_pos_entity_char[i], dtype='int32').reshape((length_per_example_test[i], max_char_len))
test_ent_lens_M = numpy.asarray(test_entity_char_lengths[i], dtype='int32').reshape((length_per_example_test[i], 3))
test_men_char_ids_M = numpy.asarray(test_mention_char_ids[i], dtype='int32').reshape((length_per_example_test[i], max_char_len))
test_men_lens_M = numpy.asarray(test_mention_char_lens[i], dtype='int32').reshape((length_per_example_test[i], 3))
test_rel_word_ids_M = numpy.asarray(test_relations[i], dtype='int32').reshape((length_per_example_test[i], max_relation_len))
test_rel_word_lens_M = numpy.asarray(test_relation_lengths[i], dtype='int32').reshape((length_per_example_test[i], 3))
#test_desH_word_ids_M =numpy.asarray( test_pos_entity_des[i], dtype='int32').reshape((length_per_example_test[i], max_des_len))
#test_desH_word_lens_M = numpy.asarray(test_entity_des_lengths[i], dtype='int32').reshape((length_per_example_test[i], 3))
test_q_word_ids_M = numpy.asarray(test_remainQ_word_ids[i], dtype='int32').reshape((length_per_example_test[i], max_Q_len))
test_q_word_lens_M = numpy.asarray(test_remainQ_word_len[i], dtype='int32').reshape((length_per_example_test[i], 3))
test_ent_scores = numpy.asarray(test_entity_scores[i], dtype=theano.config.floatX)
loss_simi_i,simi_list_i=test_model(test_ent_char_ids_M, test_ent_lens_M, test_men_char_ids_M, test_men_lens_M, test_rel_word_ids_M, test_rel_word_lens_M,
test_q_word_ids_M, test_q_word_lens_M, test_ent_scores)
# print 'simi_list_i:', simi_list_i[:10]
test_loss.append(loss_simi_i)
if len(simi_list_i)==1 or simi_list_i[0]>=max(simi_list_i[1:]):
succ+=1
if i%1000==0:
print 'testing', i, '...acc:', (succ*1.0/(i+1))*(19168*1.0/21687)
succ=succ*100.0/21687
#now, check MAP and MRR
print 'accu:', succ
# store_model_to_file(rootPath, params, succ, mark)
print 'Epoch ', epoch, 'uses ', (time.clock()-mid_time)/60.0, 'min'
def evaluate_lenet5(learning_rate=0.085, n_epochs=2000, nkerns=[50, 50], batch_size=1, window_width=7,
maxSentLength=60, emb_size=300, hidden_size=200,
margin=0.5, L2_weight=0.00005, update_freq=10, norm_threshold=5.0):
model_options = locals().copy()
print "model options", model_options
rootPath='/mounts/data/proj/wenpeng/Dataset/MicrosoftParaphrase/tokenized_msr/';
rng = numpy.random.RandomState(23455)
datasets, vocab_size=load_msr_corpus(rootPath+'vocab.txt', rootPath+'tokenized_train.txt', rootPath+'tokenized_test.txt', maxSentLength)
mtPath='/mounts/data/proj/wenpeng/Dataset/paraphraseMT/'
mt_train, mt_test=load_mts(mtPath+'concate_15mt_train.txt', mtPath+'concate_15mt_test.txt')
indices_train, trainY, trainLengths, normalized_train_length, trainLeftPad, trainRightPad= datasets[0]
indices_train_l=indices_train[::2,:]
indices_train_r=indices_train[1::2,:]
trainLengths_l=trainLengths[::2]
trainLengths_r=trainLengths[1::2]
normalized_train_length_l=normalized_train_length[::2]
normalized_train_length_r=normalized_train_length[1::2]
trainLeftPad_l=trainLeftPad[::2]
trainLeftPad_r=trainLeftPad[1::2]
trainRightPad_l=trainRightPad[::2]
trainRightPad_r=trainRightPad[1::2]
indices_test, testY, testLengths,normalized_test_length, testLeftPad, testRightPad= datasets[1]
indices_test_l=indices_test[::2,:]
indices_test_r=indices_test[1::2,:]
testLengths_l=testLengths[::2]
testLengths_r=testLengths[1::2]
normalized_test_length_l=normalized_test_length[::2]
normalized_test_length_r=normalized_test_length[1::2]
testLeftPad_l=testLeftPad[::2]
testLeftPad_r=testLeftPad[1::2]
testRightPad_l=testRightPad[::2]
testRightPad_r=testRightPad[1::2]
n_train_batches=indices_train_l.shape[0]/batch_size
n_test_batches=indices_test_l.shape[0]/batch_size
train_batch_start=list(numpy.arange(n_train_batches)*batch_size)
test_batch_start=list(numpy.arange(n_test_batches)*batch_size)
indices_train_l=theano.shared(numpy.asarray(indices_train_l, dtype=theano.config.floatX), borrow=True)
indices_train_r=theano.shared(numpy.asarray(indices_train_r, dtype=theano.config.floatX), borrow=True)
indices_test_l=theano.shared(numpy.asarray(indices_test_l, dtype=theano.config.floatX), borrow=True)
indices_test_r=theano.shared(numpy.asarray(indices_test_r, dtype=theano.config.floatX), borrow=True)
indices_train_l=T.cast(indices_train_l, 'int32')
indices_train_r=T.cast(indices_train_r, 'int32')
indices_test_l=T.cast(indices_test_l, 'int32')
indices_test_r=T.cast(indices_test_r, 'int32')
rand_values=random_value_normal((vocab_size+1, emb_size), theano.config.floatX, numpy.random.RandomState(1234))
rand_values[0]=numpy.array(numpy.zeros(emb_size))
#rand_values[0]=numpy.array([1e-50]*emb_size)
rand_values=load_word2vec_to_init(rand_values, rootPath+'vocab_embs_300d.txt')
embeddings=theano.shared(value=rand_values, borrow=True)
cost_tmp=0
error_sum=0
# allocate symbolic variables for the data
index = T.lscalar()
x_index_l = T.imatrix('x_index_l') # now, x is the index matrix, must be integer
x_index_r = T.imatrix('x_index_r')
y = T.ivector('y')
left_l=T.iscalar()
right_l=T.iscalar()
left_r=T.iscalar()
right_r=T.iscalar()
length_l=T.iscalar()
length_r=T.iscalar()
norm_length_l=T.dscalar()
norm_length_r=T.dscalar()
mts=T.dmatrix()
#x=embeddings[x_index.flatten()].reshape(((batch_size*4),maxSentLength, emb_size)).transpose(0, 2, 1).flatten()
ishape = (emb_size, maxSentLength) # this is the size of MNIST images
filter_size=(emb_size,window_width)
#poolsize1=(1, ishape[1]-filter_size[1]+1) #?????????????????????????????
length_after_wideConv=ishape[1]+filter_size[1]-1
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
# Reshape matrix of rasterized images of shape (batch_size,28*28)
# to a 4D tensor, compatible with our LeNetConvPoolLayer
#layer0_input = x.reshape(((batch_size*4), 1, ishape[0], ishape[1]))
layer0_l_input = embeddings[x_index_l.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_r_input = embeddings[x_index_r.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
conv_W, conv_b=create_conv_para(rng, filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]))
#layer0_output = debug_print(layer0.output, 'layer0.output')
layer0_l = Conv_with_input_para(rng, input=layer0_l_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]), W=conv_W, b=conv_b)
layer0_r = Conv_with_input_para(rng, input=layer0_r_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]), W=conv_W, b=conv_b)
layer0_l_output=debug_print(layer0_l.output, 'layer0_l.output')
layer0_r_output=debug_print(layer0_r.output, 'layer0_r.output')
layer0_para=[conv_W, conv_b]
layer1=Average_Pooling(rng, input_l=layer0_l_output, input_r=layer0_r_output, kern=nkerns[0],
left_l=left_l, right_l=right_l, left_r=left_r, right_r=right_r,
length_l=length_l+filter_size[1]-1, length_r=length_r+filter_size[1]-1,
dim=maxSentLength+filter_size[1]-1, window_size=window_width, maxSentLength=maxSentLength)
conv2_W, conv2_b=create_conv_para(rng, filter_shape=(nkerns[1], 1, nkerns[0], filter_size[1]))
layer2_l = Conv_with_input_para(rng, input=layer1.output_tensor_l,
image_shape=(batch_size, 1, nkerns[0], ishape[1]),
filter_shape=(nkerns[1], 1, nkerns[0], filter_size[1]), W=conv2_W, b=conv2_b)
layer2_r = Conv_with_input_para(rng, input=layer1.output_tensor_r,
image_shape=(batch_size, 1, nkerns[0], ishape[1]),
filter_shape=(nkerns[1], 1, nkerns[0], filter_size[1]), W=conv2_W, b=conv2_b)
layer2_para=[conv2_W, conv2_b]
layer3=Average_Pooling_for_batch1(rng, input_l=layer2_l.output, input_r=layer2_r.output, kern=nkerns[1],
left_l=left_l, right_l=right_l, left_r=left_r, right_r=right_r,
length_l=length_l+filter_size[1]-1, length_r=length_r+filter_size[1]-1,
dim=maxSentLength+filter_size[1]-1)
layer3_out=debug_print(layer3.output_simi, 'layer1_out')
#layer2=HiddenLayer(rng, input=layer1_out, n_in=nkerns[0]*2, n_out=hidden_size, activation=T.tanh)
sum_uni_l=T.sum(layer0_l_input, axis=3).reshape((1, emb_size))
#norm_uni_l=sum_uni_l/T.sqrt((sum_uni_l**2).sum())
sum_uni_r=T.sum(layer0_r_input, axis=3).reshape((1, emb_size))
#norm_uni_r=sum_uni_r/T.sqrt((sum_uni_r**2).sum())
'''
uni_cosine=cosine(sum_uni_l, sum_uni_r)
linear=Linear(sum_uni_l, sum_uni_r)
poly=Poly(sum_uni_l, sum_uni_r)
sigmoid=Sigmoid(sum_uni_l, sum_uni_r)
rbf=RBF(sum_uni_l, sum_uni_r)
gesd=GESD(sum_uni_l, sum_uni_r)
'''
eucli_1=1.0/(1.0+EUCLID(sum_uni_l, sum_uni_r))#25.2%
#eucli_1=EUCLID(sum_uni_l, sum_uni_r)
len_l=norm_length_l.reshape((1,1))
len_r=norm_length_r.reshape((1,1))
#length_gap=T.log(1+(T.sqrt((len_l-len_r)**2))).reshape((1,1))
#length_gap=T.sqrt((len_l-len_r)**2)
#layer3_input=mts
layer4_input=T.concatenate([mts, eucli_1,layer1.output_eucli, layer3_out,len_l, len_r], axis=1)#, layer2.output, layer1.output_cosine], axis=1)
#layer3_input=T.concatenate([mts,eucli, uni_cosine, len_l, len_r, norm_uni_l-(norm_uni_l+norm_uni_r)/2], axis=1)
#layer3=LogisticRegression(rng, input=layer3_input, n_in=11, n_out=2)
layer4=LogisticRegression(rng, input=layer4_input, n_in=15+3+2, n_out=2)
#L2_reg =(layer3.W** 2).sum()+(layer2.W** 2).sum()+(layer1.W** 2).sum()+(conv_W** 2).sum()
L2_reg =debug_print((layer4.W** 2).sum()+(conv2_W** 2).sum()+(conv_W** 2).sum(), 'L2_reg')#+(layer1.W** 2).sum()
cost_this =debug_print(layer4.negative_log_likelihood(y), 'cost_this')#+L2_weight*L2_reg
cost=debug_print((cost_this+cost_tmp)/update_freq+L2_weight*L2_reg, 'cost')
test_model = theano.function([index], [layer4.errors(y), layer4.y_pred],
givens={
x_index_l: indices_test_l[index: index + batch_size],
x_index_r: indices_test_r[index: index + batch_size],
y: testY[index: index + batch_size],
left_l: testLeftPad_l[index],
right_l: testRightPad_l[index],
left_r: testLeftPad_r[index],
right_r: testRightPad_r[index],
length_l: testLengths_l[index],
length_r: testLengths_r[index],
norm_length_l: normalized_test_length_l[index],
norm_length_r: normalized_test_length_r[index],
mts: mt_test[index: index + batch_size]}, on_unused_input='ignore')
#params = layer3.params + layer2.params + layer1.params+ [conv_W, conv_b]
params = layer4.params+ layer2_para+ layer0_para# + layer1.params
accumulator=[]
for para_i in params:
eps_p=numpy.zeros_like(para_i.get_value(borrow=True),dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
grad_i=debug_print(grad_i,'grad_i')
#norm=T.sqrt((grad_i**2).sum())
#if T.lt(norm_threshold, norm):
# print 'big norm'
# grad_i=grad_i*(norm_threshold/norm)
acc = acc_i + T.sqr(grad_i)
updates.append((param_i, param_i - learning_rate * grad_i / T.sqrt(acc))) #AdaGrad
updates.append((acc_i, acc))
train_model = theano.function([index], [cost,layer4.errors(y), layer4_input], updates=updates,
givens={
x_index_l: indices_train_l[index: index + batch_size],
x_index_r: indices_train_r[index: index + batch_size],
y: trainY[index: index + batch_size],
left_l: trainLeftPad_l[index],
right_l: trainRightPad_l[index],
left_r: trainLeftPad_r[index],
right_r: trainRightPad_r[index],
length_l: trainLengths_l[index],
length_r: trainLengths_r[index],
norm_length_l: normalized_train_length_l[index],
norm_length_r: normalized_train_length_r[index],
mts: mt_train[index: index + batch_size]}, on_unused_input='ignore')
train_model_predict = theano.function([index], [cost_this,layer4.errors(y)],
givens={
x_index_l: indices_train_l[index: index + batch_size],
x_index_r: indices_train_r[index: index + batch_size],
y: trainY[index: index + batch_size],
left_l: trainLeftPad_l[index],
right_l: trainRightPad_l[index],
left_r: trainLeftPad_r[index],
right_r: trainRightPad_r[index],
length_l: trainLengths_l[index],
length_r: trainLengths_r[index],
norm_length_l: normalized_train_length_l[index],
norm_length_r: normalized_train_length_r[index],
mts: mt_train[index: index + batch_size]}, on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
patience_increase = 2 # wait this much longer when a new best is
# found
improvement_threshold = 0.995 # a relative improvement of this much is
# considered significant
validation_frequency = min(n_train_batches, patience / 2)
# go through this many
# minibatche before checking the network
# on the validation set; in this case we
# check every epoch
best_params = None
best_validation_loss = numpy.inf
best_iter = 0
test_score = 0.
start_time = time.clock()
epoch = 0
done_looping = False
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
#for minibatch_index in xrange(n_train_batches): # each batch
minibatch_index=0
#shuffle(train_batch_start)#shuffle training data
for batch_start in train_batch_start:
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * n_train_batches + minibatch_index +1
minibatch_index=minibatch_index+1
#if epoch %2 ==0:
# batch_start=batch_start+remain_train
#time.sleep(0.5)
if iter%update_freq != 0:
cost_ij, error_ij=train_model_predict(batch_start)
#print 'cost_ij: ', cost_ij
cost_tmp+=cost_ij
error_sum+=error_ij
else:
cost_average, error_ij, layer3_input= train_model(batch_start)
#print 'training @ iter = '+str(iter)+' average cost: '+str(cost_average)+' sum error: '+str(error_sum)+'/'+str(update_freq)
error_sum=0
cost_tmp=0#reset for the next batch
#print layer3_input
#exit(0)
#exit(0)
if iter % n_train_batches == 0:
print 'training @ iter = '+str(iter)+' average cost: '+str(cost_average)+' error: '+str(error_sum)+'/'+str(update_freq)+' error rate: '+str(error_sum*1.0/update_freq)
#if iter ==1:
# exit(0)
if iter % validation_frequency == 0:
#write_file=open('log.txt', 'w')
test_losses=[]
for i in test_batch_start:
test_loss, pred_y=test_model(i)
#test_losses = [test_model(i) for i in test_batch_start]
test_losses.append(test_loss)
#write_file.write(str(pred_y[0])+'\n')#+'\t'+str(testY[i].eval())+
#write_file.close()
test_score = numpy.mean(test_losses)
print(('\t\t\t\t\t\tepoch %i, minibatch %i/%i, test error of best '
'model %f %%') %
(epoch, minibatch_index, n_train_batches,
test_score * 100.))
'''
#print 'validating & testing...'
# compute zero-one loss on validation set
validation_losses = []
for i in dev_batch_start:
time.sleep(0.5)
validation_losses.append(validate_model(i))
#validation_losses = [validate_model(i) for i in dev_batch_start]
this_validation_loss = numpy.mean(validation_losses)
print('\t\tepoch %i, minibatch %i/%i, validation error %f %%' % \
(epoch, minibatch_index , n_train_batches, \
this_validation_loss * 100.))
# if we got the best validation score until now
if this_validation_loss < best_validation_loss:
#improve patience if loss improvement is good enough
if this_validation_loss < best_validation_loss * \
improvement_threshold:
patience = max(patience, iter * patience_increase)
# save best validation score and iteration number
best_validation_loss = this_validation_loss
best_iter = iter
# test it on the test set
test_losses = [test_model(i) for i in test_batch_start]
test_score = numpy.mean(test_losses)
print(('\t\t\t\tepoch %i, minibatch %i/%i, test error of best '
'model %f %%') %
(epoch, minibatch_index, n_train_batches,
test_score * 100.))
'''
if patience <= iter:
done_looping = True
break
end_time = time.clock()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' +
os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
# Reshape matrix of rasterized images of shape (batch_size,28*28)
# to a 4D tensor, compatible with our LeNetConvPoolLayer
#layer0_input = x.reshape(((batch_size*4), 1, ishape[0], ishape[1]))
layer0_D_input = embeddings[index_D.flatten()].reshape((maxDocLength,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_A1_input = embeddings[index_A1.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_A2_input = embeddings[index_A2.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_A3_input = embeddings[index_A3.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
conv_W, conv_b=create_conv_para(rng, filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]))
layer0_para=[conv_W, conv_b]
conv2_W, conv2_b=create_conv_para(rng, filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]))
layer2_para=[conv2_W, conv2_b]
high_W, high_b=create_highw_para(rng, nkerns[0], nkerns[1]) # this part decides nkern[0] and nkern[1] must be in the same dimension
highW_para=[high_W, high_b]
params = layer2_para+layer0_para+highW_para#+[embeddings]
layer0_D = Conv_with_input_para(rng, input=layer0_D_input,
image_shape=(maxDocLength, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]), W=conv_W, b=conv_b)
layer0_A1 = Conv_with_input_para(rng, input=layer0_A1_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]), W=conv_W, b=conv_b)
layer0_A2 = Conv_with_input_para(rng, input=layer0_A2_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
def evaluate_lenet5(learning_rate=0.02, n_epochs=100, emb_size=300, batch_size=50, filter_size=[3], sent_len=40, claim_len=20, cand_size=10,hidden_size=[300,300], max_pred_pick=5):
model_options = locals().copy()
print "model options", model_options
seed=1234
np.random.seed(seed)
rng = np.random.RandomState(seed) #random seed, control the model generates the same results
srng = T.shared_randomstreams.RandomStreams(rng.randint(seed))
"load raw data"
train_sents, train_sent_masks, train_sent_labels, train_claims, train_claim_mask, _, word2id = load_fever_train(sent_len, claim_len, cand_size)
test_sents, test_sent_masks, test_sent_labels, test_claims, test_claim_mask, test_sent_names,test_ground_names,_, word2id = load_fever_dev(sent_len, claim_len, cand_size, word2id)
train_sents=np.asarray(train_sents, dtype='int32')
# dev_sents_l=np.asarray(all_sentences_l[1], dtype='int32')
test_sents=np.asarray(test_sents, dtype='int32')
train_sent_masks=np.asarray(train_sent_masks, dtype=theano.config.floatX)
# dev_masks_l=np.asarray(all_masks_l[1], dtype=theano.config.floatX)
test_sent_masks=np.asarray(test_sent_masks, dtype=theano.config.floatX)
train_sent_labels=np.asarray(train_sent_labels, dtype='int32')
# dev_sents_r=np.asarray(all_sentences_r[1] , dtype='int32')
# test_sent_labels=np.asarray(test_sent_labels, dtype='int32')
train_claims=np.asarray(train_claims, dtype='int32')
# dev_sents_r=np.asarray(all_sentences_r[1] , dtype='int32')
test_claims=np.asarray(test_claims, dtype='int32')
train_claim_mask=np.asarray(train_claim_mask, dtype=theano.config.floatX)
# dev_masks_r=np.asarray(all_masks_r[1], dtype=theano.config.floatX)
test_claim_mask=np.asarray(test_claim_mask, dtype=theano.config.floatX)
# train_labels_store=np.asarray(all_labels[0], dtype='int32')
# dev_labels_store=np.asarray(all_labels[1], dtype='int32')
# test_labels_store=np.asarray(all_labels[2], dtype='int32')
train_size=len(train_claims)
# dev_size=len(dev_labels_store)
test_size=len(test_claims)
print 'train size: ', train_size, ' test size: ', test_size
vocab_size=len(word2id)+1
rand_values=rng.normal(0.0, 0.01, (vocab_size, emb_size)) #generate a matrix by Gaussian distribution
id2word = {y:x for x,y in word2id.iteritems()}
word2vec=load_word2vec()
rand_values=load_word2vec_to_init(rand_values, id2word, word2vec)
init_embeddings=theano.shared(value=np.array(rand_values,dtype=theano.config.floatX), borrow=True) #wrap up the python variable "rand_values" into theano variable
"now, start to build the input form of the model"
sents_ids=T.itensor3() #(batch, cand_size, sent_len)
sents_mask=T.ftensor3()
sents_labels=T.imatrix() #(batch, cand_size)
claim_ids = T.imatrix() #(batch, claim_len)
claim_mask = T.imatrix()
# labels=T.ivector()
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
embed_input_sents=init_embeddings[sents_ids.flatten()].reshape((batch_size*cand_size, sent_len, emb_size)).dimshuffle(0,2,1)#embed_input(init_embeddings, sents_ids_l)#embeddings[sents_ids_l.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1) #the input format can be adapted into CNN or GRU or LSTM
embed_input_claim=init_embeddings[claim_ids.flatten()].reshape((batch_size,claim_len, emb_size)).dimshuffle(0,2,1)
conv_W, conv_b=create_conv_para(rng, filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]))
# conv_W2, conv_b2=create_conv_para(rng, filter_shape=(hidden_size[0], 1, emb_size, filter_size[1]))
NN_para = [conv_W, conv_b]
conv_model_sents = Conv_with_Mask(rng, input_tensor3=embed_input_sents,
mask_matrix = sents_mask.reshape((sents_mask.shape[0]*sents_mask.shape[1],sents_mask.shape[2])),
image_shape=(batch_size*cand_size, 1, emb_size, sent_len),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]), W=conv_W, b=conv_b) #mutiple mask with the conv_out to set the features by UNK to zero
sent_embeddings=conv_model_sents.maxpool_vec #(batch_size*cand_size, hidden_size) # each sentence then have an embedding of length hidden_size
batch_sent_emb = sent_embeddings.reshape((batch_size, cand_size, hidden_size[0]))
conv_model_claims = Conv_with_Mask(rng, input_tensor3=embed_input_claim,
mask_matrix = claim_mask,
image_shape=(batch_size, 1, emb_size, claim_len),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]), W=conv_W, b=conv_b) #mutiple mask with the conv_out to set the features by UNK to zero
claim_embeddings=conv_model_claims.maxpool_vec #(batch_size, hidden_size) # each sentence then have an embedding of length hidden_size
batch_claim_emb = T.repeat(claim_embeddings.dimshuffle(0,'x', 1), cand_size, axis=1)
concate_claim_sent = T.concatenate([batch_claim_emb,batch_sent_emb ], axis=2)
concate_2_matrix = concate_claim_sent.reshape((batch_size*cand_size, hidden_size[0]*2))
LR_input = concate_2_matrix#T.concatenate([sent_embeddings,sent_embeddings2], axis=1)
LR_input_size = hidden_size[0]*2
#classification layer, it is just mapping from a feature vector of size "hidden_size" to a vector of only two values: positive, negative
U_a = create_ensemble_para(rng, 1, LR_input_size) # the weight matrix hidden_size*2
# LR_b = theano.shared(value=np.zeros((8,),dtype=theano.config.floatX),name='LR_b', borrow=True) #bias for each target class
LR_para=[U_a]
# layer_LR=LogisticRegression(rng, input=LR_input, n_in=LR_input_size, n_out=8, W=U_a, b=LR_b) #basically it is a multiplication between weight matrix and input feature vector
score_matrix = T.nnet.sigmoid(concate_2_matrix.dot(U_a)) #batch * 12
inter_matrix = score_matrix.reshape((batch_size, cand_size))
# inter_sent_claim = T.batched_dot(batch_sent_emb, batch_claim_emb) #(batch_size, cand_size, 1)
# inter_matrix = T.nnet.sigmoid(inter_sent_claim.reshape((batch_size, cand_size)))
'''
maybe 1.0-inter_matrix can be rewritten into 1/e^(inter_matrix)
'''
prob_pos = T.where( sents_labels < 1, 1.0-inter_matrix, inter_matrix)
loss = -T.mean(T.log(prob_pos))
#
# "Logistic Regression layer"
# LR_input = T.concatenate([attentive_sent_embeddings_l,attentive_sent_embeddings_r,attentive_sent_embeddings_l+attentive_sent_embeddings_r,attentive_sent_embeddings_l*attentive_sent_embeddings_r],axis=1)
# LR_input_size=4*hidden_size[0]
#
# U_a = create_ensemble_para(rng, 3, LR_input_size) # (input_size, 3)
# LR_b = theano.shared(value=np.zeros((3,),dtype=theano.config.floatX),name='LR_b', borrow=True) #bias for each target class
# LR_para=[U_a, LR_b]
#
# layer_LR=LogisticRegression(rng, input=normalize_matrix_col_wise(LR_input), n_in=LR_input_size, n_out=3, W=U_a, b=LR_b) #basically it is a multiplication between weight matrix and input feature vector
# loss=layer_LR.negative_log_likelihood(labels) #for classification task, we usually used negative log likelihood as loss, the lower the better.
'''
testing
'''
binarize_prob = T.where( inter_matrix > 0.5, 1, 0) #(batch_size, cand_size
params = [init_embeddings]+NN_para+LR_para
cost=loss
"Use AdaGrad to update parameters"
updates = Gradient_Cost_Para(cost,params, learning_rate)
train_model = theano.function([sents_ids,sents_mask,sents_labels,claim_ids,claim_mask], cost, updates=updates, allow_input_downcast=True, on_unused_input='ignore')
# dev_model = theano.function([sents_ids_l, sents_mask_l, sents_ids_r, sents_mask_r, labels], layer_LR.errors(labels), allow_input_downcast=True, on_unused_input='ignore')
test_model = theano.function([sents_ids,sents_mask,claim_ids,claim_mask], inter_matrix, allow_input_downcast=True, on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 50000000000 # look as this many examples regardless
start_time = time.time()
mid_time = start_time
past_time= mid_time
epoch = 0
done_looping = False
n_train_batches=train_size/batch_size
train_batch_start=list(np.arange(n_train_batches)*batch_size)+[train_size-batch_size]
# n_dev_batches=dev_size/batch_size
# dev_batch_start=list(np.arange(n_dev_batches)*batch_size)+[dev_size-batch_size]
n_test_batches=test_size/batch_size
test_batch_start=list(np.arange(n_test_batches)*batch_size)+[test_size-batch_size]
max_acc_dev=0.0
max_test_f1=0.0
cost_i=0.0
train_indices = range(train_size)
while epoch < n_epochs:
epoch = epoch + 1
random.Random(100).shuffle(train_indices) #shuffle training set for each new epoch, is supposed to promote performance, but not garrenteed
iter_accu=0
for batch_id in train_batch_start: #for each batch
# iter means how many batches have been run, taking into loop
iter = (epoch - 1) * n_train_batches + iter_accu +1
iter_accu+=1
train_id_batch = train_indices[batch_id:batch_id+batch_size]
'''
train_sents, train_sent_masks, train_sent_labels, train_claims, train_claim_mask
sents_ids,sents_mask,sents_labels,claim_ids,claim_mask
'''
cost_i+= train_model(
train_sents[train_id_batch],
train_sent_masks[train_id_batch],
train_sent_labels[train_id_batch],
train_claims[train_id_batch],
train_claim_mask[train_id_batch])
#after each 1000 batches, we test the performance of the model on all test data
# if (epoch==1 and iter%1000==0) or (epoch>=2 and iter%5==0):
if iter%10==0:
print 'Epoch ', epoch, 'iter '+str(iter)+' average cost: '+str(cost_i/iter), 'uses ', (time.time()-past_time)/60.0, 'min'
past_time = time.time()
'''
test
test_sents, test_sent_masks, test_sent_labels, test_claims, test_claim_mask,
sents_ids,sents_mask,claim_ids,claim_mask
'''
f1_sum=0.0
for test_batch_id in test_batch_start: # for each test batch
batch_prob=test_model(
test_sents[test_batch_id:test_batch_id+batch_size],
test_sent_masks[test_batch_id:test_batch_id+batch_size],
test_claims[test_batch_id:test_batch_id+batch_size],
test_claim_mask[test_batch_id:test_batch_id+batch_size])
batch_sent_labels = test_sent_labels[test_batch_id:test_batch_id+batch_size]
batch_sent_names = test_sent_names[test_batch_id:test_batch_id+batch_size]
batch_ground_names = test_ground_names[test_batch_id:test_batch_id+batch_size]
for i in range(batch_size):
pred_sent_names = []
gold_sent_names = batch_ground_names[i]
zipped=[(batch_prob[i,k],batch_sent_labels[i][k],batch_sent_names[i][k]) for k in range(cand_size)]
sorted_zip = sorted(zipped, key=lambda x: x[0], reverse=True)
# print 'sorted_zip:', sorted_zip
# exit(0)
for j in range(cand_size):
triple = sorted_zip[j]
if triple[1] == 1.0:
'''
we should consider a rank, instead of binary
'''
if triple[0] >0.5:
pred_sent_names.append(batch_sent_names[i][j])
if len(pred_sent_names) == max_pred_pick:
break
f1_i = compute_f1_two_list_names(pred_sent_names, gold_sent_names)
f1_sum+=f1_i
test_f1=f1_sum/(len(test_batch_start)*batch_size)
if test_f1 > max_test_f1:
max_test_f1=test_f1
print '\t\tcurrent test_f1:', test_f1,' ; ','\t\t\t\t\tmax_test_f1:', max_test_f1
print 'Epoch ', epoch, 'uses ', (time.time()-mid_time)/60.0, 'min'
mid_time = time.time()
#print 'Batch_size: ', update_freq
end_time = time.time()
print >> sys.stderr, ('The code for file ' +
os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
return max_acc_test
def evaluate_lenet5(learning_rate=0.05,
n_epochs=2000,
word_nkerns=50,
char_nkerns=4,
batch_size=1,
window_width=[2, 5],
emb_size=50,
char_emb_size=4,
hidden_size=200,
margin=0.5,
L2_weight=0.0003,
Div_reg=0.03,
update_freq=1,
norm_threshold=5.0,
max_truncate=40,
max_char_len=40,
max_des_len=20,
max_relation_len=5,
max_Q_len=30,
train_neg_size=21,
neg_all=100,
train_size=200,
test_size=200,
mark='_forfun'): #train_size=75909, test_size=17386
# maxSentLength=max_truncate+2*(window_width-1)
model_options = locals().copy()
print "model options", model_options
rootPath = '/mounts/data/proj/wenpeng/Dataset/freebase/SimpleQuestions_v2/'
triple_files = [
'annotated_fb_data_train.entitylinking.top20_succSet_asInput.txt',
'annotated_fb_data_test.entitylinking.top20_succSet_asInput.txt'
]
rng = numpy.random.RandomState(23455)
datasets, datasets_test, length_per_example_test, vocab_size, char_size = load_train(
triple_files[0], triple_files[1], max_char_len, max_des_len,
max_relation_len, max_Q_len, train_size, test_size,
mark) #max_char_len, max_des_len, max_relation_len, max_Q_len
print 'vocab_size:', vocab_size, 'char_size:', char_size
train_data = datasets
# valid_data=datasets[1]
test_data = datasets_test
# result=(pos_entity_char, pos_entity_des, relations, entity_char_lengths, entity_des_lengths, relation_lengths, mention_char_ids, remainQ_word_ids, mention_char_lens, remainQ_word_lens, entity_scores)
#
train_pos_entity_char = train_data[0]
train_pos_entity_des = train_data[1]
train_relations = train_data[2]
train_entity_char_lengths = train_data[3]
train_entity_des_lengths = train_data[4]
train_relation_lengths = train_data[5]
train_mention_char_ids = train_data[6]
train_remainQ_word_ids = train_data[7]
train_mention_char_lens = train_data[8]
train_remainQ_word_len = train_data[9]
train_entity_scores = train_data[10]
test_pos_entity_char = test_data[0]
test_pos_entity_des = test_data[1]
test_relations = test_data[2]
test_entity_char_lengths = test_data[3]
test_entity_des_lengths = test_data[4]
test_relation_lengths = test_data[5]
test_mention_char_ids = test_data[6]
test_remainQ_word_ids = test_data[7]
test_mention_char_lens = test_data[8]
test_remainQ_word_len = test_data[9]
test_entity_scores = test_data[10]
#
# test_pos_entity_char=test_data[0] #matrix, each row for line example, all head and tail entity, iteratively: 40*2*51
# test_pos_entity_des=test_data[1] #matrix, each row for a examle: 20*2*51
# test_relations=test_data[2] #matrix, each row for a example: 5*51
# test_entity_char_lengths=test_data[3] #matrix, each row for a example: 3*2*51 (three valies for one entity)
# test_entity_des_lengths=test_data[4] #matrix, each row for a example: 3*2*51 (three values for one entity)
# test_relation_lengths=test_data[5] #matrix, each row for a example: 3*51
# test_mention_char_ids=test_data[6] #matrix, each row for a mention: 40
# test_remainQ_word_ids=test_data[7] #matrix, each row for a question: 30
# test_mention_char_lens=test_data[8] #matrix, each three values for a mention: 3
# test_remainQ_word_len=test_data[9] #matrix, each three values for a remain question: 3
train_sizes=[len(train_pos_entity_char), len(train_pos_entity_des), len(train_relations), len(train_entity_char_lengths), len(train_entity_des_lengths),\
len(train_relation_lengths), len(train_mention_char_ids), len(train_remainQ_word_ids), len(train_mention_char_lens), len(train_remainQ_word_len), len(train_entity_scores)]
if sum(train_sizes) / len(train_sizes) != train_size:
print 'weird size:', train_sizes
exit(0)
test_sizes=[len(test_pos_entity_char), len(test_pos_entity_des), len(test_relations), len(test_entity_char_lengths), len(test_entity_des_lengths),\
len(test_relation_lengths), len(test_mention_char_ids), len(test_remainQ_word_ids), len(test_mention_char_lens), len(test_remainQ_word_len), len(test_entity_scores)]
if sum(test_sizes) / len(test_sizes) != test_size:
print 'weird size:', test_sizes
exit(0)
n_train_batches = train_size / batch_size
n_test_batches = test_size / batch_size
train_batch_start = list(numpy.arange(n_train_batches) * batch_size)
test_batch_start = list(numpy.arange(n_test_batches) * batch_size)
indices_train_pos_entity_char = pythonList_into_theanoIntMatrix(
train_pos_entity_char)
indices_train_pos_entity_des = pythonList_into_theanoIntMatrix(
train_pos_entity_des)
indices_train_relations = pythonList_into_theanoIntMatrix(train_relations)
indices_train_entity_char_lengths = pythonList_into_theanoIntMatrix(
train_entity_char_lengths)
indices_train_entity_des_lengths = pythonList_into_theanoIntMatrix(
train_entity_des_lengths)
indices_train_relation_lengths = pythonList_into_theanoIntMatrix(
train_relation_lengths)
indices_train_mention_char_ids = pythonList_into_theanoIntMatrix(
train_mention_char_ids)
indices_train_remainQ_word_ids = pythonList_into_theanoIntMatrix(
train_remainQ_word_ids)
indices_train_mention_char_lens = pythonList_into_theanoIntMatrix(
train_mention_char_lens)
indices_train_remainQ_word_len = pythonList_into_theanoIntMatrix(
train_remainQ_word_len)
indices_train_entity_scores = pythonList_into_theanoFloatMatrix(
train_entity_scores)
# indices_test_pos_entity_char=pythonList_into_theanoIntMatrix(test_pos_entity_char)
# indices_test_pos_entity_des=pythonList_into_theanoIntMatrix(test_pos_entity_des)
# indices_test_relations=pythonList_into_theanoIntMatrix(test_relations)
# indices_test_entity_char_lengths=pythonList_into_theanoIntMatrix(test_entity_char_lengths)
# indices_test_entity_des_lengths=pythonList_into_theanoIntMatrix(test_entity_des_lengths)
# indices_test_relation_lengths=pythonList_into_theanoIntMatrix(test_relation_lengths)
# indices_test_mention_char_ids=pythonList_into_theanoIntMatrix(test_mention_char_ids)
# indices_test_remainQ_word_ids=pythonList_into_theanoIntMatrix(test_remainQ_word_ids)
# indices_test_mention_char_lens=pythonList_into_theanoIntMatrix(test_mention_char_lens)
# indices_test_remainQ_word_len=pythonList_into_theanoIntMatrix(test_remainQ_word_len)
# indices_test_entity_scores=pythonList_into_theanoIntMatrix(test_entity_scores)
rand_values = random_value_normal((vocab_size + 1, emb_size),
theano.config.floatX,
numpy.random.RandomState(1234))
rand_values[0] = numpy.array(numpy.zeros(emb_size),
dtype=theano.config.floatX)
#rand_values[0]=numpy.array([1e-50]*emb_size)
rand_values = load_word2vec_to_init(rand_values,
rootPath + 'word_emb' + mark + '.txt')
embeddings = theano.shared(value=rand_values, borrow=True)
char_rand_values = random_value_normal((char_size + 1, char_emb_size),
theano.config.floatX,
numpy.random.RandomState(1234))
char_rand_values[0] = numpy.array(numpy.zeros(char_emb_size),
dtype=theano.config.floatX)
char_embeddings = theano.shared(value=char_rand_values, borrow=True)
# allocate symbolic variables for the data
index = T.lscalar()
chosed_indices = T.lvector()
ent_char_ids_M = T.lmatrix()
ent_lens_M = T.lmatrix()
men_char_ids_M = T.lmatrix()
men_lens_M = T.lmatrix()
rel_word_ids_M = T.lmatrix()
rel_word_lens_M = T.lmatrix()
desH_word_ids_M = T.lmatrix()
desH_word_lens_M = T.lmatrix()
# desT_word_ids_M=T.lmatrix()
# desT_word_lens_M=T.lmatrix()
q_word_ids_M = T.lmatrix()
q_word_lens_M = T.lmatrix()
ent_scores = T.dvector()
#max_char_len, max_des_len, max_relation_len, max_Q_len
# ent_men_ishape = (char_emb_size, max_char_len) # this is the size of MNIST images
# rel_ishape=(emb_size, max_relation_len)
# des_ishape=(emb_size, max_des_len)
# q_ishape=(emb_size, max_Q_len)
filter_size = (emb_size, window_width[0])
char_filter_size = (char_emb_size, window_width[1])
#poolsize1=(1, ishape[1]-filter_size[1]+1) #?????????????????????????????
# length_after_wideConv=ishape[1]+filter_size[1]-1
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
char_filter_shape = (char_nkerns, 1, char_filter_size[0],
char_filter_size[1])
word_filter_shape = (word_nkerns, 1, filter_size[0], filter_size[1])
char_conv_W, char_conv_b = create_conv_para(rng,
filter_shape=char_filter_shape)
q_rel_conv_W, q_rel_conv_b = create_conv_para(
rng, filter_shape=word_filter_shape)
q_desH_conv_W, q_desH_conv_b = create_conv_para(
rng, filter_shape=word_filter_shape)
params = [
char_embeddings, embeddings, char_conv_W, char_conv_b, q_rel_conv_W,
q_rel_conv_b, q_desH_conv_W, q_desH_conv_b
]
char_conv_W_into_matrix = char_conv_W.reshape(
(char_conv_W.shape[0], char_conv_W.shape[2] * char_conv_W.shape[3]))
q_rel_conv_W_into_matrix = q_rel_conv_W.reshape(
(q_rel_conv_W.shape[0], q_rel_conv_W.shape[2] * q_rel_conv_W.shape[3]))
q_desH_conv_W_into_matrix = q_desH_conv_W.reshape(
(q_desH_conv_W.shape[0],
q_desH_conv_W.shape[2] * q_desH_conv_W.shape[3]))
# load_model_from_file(rootPath, params, '')
def SimpleQ_matches_Triple(ent_char_ids_f, ent_lens_f, rel_word_ids_f,
rel_word_lens_f, desH_word_ids_f,
desH_word_lens_f, men_char_ids_f, q_word_ids_f,
men_lens_f, q_word_lens_f):
# rng = numpy.random.RandomState(23455)
ent_char_input = char_embeddings[ent_char_ids_f.flatten()].reshape(
(batch_size, max_char_len,
char_emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
men_char_input = char_embeddings[men_char_ids_f.flatten()].reshape(
(batch_size, max_char_len,
char_emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
rel_word_input = embeddings[rel_word_ids_f.flatten()].reshape(
(batch_size, max_relation_len,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
desH_word_input = embeddings[desH_word_ids_f.flatten()].reshape(
(batch_size, max_des_len,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
# desT_word_input = embeddings[desT_word_ids_f.flatten()].reshape((batch_size,max_des_len, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
q_word_input = embeddings[q_word_ids_f.flatten()].reshape(
(batch_size, max_Q_len,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
#ent_mention
ent_char_conv = Conv_with_input_para(rng,
input=ent_char_input,
image_shape=(batch_size, 1,
char_emb_size,
max_char_len),
filter_shape=char_filter_shape,
W=char_conv_W,
b=char_conv_b)
men_char_conv = Conv_with_input_para(rng,
input=men_char_input,
image_shape=(batch_size, 1,
char_emb_size,
max_char_len),
filter_shape=char_filter_shape,
W=char_conv_W,
b=char_conv_b)
#q-rel
q_rel_conv = Conv_with_input_para(rng,
input=q_word_input,
image_shape=(batch_size, 1, emb_size,
max_Q_len),
filter_shape=word_filter_shape,
W=q_rel_conv_W,
b=q_rel_conv_b)
rel_conv = Conv_with_input_para(rng,
input=rel_word_input,
image_shape=(batch_size, 1, emb_size,
max_relation_len),
filter_shape=word_filter_shape,
W=q_rel_conv_W,
b=q_rel_conv_b)
#q_desH
q_desH_conv = Conv_with_input_para(rng,
input=q_word_input,
image_shape=(batch_size, 1,
emb_size, max_Q_len),
filter_shape=word_filter_shape,
W=q_desH_conv_W,
b=q_desH_conv_b)
desH_conv = Conv_with_input_para(rng,
input=desH_word_input,
image_shape=(batch_size, 1, emb_size,
max_des_len),
filter_shape=word_filter_shape,
W=q_desH_conv_W,
b=q_desH_conv_b)
# #q_desT
# q_desT_conv = Conv_with_input_para(rng, input=q_word_input,
# image_shape=(batch_size, 1, emb_size, max_Q_len),
# filter_shape=word_filter_shape, W=q_desT_conv_W, b=q_desT_conv_b)
# desT_conv = Conv_with_input_para(rng, input=desT_word_input,
# image_shape=(batch_size, 1, emb_size, max_des_len),
# filter_shape=word_filter_shape, W=q_desT_conv_W, b=q_desT_conv_b)
# ent_char_output=debug_print(ent_char_conv.output, 'ent_char.output')
# men_char_output=debug_print(men_char_conv.output, 'men_char.output')
ent_conv_pool = Max_Pooling(rng,
input_l=ent_char_conv.output,
left_l=ent_lens_f[0],
right_l=ent_lens_f[2])
men_conv_pool = Max_Pooling(rng,
input_l=men_char_conv.output,
left_l=men_lens_f[0],
right_l=men_lens_f[2])
# q_rel_pool=Max_Pooling(rng, input_l=q_rel_conv.output, left_l=q_word_lens_f[0], right_l=q_word_lens_f[2])
rel_conv_pool = Max_Pooling(rng,
input_l=rel_conv.output,
left_l=rel_word_lens_f[0],
right_l=rel_word_lens_f[2])
q_rel_pool = Average_Pooling_for_SimpleQA(
rng,
input_l=q_rel_conv.output,
input_r=rel_conv_pool.output_maxpooling,
left_l=q_word_lens_f[0],
right_l=q_word_lens_f[2],
length_l=q_word_lens_f[1] + filter_size[1] - 1,
dim=max_Q_len + filter_size[1] - 1,
topk=2)
q_desH_pool = Max_Pooling(rng,
input_l=q_desH_conv.output,
left_l=q_word_lens_f[0],
right_l=q_word_lens_f[2])
desH_conv_pool = Max_Pooling(rng,
input_l=desH_conv.output,
left_l=desH_word_lens_f[0],
right_l=desH_word_lens_f[2])
# q_desT_pool=Max_Pooling(rng, input_l=q_desT_conv.output, left_l=q_word_lens[0], right_l=q_word_lens[2])
# desT_conv_pool=Max_Pooling(rng, input_l=desT_conv.output, left_l=desT_word_lens_f[0], right_l=desT_word_lens_f[2])
overall_simi=(cosine(ent_conv_pool.output_maxpooling, men_conv_pool.output_maxpooling)+\
cosine(q_rel_pool.topk_max_pooling, rel_conv_pool.output_maxpooling)+\
0.1*cosine(q_desH_pool.output_maxpooling, desH_conv_pool.output_maxpooling))/3.0
# cosine(q_desT_pool.output_maxpooling, desT_conv_pool.output_maxpooling)
return overall_simi
simi_list, updates = theano.scan(SimpleQ_matches_Triple,
sequences=[
ent_char_ids_M, ent_lens_M,
rel_word_ids_M, rel_word_lens_M,
desH_word_ids_M, desH_word_lens_M,
men_char_ids_M, q_word_ids_M,
men_lens_M, q_word_lens_M
])
simi_list += 0.5 * ent_scores
posi_simi = simi_list[0]
nega_simies = simi_list[1:]
loss_simi_list = T.maximum(
0.0, margin - posi_simi.reshape((1, 1)) + nega_simies)
loss_simi = T.mean(loss_simi_list)
#L2_reg =(layer3.W** 2).sum()+(layer2.W** 2).sum()+(layer1.W** 2).sum()+(conv_W** 2).sum()
L2_reg = debug_print(
(char_embeddings**2).sum() + (embeddings**2).sum() +
(char_conv_W**2).sum() + (q_rel_conv_W**2).sum() +
(q_desH_conv_W**2).sum(),
'L2_reg') #+(layer1.W** 2).sum()++(embeddings**2).sum()
diversify_reg = Diversify_Reg(char_conv_W_into_matrix) + Diversify_Reg(
q_rel_conv_W_into_matrix) + Diversify_Reg(q_desH_conv_W_into_matrix)
cost = loss_simi + L2_weight * L2_reg + Div_reg * diversify_reg
#cost=debug_print((cost_this+cost_tmp)/update_freq, 'cost')
test_model = theano.function([
ent_char_ids_M, ent_lens_M, men_char_ids_M, men_lens_M, rel_word_ids_M,
rel_word_lens_M, desH_word_ids_M, desH_word_lens_M, q_word_ids_M,
q_word_lens_M, ent_scores
], [loss_simi, simi_list],
on_unused_input='ignore')
# givens={
# ent_char_ids_M : test_pos_entity_char[index].reshape((length_per_example_test[index], max_char_len)),
# ent_lens_M : test_entity_char_lengths[index].reshape((length_per_example_test[index], 3)),
# men_char_ids_M : test_mention_char_ids[index].reshape((length_per_example_test[index], max_char_len)),
# men_lens_M : test_mention_char_lens[index].reshape((length_per_example_test[index], 3)),
# rel_word_ids_M : test_relations[index].reshape((length_per_example_test[index], max_relation_len)),
# rel_word_lens_M : test_relation_lengths[index].reshape((length_per_example_test[index], 3)),
# desH_word_ids_M : test_pos_entity_des[index].reshape((length_per_example_test[index], max_des_len)),
# desH_word_lens_M : test_entity_des_lengths[index].reshape((length_per_example_test[index], 3)),
# # desT_word_ids_M : indices_train_pos_entity_des[index].reshape(((neg_all)*2, max_des_len))[1::2],
# # desT_word_lens_M : indices_train_entity_des_lengths[index].reshape(((neg_all)*2, 3))[1::2],
# q_word_ids_M : test_remainQ_word_ids[index].reshape((length_per_example_test[index], max_Q_len)),
# q_word_lens_M : test_remainQ_word_len[index].reshape((length_per_example_test[index], 3)),
# ent_scores : test_entity_scores[index]},
#params = layer3.params + layer2.params + layer1.params+ [conv_W, conv_b]
#+[embeddings]# + layer1.params
# params_conv = [conv_W, conv_b]
accumulator = []
for para_i in params:
eps_p = numpy.zeros_like(para_i.get_value(borrow=True),
dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
grad_i = debug_print(grad_i, 'grad_i')
acc = acc_i + T.sqr(grad_i)
# updates.append((param_i, param_i - learning_rate * grad_i / T.sqrt(acc+1e-10))) #AdaGrad
# updates.append((acc_i, acc))
if param_i == embeddings:
updates.append(
(param_i,
T.set_subtensor(
(param_i -
learning_rate * grad_i / T.sqrt(acc + 1e-10))[0],
theano.shared(numpy.zeros(emb_size))))) #Ada
elif param_i == char_embeddings:
updates.append(
(param_i,
T.set_subtensor(
(param_i -
learning_rate * grad_i / T.sqrt(acc + 1e-10))[0],
theano.shared(numpy.zeros(char_emb_size))))) #AdaGrad
else:
updates.append(
(param_i, param_i -
learning_rate * grad_i / T.sqrt(acc + 1e-10))) #AdaGrad
updates.append((acc_i, acc))
train_model = theano.function(
[index, chosed_indices],
[loss_simi, cost],
updates=updates,
givens={
ent_char_ids_M:
indices_train_pos_entity_char[index].reshape(
(neg_all, max_char_len))[chosed_indices].reshape(
(train_neg_size, max_char_len)),
ent_lens_M:
indices_train_entity_char_lengths[index].reshape(
(neg_all, 3))[chosed_indices].reshape((train_neg_size, 3)),
men_char_ids_M:
indices_train_mention_char_ids[index].reshape(
(neg_all, max_char_len))[chosed_indices].reshape(
(train_neg_size, max_char_len)),
men_lens_M:
indices_train_mention_char_lens[index].reshape(
(neg_all, 3))[chosed_indices].reshape((train_neg_size, 3)),
rel_word_ids_M:
indices_train_relations[index].reshape(
(neg_all, max_relation_len))[chosed_indices].reshape(
(train_neg_size, max_relation_len)),
rel_word_lens_M:
indices_train_relation_lengths[index].reshape(
(neg_all, 3))[chosed_indices].reshape((train_neg_size, 3)),
desH_word_ids_M:
indices_train_pos_entity_des[index].reshape(
(neg_all, max_des_len))[chosed_indices].reshape(
(train_neg_size, max_des_len)),
desH_word_lens_M:
indices_train_entity_des_lengths[index].reshape(
(neg_all, 3))[chosed_indices].reshape((train_neg_size, 3)),
# desT_word_ids_M : indices_train_pos_entity_des[index].reshape(((neg_all)*2, max_des_len))[1::2],
# desT_word_lens_M : indices_train_entity_des_lengths[index].reshape(((neg_all)*2, 3))[1::2],
q_word_ids_M:
indices_train_remainQ_word_ids[index].reshape(
(neg_all, max_Q_len))[chosed_indices].reshape(
(train_neg_size, max_Q_len)),
q_word_lens_M:
indices_train_remainQ_word_len[index].reshape(
(neg_all, 3))[chosed_indices].reshape((train_neg_size, 3)),
ent_scores:
indices_train_entity_scores[index][chosed_indices]
},
on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
patience_increase = 2 # wait this much longer when a new best is
# found
improvement_threshold = 0.995 # a relative improvement of this much is
# considered significant
validation_frequency = min(n_train_batches, patience / 2)
# go through this many
# minibatche before checking the network
# on the validation set; in this case we
# check every epoch
best_params = None
best_validation_loss = numpy.inf
best_iter = 0
test_score = 0.
start_time = time.clock()
mid_time = start_time
epoch = 0
done_looping = False
best_test_accu = 0.0
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
#for minibatch_index in xrange(n_train_batches): # each batch
minibatch_index = 0
for batch_start in train_batch_start:
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * n_train_batches + minibatch_index + 1
minibatch_index = minibatch_index + 1
#print batch_start
sample_indices = [0] + random.sample(range(1, neg_all),
train_neg_size - 1)
loss_simi_i, cost_i = train_model(batch_start, sample_indices)
# if batch_start%1==0:
# print batch_start, '\t loss_simi_i: ', loss_simi_i, 'cost_i:', cost_i
# store_model_to_file(rootPath, params)
if iter % n_train_batches == 0:
print 'training @ iter = ' + str(
iter) + '\tloss_simi_i: ', loss_simi_i, 'cost_i:', cost_i
#if iter ==1:
# exit(0)
#
if iter % n_train_batches == 0:
test_loss = []
succ = 0
for i in range(test_size):
# print 'testing', i, '...'
#prepare data
test_ent_char_ids_M = numpy.asarray(
test_pos_entity_char[i], dtype='int64').reshape(
(length_per_example_test[i], max_char_len))
test_ent_lens_M = numpy.asarray(
test_entity_char_lengths[i], dtype='int64').reshape(
(length_per_example_test[i], 3))
test_men_char_ids_M = numpy.asarray(
test_mention_char_ids[i], dtype='int64').reshape(
(length_per_example_test[i], max_char_len))
test_men_lens_M = numpy.asarray(
test_mention_char_lens[i], dtype='int64').reshape(
(length_per_example_test[i], 3))
test_rel_word_ids_M = numpy.asarray(
test_relations[i], dtype='int64').reshape(
(length_per_example_test[i], max_relation_len))
test_rel_word_lens_M = numpy.asarray(
test_relation_lengths[i], dtype='int64').reshape(
(length_per_example_test[i], 3))
test_desH_word_ids_M = numpy.asarray(
test_pos_entity_des[i], dtype='int64').reshape(
(length_per_example_test[i], max_des_len))
test_desH_word_lens_M = numpy.asarray(
test_entity_des_lengths[i], dtype='int64').reshape(
(length_per_example_test[i], 3))
test_q_word_ids_M = numpy.asarray(
test_remainQ_word_ids[i], dtype='int64').reshape(
(length_per_example_test[i], max_Q_len))
test_q_word_lens_M = numpy.asarray(
test_remainQ_word_len[i], dtype='int64').reshape(
(length_per_example_test[i], 3))
test_ent_scores = numpy.asarray(test_entity_scores[i],
dtype=theano.config.floatX)
loss_simi_i, simi_list_i = test_model(
test_ent_char_ids_M, test_ent_lens_M,
test_men_char_ids_M, test_men_lens_M,
test_rel_word_ids_M, test_rel_word_lens_M,
test_desH_word_ids_M, test_desH_word_lens_M,
test_q_word_ids_M, test_q_word_lens_M, test_ent_scores)
# print 'simi_list_i:', simi_list_i[:10]
test_loss.append(loss_simi_i)
if simi_list_i[0] >= max(simi_list_i[1:]):
succ += 1
# print 'testing', i, '...acc:', succ*1.0/(i+1)
succ = succ * 1.0 / test_size
#now, check MAP and MRR
print((
'\t\t\t\t\t\tepoch %i, minibatch %i/%i, test accu of best '
'model %f') %
(epoch, minibatch_index, n_train_batches, succ))
if best_test_accu < succ:
best_test_accu = succ
store_model_to_file(rootPath, params, mark)
if patience <= iter:
done_looping = True
break
print 'Epoch ', epoch, 'uses ', (time.clock() - mid_time) / 60.0, 'min'
mid_time = time.clock()
#print 'Batch_size: ', update_freq
end_time = time.clock()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' + os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(learning_rate=0.1, n_epochs=2000, word_nkerns=300, batch_size=1, window_width=[3,3],
emb_size=300,
margin=0.5, L2_weight=0.0003, Div_reg=0.03, update_freq=1, norm_threshold=5.0, max_truncate=40,
max_relation_len=6, max_Q_len=30,
neg_all=100, train_size=69967, test_size=19953, mark='_RC_newdata'): #train_size=75909, test_size=17386
# maxSentLength=max_truncate+2*(window_width-1)
model_options = locals().copy()
print "model options", model_options
rootPath='/home/wyin/Datasets/SimpleQuestions_v2/relation_classification/'
triple_files=['train.replace_ne.withpoolwenpengFormat.txt', 'test.replace_ne.withpoolwenpengFormat.txt']
rng = numpy.random.RandomState(23455)
datasets, datasets_test, length_per_example_train, length_per_example_test, vocab_size=load_train(triple_files[0], triple_files[1], max_relation_len, max_Q_len, train_size, test_size, mark)#max_char_len, max_des_len, max_relation_len, max_Q_len
print 'vocab_size:', vocab_size
train_data=datasets
# valid_data=datasets[1]
test_data=datasets_test
# result=(pos_entity_char, pos_entity_des, relations, entity_char_lengths, entity_des_lengths, relation_lengths, mention_char_ids, remainQ_word_ids, mention_char_lens, remainQ_word_lens, entity_scores)
#
train_relations=train_data[0]
train_relation_lengths=train_data[1]
train_remainQ_word_ids=train_data[2]
train_remainQ_word_len=train_data[3]
test_relations=test_data[0]
test_relation_lengths=test_data[1]
test_remainQ_word_ids=test_data[2]
test_remainQ_word_len=test_data[3]
train_sizes=[len(train_relations),len(train_relation_lengths),len(train_remainQ_word_ids), len(train_remainQ_word_len)]
if sum(train_sizes)/len(train_sizes)!=train_size:
print 'weird size:', train_sizes
exit(0)
test_sizes=[len(test_relations),len(test_relation_lengths), len(test_remainQ_word_ids),len(test_remainQ_word_len)]
if sum(test_sizes)/len(test_sizes)!=test_size:
print 'weird size:', test_sizes
exit(0)
n_train_batches=train_size/batch_size
n_test_batches=test_size/batch_size
# indices_train_pos_entity_char=theano.shared(numpy.asarray(train_pos_entity_char, dtype='int32'), borrow=True)
# indices_train_pos_entity_des=theano.shared(numpy.asarray(train_pos_entity_des, dtype='int32'), borrow=True)
# indices_train_relations=theano.shared(numpy.asarray(train_relations, dtype='int32'), borrow=True)
# indices_train_entity_char_lengths=theano.shared(numpy.asarray(train_entity_char_lengths, dtype='int32'), borrow=True)
# indices_train_entity_des_lengths=theano.shared(numpy.asarray(train_entity_des_lengths, dtype='int32'), borrow=True)
# indices_train_relation_lengths=theano.shared(numpy.asarray(train_relation_lengths, dtype='int32'), borrow=True)
# indices_train_mention_char_ids=theano.shared(numpy.asarray(train_mention_char_ids, dtype='int32'), borrow=True)
# indices_train_remainQ_word_ids=theano.shared(numpy.asarray(train_remainQ_word_ids, dtype='int32'), borrow=True)
# indices_train_mention_char_lens=theano.shared(numpy.asarray(train_mention_char_lens, dtype='int32'), borrow=True)
# indices_train_remainQ_word_len=theano.shared(numpy.asarray(train_remainQ_word_len, dtype='int32'), borrow=True)
# indices_train_entity_scores=theano.shared(numpy.asarray(train_entity_scores, dtype=theano.config.floatX), borrow=True)
rand_values=random_value_normal((vocab_size+1, emb_size), theano.config.floatX, numpy.random.RandomState(1234))
rand_values[0]=numpy.array(numpy.zeros(emb_size),dtype=theano.config.floatX)
#rand_values[0]=numpy.array([1e-50]*emb_size)
# rand_values=load_word2vec_to_init(rand_values, rootPath+'word_emb'+mark+'.txt')
embeddings=theano.shared(value=rand_values, borrow=True)
# allocate symbolic variables for the data
index = T.iscalar()
rel_word_ids_M=T.imatrix()
rel_word_lens_M=T.imatrix()
q_word_ids_f=T.ivector()
q_word_lens_f=T.ivector()
filter_size=(emb_size,window_width[0])
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
word_filter_shape=(word_nkerns, 1, filter_size[0], filter_size[1])
q_rel_conv_W, q_rel_conv_b=create_conv_para(rng, filter_shape=word_filter_shape)
params = [embeddings,q_rel_conv_W, q_rel_conv_b]
q_rel_conv_W_into_matrix=q_rel_conv_W.reshape((q_rel_conv_W.shape[0], q_rel_conv_W.shape[2]*q_rel_conv_W.shape[3]))
# load_model_from_file(rootPath, params, '')
def SimpleQ_matches_Triple(rel_word_ids_f,rel_word_lens_f):
rel_word_input = embeddings[rel_word_ids_f.flatten()].reshape((batch_size,max_relation_len, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
q_word_input = embeddings[q_word_ids_f.flatten()].reshape((batch_size,max_Q_len, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
#q-rel
q_rel_conv = Conv_with_input_para(rng, input=q_word_input,
image_shape=(batch_size, 1, emb_size, max_Q_len),
filter_shape=word_filter_shape, W=q_rel_conv_W, b=q_rel_conv_b)
rel_conv = Conv_with_input_para(rng, input=rel_word_input,
image_shape=(batch_size, 1, emb_size, max_relation_len),
filter_shape=word_filter_shape, W=q_rel_conv_W, b=q_rel_conv_b)
# q_rel_pool=Max_Pooling(rng, input_l=q_rel_conv.output, left_l=q_word_lens_f[0], right_l=q_word_lens_f[2])
rel_conv_pool=Max_Pooling(rng, input_l=rel_conv.output, left_l=rel_word_lens_f[0], right_l=rel_word_lens_f[2])
q_rel_pool=Average_Pooling_for_SimpleQA(rng, input_l=q_rel_conv.output, input_r=rel_conv_pool.output_maxpooling,
left_l=q_word_lens_f[0], right_l=q_word_lens_f[2], length_l=q_word_lens_f[1]+filter_size[1]-1,
dim=max_Q_len+filter_size[1]-1, topk=2)
overall_simi=cosine(q_rel_pool.output_maxpooling, rel_conv_pool.output_maxpooling)
return overall_simi
simi_list, updates = theano.scan(
SimpleQ_matches_Triple,
sequences=[rel_word_ids_M,rel_word_lens_M])
posi_simi=simi_list[0]
nega_simies=simi_list[1:]
loss_simi_list=T.maximum(0.0, margin-posi_simi.reshape((1,1))+nega_simies)
loss_simi=T.sum(loss_simi_list)
#L2_reg =(layer3.W** 2).sum()+(layer2.W** 2).sum()+(layer1.W** 2).sum()+(conv_W** 2).sum()
L2_reg =debug_print((embeddings** 2).sum()+(q_rel_conv_W** 2).sum(), 'L2_reg')#+(layer1.W** 2).sum()++(embeddings**2).sum()
diversify_reg= Diversify_Reg(q_rel_conv_W_into_matrix)
cost=loss_simi+L2_weight*L2_reg+Div_reg*diversify_reg
#cost=debug_print((cost_this+cost_tmp)/update_freq, 'cost')
test_model = theano.function([rel_word_ids_M, rel_word_lens_M, q_word_ids_f, q_word_lens_f], [loss_simi, simi_list],on_unused_input='ignore')
accumulator=[]
for para_i in params:
eps_p=numpy.zeros_like(para_i.get_value(borrow=True),dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
grad_i=debug_print(grad_i,'grad_i')
acc = acc_i + T.sqr(grad_i)
# updates.append((param_i, param_i - learning_rate * grad_i / T.sqrt(acc+1e-10))) #AdaGrad
# updates.append((acc_i, acc))
if param_i == embeddings:
updates.append((param_i, T.set_subtensor((param_i - learning_rate * grad_i / T.sqrt(acc+1e-10))[0], theano.shared(numpy.zeros(emb_size))))) #Ada
else:
updates.append((param_i, param_i - learning_rate * grad_i / T.sqrt(acc+1e-10))) #AdaGrad
updates.append((acc_i, acc))
train_model = theano.function([rel_word_ids_M, rel_word_lens_M, q_word_ids_f, q_word_lens_f], [loss_simi, cost],updates=updates, on_unused_input='ignore')
# train_model = theano.function([index, chosed_indices], [loss_simi, cost], updates=updates,
# givens={
# rel_word_ids_M : indices_train_relations[index].reshape((neg_all, max_relation_len))[chosed_indices].reshape((train_neg_size, max_relation_len)),
# rel_word_lens_M : indices_train_relation_lengths[index].reshape((neg_all, 3))[chosed_indices].reshape((train_neg_size, 3)),
# q_word_ids_M : indices_train_remainQ_word_ids[index].reshape((neg_all, max_Q_len))[chosed_indices].reshape((train_neg_size, max_Q_len)),
# q_word_lens_M : indices_train_remainQ_word_len[index].reshape((neg_all, 3))[chosed_indices].reshape((train_neg_size, 3))
#
# }, on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
patience_increase = 2 # wait this much longer when a new best is
# found
improvement_threshold = 0.995 # a relative improvement of this much is
# considered significant
validation_frequency = min(n_train_batches, patience / 2)
# go through this many
# minibatche before checking the network
# on the validation set; in this case we
# check every epoch
best_params = None
best_validation_loss = numpy.inf
best_iter = 0
test_score = 0.
start_time = time.clock()
mid_time = start_time
epoch = 0
done_looping = False
best_test_accu=0.0
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
#for minibatch_index in xrange(n_train_batches): # each batch
minibatch_index=0
for jj in range(train_size):
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * n_train_batches + minibatch_index +1
minibatch_index=minibatch_index+1
#print batch_start
train_rel_word_ids_M = numpy.asarray(train_relations[jj], dtype='int32').reshape((length_per_example_train[jj], max_relation_len))
train_rel_word_lens_M = numpy.asarray(train_relation_lengths[jj], dtype='int32').reshape((length_per_example_train[jj], 3))
train_q_word_ids_M = numpy.asarray(train_remainQ_word_ids[jj], dtype='int32')#.reshape((length_per_example_train[jj], max_Q_len))
train_q_word_lens_M = numpy.asarray(train_remainQ_word_len[jj], dtype='int32')#.reshape((length_per_example_train[jj], 3))
loss_simi_i, cost_i=train_model(train_rel_word_ids_M, train_rel_word_lens_M,train_q_word_ids_M, train_q_word_lens_M)
if iter % n_train_batches == 0:
print 'training @ iter = '+str(iter)+'\tloss_simi_i: ', loss_simi_i, 'cost_i:', cost_i
#if iter ==1:
# exit(0)
#
if iter > 59999 and iter % 10000 == 0:
test_loss=[]
succ=0
for i in range(test_size):
# print 'testing', i, '...'
#prepare data
test_rel_word_ids_M = numpy.asarray(test_relations[i], dtype='int32').reshape((length_per_example_test[i], max_relation_len))
test_rel_word_lens_M = numpy.asarray(test_relation_lengths[i], dtype='int32').reshape((length_per_example_test[i], 3))
test_q_word_ids_M = numpy.asarray(test_remainQ_word_ids[i], dtype='int32')#.reshape((length_per_example_test[i], max_Q_len))
test_q_word_lens_M = numpy.asarray(test_remainQ_word_len[i], dtype='int32')#.reshape((length_per_example_test[i], 3))
loss_simi_i,simi_list_i=test_model(test_rel_word_ids_M, test_rel_word_lens_M,test_q_word_ids_M, test_q_word_lens_M)
# print 'simi_list_i:', simi_list_i[:10]
test_loss.append(loss_simi_i)
if simi_list_i[0]>=max(simi_list_i[1:]):
succ+=1
# print 'testing', i, '...acc:', succ*1.0/(i+1)
succ=(succ+20610-test_size)*1.0/20610
#now, check MAP and MRR
print(('\t\t\t\t\t\tepoch %i, minibatch %i/%i, test accu of best '
'model %f') %
(epoch, minibatch_index, n_train_batches,succ))
if best_test_accu< succ:
best_test_accu=succ
store_model_to_file(rootPath, params, mark)
if patience <= iter:
done_looping = True
break
print 'Epoch ', epoch, 'uses ', (time.clock()-mid_time)/60.0, 'min'
mid_time = time.clock()
#print 'Batch_size: ', update_freq
end_time = time.clock()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' +
os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(learning_rate=0.008, n_epochs=2000, nkerns=[400], batch_size=1, window_width=3,
maxSentLength=30, emb_size=300, hidden_size=[300,10],
margin=0.5, L2_weight=0.0001, Div_reg=0.0001, norm_threshold=5.0, use_svm=False):
model_options = locals().copy()
print "model options", model_options
rootPath='/mounts/data/proj/wenpeng/Dataset/MicrosoftParaphrase/tokenized_msr/';
rng = numpy.random.RandomState(23455)
datasets, word2id=load_msr_corpus_20161229(rootPath+'tokenized_train.txt', rootPath+'tokenized_test.txt', maxSentLength)
vocab_size=len(word2id)+1
mtPath='/mounts/data/proj/wenpeng/Dataset/paraphraseMT/'
mt_train, mt_test=load_mts(mtPath+'concate_15mt_train.txt', mtPath+'concate_15mt_test.txt')
wm_train, wm_test=load_wmf_wikiQA(rootPath+'train_number_matching_scores.txt', rootPath+'test_number_matching_scores.txt')
indices_train, trainY, trainLengths, normalized_train_length, trainLeftPad, trainRightPad= datasets[0]
indices_train_l=indices_train[::2]
indices_train_r=indices_train[1::2]
trainLengths_l=trainLengths[::2]
trainLengths_r=trainLengths[1::2]
normalized_train_length_l=normalized_train_length[::2]
normalized_train_length_r=normalized_train_length[1::2]
trainLeftPad_l=trainLeftPad[::2]
trainLeftPad_r=trainLeftPad[1::2]
trainRightPad_l=trainRightPad[::2]
trainRightPad_r=trainRightPad[1::2]
indices_test, testY, testLengths,normalized_test_length, testLeftPad, testRightPad= datasets[1]
indices_test_l=indices_test[::2]
indices_test_r=indices_test[1::2]
testLengths_l=testLengths[::2]
testLengths_r=testLengths[1::2]
normalized_test_length_l=normalized_test_length[::2]
normalized_test_length_r=normalized_test_length[1::2]
testLeftPad_l=testLeftPad[::2]
testLeftPad_r=testLeftPad[1::2]
testRightPad_l=testRightPad[::2]
testRightPad_r=testRightPad[1::2]
train_size = len(indices_train_l)
test_size = len(indices_test_l)
train_batch_start=range(train_size)
test_batch_start=range(test_size)
# indices_train_l=theano.shared(numpy.asarray(indices_train_l, dtype=theano.config.floatX), borrow=True)
# indices_train_r=theano.shared(numpy.asarray(indices_train_r, dtype=theano.config.floatX), borrow=True)
# indices_test_l=theano.shared(numpy.asarray(indices_test_l, dtype=theano.config.floatX), borrow=True)
# indices_test_r=theano.shared(numpy.asarray(indices_test_r, dtype=theano.config.floatX), borrow=True)
# indices_train_l=T.cast(indices_train_l, 'int32')
# indices_train_r=T.cast(indices_train_r, 'int32')
# indices_test_l=T.cast(indices_test_l, 'int32')
# indices_test_r=T.cast(indices_test_r, 'int32')
rand_values=random_value_normal((vocab_size, emb_size), theano.config.floatX, rng)
# rand_values[0]=numpy.array(numpy.zeros(emb_size))
id2word = {y:x for x,y in word2id.iteritems()}
word2vec=load_word2vec()
rand_values=load_word2vec_to_init_new(rand_values, id2word, word2vec)
embeddings=theano.shared(value=numpy.array(rand_values,dtype=theano.config.floatX), borrow=True)#theano.shared(value=rand_values, borrow=True)
# allocate symbolic variables for the data
# index = T.iscalar()
x_index_l = T.imatrix() # now, x is the index matrix, must be integer
x_index_r = T.imatrix()
y = T.ivector()
left_l=T.iscalar()
right_l=T.iscalar()
left_r=T.iscalar()
right_r=T.iscalar()
length_l=T.iscalar()
length_r=T.iscalar()
norm_length_l=T.fscalar()
norm_length_r=T.fscalar()
mts=T.fmatrix()
wmf=T.fmatrix()
# cost_tmp=T.fscalar()
#x=embeddings[x_index.flatten()].reshape(((batch_size*4),maxSentLength, emb_size)).transpose(0, 2, 1).flatten()
ishape = (emb_size, maxSentLength) # this is the size of MNIST images
filter_size=(emb_size,window_width)
#poolsize1=(1, ishape[1]-filter_size[1]+1) #?????????????????????????????
length_after_wideConv=ishape[1]+filter_size[1]-1
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
# Reshape matrix of rasterized images of shape (batch_size,28*28)
# to a 4D tensor, compatible with our LeNetConvPoolLayer
#layer0_input = x.reshape(((batch_size*4), 1, ishape[0], ishape[1]))
layer0_l_input = embeddings[x_index_l.flatten()].reshape((batch_size,maxSentLength, emb_size)).dimshuffle(0, 'x', 2,1)
layer0_r_input = embeddings[x_index_r.flatten()].reshape((batch_size,maxSentLength, emb_size)).dimshuffle(0, 'x', 2,1)
conv_W, conv_b=create_conv_para(rng, filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]))
conv_W_into_matrix=conv_W.reshape((conv_W.shape[0], conv_W.shape[2]*conv_W.shape[3]))
#layer0_output = debug_print(layer0.output, 'layer0.output')
layer0_l = Conv_with_input_para(rng, input=layer0_l_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]), W=conv_W, b=conv_b)
layer0_r = Conv_with_input_para(rng, input=layer0_r_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]), W=conv_W, b=conv_b)
layer0_l_output=debug_print(layer0_l.output, 'layer0_l.output')
layer0_r_output=debug_print(layer0_r.output, 'layer0_r.output')
layer0_l_output_maxpool = T.max(layer0_l.output_narrow_conv_out[:,:,:,left_l:], axis=3).reshape((1, nkerns[0]))
layer0_r_output_maxpool = T.max(layer0_r.output_narrow_conv_out[:,:,:,left_r:], axis=3).reshape((1, nkerns[0]))
layer1=Average_Pooling_for_Top(rng, input_l=layer0_l_output, input_r=layer0_r_output, kern=nkerns[0],
left_l=left_l, right_l=right_l, left_r=left_r, right_r=right_r,
length_l=length_l+filter_size[1]-1, length_r=length_r+filter_size[1]-1,
dim=maxSentLength+filter_size[1]-1)
sum_uni_l=T.sum(layer0_l_input[:,:,:,left_l:], axis=3).reshape((1, emb_size))
norm_uni_l=sum_uni_l/T.sqrt((sum_uni_l**2).sum())
sum_uni_r=T.sum(layer0_r_input[:,:,:,left_r:], axis=3).reshape((1, emb_size))
norm_uni_r=sum_uni_r/T.sqrt((sum_uni_r**2).sum())
uni_cosine=cosine(sum_uni_l, sum_uni_r)
'''
linear=Linear(sum_uni_l, sum_uni_r)
poly=Poly(sum_uni_l, sum_uni_r)
sigmoid=Sigmoid(sum_uni_l, sum_uni_r)
rbf=RBF(sum_uni_l, sum_uni_r)
gesd=GESD(sum_uni_l, sum_uni_r)
'''
eucli_1=1.0/(1.0+EUCLID(sum_uni_l, sum_uni_r))#25.2%
#eucli_1=EUCLID(sum_uni_l, sum_uni_r)
len_l=norm_length_l.reshape((1,1))
len_r=norm_length_r.reshape((1,1))
'''
len_l=length_l.reshape((1,1))
len_r=length_r.reshape((1,1))
'''
#length_gap=T.log(1+(T.sqrt((len_l-len_r)**2))).reshape((1,1))
#length_gap=T.sqrt((len_l-len_r)**2)
#layer3_input=mts
HL_layer_1_input=T.concatenate([
# mts,
eucli_1, #uni_cosine,norm_uni_l-(norm_uni_l+norm_uni_r)/2,#uni_cosine, #
uni_cosine,
# sum_uni_l,
# sum_uni_r,
# sum_uni_l+sum_uni_r,
1.0/(1.0+EUCLID(layer0_l_output_maxpool, layer0_r_output_maxpool)),
cosine(layer0_l_output_maxpool, layer0_r_output_maxpool),
layer0_l_output_maxpool,
layer0_r_output_maxpool,
T.sqrt((layer0_l_output_maxpool-layer0_r_output_maxpool)**2+1e-10),
layer1.output_eucli_to_simi, #layer1.output_cosine,layer1.output_vector_l-(layer1.output_vector_l+layer1.output_vector_r)/2,#layer1.output_cosine, #
layer1.output_cosine,
layer1.output_vector_l,
layer1.output_vector_r,
T.sqrt((layer1.output_vector_l-layer1.output_vector_r)**2+1e-10),
# len_l, len_r
layer1.output_attentions
# wmf,
], axis=1)#, layer2.output, layer1.output_cosine], axis=1)
HL_layer_1_input_with_extra=T.concatenate([#HL_layer_1_input,
mts, len_l, len_r
# wmf
], axis=1)#, layer2.output, layer1.output_cosine], axis=1)
HL_layer_1_input_size=1+1+ 1+1+3* nkerns[0] +1+1+3*nkerns[0]+10*10
HL_layer_1_input_with_extra_size = HL_layer_1_input_size+15+2
HL_layer_1=HiddenLayer(rng, input=HL_layer_1_input, n_in=HL_layer_1_input_size, n_out=hidden_size[0], activation=T.tanh)
HL_layer_2=HiddenLayer(rng, input=HL_layer_1.output, n_in=hidden_size[0], n_out=hidden_size[1], activation=T.tanh)
LR_layer_input=T.concatenate([HL_layer_2.output, HL_layer_1.output, HL_layer_1_input],axis=1)
LR_layer_input_with_extra=T.concatenate([HL_layer_2.output, HL_layer_1_input_with_extra],axis=1)#HL_layer_1.output,
LR_layer=LogisticRegression(rng, input=LR_layer_input, n_in=HL_layer_1_input_size+hidden_size[0]+hidden_size[1], n_out=2)
# LR_layer_input=HL_layer_2.output
# LR_layer=LogisticRegression(rng, input=LR_layer_input, n_in=hidden_size, n_out=2)
# layer3=LogisticRegression(rng, input=layer3_input, n_in=15+1+1+2+3, n_out=2)
#L2_reg =(layer3.W** 2).sum()+(layer2.W** 2).sum()+(layer1.W** 2).sum()+(conv_W** 2).sum()
L2_reg =debug_print((LR_layer.W** 2).sum()+(HL_layer_2.W** 2).sum()+(HL_layer_1.W** 2).sum()+(conv_W** 2).sum(), 'L2_reg')#+(layer1.W** 2).sum()
# diversify_reg= Diversify_Reg(LR_layer.W.T)+Diversify_Reg(HL_layer_2.W.T)+Diversify_Reg(HL_layer_1.W.T)+Diversify_Reg(conv_W_into_matrix)
cost_this =debug_print(LR_layer.negative_log_likelihood(y), 'cost_this')#+L2_weight*L2_reg
cost=cost_this+L2_weight*L2_reg#+Div_reg*diversify_reg
test_model = theano.function([x_index_l,x_index_r,y,left_l, right_l, left_r, right_r, length_l, length_r, norm_length_l, norm_length_r,
mts,wmf], [LR_layer.errors(y), LR_layer.y_pred, LR_layer_input_with_extra, y], on_unused_input='ignore',allow_input_downcast=True)
params = LR_layer.params+ HL_layer_2.params+HL_layer_1.params+[conv_W, conv_b]+[embeddings]#+[embeddings]# + layer1.params
accumulator=[]
for para_i in params:
eps_p=numpy.zeros_like(para_i.get_value(borrow=True),dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
clipped_grad = T.clip(grad_i, -0.5, 0.5)
acc = acc_i + T.sqr(clipped_grad)
updates.append((param_i, param_i - learning_rate * clipped_grad / T.sqrt(acc+1e-10))) #AdaGrad
updates.append((acc_i, acc))
train_model = theano.function([x_index_l,x_index_r,y,left_l, right_l, left_r, right_r, length_l, length_r, norm_length_l, norm_length_r,
mts,wmf], [cost,LR_layer.errors(y)], updates=updates, on_unused_input='ignore',allow_input_downcast=True)
train_model_predict = theano.function([x_index_l,x_index_r,y,left_l, right_l, left_r, right_r, length_l, length_r, norm_length_l, norm_length_r,
mts,wmf], [cost_this,LR_layer.errors(y), LR_layer_input_with_extra, y],on_unused_input='ignore',allow_input_downcast=True)
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
patience_increase = 2 # wait this much longer when a new best is
# found
improvement_threshold = 0.995 # a relative improvement of this much is
best_params = None
best_validation_loss = numpy.inf
test_score = 0.
start_time = time.clock()
epoch = 0
done_looping = False
max_acc=0.0
nn_max_acc=0.0
best_iter=0
cost_tmp=0.0
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
#for minibatch_index in xrange(n_train_batches): # each batch
minibatch_index=0
shuffle(train_batch_start)#shuffle training data
for index in train_batch_start:
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * train_size + minibatch_index +1
minibatch_index=minibatch_index+1
# if iter%update_freq != 0:
# cost_ij, error_ij, layer3_input, y=train_model_predict(batch_start)
# #print 'cost_ij: ', cost_ij
# cost_tmp+=cost_ij
# error_sum+=error_ij
# else:
cost_i, error_i= train_model(indices_train_l[index: index + batch_size],
indices_train_r[index: index + batch_size],
trainY[index: index + batch_size],
trainLeftPad_l[index],
trainRightPad_l[index],
trainLeftPad_r[index],
trainRightPad_r[index],
trainLengths_l[index],
trainLengths_r[index],
normalized_train_length_l[index],
normalized_train_length_r[index],
mt_train[index: index + batch_size],
wm_train[index: index + batch_size])
cost_tmp+=cost_i
if iter < 6000 and iter %100 ==0:
print 'training @ iter = '+str(iter)+' average cost: '+str(cost_tmp/iter)
if iter >= 6000 and iter % 100 == 0:
# if iter%100 ==0:
print 'training @ iter = '+str(iter)+' average cost: '+str(cost_tmp/iter)
test_losses=[]
test_y=[]
test_features=[]
for index in test_batch_start:
test_loss, pred_y, layer3_input, y=test_model(indices_test_l[index: index + batch_size],
indices_test_r[index: index + batch_size],
testY[index: index + batch_size],
testLeftPad_l[index],
testRightPad_l[index],
testLeftPad_r[index],
testRightPad_r[index],
testLengths_l[index],
testLengths_r[index],
normalized_test_length_l[index],
normalized_test_length_r[index],
mt_test[index: index + batch_size],
wm_test[index: index + batch_size])
#test_losses = [test_model(i) for i in test_batch_start]
test_losses.append(test_loss)
test_y.append(y[0])
test_features.append(layer3_input[0])
#write_file.write(str(pred_y[0])+'\n')#+'\t'+str(testY[i].eval())+
#write_file.close()
test_score = numpy.mean(test_losses)
test_acc = (1-test_score) * 100.
if test_acc > nn_max_acc:
nn_max_acc = test_acc
print '\t\t\tepoch:', epoch, 'iter:', iter, 'current acc:', test_acc, 'nn_max_acc:', nn_max_acc
#now, see the results of svm
if use_svm:
train_y=[]
train_features=[]
for index in train_batch_start:
cost_ij, error_ij, layer3_input, y=train_model_predict(indices_train_l[index: index + batch_size],
indices_train_r[index: index + batch_size],
trainY[index: index + batch_size],
trainLeftPad_l[index],
trainRightPad_l[index],
trainLeftPad_r[index],
trainRightPad_r[index],
trainLengths_l[index],
trainLengths_r[index],
normalized_train_length_l[index],
normalized_train_length_r[index],
mt_train[index: index + batch_size],
wm_train[index: index + batch_size])
train_y.append(y[0])
train_features.append(layer3_input[0])
#write_feature.write(' '.join(map(str,layer3_input[0]))+'\n')
#write_feature.close()
clf = svm.SVC(kernel='linear')#OneVsRestClassifier(LinearSVC()) #linear 76.11%, poly 75.19, sigmoid 66.50, rbf 73.33
clf.fit(train_features, train_y)
results=clf.predict(test_features)
lr=LinearRegression().fit(train_features, train_y)
results_lr=lr.predict(test_features)
corr_count=0
corr_lr=0
test_size=len(test_y)
for i in range(test_size):
if results[i]==test_y[i]:
corr_count+=1
if numpy.absolute(results_lr[i]-test_y[i])<0.5:
corr_lr+=1
acc=corr_count*1.0/test_size
acc_lr=corr_lr*1.0/test_size
if acc > max_acc:
max_acc=acc
best_iter=iter
if acc_lr> max_acc:
max_acc=acc_lr
best_iter=iter
print '\t\t\t\tsvm acc: ', acc, 'LR acc: ', acc_lr, ' max acc: ', max_acc , ' at iter: ', best_iter
if patience <= iter:
done_looping = True
break
end_time = time.clock()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' +
os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(learning_rate=0.05, n_epochs=2000, word_nkerns=50, char_nkerns=4, batch_size=1, window_width=[2, 5],
emb_size=50, char_emb_size=4, hidden_size=200,
margin=0.5, L2_weight=0.0003, Div_reg=0.03, update_freq=1, norm_threshold=5.0, max_truncate=40,
max_char_len=40, max_des_len=20, max_relation_len=5, max_Q_len=30, train_neg_size=21,
neg_all=100, train_size=200, test_size=200, mark='_forfun'): #train_size=75909, test_size=17386
# maxSentLength=max_truncate+2*(window_width-1)
model_options = locals().copy()
print "model options", model_options
rootPath='/mounts/data/proj/wenpeng/Dataset/freebase/SimpleQuestions_v2/'
triple_files=['annotated_fb_data_train.entitylinking.top20_succSet_asInput.txt', 'annotated_fb_data_test.entitylinking.top20_succSet_asInput.txt']
rng = numpy.random.RandomState(23455)
datasets, datasets_test, length_per_example_test, vocab_size, char_size=load_train(triple_files[0], triple_files[1], max_char_len, max_des_len, max_relation_len, max_Q_len, train_size, test_size, mark)#max_char_len, max_des_len, max_relation_len, max_Q_len
print 'vocab_size:', vocab_size, 'char_size:', char_size
train_data=datasets
# valid_data=datasets[1]
test_data=datasets_test
# result=(pos_entity_char, pos_entity_des, relations, entity_char_lengths, entity_des_lengths, relation_lengths, mention_char_ids, remainQ_word_ids, mention_char_lens, remainQ_word_lens, entity_scores)
#
train_pos_entity_char=train_data[0]
train_pos_entity_des=train_data[1]
train_relations=train_data[2]
train_entity_char_lengths=train_data[3]
train_entity_des_lengths=train_data[4]
train_relation_lengths=train_data[5]
train_mention_char_ids=train_data[6]
train_remainQ_word_ids=train_data[7]
train_mention_char_lens=train_data[8]
train_remainQ_word_len=train_data[9]
train_entity_scores=train_data[10]
test_pos_entity_char=test_data[0]
test_pos_entity_des=test_data[1]
test_relations=test_data[2]
test_entity_char_lengths=test_data[3]
test_entity_des_lengths=test_data[4]
test_relation_lengths=test_data[5]
test_mention_char_ids=test_data[6]
test_remainQ_word_ids=test_data[7]
test_mention_char_lens=test_data[8]
test_remainQ_word_len=test_data[9]
test_entity_scores=test_data[10]
#
# test_pos_entity_char=test_data[0] #matrix, each row for line example, all head and tail entity, iteratively: 40*2*51
# test_pos_entity_des=test_data[1] #matrix, each row for a examle: 20*2*51
# test_relations=test_data[2] #matrix, each row for a example: 5*51
# test_entity_char_lengths=test_data[3] #matrix, each row for a example: 3*2*51 (three valies for one entity)
# test_entity_des_lengths=test_data[4] #matrix, each row for a example: 3*2*51 (three values for one entity)
# test_relation_lengths=test_data[5] #matrix, each row for a example: 3*51
# test_mention_char_ids=test_data[6] #matrix, each row for a mention: 40
# test_remainQ_word_ids=test_data[7] #matrix, each row for a question: 30
# test_mention_char_lens=test_data[8] #matrix, each three values for a mention: 3
# test_remainQ_word_len=test_data[9] #matrix, each three values for a remain question: 3
train_sizes=[len(train_pos_entity_char), len(train_pos_entity_des), len(train_relations), len(train_entity_char_lengths), len(train_entity_des_lengths),\
len(train_relation_lengths), len(train_mention_char_ids), len(train_remainQ_word_ids), len(train_mention_char_lens), len(train_remainQ_word_len), len(train_entity_scores)]
if sum(train_sizes)/len(train_sizes)!=train_size:
print 'weird size:', train_sizes
exit(0)
test_sizes=[len(test_pos_entity_char), len(test_pos_entity_des), len(test_relations), len(test_entity_char_lengths), len(test_entity_des_lengths),\
len(test_relation_lengths), len(test_mention_char_ids), len(test_remainQ_word_ids), len(test_mention_char_lens), len(test_remainQ_word_len), len(test_entity_scores)]
if sum(test_sizes)/len(test_sizes)!=test_size:
print 'weird size:', test_sizes
exit(0)
n_train_batches=train_size/batch_size
n_test_batches=test_size/batch_size
train_batch_start=list(numpy.arange(n_train_batches)*batch_size)
test_batch_start=list(numpy.arange(n_test_batches)*batch_size)
indices_train_pos_entity_char=pythonList_into_theanoIntMatrix(train_pos_entity_char)
indices_train_pos_entity_des=pythonList_into_theanoIntMatrix(train_pos_entity_des)
indices_train_relations=pythonList_into_theanoIntMatrix(train_relations)
indices_train_entity_char_lengths=pythonList_into_theanoIntMatrix(train_entity_char_lengths)
indices_train_entity_des_lengths=pythonList_into_theanoIntMatrix(train_entity_des_lengths)
indices_train_relation_lengths=pythonList_into_theanoIntMatrix(train_relation_lengths)
indices_train_mention_char_ids=pythonList_into_theanoIntMatrix(train_mention_char_ids)
indices_train_remainQ_word_ids=pythonList_into_theanoIntMatrix(train_remainQ_word_ids)
indices_train_mention_char_lens=pythonList_into_theanoIntMatrix(train_mention_char_lens)
indices_train_remainQ_word_len=pythonList_into_theanoIntMatrix(train_remainQ_word_len)
indices_train_entity_scores=pythonList_into_theanoFloatMatrix(train_entity_scores)
# indices_test_pos_entity_char=pythonList_into_theanoIntMatrix(test_pos_entity_char)
# indices_test_pos_entity_des=pythonList_into_theanoIntMatrix(test_pos_entity_des)
# indices_test_relations=pythonList_into_theanoIntMatrix(test_relations)
# indices_test_entity_char_lengths=pythonList_into_theanoIntMatrix(test_entity_char_lengths)
# indices_test_entity_des_lengths=pythonList_into_theanoIntMatrix(test_entity_des_lengths)
# indices_test_relation_lengths=pythonList_into_theanoIntMatrix(test_relation_lengths)
# indices_test_mention_char_ids=pythonList_into_theanoIntMatrix(test_mention_char_ids)
# indices_test_remainQ_word_ids=pythonList_into_theanoIntMatrix(test_remainQ_word_ids)
# indices_test_mention_char_lens=pythonList_into_theanoIntMatrix(test_mention_char_lens)
# indices_test_remainQ_word_len=pythonList_into_theanoIntMatrix(test_remainQ_word_len)
# indices_test_entity_scores=pythonList_into_theanoIntMatrix(test_entity_scores)
rand_values=random_value_normal((vocab_size+1, emb_size), theano.config.floatX, numpy.random.RandomState(1234))
rand_values[0]=numpy.array(numpy.zeros(emb_size),dtype=theano.config.floatX)
#rand_values[0]=numpy.array([1e-50]*emb_size)
rand_values=load_word2vec_to_init(rand_values, rootPath+'word_emb'+mark+'.txt')
embeddings=theano.shared(value=rand_values, borrow=True)
char_rand_values=random_value_normal((char_size+1, char_emb_size), theano.config.floatX, numpy.random.RandomState(1234))
char_rand_values[0]=numpy.array(numpy.zeros(char_emb_size),dtype=theano.config.floatX)
char_embeddings=theano.shared(value=char_rand_values, borrow=True)
# allocate symbolic variables for the data
index = T.lscalar()
chosed_indices=T.lvector()
ent_char_ids_M = T.lmatrix()
ent_lens_M = T.lmatrix()
men_char_ids_M = T.lmatrix()
men_lens_M=T.lmatrix()
rel_word_ids_M=T.lmatrix()
rel_word_lens_M=T.lmatrix()
desH_word_ids_M=T.lmatrix()
desH_word_lens_M=T.lmatrix()
# desT_word_ids_M=T.lmatrix()
# desT_word_lens_M=T.lmatrix()
q_word_ids_M=T.lmatrix()
q_word_lens_M=T.lmatrix()
ent_scores=T.dvector()
#max_char_len, max_des_len, max_relation_len, max_Q_len
# ent_men_ishape = (char_emb_size, max_char_len) # this is the size of MNIST images
# rel_ishape=(emb_size, max_relation_len)
# des_ishape=(emb_size, max_des_len)
# q_ishape=(emb_size, max_Q_len)
filter_size=(emb_size,window_width[0])
char_filter_size=(char_emb_size, window_width[1])
#poolsize1=(1, ishape[1]-filter_size[1]+1) #?????????????????????????????
# length_after_wideConv=ishape[1]+filter_size[1]-1
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
char_filter_shape=(char_nkerns, 1, char_filter_size[0], char_filter_size[1])
word_filter_shape=(word_nkerns, 1, filter_size[0], filter_size[1])
char_conv_W, char_conv_b=create_conv_para(rng, filter_shape=char_filter_shape)
q_rel_conv_W, q_rel_conv_b=create_conv_para(rng, filter_shape=word_filter_shape)
q_desH_conv_W, q_desH_conv_b=create_conv_para(rng, filter_shape=word_filter_shape)
params = [char_embeddings, embeddings, char_conv_W, char_conv_b, q_rel_conv_W, q_rel_conv_b, q_desH_conv_W, q_desH_conv_b]
char_conv_W_into_matrix=char_conv_W.reshape((char_conv_W.shape[0], char_conv_W.shape[2]*char_conv_W.shape[3]))
q_rel_conv_W_into_matrix=q_rel_conv_W.reshape((q_rel_conv_W.shape[0], q_rel_conv_W.shape[2]*q_rel_conv_W.shape[3]))
q_desH_conv_W_into_matrix=q_desH_conv_W.reshape((q_desH_conv_W.shape[0], q_desH_conv_W.shape[2]*q_desH_conv_W.shape[3]))
# load_model_from_file(rootPath, params, '')
def SimpleQ_matches_Triple(ent_char_ids_f,ent_lens_f,rel_word_ids_f,rel_word_lens_f,desH_word_ids_f,
desH_word_lens_f,
men_char_ids_f, q_word_ids_f, men_lens_f, q_word_lens_f):
# rng = numpy.random.RandomState(23455)
ent_char_input = char_embeddings[ent_char_ids_f.flatten()].reshape((batch_size,max_char_len, char_emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
men_char_input = char_embeddings[men_char_ids_f.flatten()].reshape((batch_size,max_char_len, char_emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
rel_word_input = embeddings[rel_word_ids_f.flatten()].reshape((batch_size,max_relation_len, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
desH_word_input = embeddings[desH_word_ids_f.flatten()].reshape((batch_size,max_des_len, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
# desT_word_input = embeddings[desT_word_ids_f.flatten()].reshape((batch_size,max_des_len, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
q_word_input = embeddings[q_word_ids_f.flatten()].reshape((batch_size,max_Q_len, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
#ent_mention
ent_char_conv = Conv_with_input_para(rng, input=ent_char_input,
image_shape=(batch_size, 1, char_emb_size, max_char_len),
filter_shape=char_filter_shape, W=char_conv_W, b=char_conv_b)
men_char_conv = Conv_with_input_para(rng, input=men_char_input,
image_shape=(batch_size, 1, char_emb_size, max_char_len),
filter_shape=char_filter_shape, W=char_conv_W, b=char_conv_b)
#q-rel
q_rel_conv = Conv_with_input_para(rng, input=q_word_input,
image_shape=(batch_size, 1, emb_size, max_Q_len),
filter_shape=word_filter_shape, W=q_rel_conv_W, b=q_rel_conv_b)
rel_conv = Conv_with_input_para(rng, input=rel_word_input,
image_shape=(batch_size, 1, emb_size, max_relation_len),
filter_shape=word_filter_shape, W=q_rel_conv_W, b=q_rel_conv_b)
#q_desH
q_desH_conv = Conv_with_input_para(rng, input=q_word_input,
image_shape=(batch_size, 1, emb_size, max_Q_len),
filter_shape=word_filter_shape, W=q_desH_conv_W, b=q_desH_conv_b)
desH_conv = Conv_with_input_para(rng, input=desH_word_input,
image_shape=(batch_size, 1, emb_size, max_des_len),
filter_shape=word_filter_shape, W=q_desH_conv_W, b=q_desH_conv_b)
# #q_desT
# q_desT_conv = Conv_with_input_para(rng, input=q_word_input,
# image_shape=(batch_size, 1, emb_size, max_Q_len),
# filter_shape=word_filter_shape, W=q_desT_conv_W, b=q_desT_conv_b)
# desT_conv = Conv_with_input_para(rng, input=desT_word_input,
# image_shape=(batch_size, 1, emb_size, max_des_len),
# filter_shape=word_filter_shape, W=q_desT_conv_W, b=q_desT_conv_b)
# ent_char_output=debug_print(ent_char_conv.output, 'ent_char.output')
# men_char_output=debug_print(men_char_conv.output, 'men_char.output')
ent_conv_pool=Max_Pooling(rng, input_l=ent_char_conv.output, left_l=ent_lens_f[0], right_l=ent_lens_f[2])
men_conv_pool=Max_Pooling(rng, input_l=men_char_conv.output, left_l=men_lens_f[0], right_l=men_lens_f[2])
# q_rel_pool=Max_Pooling(rng, input_l=q_rel_conv.output, left_l=q_word_lens_f[0], right_l=q_word_lens_f[2])
rel_conv_pool=Max_Pooling(rng, input_l=rel_conv.output, left_l=rel_word_lens_f[0], right_l=rel_word_lens_f[2])
q_rel_pool=Average_Pooling_for_SimpleQA(rng, input_l=q_rel_conv.output, input_r=rel_conv_pool.output_maxpooling,
left_l=q_word_lens_f[0], right_l=q_word_lens_f[2], length_l=q_word_lens_f[1]+filter_size[1]-1,
dim=max_Q_len+filter_size[1]-1, topk=2)
q_desH_pool=Max_Pooling(rng, input_l=q_desH_conv.output, left_l=q_word_lens_f[0], right_l=q_word_lens_f[2])
desH_conv_pool=Max_Pooling(rng, input_l=desH_conv.output, left_l=desH_word_lens_f[0], right_l=desH_word_lens_f[2])
# q_desT_pool=Max_Pooling(rng, input_l=q_desT_conv.output, left_l=q_word_lens[0], right_l=q_word_lens[2])
# desT_conv_pool=Max_Pooling(rng, input_l=desT_conv.output, left_l=desT_word_lens_f[0], right_l=desT_word_lens_f[2])
overall_simi=(cosine(ent_conv_pool.output_maxpooling, men_conv_pool.output_maxpooling)+\
cosine(q_rel_pool.topk_max_pooling, rel_conv_pool.output_maxpooling)+\
0.1*cosine(q_desH_pool.output_maxpooling, desH_conv_pool.output_maxpooling))/3.0
# cosine(q_desT_pool.output_maxpooling, desT_conv_pool.output_maxpooling)
return overall_simi
simi_list, updates = theano.scan(
SimpleQ_matches_Triple,
sequences=[ent_char_ids_M,ent_lens_M,rel_word_ids_M,rel_word_lens_M,desH_word_ids_M,
desH_word_lens_M,
men_char_ids_M, q_word_ids_M, men_lens_M, q_word_lens_M])
simi_list+=0.5*ent_scores
posi_simi=simi_list[0]
nega_simies=simi_list[1:]
loss_simi_list=T.maximum(0.0, margin-posi_simi.reshape((1,1))+nega_simies)
loss_simi=T.mean(loss_simi_list)
#L2_reg =(layer3.W** 2).sum()+(layer2.W** 2).sum()+(layer1.W** 2).sum()+(conv_W** 2).sum()
L2_reg =debug_print((char_embeddings** 2).sum()+(embeddings** 2).sum()+(char_conv_W** 2).sum()+(q_rel_conv_W** 2).sum()+(q_desH_conv_W** 2).sum(), 'L2_reg')#+(layer1.W** 2).sum()++(embeddings**2).sum()
diversify_reg= Diversify_Reg(char_conv_W_into_matrix)+Diversify_Reg(q_rel_conv_W_into_matrix)+Diversify_Reg(q_desH_conv_W_into_matrix)
cost=loss_simi+L2_weight*L2_reg+Div_reg*diversify_reg
#cost=debug_print((cost_this+cost_tmp)/update_freq, 'cost')
test_model = theano.function([ent_char_ids_M, ent_lens_M, men_char_ids_M, men_lens_M, rel_word_ids_M, rel_word_lens_M, desH_word_ids_M, desH_word_lens_M,
q_word_ids_M, q_word_lens_M, ent_scores], [loss_simi, simi_list],on_unused_input='ignore')
# givens={
# ent_char_ids_M : test_pos_entity_char[index].reshape((length_per_example_test[index], max_char_len)),
# ent_lens_M : test_entity_char_lengths[index].reshape((length_per_example_test[index], 3)),
# men_char_ids_M : test_mention_char_ids[index].reshape((length_per_example_test[index], max_char_len)),
# men_lens_M : test_mention_char_lens[index].reshape((length_per_example_test[index], 3)),
# rel_word_ids_M : test_relations[index].reshape((length_per_example_test[index], max_relation_len)),
# rel_word_lens_M : test_relation_lengths[index].reshape((length_per_example_test[index], 3)),
# desH_word_ids_M : test_pos_entity_des[index].reshape((length_per_example_test[index], max_des_len)),
# desH_word_lens_M : test_entity_des_lengths[index].reshape((length_per_example_test[index], 3)),
# # desT_word_ids_M : indices_train_pos_entity_des[index].reshape(((neg_all)*2, max_des_len))[1::2],
# # desT_word_lens_M : indices_train_entity_des_lengths[index].reshape(((neg_all)*2, 3))[1::2],
# q_word_ids_M : test_remainQ_word_ids[index].reshape((length_per_example_test[index], max_Q_len)),
# q_word_lens_M : test_remainQ_word_len[index].reshape((length_per_example_test[index], 3)),
# ent_scores : test_entity_scores[index]},
#params = layer3.params + layer2.params + layer1.params+ [conv_W, conv_b]
#+[embeddings]# + layer1.params
# params_conv = [conv_W, conv_b]
accumulator=[]
for para_i in params:
eps_p=numpy.zeros_like(para_i.get_value(borrow=True),dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
grad_i=debug_print(grad_i,'grad_i')
acc = acc_i + T.sqr(grad_i)
# updates.append((param_i, param_i - learning_rate * grad_i / T.sqrt(acc+1e-10))) #AdaGrad
# updates.append((acc_i, acc))
if param_i == embeddings:
updates.append((param_i, T.set_subtensor((param_i - learning_rate * grad_i / T.sqrt(acc+1e-10))[0], theano.shared(numpy.zeros(emb_size))))) #Ada
elif param_i == char_embeddings:
updates.append((param_i, T.set_subtensor((param_i - learning_rate * grad_i / T.sqrt(acc+1e-10))[0], theano.shared(numpy.zeros(char_emb_size))))) #AdaGrad
else:
updates.append((param_i, param_i - learning_rate * grad_i / T.sqrt(acc+1e-10))) #AdaGrad
updates.append((acc_i, acc))
train_model = theano.function([index, chosed_indices], [loss_simi, cost], updates=updates,
givens={
ent_char_ids_M : indices_train_pos_entity_char[index].reshape((neg_all, max_char_len))[chosed_indices].reshape((train_neg_size, max_char_len)),
ent_lens_M : indices_train_entity_char_lengths[index].reshape((neg_all, 3))[chosed_indices].reshape((train_neg_size, 3)),
men_char_ids_M : indices_train_mention_char_ids[index].reshape((neg_all, max_char_len))[chosed_indices].reshape((train_neg_size, max_char_len)),
men_lens_M : indices_train_mention_char_lens[index].reshape((neg_all, 3))[chosed_indices].reshape((train_neg_size, 3)),
rel_word_ids_M : indices_train_relations[index].reshape((neg_all, max_relation_len))[chosed_indices].reshape((train_neg_size, max_relation_len)),
rel_word_lens_M : indices_train_relation_lengths[index].reshape((neg_all, 3))[chosed_indices].reshape((train_neg_size, 3)),
desH_word_ids_M : indices_train_pos_entity_des[index].reshape((neg_all, max_des_len))[chosed_indices].reshape((train_neg_size, max_des_len)),
desH_word_lens_M : indices_train_entity_des_lengths[index].reshape((neg_all, 3))[chosed_indices].reshape((train_neg_size, 3)),
# desT_word_ids_M : indices_train_pos_entity_des[index].reshape(((neg_all)*2, max_des_len))[1::2],
# desT_word_lens_M : indices_train_entity_des_lengths[index].reshape(((neg_all)*2, 3))[1::2],
q_word_ids_M : indices_train_remainQ_word_ids[index].reshape((neg_all, max_Q_len))[chosed_indices].reshape((train_neg_size, max_Q_len)),
q_word_lens_M : indices_train_remainQ_word_len[index].reshape((neg_all, 3))[chosed_indices].reshape((train_neg_size, 3)),
ent_scores : indices_train_entity_scores[index][chosed_indices]
}, on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
patience_increase = 2 # wait this much longer when a new best is
# found
improvement_threshold = 0.995 # a relative improvement of this much is
# considered significant
validation_frequency = min(n_train_batches, patience / 2)
# go through this many
# minibatche before checking the network
# on the validation set; in this case we
# check every epoch
best_params = None
best_validation_loss = numpy.inf
best_iter = 0
test_score = 0.
start_time = time.clock()
mid_time = start_time
epoch = 0
done_looping = False
best_test_accu=0.0
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
#for minibatch_index in xrange(n_train_batches): # each batch
minibatch_index=0
for batch_start in train_batch_start:
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * n_train_batches + minibatch_index +1
minibatch_index=minibatch_index+1
#print batch_start
sample_indices=[0]+random.sample(range(1, neg_all), train_neg_size-1)
loss_simi_i, cost_i= train_model(batch_start, sample_indices)
# if batch_start%1==0:
# print batch_start, '\t loss_simi_i: ', loss_simi_i, 'cost_i:', cost_i
# store_model_to_file(rootPath, params)
if iter % n_train_batches == 0:
print 'training @ iter = '+str(iter)+'\tloss_simi_i: ', loss_simi_i, 'cost_i:', cost_i
#if iter ==1:
# exit(0)
#
if iter % n_train_batches == 0:
test_loss=[]
succ=0
for i in range(test_size):
# print 'testing', i, '...'
#prepare data
test_ent_char_ids_M= numpy.asarray(test_pos_entity_char[i], dtype='int64').reshape((length_per_example_test[i], max_char_len))
test_ent_lens_M = numpy.asarray(test_entity_char_lengths[i], dtype='int64').reshape((length_per_example_test[i], 3))
test_men_char_ids_M = numpy.asarray(test_mention_char_ids[i], dtype='int64').reshape((length_per_example_test[i], max_char_len))
test_men_lens_M = numpy.asarray(test_mention_char_lens[i], dtype='int64').reshape((length_per_example_test[i], 3))
test_rel_word_ids_M = numpy.asarray(test_relations[i], dtype='int64').reshape((length_per_example_test[i], max_relation_len))
test_rel_word_lens_M = numpy.asarray(test_relation_lengths[i], dtype='int64').reshape((length_per_example_test[i], 3))
test_desH_word_ids_M =numpy.asarray( test_pos_entity_des[i], dtype='int64').reshape((length_per_example_test[i], max_des_len))
test_desH_word_lens_M = numpy.asarray(test_entity_des_lengths[i], dtype='int64').reshape((length_per_example_test[i], 3))
test_q_word_ids_M = numpy.asarray(test_remainQ_word_ids[i], dtype='int64').reshape((length_per_example_test[i], max_Q_len))
test_q_word_lens_M = numpy.asarray(test_remainQ_word_len[i], dtype='int64').reshape((length_per_example_test[i], 3))
test_ent_scores = numpy.asarray(test_entity_scores[i], dtype=theano.config.floatX)
loss_simi_i,simi_list_i=test_model(test_ent_char_ids_M, test_ent_lens_M, test_men_char_ids_M, test_men_lens_M, test_rel_word_ids_M, test_rel_word_lens_M,
test_desH_word_ids_M, test_desH_word_lens_M, test_q_word_ids_M, test_q_word_lens_M, test_ent_scores)
# print 'simi_list_i:', simi_list_i[:10]
test_loss.append(loss_simi_i)
if simi_list_i[0]>=max(simi_list_i[1:]):
succ+=1
# print 'testing', i, '...acc:', succ*1.0/(i+1)
succ=succ*1.0/test_size
#now, check MAP and MRR
print(('\t\t\t\t\t\tepoch %i, minibatch %i/%i, test accu of best '
'model %f') %
(epoch, minibatch_index, n_train_batches,succ))
if best_test_accu< succ:
best_test_accu=succ
store_model_to_file(rootPath, params, mark)
if patience <= iter:
done_looping = True
break
print 'Epoch ', epoch, 'uses ', (time.clock()-mid_time)/60.0, 'min'
mid_time = time.clock()
#print 'Batch_size: ', update_freq
end_time = time.clock()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' +
os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(learning_rate=0.02,
n_epochs=100,
emb_size=300,
batch_size=70,
filter_size=[3, 1],
maxSentLen=70,
hidden_size=[300, 300]):
model_options = locals().copy()
print "model options", model_options
seed = 1234
np.random.seed(seed)
rng = np.random.RandomState(
seed) #random seed, control the model generates the same results
srng = T.shared_randomstreams.RandomStreams(rng.randint(seed))
"load raw data"
all_sentences_l, all_masks_l, all_sentences_r, all_masks_r, all_labels, word2id = load_SNLI_dataset(
maxlen=maxSentLen
) #minlen, include one label, at least one word in the sentence
train_sents_l = np.asarray(all_sentences_l[0], dtype='int32')
dev_sents_l = np.asarray(all_sentences_l[1], dtype='int32')
test_sents_l = np.asarray(all_sentences_l[2], dtype='int32')
train_masks_l = np.asarray(all_masks_l[0], dtype=theano.config.floatX)
dev_masks_l = np.asarray(all_masks_l[1], dtype=theano.config.floatX)
test_masks_l = np.asarray(all_masks_l[2], dtype=theano.config.floatX)
train_sents_r = np.asarray(all_sentences_r[0], dtype='int32')
dev_sents_r = np.asarray(all_sentences_r[1], dtype='int32')
test_sents_r = np.asarray(all_sentences_r[2], dtype='int32')
train_masks_r = np.asarray(all_masks_r[0], dtype=theano.config.floatX)
dev_masks_r = np.asarray(all_masks_r[1], dtype=theano.config.floatX)
test_masks_r = np.asarray(all_masks_r[2], dtype=theano.config.floatX)
train_labels_store = np.asarray(all_labels[0], dtype='int32')
dev_labels_store = np.asarray(all_labels[1], dtype='int32')
test_labels_store = np.asarray(all_labels[2], dtype='int32')
train_size = len(train_labels_store)
dev_size = len(dev_labels_store)
test_size = len(test_labels_store)
print 'train size: ', train_size, ' dev size: ', dev_size, ' test size: ', test_size
vocab_size = len(word2id) + 1
"first randomly initialize each word in the matrix 'rand_values', then load pre-trained word2vec embeddinds to initialize words, uncovered"
"words keep random initialization"
rand_values = rng.normal(
0.0, 0.01,
(vocab_size, emb_size)) #generate a matrix by Gaussian distribution
id2word = {y: x for x, y in word2id.iteritems()}
word2vec = load_word2vec()
rand_values = load_word2vec_to_init(rand_values, id2word, word2vec)
init_embeddings = theano.shared(
value=np.array(rand_values, dtype=theano.config.floatX), borrow=True
) #wrap up the python variable "rand_values" into theano variable
"now, start to build the input form of the model"
sents_ids_l = T.imatrix()
sents_mask_l = T.fmatrix()
sents_ids_r = T.imatrix()
sents_mask_r = T.fmatrix()
labels = T.ivector()
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
'Use word ids in sentences to retrieve word embeddings from matrix "init_embeddings", each sentence will be in'
'tensor2 (emb_size, sen_length), then the minibatch will be in tensor3 (batch_size, emb_size, sen_length) '
embed_input_l = init_embeddings[sents_ids_l.flatten(
)].reshape((batch_size, maxSentLen, emb_size)).dimshuffle(
0, 2, 1
) #embed_input(init_embeddings, sents_ids_l)#embeddings[sents_ids_l.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1) #the input format can be adapted into CNN or GRU or LSTM
embed_input_r = init_embeddings[sents_ids_r.flatten()].reshape(
(batch_size, maxSentLen, emb_size)).dimshuffle(0, 2, 1)
'''create parameters for attentive convolution function '''
gate_filter_shape = (emb_size, 1, emb_size, 1)
conv_W_pre, conv_b_pre = create_conv_para(rng,
filter_shape=gate_filter_shape)
conv_W_gate, conv_b_gate = create_conv_para(rng,
filter_shape=gate_filter_shape)
conv_W, conv_b = create_conv_para(rng,
filter_shape=(hidden_size[0], 1,
emb_size, filter_size[0]))
conv_W_context, conv_b_context = create_conv_para(
rng, filter_shape=(hidden_size[0], 1, emb_size, 1))
conv_W2, conv_b2 = create_conv_para(rng,
filter_shape=(hidden_size[0], 1,
emb_size,
filter_size[1]))
conv_W2_context, conv_b2_context = create_conv_para(
rng, filter_shape=(hidden_size[0], 1, emb_size, 1))
NN_para = [
conv_W, conv_b, conv_W_context, conv_W_pre, conv_b_pre, conv_W_gate,
conv_b_gate, conv_W2, conv_b2, conv_W2_context
]
"A gated convolution layer to form more expressive word representations in each sentence"
"input tensor3 (batch_size, emb_size, sen_length), output tensor3 (batch_size, emb_size, sen_length)"
conv_layer_gate_l = Conv_with_Mask_with_Gate(
rng,
input_tensor3=embed_input_l,
mask_matrix=sents_mask_l,
image_shape=(batch_size, 1, emb_size, maxSentLen),
filter_shape=gate_filter_shape,
W=conv_W_pre,
b=conv_b_pre,
W_gate=conv_W_gate,
b_gate=conv_b_gate)
conv_layer_gate_r = Conv_with_Mask_with_Gate(
rng,
input_tensor3=embed_input_r,
mask_matrix=sents_mask_r,
image_shape=(batch_size, 1, emb_size, maxSentLen),
filter_shape=gate_filter_shape,
W=conv_W_pre,
b=conv_b_pre,
W_gate=conv_W_gate,
b_gate=conv_b_gate)
'''
attentive convolution function, two sizes of filter_width 3&1 are used. Multi-channel
'''
attentive_conv_layer = Attentive_Conv_for_Pair(
rng,
origin_input_tensor3=embed_input_l,
origin_input_tensor3_r=embed_input_r,
input_tensor3=conv_layer_gate_l.output_tensor3,
input_tensor3_r=conv_layer_gate_r.output_tensor3,
mask_matrix=sents_mask_l,
mask_matrix_r=sents_mask_r,
image_shape=(batch_size, 1, emb_size, maxSentLen),
image_shape_r=(batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[0], 1, emb_size, 1),
W=conv_W,
b=conv_b,
W_context=conv_W_context,
b_context=conv_b_context)
attentive_sent_embeddings_l = attentive_conv_layer.attentive_maxpool_vec_l
attentive_sent_embeddings_r = attentive_conv_layer.attentive_maxpool_vec_r
attentive_conv_layer2 = Attentive_Conv_for_Pair(
rng,
origin_input_tensor3=embed_input_l,
origin_input_tensor3_r=embed_input_r,
input_tensor3=conv_layer_gate_l.output_tensor3,
input_tensor3_r=conv_layer_gate_r.output_tensor3,
mask_matrix=sents_mask_l,
mask_matrix_r=sents_mask_r,
image_shape=(batch_size, 1, emb_size, maxSentLen),
image_shape_r=(batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[1]),
filter_shape_context=(hidden_size[0], 1, emb_size, 1),
W=conv_W2,
b=conv_b2,
W_context=conv_W2_context,
b_context=conv_b2_context)
attentive_sent_embeddings_l2 = attentive_conv_layer2.attentive_maxpool_vec_l
attentive_sent_embeddings_r2 = attentive_conv_layer2.attentive_maxpool_vec_r
"Batch normalization for the four output sentence representation vectors"
gamma = theano.shared(np.asarray(rng.uniform(
low=-1.0 / math.sqrt(hidden_size[0]),
high=1.0 / math.sqrt(hidden_size[0]),
size=(hidden_size[0])),
dtype=theano.config.floatX),
borrow=True)
beta = theano.shared(np.zeros((hidden_size[0]),
dtype=theano.config.floatX),
borrow=True)
bn_params = [gamma, beta]
bn_attentive_sent_embeddings_l = batch_normalization(
inputs=attentive_sent_embeddings_l,
gamma=gamma,
beta=beta,
mean=attentive_sent_embeddings_l.mean((0, ), keepdims=True),
std=attentive_sent_embeddings_l.std((0, ), keepdims=True),
mode='low_mem')
bn_attentive_sent_embeddings_r = batch_normalization(
inputs=attentive_sent_embeddings_r,
gamma=gamma,
beta=beta,
mean=attentive_sent_embeddings_r.mean((0, ), keepdims=True),
std=attentive_sent_embeddings_r.std((0, ), keepdims=True),
mode='low_mem')
bn_attentive_sent_embeddings_l2 = batch_normalization(
inputs=attentive_sent_embeddings_l2,
gamma=gamma,
beta=beta,
mean=attentive_sent_embeddings_l2.mean((0, ), keepdims=True),
std=attentive_sent_embeddings_l2.std((0, ), keepdims=True),
mode='low_mem')
bn_attentive_sent_embeddings_r2 = batch_normalization(
inputs=attentive_sent_embeddings_r2,
gamma=gamma,
beta=beta,
mean=attentive_sent_embeddings_r2.mean((0, ), keepdims=True),
std=attentive_sent_embeddings_r2.std((0, ), keepdims=True),
mode='low_mem')
"Before logistic regression layer, we insert a hidden layer. Now form input to HL classifier"
HL_layer_1_input = T.concatenate([
bn_attentive_sent_embeddings_l, bn_attentive_sent_embeddings_r,
bn_attentive_sent_embeddings_l + bn_attentive_sent_embeddings_r,
bn_attentive_sent_embeddings_l * bn_attentive_sent_embeddings_r,
bn_attentive_sent_embeddings_l2, bn_attentive_sent_embeddings_r2,
bn_attentive_sent_embeddings_l2 + bn_attentive_sent_embeddings_r2,
bn_attentive_sent_embeddings_l2 * bn_attentive_sent_embeddings_r2
],
axis=1)
HL_layer_1_input_size = 8 * hidden_size[0]
"Create hidden layer parameters"
HL_layer_1_W, HL_layer_1_b = create_HiddenLayer_para(
rng, HL_layer_1_input_size, hidden_size[1])
HL_layer_1_params = [HL_layer_1_W, HL_layer_1_b]
"Hidden Layer and batch norm to its output again"
HL_layer_1 = HiddenLayer(rng,
input=HL_layer_1_input,
n_in=HL_layer_1_input_size,
n_out=hidden_size[1],
W=HL_layer_1_W,
b=HL_layer_1_b,
activation=T.tanh)
gamma_HL = theano.shared(np.asarray(rng.uniform(
low=-1.0 / math.sqrt(hidden_size[1]),
high=1.0 / math.sqrt(hidden_size[1]),
size=(hidden_size[1])),
dtype=theano.config.floatX),
borrow=True)
beta_HL = theano.shared(np.zeros((hidden_size[1]),
dtype=theano.config.floatX),
borrow=True)
bn_params_HL = [gamma_HL, beta_HL]
bn_HL_output = batch_normalization(inputs=HL_layer_1.output,
gamma=gamma_HL,
beta=beta_HL,
mean=HL_layer_1.output.mean(
(0, ), keepdims=True),
std=HL_layer_1.output.std(
(0, ), keepdims=True),
mode='low_mem')
"Form input to LR classifier"
LR_input = T.concatenate([HL_layer_1_input, bn_HL_output], axis=1)
LR_input_size = HL_layer_1_input_size + hidden_size[1]
U_a = create_ensemble_para(rng, 3, LR_input_size) # (input_size, 3)
LR_b = theano.shared(value=np.zeros((3, ), dtype=theano.config.floatX),
name='LR_b',
borrow=True) #bias for each target class
LR_para = [U_a, LR_b]
"Logistic Regression layer"
layer_LR = LogisticRegression(
rng,
input=normalize_matrix_col_wise(LR_input),
n_in=LR_input_size,
n_out=3,
W=U_a,
b=LR_b
) #basically it is a multiplication between weight matrix and input feature vector
loss = layer_LR.negative_log_likelihood(
labels
) #for classification task, we usually used negative log likelihood as loss, the lower the better.
params = [
init_embeddings
] + NN_para + LR_para + bn_params + HL_layer_1_params + bn_params_HL
cost = loss
"Use AdaGrad to update parameters"
updates = Gradient_Cost_Para(cost, params, learning_rate)
train_model = theano.function(
[sents_ids_l, sents_mask_l, sents_ids_r, sents_mask_r, labels],
cost,
updates=updates,
allow_input_downcast=True,
on_unused_input='ignore')
dev_model = theano.function(
[sents_ids_l, sents_mask_l, sents_ids_r, sents_mask_r, labels],
layer_LR.errors(labels),
allow_input_downcast=True,
on_unused_input='ignore')
test_model = theano.function(
[sents_ids_l, sents_mask_l, sents_ids_r, sents_mask_r, labels],
layer_LR.errors(labels),
allow_input_downcast=True,
on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 50000000000 # look as this many examples regardless
start_time = time.time()
mid_time = start_time
past_time = mid_time
epoch = 0
done_looping = False
n_train_batches = train_size / batch_size
train_batch_start = list(
np.arange(n_train_batches) * batch_size) + [train_size - batch_size]
n_dev_batches = dev_size / batch_size
dev_batch_start = list(
np.arange(n_dev_batches) * batch_size) + [dev_size - batch_size]
n_test_batches = test_size / batch_size
test_batch_start = list(
np.arange(n_test_batches) * batch_size) + [test_size - batch_size]
max_acc_dev = 0.0
max_acc_test = 0.0
cost_i = 0.0
train_indices = range(train_size)
while epoch < n_epochs:
epoch = epoch + 1
random.Random(100).shuffle(
train_indices
) #shuffle training set for each new epoch, is supposed to promote performance, but not garrenteed
iter_accu = 0
for batch_id in train_batch_start: #for each batch
# iter means how many batches have been run, taking into loop
iter = (epoch - 1) * n_train_batches + iter_accu + 1
iter_accu += 1
train_id_batch = train_indices[batch_id:batch_id + batch_size]
cost_i += train_model(train_sents_l[train_id_batch],
train_masks_l[train_id_batch],
train_sents_r[train_id_batch],
train_masks_r[train_id_batch],
train_labels_store[train_id_batch])
if (epoch == 1 and iter % 1000 == 0) or (epoch >= 2
and iter % 5 == 0):
print 'Epoch ', epoch, 'iter ' + str(
iter) + ' average cost: ' + str(cost_i / iter), 'uses ', (
time.time() - past_time) / 60.0, 'min'
past_time = time.time()
dev_error_sum = 0.0
for dev_batch_id in dev_batch_start: # for each test batch
dev_error_i = dev_model(
dev_sents_l[dev_batch_id:dev_batch_id + batch_size],
dev_masks_l[dev_batch_id:dev_batch_id + batch_size],
dev_sents_r[dev_batch_id:dev_batch_id + batch_size],
dev_masks_r[dev_batch_id:dev_batch_id + batch_size],
dev_labels_store[dev_batch_id:dev_batch_id +
batch_size])
dev_error_sum += dev_error_i
dev_acc = 1.0 - dev_error_sum / (len(dev_batch_start))
if dev_acc > max_acc_dev:
max_acc_dev = dev_acc
print '\tcurrent dev_acc:', dev_acc, ' ; ', '\tmax_dev_acc:', max_acc_dev
'''
best dev model, test
'''
error_sum = 0.0
for test_batch_id in test_batch_start: # for each test batch
error_i = test_model(
test_sents_l[test_batch_id:test_batch_id +
batch_size],
test_masks_l[test_batch_id:test_batch_id +
batch_size],
test_sents_r[test_batch_id:test_batch_id +
batch_size],
test_masks_r[test_batch_id:test_batch_id +
batch_size],
test_labels_store[test_batch_id:test_batch_id +
batch_size])
error_sum += error_i
test_acc = 1.0 - error_sum / (len(test_batch_start))
if test_acc > max_acc_test:
max_acc_test = test_acc
print '\t\tcurrent test_acc:', test_acc, ' ; ', '\t\t\t\t\tmax_test_acc:', max_acc_test
else:
print '\tcurrent dev_acc:', dev_acc, ' ; ', '\tmax_dev_acc:', max_acc_dev
print 'Epoch ', epoch, 'uses ', (time.time() - mid_time) / 60.0, 'min'
mid_time = time.time()
#print 'Batch_size: ', update_freq
end_time = time.time()
print >> sys.stderr, ('The code for file ' + os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
return max_acc_test
def evaluate_lenet5(learning_rate=0.02,
n_epochs=100,
emb_size=300,
batch_size=50,
filter_size=[3],
sent_len=40,
claim_len=40,
cand_size=10,
hidden_size=[300, 300],
max_pred_pick=5):
model_options = locals().copy()
print "model options", model_options
pred_id2label = {1: 'SUPPORTS', 0: 'REFUTES', 2: 'NOT ENOUGH INFO'}
root = '/save/wenpeng/datasets/FEVER/'
seed = 1234
np.random.seed(seed)
rng = np.random.RandomState(
seed) #random seed, control the model generates the same results
srng = T.shared_randomstreams.RandomStreams(rng.randint(seed))
"load raw data"
vocabfile = codecs.open(root + 'word2id.txt', 'r', 'utf-8')
word2id = json.loads(vocabfile.read())
# co=0
# for line in vocabfile:
# word2id = json.loads(line)
# co+=1
# print 'co: ', co
# word2id = json.load(open(root+'word2id.json')) #json.loads(vocabfile)
vocabfile.close()
print 'load word2id over'
# train_sents, train_sent_masks, train_sent_labels, train_claims, train_claim_mask, train_labels, word2id = load_fever_train(sent_len, claim_len, cand_size)
# train_3th_sents, train_3th_sent_masks, train_3th_sent_labels, train_3th_claims, train_3th_claim_mask, train_3th_labels, word2id = load_fever_train_NoEnoughInfo(sent_len, claim_len, cand_size, word2id)
all_sentences_l, all_masks_l, all_sentences_r, all_masks_r, all_labels, _ = load_SciTailV1_dataset(
sent_len, word2id)
# all_sentences_l, all_masks_l, all_sentences_r, all_masks_r, all_labels, _ = load_RTE_dataset_as_test(sent_len, word2id)
# dev_sents_l=np.asarray(all_sentences_l[1], dtype='int32')
test_sents_l = np.asarray(all_sentences_l[2], dtype='int32')
# dev_masks_l=np.asarray(all_masks_l[1], dtype=theano.config.floatX)
test_masks_l = np.asarray(all_masks_l[2], dtype=theano.config.floatX)
# dev_sents_r=np.asarray(all_sentences_r[1] , dtype='int32')
test_sents_r = np.asarray(all_sentences_r[2], dtype='int32')
# dev_masks_r=np.asarray(all_masks_r[1], dtype=theano.config.floatX)
test_masks_r = np.asarray(all_masks_r[2], dtype=theano.config.floatX)
# dev_labels_store=np.asarray(all_labels[1], dtype='int32')
test_labels_store = np.asarray(all_labels[2], dtype='int32')
# dev_size=len(dev_labels_store)
test_size = len(test_labels_store)
vocab_size = len(word2id) + 1
print 'vocab size: ', vocab_size
rand_values = rng.normal(
0.0, 0.01,
(vocab_size, emb_size)) #generate a matrix by Gaussian distribution
# id2word = {y:x for x,y in word2id.iteritems()}
# word2vec=load_word2vec()
# rand_values=load_word2vec_to_init(rand_values, id2word, word2vec)
init_embeddings = theano.shared(
value=np.array(rand_values, dtype=theano.config.floatX), borrow=True
) #wrap up the python variable "rand_values" into theano variable
"now, start to build the input form of the model"
sents_ids = T.imatrix() #(batch, cand_size, sent_len)
sents_mask = T.fmatrix()
# sents_labels=T.imatrix() #(batch, cand_size)
# claim_ids = T.imatrix() #(batch, claim_len)
# claim_mask = T.fmatrix()
# joint_sents_ids=T.itensor3() #(batch, cand_size, sent_len)
# joint_sents_mask=T.ftensor3()
# joint_sents_labels=T.imatrix() #(batch, cand_size)
claim_ids = T.imatrix() #(batch, claim_len)
claim_mask = T.fmatrix()
labels = T.ivector()
# test_premise_ids = T.imatrix()
# test_premise_matrix = T.fmatrix()
# test_hypo_ids = T.imatrix()
# test_hypo_matrix = T.fmatrix()
# test_scitail_minibatch_labels = T.ivector()
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
embed_input_sents = init_embeddings[sents_ids.flatten(
)].reshape((batch_size, sent_len, emb_size)).dimshuffle(
0, 2, 1
) #embed_input(init_embeddings, sents_ids_l)#embeddings[sents_ids_l.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1) #the input format can be adapted into CNN or GRU or LSTM
embed_input_claim = init_embeddings[claim_ids.flatten()].reshape(
(batch_size, sent_len, emb_size)).dimshuffle(0, 2, 1)
conv_W, conv_b = create_conv_para(rng,
filter_shape=(hidden_size[0], 1,
emb_size, filter_size[0]))
# task1_att_conv_W, task1_att_conv_b=create_conv_para(rng, filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]))
# task1_conv_W_context, task1_conv_b_context=create_conv_para(rng, filter_shape=(hidden_size[0], 1, emb_size, 1))
att_conv_W, att_conv_b = create_conv_para(rng,
filter_shape=(hidden_size[0], 1,
emb_size,
filter_size[0]))
conv_W_context, conv_b_context = create_conv_para(
rng, filter_shape=(hidden_size[0], 1, emb_size, 1))
NN_para = [
conv_W, conv_b, att_conv_W, att_conv_b, conv_W_context, conv_b_context
]
'''
training task2, predict 3 labels
'''
joint_embed_input_sents = init_embeddings[sents_ids.flatten(
)].reshape((batch_size, sent_len, emb_size)).dimshuffle(
0, 2, 1
) #embed_input(init_embeddings, sents_ids_l)#embeddings[sents_ids_l.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1) #the input format can be adapted into CNN or GRU or LSTM
joint_embed_input_claim = init_embeddings[claim_ids.flatten()].reshape(
(batch_size, sent_len, emb_size)).dimshuffle(0, 2, 1)
joint_conv_model_sents = Conv_with_Mask(
rng,
input_tensor3=joint_embed_input_sents,
mask_matrix=sents_mask,
image_shape=(batch_size, 1, emb_size, sent_len),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
W=conv_W,
b=conv_b
) #mutiple mask with the conv_out to set the features by UNK to zero
joint_premise_emb = joint_conv_model_sents.maxpool_vec #(batch_size*cand_size, hidden_size) # each sentence then have an embedding of length hidden_size
# joint_batch_sent_emb = joint_sent_embeddings.reshape((batch_size, cand_size, hidden_size[0]))
# joint_premise_emb = T.sum(joint_batch_sent_emb*joint_sents_labels.dimshuffle(0,1,'x'), axis=1) #(batch, hidden_size)
joint_conv_model_claims = Conv_with_Mask(
rng,
input_tensor3=joint_embed_input_claim,
mask_matrix=claim_mask,
image_shape=(batch_size, 1, emb_size, claim_len),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
W=conv_W,
b=conv_b
) #mutiple mask with the conv_out to set the features by UNK to zero
joint_claim_embeddings = joint_conv_model_claims.maxpool_vec #(batch_size, hidden_size) # each sentence then have an embedding of length hidden_size
joint_premise_hypo_emb = T.concatenate(
[joint_premise_emb, joint_claim_embeddings],
axis=1) #(batch, 2*hidden_size)
'''
attentive conv in task2
'''
# joint_sents_tensor3 = joint_embed_input_sents.dimshuffle(0,2,1).reshape((batch_size, cand_size*sent_len, emb_size))
# joint_sents_dot = T.batched_dot(joint_sents_tensor3, joint_sents_tensor3.dimshuffle(0,2,1)) #(batch_size, cand_size*sent_len, cand_size*sent_len)
# joint_sents_dot_2_matrix = T.nnet.softmax(joint_sents_dot.reshape((batch_size*cand_size*sent_len, cand_size*sent_len)))
# joint_sents_context = T.batched_dot(joint_sents_dot_2_matrix.reshape((batch_size, cand_size*sent_len, cand_size*sent_len)), joint_sents_tensor3) #(batch_size, cand_size*sent_len, emb_size)
# joint_add_sents_context = joint_embed_input_sents+joint_sents_context.reshape((batch_size*cand_size, sent_len, emb_size)).dimshuffle(0,2,1)#T.concatenate([joint_embed_input_sents, joint_sents_context.reshape((batch_size*cand_size, sent_len, emb_size)).dimshuffle(0,2,1)], axis=1) #(batch_size*cand_size, 2*emb_size, sent_len)
attentive_conv_layer = Attentive_Conv_for_Pair_easy_version(
rng,
input_tensor3=
joint_embed_input_sents, #batch_size*cand_size, 2*emb_size, sent_len
input_tensor3_r=joint_embed_input_claim,
mask_matrix=sents_mask,
mask_matrix_r=claim_mask,
image_shape=(batch_size, 1, emb_size, sent_len),
image_shape_r=(batch_size, 1, emb_size, sent_len),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[0], 1, emb_size, 1),
W=att_conv_W,
b=att_conv_b,
W_context=conv_W_context,
b_context=conv_b_context)
attentive_sent_embeddings_l = attentive_conv_layer.attentive_maxpool_vec_l #(batch_size*cand_size, hidden_size)
attentive_sent_embeddings_r = attentive_conv_layer.attentive_maxpool_vec_r
"Logistic Regression layer"
joint_LR_input = T.concatenate([
joint_premise_hypo_emb, attentive_sent_embeddings_l,
attentive_sent_embeddings_r
],
axis=1)
joint_LR_input_size = 2 * hidden_size[0] + 2 * hidden_size[0]
joint_U_a = create_ensemble_para(rng, 3,
joint_LR_input_size) # (input_size, 3)
joint_LR_b = theano.shared(value=np.zeros((3, ),
dtype=theano.config.floatX),
name='LR_b',
borrow=True) #bias for each target class
joint_LR_para = [joint_U_a, joint_LR_b]
joint_layer_LR = LogisticRegression(
rng,
input=joint_LR_input,
n_in=joint_LR_input_size,
n_out=3,
W=joint_U_a,
b=joint_LR_b
) #basically it is a multiplication between weight matrix and input feature vector
# joint_loss=joint_layer_LR.negative_log_likelihood(joint_labels) #for classification task, we usually used negative log likelihood as loss, the lower the better.
'''
testing
joint_sents_ids=T.itensor3() #(batch, cand_size, sent_len)
joint_sents_mask=T.ftensor3()
joint_sents_labels=T.imatrix() #(batch, cand_size)
joint_claim_ids = T.imatrix() #(batch, claim_len)
joint_claim_mask = T.fmatrix()
joint_labels=T.ivector()
'''
pred_minibatch_labels = joint_layer_LR.y_pred
pred_minibatch_labels_2_2classes = T.where(pred_minibatch_labels > 1, 0,
pred_minibatch_labels)
pred_minibatch_error = T.mean(
T.neq(pred_minibatch_labels_2_2classes, labels))
params = [init_embeddings] + NN_para + joint_LR_para
load_model_from_file(root + 'para_for_test_scitail', params)
# train_model = theano.function([sents_ids,sents_mask,sents_labels,claim_ids,claim_mask,joint_sents_ids,joint_sents_mask,joint_sents_labels, joint_claim_ids, joint_claim_mask, joint_labels], cost, updates=updates, allow_input_downcast=True, on_unused_input='ignore')
test_model = theano.function(
[sents_ids, sents_mask, claim_ids, claim_mask, labels],
pred_minibatch_error,
allow_input_downcast=True,
on_unused_input='ignore')
# dev_model = theano.function([joint_sents_ids,joint_sents_mask,joint_sents_labels, joint_claim_ids, joint_claim_mask, joint_labels], pred_minibatch_error, allow_input_downcast=True, on_unused_input='ignore')
# test_model = theano.function([sents_ids,sents_mask,sents_labels, claim_ids,claim_mask, joint_labels], [inter_matrix,test_layer_LR.errors(joint_labels), test_layer_LR.y_pred], allow_input_downcast=True, on_unused_input='ignore')
# dev_model = theano.function([sents_ids,sents_mask,sents_labels, claim_ids,claim_mask, joint_labels], [inter_matrix,test_layer_LR.errors(joint_labels), test_layer_LR.y_pred], allow_input_downcast=True, on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... testing'
# early-stopping parameters
patience = 50000000000 # look as this many examples regardless
start_time = time.time()
mid_time = start_time
past_time = mid_time
epoch = 0
done_looping = False
# joint_n_train_batches=joint_train_size/batch_size
# joint_train_batch_start=list(np.arange(joint_n_train_batches)*batch_size)+[joint_train_size-batch_size]
# n_train_batches=train_size/batch_size
# train_batch_start=list(np.arange(n_train_batches)*batch_size)+[train_size-batch_size]
# n_dev_batches=dev_size/batch_size
# dev_batch_start=list(np.arange(n_dev_batches)*batch_size)+[dev_size-batch_size]
n_test_batches = test_size / batch_size
remain_test_batches = test_size % batch_size
test_batch_start = list(
np.arange(n_test_batches) * batch_size) + [test_size - batch_size]
max_acc_dev = 0.0
max_acc_test = 0.0
cost_i = 0.0
error_sum = 0.0
for idd, test_batch_id in enumerate(
test_batch_start): # for each test batch
error_i = test_model(
test_sents_l[test_batch_id:test_batch_id + batch_size],
test_masks_l[test_batch_id:test_batch_id + batch_size],
test_sents_r[test_batch_id:test_batch_id + batch_size],
test_masks_r[test_batch_id:test_batch_id + batch_size],
test_labels_store[test_batch_id:test_batch_id + batch_size])
error_sum += error_i
test_acc = 1.0 - error_sum / (len(test_batch_start))
print '\tcurrent test_acc:', test_acc
def evaluate_lenet5(learning_rate=0.02,
n_epochs=100,
emb_size=300,
batch_size=10,
filter_size=[3, 5],
maxSentLen=40,
hidden_size=[300, 300]):
model_options = locals().copy()
print "model options", model_options
seed = 1234
np.random.seed(seed)
rng = np.random.RandomState(
seed) #random seed, control the model generates the same results
srng = T.shared_randomstreams.RandomStreams(rng.randint(seed))
all_sentences, all_masks, all_labels, word2id = load_BBN_multi_labels_dataset(
maxlen=maxSentLen
) #minlen, include one label, at least one word in the sentence
train_sents = np.asarray(all_sentences[0], dtype='int32')
train_masks = np.asarray(all_masks[0], dtype=theano.config.floatX)
train_labels = np.asarray(all_labels[0], dtype='int32')
train_size = len(train_labels)
dev_sents = np.asarray(all_sentences[1], dtype='int32')
dev_masks = np.asarray(all_masks[1], dtype=theano.config.floatX)
dev_labels = np.asarray(all_labels[1], dtype='int32')
dev_size = len(dev_labels)
test_sents = np.asarray(all_sentences[2], dtype='int32')
test_masks = np.asarray(all_masks[2], dtype=theano.config.floatX)
test_labels = np.asarray(all_labels[2], dtype='int32')
test_size = len(test_labels)
vocab_size = len(word2id) + 1 # add one zero pad index
rand_values = rng.normal(
0.0, 0.01,
(vocab_size, emb_size)) #generate a matrix by Gaussian distribution
rand_values[0] = np.array(np.zeros(emb_size), dtype=theano.config.floatX)
id2word = {y: x for x, y in word2id.iteritems()}
word2vec = load_word2vec()
rand_values = load_word2vec_to_init(rand_values, id2word, word2vec)
embeddings = theano.shared(
value=np.array(rand_values, dtype=theano.config.floatX), borrow=True
) #wrap up the python variable "rand_values" into theano variable
#now, start to build the input form of the model
sents_id_matrix = T.imatrix('sents_id_matrix')
sents_mask = T.fmatrix('sents_mask')
labels = T.imatrix('labels') #batch*12
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
common_input = embeddings[sents_id_matrix.flatten()].reshape(
(batch_size, maxSentLen, emb_size)).dimshuffle(
0, 2, 1) #the input format can be adapted into CNN or GRU or LSTM
conv_W, conv_b = create_conv_para(rng,
filter_shape=(hidden_size[0], 1,
emb_size, filter_size[0]))
conv_W2, conv_b2 = create_conv_para(rng,
filter_shape=(hidden_size[0], 1,
emb_size,
filter_size[1]))
NN_para = [conv_W, conv_b, conv_W2, conv_b2]
conv_model = Conv_with_Mask(
rng,
input_tensor3=common_input,
mask_matrix=sents_mask,
image_shape=(batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
W=conv_W,
b=conv_b
) #mutiple mask with the conv_out to set the features by UNK to zero
sent_embeddings = conv_model.maxpool_vec #(batch_size, hidden_size) # each sentence then have an embedding of length hidden_size
conv_model2 = Conv_with_Mask(
rng,
input_tensor3=common_input,
mask_matrix=sents_mask,
image_shape=(batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[1]),
W=conv_W2,
b=conv_b2
) #mutiple mask with the conv_out to set the features by UNK to zero
sent_embeddings2 = conv_model2.maxpool_vec #(batch_size, hidden_size) # each sentence then have an embedding of length hidden_size
LR_input = T.concatenate([sent_embeddings, sent_embeddings2], axis=1)
LR_input_size = hidden_size[0] * 2
#classification layer, it is just mapping from a feature vector of size "hidden_size" to a vector of only two values: positive, negative
U_a = create_ensemble_para(
rng, 12, LR_input_size) # the weight matrix hidden_size*2
LR_b = theano.shared(value=np.zeros((12, ), dtype=theano.config.floatX),
name='LR_b',
borrow=True) #bias for each target class
LR_para = [U_a, LR_b]
layer_LR = LogisticRegression(
rng, input=LR_input, n_in=LR_input_size, n_out=12, W=U_a, b=LR_b
) #basically it is a multiplication between weight matrix and input feature vector
score_matrix = T.nnet.sigmoid(layer_LR.before_softmax) #batch * 12
prob_pos = T.where(labels < 1, 1.0 - score_matrix, score_matrix)
loss = -T.mean(T.log(prob_pos))
# loss=layer_LR.negative_log_likelihood(labels) #for classification task, we usually used negative log likelihood as loss, the lower the better.
params = [embeddings
] + NN_para + LR_para # put all model parameters together
cost = loss #+Div_reg*diversify_reg#+L2_weight*L2_reg
updates = Gradient_Cost_Para(cost, params, learning_rate)
'''
testing
'''
binarize_prob = T.where(score_matrix > 0.5, 1, 0)
#train_model = theano.function([sents_id_matrix, sents_mask, labels], cost, updates=updates, on_unused_input='ignore')
train_model = theano.function([sents_id_matrix, sents_mask, labels],
cost,
updates=updates,
allow_input_downcast=True,
on_unused_input='ignore')
# dev_model = theano.function([sents_id_matrix, sents_mask, labels], layer_LR.errors(labels), allow_input_downcast=True, on_unused_input='ignore')
test_model = theano.function([sents_id_matrix, sents_mask],
binarize_prob,
allow_input_downcast=True,
on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 50000000000 # look as this many examples regardless
start_time = time.time()
mid_time = start_time
past_time = mid_time
epoch = 0
done_looping = False
n_train_batches = train_size / batch_size
train_batch_start = list(
np.arange(n_train_batches) * batch_size) + [train_size - batch_size]
# n_dev_batches=dev_size/batch_size
# dev_batch_start=list(np.arange(n_dev_batches)*batch_size)+[dev_size-batch_size]
n_test_batches = test_size / batch_size
test_batch_start = list(
np.arange(n_test_batches) * batch_size) + [test_size - batch_size]
# max_acc_dev=0.0
max_meanf1_test = 0.0
max_weightf1_test = 0.0
train_indices = range(train_size)
while epoch < n_epochs:
epoch = epoch + 1
random.Random(100).shuffle(train_indices)
iter_accu = 0
cost_i = 0.0
for batch_id in train_batch_start: #for each batch
# iter means how many batches have been run, taking into loop
iter = (epoch - 1) * n_train_batches + iter_accu + 1
iter_accu += 1
train_id_batch = train_indices[batch_id:batch_id + batch_size]
cost_i += train_model(train_sents[train_id_batch],
train_masks[train_id_batch],
train_labels[train_id_batch])
#after each 1000 batches, we test the performance of the model on all test data
if iter % 20 == 0:
print 'Epoch ', epoch, 'iter ' + str(
iter) + ' average cost: ' + str(cost_i / iter), 'uses ', (
time.time() - past_time) / 60.0, 'min'
past_time = time.time()
error_sum = 0.0
all_pred_labels = []
all_gold_labels = []
for test_batch_id in test_batch_start: # for each test batch
pred_labels = test_model(
test_sents[test_batch_id:test_batch_id + batch_size],
test_masks[test_batch_id:test_batch_id + batch_size])
gold_labels = test_labels[test_batch_id:test_batch_id +
batch_size]
all_pred_labels.append(pred_labels)
all_gold_labels.append(gold_labels)
all_pred_labels = np.concatenate(all_pred_labels)
all_gold_labels = np.concatenate(all_gold_labels)
test_mean_f1, test_weight_f1 = average_f1_two_array_by_col(
all_pred_labels, all_gold_labels)
if test_weight_f1 > max_weightf1_test:
max_weightf1_test = test_weight_f1
if test_mean_f1 > max_meanf1_test:
max_meanf1_test = test_mean_f1
print '\t\t\t\t\t\t\t\tcurrent f1s:', test_mean_f1, test_weight_f1, '\t\tmax_f1:', max_meanf1_test, max_weightf1_test
print 'Epoch ', epoch, 'uses ', (time.time() - mid_time) / 60.0, 'min'
mid_time = time.time()
#print 'Batch_size: ', update_freq
end_time = time.time()
print >> sys.stderr, ('The code for file ' + os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
return max_acc_test
def evaluate_lenet5(learning_rate=0.08, n_epochs=2000, nkerns=[44], batch_size=1, window_width=3,
maxSentLength=64, emb_size=300, hidden_size=200,
margin=0.5, L2_weight=0.0006, update_freq=1, norm_threshold=5.0, max_truncate=24):
maxSentLength=max_truncate+2*(window_width-1)
model_options = locals().copy()
print "model options", model_options
rootPath='/mounts/data/proj/wenpeng/Dataset/SICK/';
rng = numpy.random.RandomState(23455)
datasets, vocab_size=load_SICK_corpus(rootPath+'vocab_nonoverlap.txt', rootPath+'train_removed_overlap_as_training.txt', rootPath+'test_removed_overlap_as_training.txt', max_truncate,maxSentLength, entailment=True)#vocab_size contain train, dev and test
#datasets, vocab_size=load_wikiQA_corpus(rootPath+'vocab_lower_in_word2vec.txt', rootPath+'WikiQA-train.txt', rootPath+'test_filtered.txt', maxSentLength)#vocab_size contain train, dev and test
#mtPath='/mounts/data/proj/wenpeng/Dataset/WikiQACorpus/MT/BLEU_NIST/'
mt_train, mt_test=load_mts_wikiQA(rootPath+'Train_MT/concate_14mt_train.txt', rootPath+'Test_MT/concate_14mt_test.txt')
extra_train, extra_test=load_extra_features(rootPath+'train_rule_features_cosine_eucli_negation_len1_len2.txt', rootPath+'test_rule_features_cosine_eucli_negation_len1_len2.txt')
discri_train, discri_test=load_extra_features(rootPath+'train_discri_features_0.3.txt', rootPath+'test_discri_features_0.3.txt')
#wm_train, wm_test=load_wmf_wikiQA(rootPath+'train_word_matching_scores.txt', rootPath+'test_word_matching_scores.txt')
#wm_train, wm_test=load_wmf_wikiQA(rootPath+'train_word_matching_scores_normalized.txt', rootPath+'test_word_matching_scores_normalized.txt')
indices_train, trainY, trainLengths, normalized_train_length, trainLeftPad, trainRightPad= datasets[0]
indices_train_l=indices_train[::2,:]
indices_train_r=indices_train[1::2,:]
trainLengths_l=trainLengths[::2]
trainLengths_r=trainLengths[1::2]
normalized_train_length_l=normalized_train_length[::2]
normalized_train_length_r=normalized_train_length[1::2]
trainLeftPad_l=trainLeftPad[::2]
trainLeftPad_r=trainLeftPad[1::2]
trainRightPad_l=trainRightPad[::2]
trainRightPad_r=trainRightPad[1::2]
indices_test, testY, testLengths,normalized_test_length, testLeftPad, testRightPad= datasets[1]
indices_test_l=indices_test[::2,:]
indices_test_r=indices_test[1::2,:]
testLengths_l=testLengths[::2]
testLengths_r=testLengths[1::2]
normalized_test_length_l=normalized_test_length[::2]
normalized_test_length_r=normalized_test_length[1::2]
testLeftPad_l=testLeftPad[::2]
testLeftPad_r=testLeftPad[1::2]
testRightPad_l=testRightPad[::2]
testRightPad_r=testRightPad[1::2]
n_train_batches=indices_train_l.shape[0]/batch_size
n_test_batches=indices_test_l.shape[0]/batch_size
train_batch_start=list(numpy.arange(n_train_batches)*batch_size)
test_batch_start=list(numpy.arange(n_test_batches)*batch_size)
indices_train_l=theano.shared(numpy.asarray(indices_train_l, dtype=theano.config.floatX), borrow=True)
indices_train_r=theano.shared(numpy.asarray(indices_train_r, dtype=theano.config.floatX), borrow=True)
indices_test_l=theano.shared(numpy.asarray(indices_test_l, dtype=theano.config.floatX), borrow=True)
indices_test_r=theano.shared(numpy.asarray(indices_test_r, dtype=theano.config.floatX), borrow=True)
indices_train_l=T.cast(indices_train_l, 'int64')
indices_train_r=T.cast(indices_train_r, 'int64')
indices_test_l=T.cast(indices_test_l, 'int64')
indices_test_r=T.cast(indices_test_r, 'int64')
rand_values=random_value_normal((vocab_size+1, emb_size), theano.config.floatX, numpy.random.RandomState(1234))
rand_values[0]=numpy.array(numpy.zeros(emb_size),dtype=theano.config.floatX)
#rand_values[0]=numpy.array([1e-50]*emb_size)
#rand_values=load_word2vec_to_init(rand_values, rootPath+'vocab_lower_in_word2vec_embs_300d.txt')
rand_values=load_word2vec_to_init(rand_values, rootPath+'vocab_nonoverlap_in_word2vec_embs_300d.txt')
embeddings=theano.shared(value=rand_values, borrow=True)
#cost_tmp=0
error_sum=0
# allocate symbolic variables for the data
index = T.lscalar()
x_index_l = T.lmatrix('x_index_l') # now, x is the index matrix, must be integer
x_index_r = T.lmatrix('x_index_r')
y = T.lvector('y')
left_l=T.lscalar()
right_l=T.lscalar()
left_r=T.lscalar()
right_r=T.lscalar()
length_l=T.lscalar()
length_r=T.lscalar()
norm_length_l=T.dscalar()
norm_length_r=T.dscalar()
mts=T.dmatrix()
extra=T.dmatrix()
discri=T.dmatrix()
#wmf=T.dmatrix()
cost_tmp=T.dscalar()
#x=embeddings[x_index.flatten()].reshape(((batch_size*4),maxSentLength, emb_size)).transpose(0, 2, 1).flatten()
ishape = (emb_size, maxSentLength) # this is the size of MNIST images
filter_size=(emb_size,window_width)
#poolsize1=(1, ishape[1]-filter_size[1]+1) #?????????????????????????????
length_after_wideConv=ishape[1]+filter_size[1]-1
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
# Reshape matrix of rasterized images of shape (batch_size,28*28)
# to a 4D tensor, compatible with our LeNetConvPoolLayer
#layer0_input = x.reshape(((batch_size*4), 1, ishape[0], ishape[1]))
layer0_l_input = embeddings[x_index_l.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_r_input = embeddings[x_index_r.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
conv_W, conv_b=create_conv_para(rng, filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]))
#layer0_output = debug_print(layer0.output, 'layer0.output')
layer0_l = Conv_with_input_para(rng, input=layer0_l_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]), W=conv_W, b=conv_b)
layer0_r = Conv_with_input_para(rng, input=layer0_r_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]), W=conv_W, b=conv_b)
layer0_l_output=debug_print(layer0_l.output, 'layer0_l.output')
layer0_r_output=debug_print(layer0_r.output, 'layer0_r.output')
layer1=Average_Pooling_for_Top(rng, input_l=layer0_l_output, input_r=layer0_r_output, kern=nkerns[0],
left_l=left_l, right_l=right_l, left_r=left_r, right_r=right_r,
length_l=length_l+filter_size[1]-1, length_r=length_r+filter_size[1]-1,
dim=maxSentLength+filter_size[1]-1)
#layer2=HiddenLayer(rng, input=layer1_out, n_in=nkerns[0]*2, n_out=hidden_size, activation=T.tanh)
sum_uni_l=T.sum(layer0_l_input, axis=3).reshape((1, emb_size))
aver_uni_l=sum_uni_l/layer0_l_input.shape[3]
norm_uni_l=sum_uni_l/T.sqrt((sum_uni_l**2).sum())
sum_uni_r=T.sum(layer0_r_input, axis=3).reshape((1, emb_size))
aver_uni_r=sum_uni_r/layer0_r_input.shape[3]
norm_uni_r=sum_uni_r/T.sqrt((sum_uni_r**2).sum())
uni_cosine=cosine(sum_uni_l, sum_uni_r)
aver_uni_cosine=cosine(aver_uni_l, aver_uni_r)
uni_sigmoid_simi=debug_print(T.nnet.sigmoid(T.dot(norm_uni_l, norm_uni_r.T)).reshape((1,1)),'uni_sigmoid_simi')
linear=Linear(norm_uni_l, norm_uni_r)
poly=Poly(norm_uni_l, norm_uni_r)
sigmoid=Sigmoid(norm_uni_l, norm_uni_r)
rbf=RBF(norm_uni_l, norm_uni_r)
gesd=GESD(norm_uni_l, norm_uni_r)
eucli_1=1.0/(1.0+EUCLID(sum_uni_l, sum_uni_r))#25.2%
#eucli_1_exp=1.0/T.exp(EUCLID(sum_uni_l, sum_uni_r))
len_l=norm_length_l.reshape((1,1))
len_r=norm_length_r.reshape((1,1))
'''
len_l=length_l.reshape((1,1))
len_r=length_r.reshape((1,1))
'''
#length_gap=T.log(1+(T.sqrt((len_l-len_r)**2))).reshape((1,1))
#length_gap=T.sqrt((len_l-len_r)**2)
#layer3_input=mts
layer3_input=T.concatenate([mts,
eucli_1,uni_cosine,#linear, poly,sigmoid,rbf, gesd, #sum_uni_r-sum_uni_l,
layer1.output_eucli_to_simi,layer1.output_cosine, #layer1.output_vector_r-layer1.output_vector_l,
len_l, len_r,
extra
#discri
#wmf
], axis=1)#, layer2.output, layer1.output_cosine], axis=1)
#layer3_input=T.concatenate([mts,eucli, uni_cosine, len_l, len_r, norm_uni_l-(norm_uni_l+norm_uni_r)/2], axis=1)
#layer3=LogisticRegression(rng, input=layer3_input, n_in=11, n_out=2)
layer3=LogisticRegression(rng, input=layer3_input, n_in=14+(2)+(2)+2+5, n_out=3)
#L2_reg =(layer3.W** 2).sum()+(layer2.W** 2).sum()+(layer1.W** 2).sum()+(conv_W** 2).sum()
L2_reg =debug_print((layer3.W** 2).sum()+(conv_W** 2).sum(), 'L2_reg')#+(layer1.W** 2).sum()++(embeddings**2).sum()
cost_this =debug_print(layer3.negative_log_likelihood(y), 'cost_this')#+L2_weight*L2_reg
cost=debug_print((cost_this+cost_tmp)/update_freq+L2_weight*L2_reg, 'cost')
#cost=debug_print((cost_this+cost_tmp)/update_freq, 'cost')
test_model = theano.function([index], [layer3.errors(y),layer3_input, y],
givens={
x_index_l: indices_test_l[index: index + batch_size],
x_index_r: indices_test_r[index: index + batch_size],
y: testY[index: index + batch_size],
left_l: testLeftPad_l[index],
right_l: testRightPad_l[index],
left_r: testLeftPad_r[index],
right_r: testRightPad_r[index],
length_l: testLengths_l[index],
length_r: testLengths_r[index],
norm_length_l: normalized_test_length_l[index],
norm_length_r: normalized_test_length_r[index],
mts: mt_test[index: index + batch_size],
extra: extra_test[index: index + batch_size],
discri:discri_test[index: index + batch_size]
#wmf: wm_test[index: index + batch_size]
}, on_unused_input='ignore')
#params = layer3.params + layer2.params + layer1.params+ [conv_W, conv_b]
params = layer3.params+ [conv_W, conv_b]#+[embeddings]# + layer1.params
params_conv = [conv_W, conv_b]
accumulator=[]
for para_i in params:
eps_p=numpy.zeros_like(para_i.get_value(borrow=True),dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
grad_i=debug_print(grad_i,'grad_i')
acc = acc_i + T.sqr(grad_i)
updates.append((param_i, param_i - learning_rate * grad_i / T.sqrt(acc))) #AdaGrad
updates.append((acc_i, acc))
train_model = theano.function([index,cost_tmp], cost, updates=updates,
givens={
x_index_l: indices_train_l[index: index + batch_size],
x_index_r: indices_train_r[index: index + batch_size],
y: trainY[index: index + batch_size],
left_l: trainLeftPad_l[index],
right_l: trainRightPad_l[index],
left_r: trainLeftPad_r[index],
right_r: trainRightPad_r[index],
length_l: trainLengths_l[index],
length_r: trainLengths_r[index],
norm_length_l: normalized_train_length_l[index],
norm_length_r: normalized_train_length_r[index],
mts: mt_train[index: index + batch_size],
extra: extra_train[index: index + batch_size],
discri:discri_train[index: index + batch_size]
#wmf: wm_train[index: index + batch_size]
}, on_unused_input='ignore')
train_model_predict = theano.function([index], [cost_this,layer3.errors(y), layer3_input, y],
givens={
x_index_l: indices_train_l[index: index + batch_size],
x_index_r: indices_train_r[index: index + batch_size],
y: trainY[index: index + batch_size],
left_l: trainLeftPad_l[index],
right_l: trainRightPad_l[index],
left_r: trainLeftPad_r[index],
right_r: trainRightPad_r[index],
length_l: trainLengths_l[index],
length_r: trainLengths_r[index],
norm_length_l: normalized_train_length_l[index],
norm_length_r: normalized_train_length_r[index],
mts: mt_train[index: index + batch_size],
extra: extra_train[index: index + batch_size],
discri:discri_train[index: index + batch_size]
#wmf: wm_train[index: index + batch_size]
}, on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
patience_increase = 2 # wait this much longer when a new best is
# found
improvement_threshold = 0.995 # a relative improvement of this much is
# considered significant
validation_frequency = min(n_train_batches, patience / 2)
# go through this many
# minibatche before checking the network
# on the validation set; in this case we
# check every epoch
best_params = None
best_validation_loss = numpy.inf
best_iter = 0
test_score = 0.
start_time = time.clock()
mid_time = start_time
epoch = 0
done_looping = False
max_acc=0.0
best_epoch=0
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
#for minibatch_index in xrange(n_train_batches): # each batch
minibatch_index=0
shuffle(train_batch_start)#shuffle training data
cost_tmp=0.0
for batch_start in train_batch_start:
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * n_train_batches + minibatch_index +1
minibatch_index=minibatch_index+1
#if epoch %2 ==0:
# batch_start=batch_start+remain_train
#time.sleep(0.5)
#print batch_start
if iter%update_freq != 0:
cost_ij, error_ij, layer3_input, y=train_model_predict(batch_start)
#print 'layer3_input', layer3_input
cost_tmp+=cost_ij
error_sum+=error_ij
#print 'cost_acc ',cost_acc
#print 'cost_ij ', cost_ij
#print 'cost_tmp before update',cost_tmp
else:
cost_average= train_model(batch_start,cost_tmp)
#print 'layer3_input', layer3_input
error_sum=0
cost_tmp=0.0#reset for the next batch
#print 'cost_average ', cost_average
#print 'cost_this ',cost_this
#exit(0)
#exit(0)
if iter % n_train_batches == 0:
print 'training @ iter = '+str(iter)+' average cost: '+str(cost_average)+' error: '+str(error_sum)+'/'+str(update_freq)+' error rate: '+str(error_sum*1.0/update_freq)
#if iter ==1:
# exit(0)
if iter % validation_frequency == 0:
#write_file=open('log.txt', 'w')
test_losses=[]
test_y=[]
test_features=[]
for i in test_batch_start:
test_loss, layer3_input, y=test_model(i)
#test_losses = [test_model(i) for i in test_batch_start]
test_losses.append(test_loss)
test_y.append(y[0])
test_features.append(layer3_input[0])
#write_file.write(str(pred_y[0])+'\n')#+'\t'+str(testY[i].eval())+
#write_file.close()
test_score = numpy.mean(test_losses)
test_acc=1-test_score
print(('\t\t\tepoch %i, minibatch %i/%i, test acc of best '
'model %f %%') %
(epoch, minibatch_index, n_train_batches,test_acc * 100.))
#now, see the results of LR
#write_feature=open(rootPath+'feature_check.txt', 'w')
train_y=[]
train_features=[]
count=0
for batch_start in train_batch_start:
cost_ij, error_ij, layer3_input, y=train_model_predict(batch_start)
train_y.append(y[0])
train_features.append(layer3_input[0])
#write_feature.write(str(batch_start)+' '+' '.join(map(str,layer3_input[0]))+'\n')
#count+=1
#write_feature.close()
clf = svm.SVC(kernel='linear')#OneVsRestClassifier(LinearSVC()) #linear 76.11%, poly 75.19, sigmoid 66.50, rbf 73.33
clf.fit(train_features, train_y)
results=clf.predict(test_features)
#lr=LinearRegression().fit(train_features, train_y)
#results_lr=lr.predict(test_features)
corr_count=0
#corr_lr=0
corr_neu=0
neu_co=0
corr_ent=0
ent_co=0
corr_contr=0
contr_co=0
test_size=len(test_y)
for i in range(test_size):
if test_y[i]==0:#NEUTRAL
neu_co+=1
if results[i]==test_y[i]:
corr_neu+=1
elif test_y[i]==1:#ENTAILMENT
ent_co+=1
if results[i]==test_y[i]:
corr_ent+=1
elif test_y[i]==2:#CONTRADICTION
contr_co+=1
if results[i]==test_y[i]:
corr_contr+=1
'''
if results[i]==test_y[i]:
corr_count+=1
if test_y[i]==0: #NEUTRAL
corr_neu+=1
'''
#if numpy.absolute(results_lr[i]-test_y[i])<0.5:
# corr_lr+=1
corr_count=corr_neu+corr_ent+corr_contr
acc=corr_count*1.0/test_size
acc_neu=corr_neu*1.0/neu_co
acc_ent=corr_ent*1.0/ent_co
acc_contr=corr_contr*1.0/contr_co
#acc_lr=corr_lr*1.0/test_size
if acc > max_acc:
max_acc=acc
best_epoch=epoch
if test_acc > max_acc:
max_acc=test_acc
best_epoch=epoch
#if acc_lr> max_acc:
# max_acc=acc_lr
# best_epoch=epoch
print '\t\t\tsvm acc: ', acc, ' max acc: ', max_acc,'(at',best_epoch,')',' Neu: ',acc_neu, ' Ent: ',acc_ent, ' Contr: ',acc_contr
if patience <= iter:
done_looping = True
break
print 'Epoch ', epoch, 'uses ', (time.clock()-mid_time)/60.0, 'min'
mid_time = time.clock()
#print 'Batch_size: ', update_freq
end_time = time.clock()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' +
os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(learning_rate=0.01,
n_epochs=100,
batch_size=100,
emb_size=300,
char_emb_size=20,
hidden_size=10,
L2_weight=0.0001,
p_len_limit=400,
test_p_len_limit=100,
q_len_limit=20,
char_len=15,
filter_size=[5, 5, 5, 5, 5],
char_filter_size=5,
margin=0.85,
extra_size=5 + 11,
extra_emb=10,
distance=10,
distance_emb=10,
comment='add distance embs'): #extra_size=3+46+7
test_batch_size = batch_size
model_options = locals().copy()
print "model options", model_options
rootPath = '/mounts/data/proj/wenpeng/Dataset/SQuAD/'
rng = numpy.random.RandomState(23455)
word2id = {}
char2id = {}
train_Q_list, train_para_list, train_Q_mask, train_para_mask, train_Q_char_list, train_para_char_list, train_Q_char_mask, train_para_char_mask, train_span_label_list, train_word_label_list, train_para_extras, word2id, char2id = load_squad_cnn_rank_span_word_train(
word2id, char2id, p_len_limit, q_len_limit, char_len)
test_Q_list, test_para_list, test_Q_mask, test_para_mask, test_Q_char_list, test_para_char_list, test_Q_char_mask, test_para_char_mask, q_idlist, test_para_extras, word2id, char2id, test_para_wordlist_list = load_squad_cnn_rank_span_word_dev(
word2id, char2id, test_p_len_limit, q_len_limit, char_len)
'''
#store variables into file
'''
# train_variables = [train_Q_list,train_para_list, train_Q_mask, train_para_mask, train_Q_char_list,train_para_char_list, train_Q_char_mask, train_para_char_mask, train_span_label_list, train_word_label_list, train_para_extras]
# test_variables =[test_Q_list, test_para_list, test_Q_mask, test_para_mask,test_Q_char_list, test_para_char_list, test_Q_char_mask, test_para_char_mask, q_idlist, test_para_extras, word2id, char2id, test_para_wordlist_list]
# with open(rootPath+'extra.3.pickle', 'wb') as f: # Python 3: open(..., 'wb')
# cPickle.dump(train_variables+test_variables, f, protocol=cPickle.HIGHEST_PROTOCOL)
# f.close()
# print 'variable stored successfully'
# exit(0)
'''
load variables from file
'''
# before_load_time = time.time()
# with open(rootPath+'extra.3.pickle', 'rb') as f: # Python 3: open(..., 'rb')
# train_Q_list,train_para_list, train_Q_mask, train_para_mask, train_Q_char_list,train_para_char_list, train_Q_char_mask, train_para_char_mask, train_span_label_list, train_word_label_list, train_para_extras,test_Q_list, test_para_list, test_Q_mask, test_para_mask,test_Q_char_list, test_para_char_list, test_Q_char_mask, test_para_char_mask, q_idlist, test_para_extras, word2id, char2id, test_para_wordlist_list = cPickle.load(f)
# f.close()
# print 'load data variables successfully, spend: ', (time.time()-before_load_time)/60.0, ' mins'
train_size = len(train_para_list)
test_size = len(test_para_list)
train_Q_list = numpy.asarray(train_Q_list, dtype='int32')
train_para_list = numpy.asarray(train_para_list, dtype='int32')
train_Q_mask = numpy.asarray(train_Q_mask, dtype=theano.config.floatX)
train_para_mask = numpy.asarray(train_para_mask,
dtype=theano.config.floatX)
train_Q_char_list = numpy.asarray(train_Q_char_list, dtype='int32')
train_para_char_list = numpy.asarray(train_para_char_list, dtype='int32')
train_Q_char_mask = numpy.asarray(train_Q_char_mask,
dtype=theano.config.floatX)
train_para_char_mask = numpy.asarray(train_para_char_mask,
dtype=theano.config.floatX)
train_para_extras = numpy.asarray(train_para_extras,
dtype=theano.config.floatX)
train_span_label_list = numpy.asarray(train_span_label_list, dtype='int32')
train_word_label_list = numpy.asarray(train_word_label_list, dtype='int32')
test_Q_list = numpy.asarray(test_Q_list, dtype='int32')
test_para_list = numpy.asarray(test_para_list, dtype='int32')
test_Q_mask = numpy.asarray(test_Q_mask, dtype=theano.config.floatX)
test_para_mask = numpy.asarray(test_para_mask, dtype=theano.config.floatX)
test_Q_char_list = numpy.asarray(test_Q_char_list, dtype='int32')
test_para_char_list = numpy.asarray(test_para_char_list, dtype='int32')
test_Q_char_mask = numpy.asarray(test_Q_char_mask,
dtype=theano.config.floatX)
test_para_char_mask = numpy.asarray(test_para_char_mask,
dtype=theano.config.floatX)
test_para_extras = numpy.asarray(test_para_extras,
dtype=theano.config.floatX)
vocab_size = len(word2id)
print 'vocab size: ', vocab_size
rand_values = random_value_normal((vocab_size + 1, emb_size),
theano.config.floatX, rng)
rand_values[0] = numpy.array(numpy.zeros(emb_size),
dtype=theano.config.floatX)
id2word = {y: x for x, y in word2id.iteritems()}
word2vec = load_glove()
rand_values = load_word2vec_to_init(rand_values, id2word, word2vec)
embeddings = theano.shared(value=rand_values, borrow=True)
char_size = len(char2id)
print 'char size: ', char_size
char_rand_values = random_value_normal((char_size + 1, char_emb_size),
theano.config.floatX, rng)
char_embeddings = theano.shared(value=char_rand_values, borrow=True)
extra_rand_values = random_value_normal((extra_size, extra_emb),
theano.config.floatX, rng)
extra_embeddings = theano.shared(value=extra_rand_values, borrow=True)
distance_rand_values = random_value_normal(
(2 * distance + 1, distance_emb), theano.config.floatX, rng)
distance_embeddings = theano.shared(value=distance_rand_values,
borrow=True)
# allocate symbolic variables for the data
# index = T.lscalar()
paragraph = T.imatrix('paragraph')
questions = T.imatrix('questions')
span_indices = T.ivector() #batch
word_indices = T.imatrix() #(batch, 2)
ans_indices = T.ivector() # for one batch, the length is dynamic
para_mask = T.fmatrix('para_mask')
q_mask = T.fmatrix('q_mask')
extra = T.ftensor3() #(batch, p_len, 3)
char_paragraph = T.imatrix() #(batch, char_len*p_len)
char_questions = T.imatrix()
char_para_mask = T.fmatrix()
char_q_mask = T.fmatrix()
true_p_len = T.iscalar()
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
true_batch_size = paragraph.shape[0]
extra_rep_batch = T.concatenate(
[extra.dot(extra_embeddings), extra],
axis=2) #(batch, p_len, extra_emb+extra_size)
zero_pad = T.zeros((true_batch_size, 1, extra_emb + extra_size))
left_context = T.concatenate([zero_pad, extra_rep_batch[:, :-1, :]],
axis=1) #(batch, p_len, extra_emb+extra_size)
right_context = T.concatenate(
[extra_rep_batch[:, 1:, :], zero_pad],
axis=1) #(batch, p_len, extra_emb+extra_size)
left_context_2 = T.concatenate(
[zero_pad, zero_pad, extra_rep_batch[:, :-2, :]],
axis=1) #(batch, p_len, extra_emb+extra_size)
right_context_2 = T.concatenate(
[extra_rep_batch[:, 2:, :], zero_pad, zero_pad],
axis=1) #(batch, p_len, extra_emb+extra_size)
simi2left = T.sum(extra_rep_batch * left_context,
axis=2).dimshuffle(0, 1, 'x') #(batch, p_len, 1)
simi2right = T.sum(extra_rep_batch * right_context,
axis=2).dimshuffle(0, 1, 'x') #(batch, p_len, 1)
cos2left = cosine_tensor3(extra_rep_batch, left_context,
2).dimshuffle(0, 1, 'x')
cos2right = cosine_tensor3(extra_rep_batch, right_context,
2).dimshuffle(0, 1, 'x')
diff2left = extra_rep_batch - left_context
diff2right = extra_rep_batch - right_context #(batch, p_len, extra_emb+extra_size)
extra_rep_batch = T.concatenate(
[
extra_rep_batch, left_context, right_context, left_context_2,
right_context_2, diff2left, diff2right, simi2left, simi2right,
cos2left, cos2right
],
axis=2) #batch, p_len, 7*(extra_emb+extra_size)+4)
true_extra_size = 7 * (extra_emb + extra_size) + 4
common_input_p = embeddings[paragraph.flatten()].reshape(
(true_batch_size, true_p_len,
emb_size)) #the input format can be adapted into CNN or GRU or LSTM
common_input_q = embeddings[questions.flatten()].reshape(
(true_batch_size, q_len_limit, emb_size))
char_common_input_p = char_embeddings[char_paragraph.flatten()].reshape(
(true_batch_size * true_p_len, char_len, char_emb_size
)) #the input format can be adapted into CNN or GRU or LSTM
char_common_input_q = char_embeddings[char_questions.flatten()].reshape(
(true_batch_size * q_len_limit, char_len, char_emb_size))
char_p_masks = char_para_mask.reshape(
(true_batch_size * true_p_len, char_len))
char_q_masks = char_q_mask.reshape(
(true_batch_size * q_len_limit, char_len))
conv_W_char, conv_b_char = create_conv_para(
rng, filter_shape=(char_emb_size, 1, char_emb_size, char_filter_size))
conv_W_1, conv_b_1 = create_conv_para(
rng,
filter_shape=(hidden_size, 1,
emb_size + char_emb_size + true_extra_size,
filter_size[0]))
conv_W_2, conv_b_2 = create_conv_para(rng,
filter_shape=(hidden_size, 1,
hidden_size,
filter_size[1]))
conv_W_3, conv_b_3 = create_conv_para(rng,
filter_shape=(hidden_size, 1,
hidden_size,
filter_size[2]))
# conv_W_4, conv_b_4=create_conv_para(rng, filter_shape=(hidden_size, 1, hidden_size, filter_size[3]))
# conv_W_5, conv_b_5=create_conv_para(rng, filter_shape=(hidden_size, 1, hidden_size, filter_size[4]))
conv_W_1_q, conv_b_1_q = create_conv_para(
rng,
filter_shape=(hidden_size, 1, emb_size + char_emb_size,
filter_size[0]))
conv_W_2_q, conv_b_2_q = create_conv_para(rng,
filter_shape=(hidden_size, 1,
hidden_size,
filter_size[1]))
conv_W_3_q, conv_b_3_q = create_conv_para(rng,
filter_shape=(hidden_size, 1,
hidden_size,
filter_size[2]))
# conv_W_4_q, conv_b_4_q=create_conv_para(rng, filter_shape=(hidden_size, 1, hidden_size, filter_size[3]))
# conv_W_5_q, conv_b_5_q=create_conv_para(rng, filter_shape=(hidden_size, 1, hidden_size, filter_size[4]))
CNN_para = [
conv_W_1,
conv_b_1,
conv_W_2,
conv_b_2,
conv_W_1_q,
conv_b_1_q,
conv_W_2_q,
conv_b_2_q,
conv_W_3,
conv_b_3,
conv_W_3_q,
conv_b_3_q,
# conv_W_4, conv_b_4, conv_W_5, conv_b_5,conv_W_4_q, conv_b_4_q, conv_W_5_q, conv_b_5_q,
conv_W_char,
conv_b_char
]
span_input4score, word_input4score, overall_span_hidden_size, overall_word_hidden_size = squad_cnn_rank_spans_word(
rng,
common_input_p,
common_input_q,
char_common_input_p,
char_common_input_q,
batch_size,
p_len_limit,
q_len_limit,
emb_size,
char_emb_size,
char_len,
filter_size,
char_filter_size,
hidden_size,
conv_W_1,
conv_b_1,
conv_W_2,
conv_b_2,
conv_W_1_q,
conv_b_1_q,
conv_W_2_q,
conv_b_2_q,
conv_W_char,
conv_b_char,
conv_W_3,
conv_b_3,
conv_W_3_q,
conv_b_3_q,
# conv_W_4, conv_b_4, conv_W_4_q, conv_b_4_q,
# conv_W_5, conv_b_5, conv_W_5_q, conv_b_5_q,
para_mask,
q_mask,
char_p_masks,
char_q_masks,
extra_rep_batch,
true_extra_size)
test_span_input4score, test_word_input4score, _, _ = squad_cnn_rank_spans_word(
rng,
common_input_p,
common_input_q,
char_common_input_p,
char_common_input_q,
test_batch_size,
test_p_len_limit,
q_len_limit,
emb_size,
char_emb_size,
char_len,
filter_size,
char_filter_size,
hidden_size,
conv_W_1,
conv_b_1,
conv_W_2,
conv_b_2,
conv_W_1_q,
conv_b_1_q,
conv_W_2_q,
conv_b_2_q,
conv_W_char,
conv_b_char,
conv_W_3,
conv_b_3,
conv_W_3_q,
conv_b_3_q,
# conv_W_4, conv_b_4, conv_W_4_q, conv_b_4_q,
# conv_W_5, conv_b_5, conv_W_5_q, conv_b_5_q,
para_mask,
q_mask,
char_p_masks,
char_q_masks,
extra_rep_batch,
true_extra_size) #(batch, hidden, gram_size)
gram_size = 5 * true_p_len - (0 + 1 + 2 + 3 + 4)
# U_a = create_ensemble_para(rng, 1, 4*hidden_size)
# norm_U_a=normalize_matrix(U_a)
# span_scores_matrix=T.dot(span_input4score.dimshuffle(0,2,1), norm_U_a).reshape((batch_size, gram_size)) #(batch, 13*para_len-78, 1)
span_HL_1_para = create_ensemble_para(rng, hidden_size,
overall_span_hidden_size)
span_HL_2_para = create_ensemble_para(rng, hidden_size, hidden_size)
span_HL_3_para = create_ensemble_para(rng, hidden_size, hidden_size)
span_HL_4_para = create_ensemble_para(rng, hidden_size, hidden_size)
span_U_a = create_ensemble_para(rng, 1,
hidden_size + overall_span_hidden_size)
norm_span_U_a = normalize_matrix(span_U_a)
norm_span_HL_1_para = normalize_matrix(span_HL_1_para)
norm_span_HL_2_para = normalize_matrix(span_HL_2_para)
norm_span_HL_3_para = normalize_matrix(span_HL_3_para)
norm_span_HL_4_para = normalize_matrix(span_HL_4_para)
span_scores_matrix = add_HLs_2_tensor3(span_input4score,
norm_span_HL_1_para,
norm_span_HL_2_para,
norm_span_HL_3_para,
norm_span_HL_4_para, norm_span_U_a,
batch_size, gram_size)
span_scores = T.nnet.softmax(span_scores_matrix) #(batch, 7*para_len-21)
loss_neg_likelihood = -T.mean(
T.log(span_scores[T.arange(batch_size), span_indices]))
#ranking loss
tanh_span_scores_matrix = span_scores #T.tanh(span_scores_matrix) #(batch, gram_size)
index_matrix = T.zeros((batch_size, gram_size), dtype=theano.config.floatX)
new_index_matrix = T.set_subtensor(
index_matrix[T.arange(batch_size), span_indices], 1.0)
prob_batch_posi = tanh_span_scores_matrix[new_index_matrix.nonzero()]
prob_batch_nega = tanh_span_scores_matrix[(1.0 -
new_index_matrix).nonzero()]
repeat_posi = T.extra_ops.repeat(prob_batch_posi,
prob_batch_nega.shape[0],
axis=0)
repeat_nega = T.extra_ops.repeat(prob_batch_nega.dimshuffle('x', 0),
prob_batch_posi.shape[0],
axis=0).flatten()
loss_rank = T.mean(T.maximum(0.0, margin - repeat_posi + repeat_nega))
span_loss = loss_neg_likelihood + loss_rank
# test_span_scores_matrix=T.dot(test_span_input4score.dimshuffle(0,2,1), norm_U_a).reshape((true_batch_size, gram_size)) #(batch, 13*para_len-78)
test_span_scores_matrix = add_HLs_2_tensor3(
test_span_input4score, norm_span_HL_1_para, norm_span_HL_2_para,
norm_span_HL_3_para, norm_span_HL_4_para, norm_span_U_a,
true_batch_size, gram_size)
#word
HL_1_para = create_ensemble_para(rng, hidden_size,
overall_word_hidden_size)
HL_2_para = create_ensemble_para(rng, hidden_size, hidden_size)
HL_3_para = create_ensemble_para(rng, hidden_size, hidden_size)
HL_4_para = create_ensemble_para(rng, hidden_size, hidden_size)
start_U_a = create_ensemble_para(rng, 1,
hidden_size + overall_word_hidden_size)
norm_start_U_a = normalize_matrix(start_U_a)
norm_HL_1_para = normalize_matrix(HL_1_para)
norm_HL_2_para = normalize_matrix(HL_2_para)
norm_HL_3_para = normalize_matrix(HL_3_para)
norm_HL_4_para = normalize_matrix(HL_4_para)
end_HL_1_para = create_ensemble_para(
rng, hidden_size, overall_word_hidden_size + distance_emb)
end_HL_2_para = create_ensemble_para(rng, hidden_size, hidden_size)
end_HL_3_para = create_ensemble_para(rng, hidden_size, hidden_size)
end_HL_4_para = create_ensemble_para(rng, hidden_size, hidden_size)
end_U_a = create_ensemble_para(
rng, 1, hidden_size + overall_word_hidden_size + distance_emb)
end_norm_U_a = normalize_matrix(end_U_a)
end_norm_HL_1_para = normalize_matrix(end_HL_1_para)
end_norm_HL_2_para = normalize_matrix(end_HL_2_para)
end_norm_HL_3_para = normalize_matrix(end_HL_3_para)
end_norm_HL_4_para = normalize_matrix(end_HL_4_para)
start_scores_matrix = add_HLs_2_tensor3(word_input4score, norm_HL_1_para,
norm_HL_2_para, norm_HL_3_para,
norm_HL_4_para, norm_start_U_a,
batch_size, true_p_len)
start_scores = T.nnet.softmax(start_scores_matrix) #(batch, para_len)
'''
forward start info to end prediction
'''
distance_matrix = word_indices[:, 0].dimshuffle(
0, 'x') - T.arange(true_p_len).dimshuffle('x', 0) #(batch, p_len)
distance_trunc_matrix = T.maximum(
-distance, T.minimum(distance,
distance_matrix)) + distance #(batch, p_len)
zero_distance_matrix = T.zeros(
(true_batch_size * true_p_len, 2 * distance + 1))
filled_distance_matrix = T.set_subtensor(
zero_distance_matrix[T.arange(true_batch_size * true_p_len),
distance_trunc_matrix.flatten()], 1.0)
filled_distance_tensor3 = filled_distance_matrix.reshape(
(true_batch_size,
true_p_len, 2 * distance + 1)).dot(distance_embeddings).dimshuffle(
0, 2, 1) #(batch_size, distance_emb, p_len)
end_word_input4score = T.concatenate(
[word_input4score, filled_distance_tensor3],
axis=1) #(batch, +distance_emb, p_len)
end_scores_matrix = add_HLs_2_tensor3(end_word_input4score,
end_norm_HL_1_para,
end_norm_HL_2_para,
end_norm_HL_3_para,
end_norm_HL_4_para, end_norm_U_a,
batch_size, true_p_len)
end_scores = T.nnet.softmax(end_scores_matrix) #(batch, para_len)
start_loss_neg_likelihood = -T.mean(
T.log(start_scores[T.arange(batch_size), word_indices[:, 0]]))
end_loss_neg_likelihood = -T.mean(
T.log(end_scores[T.arange(batch_size), word_indices[:, 1]]))
#ranking loss start
tanh_start_scores_matrix = start_scores #T.tanh(span_scores_matrix) #(batch, gram_size)
start_index_matrix = T.zeros((batch_size, p_len_limit),
dtype=theano.config.floatX)
start_new_index_matrix = T.set_subtensor(
start_index_matrix[T.arange(batch_size), word_indices[:, 0]], 1.0)
start_prob_batch_posi = tanh_start_scores_matrix[
start_new_index_matrix.nonzero()]
start_prob_batch_nega = tanh_start_scores_matrix[(
1.0 - start_new_index_matrix).nonzero()]
start_repeat_posi = T.extra_ops.repeat(start_prob_batch_posi,
start_prob_batch_nega.shape[0],
axis=0)
start_repeat_nega = T.extra_ops.repeat(start_prob_batch_nega.dimshuffle(
'x', 0),
start_prob_batch_posi.shape[0],
axis=0).flatten()
start_loss_rank = T.mean(
T.maximum(0.0, margin - start_repeat_posi + start_repeat_nega))
#ranking loss END
end_tanh_scores_matrix = end_scores #T.tanh(span_scores_matrix) #(batch, gram_size)
end_index_matrix = T.zeros((batch_size, p_len_limit),
dtype=theano.config.floatX)
end_new_index_matrix = T.set_subtensor(
end_index_matrix[T.arange(batch_size), word_indices[:, 1]], 1.0)
end_prob_batch_posi = end_tanh_scores_matrix[
end_new_index_matrix.nonzero()]
end_prob_batch_nega = end_tanh_scores_matrix[(
1.0 - end_new_index_matrix).nonzero()]
end_repeat_posi = T.extra_ops.repeat(end_prob_batch_posi,
end_prob_batch_nega.shape[0],
axis=0)
end_repeat_nega = T.extra_ops.repeat(end_prob_batch_nega.dimshuffle(
'x', 0),
end_prob_batch_posi.shape[0],
axis=0).flatten()
end_loss_rank = T.mean(
T.maximum(0.0, margin - end_repeat_posi + end_repeat_nega))
word_loss = start_loss_neg_likelihood + end_loss_neg_likelihood + start_loss_rank + end_loss_rank
#test
test_start_scores_matrix = add_HLs_2_tensor3(
test_word_input4score, norm_HL_1_para, norm_HL_2_para, norm_HL_3_para,
norm_HL_4_para, norm_start_U_a, true_batch_size,
true_p_len) #(batch, test_p_len)
mask_test_start_return = test_start_scores_matrix * para_mask #(batch, p_len)
'''
forward start info to end prediction in testing
'''
test_distance_matrix = T.argmax(mask_test_start_return, axis=1).dimshuffle(
0, 'x') - T.arange(true_p_len).dimshuffle('x', 0) #(batch, p_len)
test_distance_trunc_matrix = T.maximum(
-distance, T.minimum(distance,
test_distance_matrix)) + distance #(batch, p_len)
test_zero_distance_matrix = T.zeros(
(true_batch_size * true_p_len, 2 * distance + 1))
test_filled_distance_matrix = T.set_subtensor(
test_zero_distance_matrix[T.arange(true_batch_size * true_p_len),
test_distance_trunc_matrix.flatten()], 1.0)
test_filled_distance_tensor3 = test_filled_distance_matrix.reshape(
(true_batch_size,
true_p_len, 2 * distance + 1)).dot(distance_embeddings).dimshuffle(
0, 2, 1) #(batch_size, distance_emb, p_len)
test_end_word_input4score = T.concatenate(
[test_word_input4score, test_filled_distance_tensor3],
axis=1) #(batch, +distance-emb, p_len)
end_test_scores_matrix = add_HLs_2_tensor3(
test_end_word_input4score, end_norm_HL_1_para, end_norm_HL_2_para,
end_norm_HL_3_para, end_norm_HL_4_para, end_norm_U_a, true_batch_size,
true_p_len) #(batch, test_p_len)
end_mask_test_return = end_test_scores_matrix * para_mask #(batch, p_len)
word_gram_1 = mask_test_start_return + end_mask_test_return
word_gram_2 = mask_test_start_return[:, :
-1] + end_mask_test_return[:,
1:] #(batch* hidden_size, maxsenlen-1)
word_gram_3 = mask_test_start_return[:, :
-2] + end_mask_test_return[:,
2:] #(batch* hidden_size, maxsenlen-2)
word_gram_4 = mask_test_start_return[:, :
-3] + end_mask_test_return[:,
3:] #(batch* hidden_size, maxsenlen-3)
word_gram_5 = mask_test_start_return[:, :
-4] + end_mask_test_return[:,
4:] #(batch* hidden_size, maxsenlen-4)
word_pair_scores = T.concatenate(
[word_gram_1, word_gram_2, word_gram_3, word_gram_4, word_gram_5],
axis=1) #(batch_size, gram_size)
#ans words train
ans_HL_1_para = create_ensemble_para(rng, hidden_size,
overall_word_hidden_size)
ans_HL_2_para = create_ensemble_para(rng, hidden_size, hidden_size)
ans_HL_3_para = create_ensemble_para(rng, hidden_size, hidden_size)
ans_HL_4_para = create_ensemble_para(rng, hidden_size, hidden_size)
ans_U_a = create_ensemble_para(rng, 1,
hidden_size + overall_word_hidden_size)
norm_ans_U_a = normalize_matrix(ans_U_a)
norm_ans_HL_1_para = normalize_matrix(ans_HL_1_para)
norm_ans_HL_2_para = normalize_matrix(ans_HL_2_para)
norm_ans_HL_3_para = normalize_matrix(ans_HL_3_para)
norm_ans_HL_4_para = normalize_matrix(ans_HL_4_para)
ans_scores_matrix = add_HLs_2_tensor3(word_input4score, norm_ans_HL_1_para,
norm_ans_HL_2_para,
norm_ans_HL_3_para,
norm_ans_HL_4_para, norm_ans_U_a,
batch_size, true_p_len)
ans_scores_vec = T.nnet.softmax(
ans_scores_matrix).flatten() #(batch, para_len)
ans_loss_neg_likelihood = -T.mean(T.log(ans_scores_vec[ans_indices]))
ans_index_vec = T.zeros((batch_size, p_len_limit),
dtype=theano.config.floatX).flatten()
ans_new_index = T.set_subtensor(ans_index_vec[ans_indices], 1.0)
ans_prob_batch_posi = ans_scores_vec[ans_new_index.nonzero()]
ans_prob_batch_nega = ans_scores_vec[(1.0 - ans_new_index).nonzero()]
ans_repeat_posi = T.extra_ops.repeat(ans_prob_batch_posi,
ans_prob_batch_nega.shape[0],
axis=0)
ans_repeat_nega = T.extra_ops.repeat(ans_prob_batch_nega.dimshuffle(
'x', 0),
ans_prob_batch_posi.shape[0],
axis=0).flatten()
ans_loss_rank = T.mean(
T.maximum(0.0, margin - ans_repeat_posi + ans_repeat_nega))
ans_loss = ans_loss_neg_likelihood + ans_loss_rank
#ans words test
test_ans_scores_matrix = add_HLs_2_tensor3(
test_word_input4score, norm_ans_HL_1_para, norm_ans_HL_2_para,
norm_ans_HL_3_para, norm_ans_HL_4_para, norm_ans_U_a, true_batch_size,
true_p_len)
test_ans_scores_matrix = test_ans_scores_matrix * para_mask #T.nnet.softmax(test_ans_scores_matrix) #(batch, para_len)
ans_gram_1 = test_ans_scores_matrix
ans_gram_2 = (test_ans_scores_matrix[:, :-1] +
test_ans_scores_matrix[:, 1:]
) / 2.0 #(batch* hidden_size, maxsenlen-1)
ans_gram_3 = (test_ans_scores_matrix[:, :-2] +
test_ans_scores_matrix[:, 1:-1] +
test_ans_scores_matrix[:, 2:]
) / 3.0 #(batch* hidden_size, maxsenlen-2)
ans_gram_4 = (
test_ans_scores_matrix[:, :-3] + test_ans_scores_matrix[:, 1:-2] +
test_ans_scores_matrix[:, 2:-1] + test_ans_scores_matrix[:, 3:]
) / 4.0 #(batch* hidden_size, maxsenlen-3)
ans_gram_5 = (
test_ans_scores_matrix[:, :-4] + test_ans_scores_matrix[:, 1:-3] +
test_ans_scores_matrix[:, 2:-2] + test_ans_scores_matrix[:, 3:-1] +
test_ans_scores_matrix[:,
4:]) / 5.0 #(batch* hidden_size, maxsenlen-4)
ans_word_scores = T.concatenate(
[ans_gram_1, ans_gram_2, ans_gram_3, ans_gram_4, ans_gram_5],
axis=1) #(batch, hidden_size, maxsenlen-(0+1+2+3+4))
'''
form test spans and masks
'''
test_span_word_scores_matrix = word_pair_scores + ans_word_scores #test_span_scores_matrix+
test_spans_mask_1 = para_mask
test_spans_mask_2 = para_mask[:, :
-1] * para_mask[:,
1:] #(batch* hidden_size, maxsenlen-1)
test_spans_mask_3 = para_mask[:, :
-2] * para_mask[:, 1:
-1] * para_mask[:,
2:] #(batch* hidden_size, maxsenlen-2)
test_spans_mask_4 = para_mask[:, :
-3] * para_mask[:, 1:
-2] * para_mask[:, 2:
-1] * para_mask[:,
3:] #(batch* hidden_size, maxsenlen-3)
test_spans_mask_5 = para_mask[:, :
-4] * para_mask[:, 1:
-3] * para_mask[:, 2:
-2] * para_mask[:,
3:
-1] * para_mask[:,
4:]
test_spans_mask = T.concatenate([
test_spans_mask_1, test_spans_mask_2, test_spans_mask_3,
test_spans_mask_4, test_spans_mask_5
],
axis=1) #(batch, 5*p_len -)
# test_return=T.argmax(test_span_word_scores_matrix, axis=1) #batch T.argmax(test_span_word_scores_matrix*test_spans_mask, axis=1) #batch
test_return = T.argmax(test_span_word_scores_matrix * test_spans_mask,
axis=1) #batch
# params = [embeddings,char_embeddings]+NN_para+[U_a]
params = (
[embeddings, char_embeddings, extra_embeddings, distance_embeddings] +
CNN_para
# +[span_U_a,span_HL_1_para,span_HL_2_para,span_HL_3_para,span_HL_4_para]
+ [start_U_a, HL_1_para, HL_2_para, HL_3_para, HL_4_para] +
[end_U_a, end_HL_1_para, end_HL_2_para, end_HL_3_para, end_HL_4_para] +
[ans_U_a, ans_HL_1_para, ans_HL_2_para, ans_HL_3_para, ans_HL_4_para])
L2_reg = L2norm_paraList([
embeddings,
char_embeddings,
extra_embeddings,
distance_embeddings,
conv_W_1,
conv_W_2,
conv_W_1_q,
conv_W_2_q,
conv_W_char,
conv_W_3,
conv_W_3_q,
# conv_W_4, conv_W_5,conv_W_4_q, conv_W_5_q,
# span_U_a,span_HL_1_para,span_HL_2_para,span_HL_3_para,span_HL_4_para,
start_U_a,
HL_1_para,
HL_2_para,
HL_3_para,
HL_4_para,
end_U_a,
end_HL_1_para,
end_HL_2_para,
end_HL_3_para,
end_HL_4_para,
ans_U_a,
ans_HL_1_para,
ans_HL_2_para,
ans_HL_3_para,
ans_HL_4_para
])
#L2_reg = L2norm_paraList(params)
cost = word_loss + ans_loss + L2_weight * L2_reg #span_loss+
accumulator = []
for para_i in params:
eps_p = numpy.zeros_like(para_i.get_value(borrow=True),
dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
# print grad_i.type
acc = acc_i + T.sqr(grad_i)
updates.append((param_i, param_i - learning_rate * grad_i /
(T.sqrt(acc) + 1e-8))) #AdaGrad
updates.append((acc_i, acc))
# updates=Adam(cost, params, lr=0.0001)
train_model = theano.function([
paragraph, questions, span_indices, word_indices, ans_indices,
para_mask, q_mask, extra, char_paragraph, char_questions,
char_para_mask, char_q_mask, true_p_len
],
cost,
updates=updates,
on_unused_input='ignore')
test_model = theano.function([
paragraph, questions, para_mask, q_mask, extra, char_paragraph,
char_questions, char_para_mask, char_q_mask, true_p_len
],
test_return,
on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
best_params = None
best_validation_loss = numpy.inf
best_iter = 0
test_score = 0.
start_time = time.time()
mid_time = start_time
past_time = mid_time
epoch = 0
done_looping = False
#para_list, Q_list, label_list, mask, vocab_size=load_train()
n_train_batches = train_size / batch_size
# remain_train=train_size%batch_size
train_batch_start = list(numpy.arange(n_train_batches) *
batch_size) + [train_size - batch_size]
n_test_batches = test_size / test_batch_size
# remain_test=test_size%batch_size
test_batch_start = list(numpy.arange(n_test_batches) *
test_batch_size) + [test_size - test_batch_size]
max_F1_acc = 0.0
max_exact_acc = 0.0
cost_i = 0.0
train_ids = range(train_size)
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
random.Random(200).shuffle(train_ids)
iter_accu = 0
for para_id in train_batch_start:
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * n_train_batches + iter_accu + 1
iter_accu += 1
train_id_batch = train_ids[para_id:para_id + batch_size]
boundary_labels_batch = train_word_label_list[train_id_batch]
ans_label_list = []
for i in range(batch_size):
start = boundary_labels_batch[i][0] + i * p_len_limit
end = boundary_labels_batch[i][1] + i * p_len_limit
ans_label_list += range(start, end + 1)
ans_label_list = numpy.asarray(ans_label_list, dtype='int32')
cost_i += train_model(
train_para_list[train_id_batch], train_Q_list[train_id_batch],
train_span_label_list[train_id_batch], boundary_labels_batch,
ans_label_list, train_para_mask[train_id_batch],
train_Q_mask[train_id_batch],
train_para_extras[train_id_batch],
train_para_char_list[train_id_batch],
train_Q_char_list[train_id_batch],
train_para_char_mask[train_id_batch],
train_Q_char_mask[train_id_batch], p_len_limit)
#print iter
if iter % 100 == 0:
print 'Epoch ', epoch, 'iter ' + str(
iter) + ' average cost: ' + str(cost_i / iter), 'uses ', (
time.time() - past_time) / 60.0, 'min'
print 'Testing...'
past_time = time.time()
pred_dict = {}
q_amount = 0
for test_para_id in test_batch_start:
batch_predict_ids = test_model(
test_para_list[test_para_id:test_para_id +
test_batch_size],
test_Q_list[test_para_id:test_para_id +
test_batch_size],
test_para_mask[test_para_id:test_para_id +
test_batch_size],
test_Q_mask[test_para_id:test_para_id +
test_batch_size],
test_para_extras[test_para_id:test_para_id +
test_batch_size],
test_para_char_list[test_para_id:test_para_id +
test_batch_size],
test_Q_char_list[test_para_id:test_para_id +
test_batch_size],
test_para_char_mask[test_para_id:test_para_id +
test_batch_size],
test_Q_char_mask[test_para_id:test_para_id +
test_batch_size], test_p_len_limit)
test_para_wordlist_batch = test_para_wordlist_list[
test_para_id:test_para_id + test_batch_size]
q_ids_batch = q_idlist[test_para_id:test_para_id +
test_batch_size]
q_amount += test_batch_size
for q in range(test_batch_size): #for each question
pred_ans = decode_predict_id(
batch_predict_ids[q], test_para_wordlist_batch[q])
q_id = q_ids_batch[q]
pred_dict[q_id] = pred_ans
# print q_id, test_para_wordlist_batch[q],'\t',pred_ans
with codecs.open(rootPath + 'predictions.txt', 'w',
'utf-8') as outfile:
json.dump(pred_dict, outfile)
F1_acc, exact_acc = standard_eval(rootPath + 'dev-v1.1.json',
rootPath + 'predictions.txt')
if F1_acc > max_F1_acc:
max_F1_acc = F1_acc
if exact_acc > max_exact_acc:
max_exact_acc = exact_acc
# if max_exact_acc > max_EM:
# store_model_to_file(rootPath+'Best_Paras_google_'+str(max_exact_acc), params)
# print 'Finished storing best params at:', max_exact_acc
print 'current average F1:', F1_acc, '\t\tmax F1:', max_F1_acc, 'current exact:', exact_acc, '\t\tmax exact_acc:', max_exact_acc
if patience <= iter:
done_looping = True
break
print 'Epoch ', epoch, 'uses ', (time.time() - mid_time) / 60.0, 'min'
mid_time = time.time()
#print 'Batch_size: ', update_freq
end_time = time.time()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' + os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
return max_exact_acc
def evaluate_lenet5(learning_rate=0.02,
n_epochs=100,
emb_size=300,
batch_size=70,
filter_size=[3],
maxSentLen=40,
hidden_size=[300, 300]):
model_options = locals().copy()
print "model options", model_options
seed = 1234
np.random.seed(seed)
rng = np.random.RandomState(
seed) #random seed, control the model generates the same results
srng = T.shared_randomstreams.RandomStreams(rng.randint(seed))
"load raw data"
all_sentences_l, all_masks_l, all_sentences_r, all_masks_r, all_labels, word2id = load_SNLI_dataset(
maxlen=maxSentLen
) #minlen, include one label, at least one word in the sentence
train_sents_l = np.asarray(all_sentences_l[0], dtype='int32')
dev_sents_l = np.asarray(all_sentences_l[1], dtype='int32')
test_sents_l = np.asarray(all_sentences_l[2], dtype='int32')
train_masks_l = np.asarray(all_masks_l[0], dtype=theano.config.floatX)
dev_masks_l = np.asarray(all_masks_l[1], dtype=theano.config.floatX)
test_masks_l = np.asarray(all_masks_l[2], dtype=theano.config.floatX)
train_sents_r = np.asarray(all_sentences_r[0], dtype='int32')
dev_sents_r = np.asarray(all_sentences_r[1], dtype='int32')
test_sents_r = np.asarray(all_sentences_r[2], dtype='int32')
train_masks_r = np.asarray(all_masks_r[0], dtype=theano.config.floatX)
dev_masks_r = np.asarray(all_masks_r[1], dtype=theano.config.floatX)
test_masks_r = np.asarray(all_masks_r[2], dtype=theano.config.floatX)
train_labels_store = np.asarray(all_labels[0], dtype='int32')
dev_labels_store = np.asarray(all_labels[1], dtype='int32')
test_labels_store = np.asarray(all_labels[2], dtype='int32')
train_size = len(train_labels_store)
dev_size = len(dev_labels_store)
test_size = len(test_labels_store)
print 'train size: ', train_size, ' dev size: ', dev_size, ' test size: ', test_size
vocab_size = len(word2id) + 1
"first randomly initialize each word in the matrix 'rand_values', then load pre-trained word2vec embeddinds to initialize words, uncovered"
"words keep random initialization"
rand_values = rng.normal(
0.0, 0.01,
(vocab_size, emb_size)) #generate a matrix by Gaussian distribution
id2word = {y: x for x, y in word2id.iteritems()}
word2vec = load_word2vec()
rand_values = load_word2vec_to_init(rand_values, id2word, word2vec)
init_embeddings = theano.shared(
value=np.array(rand_values, dtype=theano.config.floatX), borrow=True
) #wrap up the python variable "rand_values" into theano variable
"now, start to build the input form of the model"
sents_ids_l = T.imatrix()
sents_mask_l = T.fmatrix()
sents_ids_r = T.imatrix()
sents_mask_r = T.fmatrix()
labels = T.ivector()
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
'Use word ids in sentences to retrieve word embeddings from matrix "init_embeddings", each sentence will be in'
'tensor2 (emb_size, sen_length), then the minibatch will be in tensor3 (batch_size, emb_size, sen_length) '
embed_input_l = init_embeddings[sents_ids_l.flatten(
)].reshape((batch_size, maxSentLen, emb_size)).dimshuffle(
0, 2, 1
) #embed_input(init_embeddings, sents_ids_l)#embeddings[sents_ids_l.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1) #the input format can be adapted into CNN or GRU or LSTM
embed_input_r = init_embeddings[sents_ids_r.flatten()].reshape(
(batch_size, maxSentLen, emb_size)).dimshuffle(0, 2, 1)
'''create parameters for attentive convolution function '''
conv_W, conv_b = create_conv_para(rng,
filter_shape=(hidden_size[0], 1,
emb_size, filter_size[0]))
conv_W_context, conv_b_context = create_conv_para(
rng, filter_shape=(hidden_size[0], 1, emb_size, 1))
NN_para = [conv_W, conv_b, conv_W_context]
'''
attentive convolution function
'''
attentive_conv_layer = Attentive_Conv_for_Pair_easy_version(
rng,
input_tensor3=embed_input_l,
input_tensor3_r=embed_input_r,
mask_matrix=sents_mask_l,
mask_matrix_r=sents_mask_r,
image_shape=(batch_size, 1, emb_size, maxSentLen),
image_shape_r=(batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[0], 1, emb_size, 1),
W=conv_W,
b=conv_b,
W_context=conv_W_context,
b_context=conv_b_context)
attentive_sent_embeddings_l = attentive_conv_layer.attentive_maxpool_vec_l
attentive_sent_embeddings_r = attentive_conv_layer.attentive_maxpool_vec_r
"Logistic Regression layer"
LR_input = T.concatenate([
attentive_sent_embeddings_l, attentive_sent_embeddings_r,
attentive_sent_embeddings_l + attentive_sent_embeddings_r,
attentive_sent_embeddings_l * attentive_sent_embeddings_r
],
axis=1)
LR_input_size = 4 * hidden_size[0]
U_a = create_ensemble_para(rng, 3, LR_input_size) # (input_size, 3)
LR_b = theano.shared(value=np.zeros((3, ), dtype=theano.config.floatX),
name='LR_b',
borrow=True) #bias for each target class
LR_para = [U_a, LR_b]
layer_LR = LogisticRegression(
rng,
input=normalize_matrix_col_wise(LR_input),
n_in=LR_input_size,
n_out=3,
W=U_a,
b=LR_b
) #basically it is a multiplication between weight matrix and input feature vector
loss = layer_LR.negative_log_likelihood(
labels
) #for classification task, we usually used negative log likelihood as loss, the lower the better.
params = [init_embeddings] + NN_para + LR_para
cost = loss
"Use AdaGrad to update parameters"
updates = Gradient_Cost_Para(cost, params, learning_rate)
train_model = theano.function(
[sents_ids_l, sents_mask_l, sents_ids_r, sents_mask_r, labels],
cost,
updates=updates,
allow_input_downcast=True,
on_unused_input='ignore')
dev_model = theano.function(
[sents_ids_l, sents_mask_l, sents_ids_r, sents_mask_r, labels],
layer_LR.errors(labels),
allow_input_downcast=True,
on_unused_input='ignore')
test_model = theano.function(
[sents_ids_l, sents_mask_l, sents_ids_r, sents_mask_r, labels],
layer_LR.errors(labels),
allow_input_downcast=True,
on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 50000000000 # look as this many examples regardless
start_time = time.time()
mid_time = start_time
past_time = mid_time
epoch = 0
done_looping = False
n_train_batches = train_size / batch_size
train_batch_start = list(
np.arange(n_train_batches) * batch_size) + [train_size - batch_size]
n_dev_batches = dev_size / batch_size
dev_batch_start = list(
np.arange(n_dev_batches) * batch_size) + [dev_size - batch_size]
n_test_batches = test_size / batch_size
test_batch_start = list(
np.arange(n_test_batches) * batch_size) + [test_size - batch_size]
max_acc_dev = 0.0
max_acc_test = 0.0
cost_i = 0.0
train_indices = range(train_size)
while epoch < n_epochs:
epoch = epoch + 1
random.Random(100).shuffle(
train_indices
) #shuffle training set for each new epoch, is supposed to promote performance, but not garrenteed
iter_accu = 0
for batch_id in train_batch_start: #for each batch
# iter means how many batches have been run, taking into loop
iter = (epoch - 1) * n_train_batches + iter_accu + 1
iter_accu += 1
train_id_batch = train_indices[batch_id:batch_id + batch_size]
cost_i += train_model(train_sents_l[train_id_batch],
train_masks_l[train_id_batch],
train_sents_r[train_id_batch],
train_masks_r[train_id_batch],
train_labels_store[train_id_batch])
#after each 1000 batches, we test the performance of the model on all test data
# if (epoch==1 and iter%1000==0) or (epoch>=2 and iter%5==0):
if iter % 1000 == 0:
print 'Epoch ', epoch, 'iter ' + str(
iter) + ' average cost: ' + str(cost_i / iter), 'uses ', (
time.time() - past_time) / 60.0, 'min'
past_time = time.time()
'''
test
'''
error_sum = 0.0
for test_batch_id in test_batch_start: # for each test batch
error_i = test_model(
test_sents_l[test_batch_id:test_batch_id + batch_size],
test_masks_l[test_batch_id:test_batch_id + batch_size],
test_sents_r[test_batch_id:test_batch_id + batch_size],
test_masks_r[test_batch_id:test_batch_id + batch_size],
test_labels_store[test_batch_id:test_batch_id +
batch_size])
error_sum += error_i
test_acc = 1.0 - error_sum / (len(test_batch_start))
if test_acc > max_acc_test:
max_acc_test = test_acc
print '\t\tcurrent test_acc:', test_acc, ' ; ', '\t\t\t\t\tmax_test_acc:', max_acc_test
print 'Epoch ', epoch, 'uses ', (time.time() - mid_time) / 60.0, 'min'
mid_time = time.time()
#print 'Batch_size: ', update_freq
end_time = time.time()
print >> sys.stderr, ('The code for file ' + os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
return max_acc_test
def evaluate_lenet5(learning_rate=0.01, n_epochs=2000, batch_size=100, emb_size=300, char_emb_size=20, hidden_size=300,
L2_weight=0.0001, p_len_limit=400, test_p_len_limit=100, q_len_limit=20, char_len=15, filter_size = [5,5],
char_filter_size=3, margin=2.0, max_EM=50.302743615):
test_batch_size=batch_size*10
model_options = locals().copy()
print "model options", model_options
rootPath='/mounts/data/proj/wenpeng/Dataset/SQuAD/';
rng = numpy.random.RandomState(23455)
word2id={}
char2id={}
#questions,paragraphs,q_masks,p_masks,labels, word2id
train_Q_list,train_para_list, train_Q_mask, train_para_mask, train_Q_char_list,train_para_char_list, train_Q_char_mask, train_para_char_mask, train_label_list, word2id, char2id=load_squad_cnn_rank_word_train(word2id, char2id, p_len_limit, q_len_limit, char_len)
train_size=len(train_para_list)
test_Q_list, test_para_list, test_Q_mask, test_para_mask,test_Q_char_list, test_para_char_list, test_Q_char_mask, test_para_char_mask, test_label_list, q_idlist, word2id, char2id, test_para_wordlist_list= load_squad_cnn_rank_word_dev(word2id, char2id, test_p_len_limit, q_len_limit, char_len)
test_size=len(test_para_list)
train_Q_list = numpy.asarray(train_Q_list, dtype='int32')
train_para_list = numpy.asarray(train_para_list, dtype='int32')
train_Q_mask = numpy.asarray(train_Q_mask, dtype=theano.config.floatX)
train_para_mask = numpy.asarray(train_para_mask, dtype=theano.config.floatX)
train_Q_char_list = numpy.asarray(train_Q_char_list, dtype='int32')
train_para_char_list = numpy.asarray(train_para_char_list, dtype='int32')
train_Q_char_mask = numpy.asarray(train_Q_char_mask, dtype=theano.config.floatX)
train_para_char_mask = numpy.asarray(train_para_char_mask, dtype=theano.config.floatX)
train_label_list = numpy.asarray(train_label_list, dtype='int32')
test_Q_list = numpy.asarray(test_Q_list, dtype='int32')
test_para_list = numpy.asarray(test_para_list, dtype='int32')
test_Q_mask = numpy.asarray(test_Q_mask, dtype=theano.config.floatX)
test_para_mask = numpy.asarray(test_para_mask, dtype=theano.config.floatX)
test_Q_char_list = numpy.asarray(test_Q_char_list, dtype='int32')
test_para_char_list = numpy.asarray(test_para_char_list, dtype='int32')
test_Q_char_mask = numpy.asarray(test_Q_char_mask, dtype=theano.config.floatX)
test_para_char_mask = numpy.asarray(test_para_char_mask, dtype=theano.config.floatX)
vocab_size = len(word2id)
print 'vocab size: ', vocab_size
rand_values=random_value_normal((vocab_size+1, emb_size), theano.config.floatX, rng)
rand_values[0]=numpy.array(numpy.zeros(emb_size),dtype=theano.config.floatX)
id2word = {y:x for x,y in word2id.iteritems()}
word2vec=load_glove()
rand_values=load_word2vec_to_init(rand_values, id2word, word2vec)
embeddings=theano.shared(value=rand_values, borrow=True)
char_size = len(char2id)
print 'char size: ', char_size
char_rand_values=random_value_normal((char_size+1, char_emb_size), theano.config.floatX, rng)
char_embeddings=theano.shared(value=char_rand_values, borrow=True)
# allocate symbolic variables for the data
# index = T.lscalar()
paragraph = T.imatrix('paragraph')
questions = T.imatrix('questions')
gold_indices= T.imatrix() #batch, (start, end) for each sample
para_mask=T.fmatrix('para_mask')
q_mask=T.fmatrix('q_mask')
char_paragraph = T.imatrix() #(batch, char_len*p_len)
char_questions = T.imatrix()
char_para_mask=T.fmatrix()
char_q_mask=T.fmatrix()
true_p_len = T.iscalar()
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
true_batch_size = paragraph.shape[0]
common_input_p=embeddings[paragraph.flatten()].reshape((true_batch_size,true_p_len, emb_size)) #the input format can be adapted into CNN or GRU or LSTM
common_input_q=embeddings[questions.flatten()].reshape((true_batch_size,q_len_limit, emb_size))
char_common_input_p=char_embeddings[char_paragraph.flatten()].reshape((true_batch_size*true_p_len, char_len, char_emb_size)) #the input format can be adapted into CNN or GRU or LSTM
char_common_input_q=char_embeddings[char_questions.flatten()].reshape((true_batch_size*q_len_limit, char_len, char_emb_size))
char_p_masks = char_para_mask.reshape((true_batch_size*true_p_len, char_len))
char_q_masks = char_q_mask.reshape((true_batch_size*q_len_limit, char_len))
conv_W_char, conv_b_char=create_conv_para(rng, filter_shape=(char_emb_size, 1, char_emb_size, char_filter_size))
conv_W_1, conv_b_1=create_conv_para(rng, filter_shape=(hidden_size, 1, emb_size+char_emb_size, filter_size[0]))
conv_W_2, conv_b_2=create_conv_para(rng, filter_shape=(hidden_size, 1, hidden_size, filter_size[1]))
conv_W_1_q, conv_b_1_q=create_conv_para(rng, filter_shape=(hidden_size, 1, emb_size+char_emb_size, filter_size[0]))
conv_W_2_q, conv_b_2_q=create_conv_para(rng, filter_shape=(hidden_size, 1, hidden_size, filter_size[1]))
NN_para=[conv_W_1, conv_b_1,conv_W_2, conv_b_2,conv_W_1_q, conv_b_1_q, conv_W_2_q, conv_b_2_q, conv_W_char, conv_b_char]
input4score = squad_cnn_rank_word(rng, common_input_p, common_input_q, char_common_input_p, char_common_input_q,batch_size, p_len_limit,q_len_limit,
emb_size, char_emb_size,char_len,filter_size,char_filter_size,hidden_size,
conv_W_1, conv_b_1,conv_W_2, conv_b_2,conv_W_1_q, conv_b_1_q, conv_W_2_q, conv_b_2_q,conv_W_char,conv_b_char,
para_mask, q_mask, char_p_masks,char_q_masks)
test_input4score = squad_cnn_rank_word(rng, common_input_p, common_input_q, char_common_input_p, char_common_input_q,test_batch_size, test_p_len_limit,q_len_limit,
emb_size, char_emb_size,char_len,filter_size,char_filter_size,hidden_size,
conv_W_1, conv_b_1,conv_W_2, conv_b_2, conv_W_1_q, conv_b_1_q, conv_W_2_q, conv_b_2_q,conv_W_char,conv_b_char,
para_mask, q_mask, char_p_masks,char_q_masks) #(batch, hidden, #(batch, 2*hidden, p_len_limit))
# gram_size = 5*true_p_len-(0+1+2+3+4)
HL_1_para = create_ensemble_para(rng, hidden_size, 2*hidden_size)
HL_2_para = create_ensemble_para(rng, hidden_size, hidden_size)
HL_3_para = create_ensemble_para(rng, hidden_size, hidden_size)
HL_4_para = create_ensemble_para(rng, hidden_size, hidden_size)
U_a = create_ensemble_para(rng, 1, hidden_size)
norm_U_a=normalize_matrix(U_a)
norm_HL_1_para=normalize_matrix(HL_1_para)
norm_HL_2_para=normalize_matrix(HL_2_para)
norm_HL_3_para=normalize_matrix(HL_3_para)
norm_HL_4_para=normalize_matrix(HL_4_para)
end_HL_1_para = create_ensemble_para(rng, hidden_size, 2*hidden_size)
end_HL_2_para = create_ensemble_para(rng, hidden_size, hidden_size)
end_HL_3_para = create_ensemble_para(rng, hidden_size, hidden_size)
end_HL_4_para = create_ensemble_para(rng, hidden_size, hidden_size)
end_U_a = create_ensemble_para(rng, 1, hidden_size)
end_norm_U_a=normalize_matrix(end_U_a)
end_norm_HL_1_para=normalize_matrix(end_HL_1_para)
end_norm_HL_2_para=normalize_matrix(end_HL_2_para)
end_norm_HL_3_para=normalize_matrix(end_HL_3_para)
end_norm_HL_4_para=normalize_matrix(end_HL_4_para)
span_scores_matrix = add_HLs_2_tensor3(input4score, norm_HL_1_para,norm_HL_2_para,norm_HL_3_para,norm_HL_4_para, norm_U_a, batch_size,true_p_len)
span_scores=T.nnet.softmax(span_scores_matrix) #(batch, para_len)
end_span_scores_matrix = add_HLs_2_tensor3(input4score, end_norm_HL_1_para,end_norm_HL_2_para,end_norm_HL_3_para,end_norm_HL_4_para, end_norm_U_a, batch_size,true_p_len)
end_span_scores=T.nnet.softmax(end_span_scores_matrix) #(batch, para_len)
loss_neg_likelihood=-T.mean(T.log(span_scores[T.arange(batch_size), gold_indices[:,0]]))
end_loss_neg_likelihood=-T.mean(T.log(span_scores[T.arange(batch_size), gold_indices[:,1]]))
#ranking loss start
tanh_span_scores_matrix = span_scores#T.tanh(span_scores_matrix) #(batch, gram_size)
index_matrix = T.zeros((batch_size, p_len_limit), dtype=theano.config.floatX)
new_index_matrix = T.set_subtensor(index_matrix[T.arange(batch_size), gold_indices[:,0]], 1.0)
prob_batch_posi = tanh_span_scores_matrix[new_index_matrix.nonzero()]
prob_batch_nega = tanh_span_scores_matrix[(1.0-new_index_matrix).nonzero()]
repeat_posi = T.extra_ops.repeat(prob_batch_posi, prob_batch_nega.shape[0], axis=0)
repeat_nega = T.extra_ops.repeat(prob_batch_nega.dimshuffle('x',0), prob_batch_posi.shape[0], axis=0).flatten()
loss_rank = T.mean(T.maximum(0.0, margin-repeat_posi+repeat_nega))
#ranking loss END
end_tanh_span_scores_matrix = end_span_scores#T.tanh(span_scores_matrix) #(batch, gram_size)
end_index_matrix = T.zeros((batch_size, p_len_limit), dtype=theano.config.floatX)
end_new_index_matrix = T.set_subtensor(end_index_matrix[T.arange(batch_size), gold_indices[:,1]], 1.0)
end_prob_batch_posi = end_tanh_span_scores_matrix[end_new_index_matrix.nonzero()]
end_prob_batch_nega = end_tanh_span_scores_matrix[(1.0-end_new_index_matrix).nonzero()]
end_repeat_posi = T.extra_ops.repeat(end_prob_batch_posi, end_prob_batch_nega.shape[0], axis=0)
end_repeat_nega = T.extra_ops.repeat(end_prob_batch_nega.dimshuffle('x',0), end_prob_batch_posi.shape[0], axis=0).flatten()
end_loss_rank = T.mean(T.maximum(0.0, margin-end_repeat_posi+end_repeat_nega))
loss = loss_neg_likelihood +end_loss_neg_likelihood+loss_rank+end_loss_rank
#test
test_span_scores_matrix = add_HLs_2_tensor3(test_input4score, norm_HL_1_para,norm_HL_2_para,norm_HL_3_para,norm_HL_4_para,norm_U_a, true_batch_size,true_p_len) #(batch, test_p_len)
mask_test_return=T.argmax(test_span_scores_matrix*para_mask, axis=1) #batch
end_test_span_scores_matrix = add_HLs_2_tensor3(test_input4score, end_norm_HL_1_para,end_norm_HL_2_para,end_norm_HL_3_para,end_norm_HL_4_para,end_norm_U_a, true_batch_size,true_p_len) #(batch, test_p_len)
end_mask_test_return=T.argmax(end_test_span_scores_matrix*para_mask, axis=1) #batch
params = [embeddings,char_embeddings]+NN_para+[U_a,HL_1_para,HL_2_para,HL_3_para,HL_4_para]+[end_U_a,end_HL_1_para,end_HL_2_para,end_HL_3_para,end_HL_4_para]
L2_reg =L2norm_paraList([embeddings,char_embeddings,conv_W_1,conv_W_2,conv_W_1_q, conv_W_2_q, conv_W_char,U_a,HL_1_para,HL_2_para,HL_3_para,HL_4_para])
#L2_reg = L2norm_paraList(params)
cost=loss#+L2_weight*L2_reg
accumulator=[]
for para_i in params:
eps_p=numpy.zeros_like(para_i.get_value(borrow=True),dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
# print grad_i.type
acc = acc_i + T.sqr(grad_i)
updates.append((param_i, param_i - learning_rate * grad_i / (T.sqrt(acc)+1e-8))) #AdaGrad
updates.append((acc_i, acc))
# updates=Adam(cost, params, lr=0.0001)
train_model = theano.function([paragraph, questions,gold_indices, para_mask, q_mask, char_paragraph, #(batch, char_len*p_len)
char_questions, char_para_mask, char_q_mask, true_p_len], cost, updates=updates,on_unused_input='ignore')
test_model = theano.function([paragraph, questions,para_mask, q_mask,
char_paragraph,
char_questions,
char_para_mask,
char_q_mask,
true_p_len], [mask_test_return,end_mask_test_return], on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
best_params = None
best_validation_loss = numpy.inf
best_iter = 0
test_score = 0.
start_time = time.time()
mid_time = start_time
past_time= mid_time
epoch = 0
done_looping = False
#para_list, Q_list, label_list, mask, vocab_size=load_train()
n_train_batches=train_size/batch_size
# remain_train=train_size%batch_size
train_batch_start=list(numpy.arange(n_train_batches)*batch_size)+[train_size-batch_size]
n_test_batches=test_size/test_batch_size
# remain_test=test_size%batch_size
test_batch_start=list(numpy.arange(n_test_batches)*test_batch_size)+[test_size-test_batch_size]
max_F1_acc=0.0
max_exact_acc=0.0
cost_i=0.0
train_ids = range(train_size)
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
random.shuffle(train_ids)
iter_accu=0
for para_id in train_batch_start:
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * n_train_batches + iter_accu +1
iter_accu+=1
train_id_batch = train_ids[para_id:para_id+batch_size]
cost_i+= train_model(
train_para_list[train_id_batch],
train_Q_list[train_id_batch],
train_label_list[train_id_batch],
train_para_mask[train_id_batch],
train_Q_mask[train_id_batch],
train_para_char_list[train_id_batch],
train_Q_char_list[train_id_batch],
train_para_char_mask[train_id_batch],
train_Q_char_mask[train_id_batch],
p_len_limit)
#print iter
if iter%100==0:
print 'Epoch ', epoch, 'iter '+str(iter)+' average cost: '+str(cost_i/iter), 'uses ', (time.time()-past_time)/60.0, 'min'
print 'Testing...'
past_time = time.time()
pred_dict={}
q_amount=0
p1=0
for test_para_id in test_batch_start:
batch_predict_ids, batch_predict_end_ids=test_model(
test_para_list[test_para_id:test_para_id+test_batch_size],
test_Q_list[test_para_id:test_para_id+test_batch_size],
test_para_mask[test_para_id:test_para_id+test_batch_size],
test_Q_mask[test_para_id:test_para_id+test_batch_size],
test_para_char_list[test_para_id:test_para_id+test_batch_size],
test_Q_char_list[test_para_id:test_para_id+test_batch_size],
test_para_char_mask[test_para_id:test_para_id+test_batch_size],
test_Q_char_mask[test_para_id:test_para_id+test_batch_size],
test_p_len_limit)
test_para_wordlist_batch=test_para_wordlist_list[test_para_id:test_para_id+test_batch_size]
# test_label_batch=test_label_list[test_para_id:test_para_id+test_batch_size]
# q_amount+=test_batch_size
q_ids_batch=q_idlist[test_para_id:test_para_id+test_batch_size]
q_amount+=test_batch_size
for q in range(test_batch_size): #for each question
# pred_ans=decode_predict_id(batch_predict_ids[q], test_para_wordlist_batch[q])
start = batch_predict_ids[q]
end = batch_predict_end_ids[q]
if end < start:
start, end = end, start
pred_ans = ' '.join(test_para_wordlist_batch[q][start:end+1])
q_id=q_ids_batch[q]
pred_dict[q_id]=pred_ans
with codecs.open(rootPath+'predictions.txt', 'w', 'utf-8') as outfile:
json.dump(pred_dict, outfile)
F1_acc, exact_acc = standard_eval(rootPath+'dev-v1.1.json', rootPath+'predictions.txt')
if F1_acc> max_F1_acc:
max_F1_acc=F1_acc
if exact_acc> max_exact_acc:
max_exact_acc=exact_acc
# if max_exact_acc > max_EM:
# store_model_to_file(rootPath+'Best_Paras_google_'+str(max_exact_acc), params)
# print 'Finished storing best params at:', max_exact_acc
print 'current average F1:', F1_acc, '\t\tmax F1:', max_F1_acc, 'current exact:', exact_acc, '\t\tmax exact_acc:', max_exact_acc
if patience <= iter:
done_looping = True
break
print 'Epoch ', epoch, 'uses ', (time.time()-mid_time)/60.0, 'min'
mid_time = time.time()
#print 'Batch_size: ', update_freq
end_time = time.time()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' +
os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(learning_rate=0.01,
n_epochs=100,
emb_size=40,
batch_size=50,
describ_max_len=20,
type_size=12,
filter_size=[3, 5],
maxSentLen=100,
hidden_size=[300, 300]):
model_options = locals().copy()
print "model options", model_options
emb_root = '/save/wenpeng/datasets/LORELEI/multi-lingual-emb/'
seed = 1234
np.random.seed(seed)
rng = np.random.RandomState(
seed) #random seed, control the model generates the same results
srng = T.shared_randomstreams.RandomStreams(rng.randint(seed))
all_sentences, all_masks, all_labels, word2id = load_BBN_multi_labels_dataset(
maxlen=maxSentLen
) #minlen, include one label, at least one word in the sentence
label_sent, label_mask = load_SF_type_descriptions(word2id, type_size,
describ_max_len)
label_sent = np.asarray(label_sent, dtype='int32')
label_mask = np.asarray(label_mask, dtype=theano.config.floatX)
train_sents = np.asarray(all_sentences[0], dtype='int32')
train_masks = np.asarray(all_masks[0], dtype=theano.config.floatX)
train_labels = np.asarray(all_labels[0], dtype='int32')
train_size = len(train_labels)
dev_sents = np.asarray(all_sentences[1], dtype='int32')
dev_masks = np.asarray(all_masks[1], dtype=theano.config.floatX)
dev_labels = np.asarray(all_labels[1], dtype='int32')
dev_size = len(dev_labels)
test_sents = np.asarray(all_sentences[2], dtype='int32')
test_masks = np.asarray(all_masks[2], dtype=theano.config.floatX)
test_labels = np.asarray(all_labels[2], dtype='int32')
test_size = len(test_labels)
vocab_size = len(word2id) + 1 # add one zero pad index
rand_values = rng.normal(
0.0, 0.01,
(vocab_size, emb_size)) #generate a matrix by Gaussian distribution
rand_values[0] = np.array(np.zeros(emb_size), dtype=theano.config.floatX)
id2word = {y: x for x, y in word2id.iteritems()}
word2vec = load_fasttext_multiple_word2vec_given_file([
emb_root + 'IL5-cca-wiki-lorelei-d40.eng.vec',
emb_root + 'IL5-cca-wiki-lorelei-d40.IL5.vec'
], 40)
rand_values = load_word2vec_to_init(rand_values, id2word, word2vec)
embeddings = theano.shared(
value=np.array(rand_values, dtype=theano.config.floatX), borrow=True
) #wrap up the python variable "rand_values" into theano variable
#now, start to build the input form of the model
sents_id_matrix = T.imatrix('sents_id_matrix')
sents_mask = T.fmatrix('sents_mask')
labels = T.imatrix('labels') #batch*12
des_id_matrix = T.imatrix()
des_mask = T.fmatrix()
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
common_input = embeddings[sents_id_matrix.flatten()].reshape(
(batch_size, maxSentLen, emb_size)).dimshuffle(
0, 2, 1) #the input format can be adapted into CNN or GRU or LSTM
bow_emb = T.sum(common_input * sents_mask.dimshuffle(0, 'x', 1), axis=2)
# bow_mean_emb = bow_emb/T.sum(sents_mask,axis=1).dimshuffle(0,'x')
des_input = embeddings[des_id_matrix.flatten()].reshape(
(type_size, describ_max_len, emb_size)).dimshuffle(0, 2, 1)
bow_des = T.sum(des_input * des_mask.dimshuffle(0, 'x', 1),
axis=2) #(tyope_size, emb_size)
conv_W, conv_b = create_conv_para(rng,
filter_shape=(hidden_size[0], 1,
emb_size, filter_size[0]))
conv_W2, conv_b2 = create_conv_para(rng,
filter_shape=(hidden_size[0], 1,
emb_size,
filter_size[1]))
multiCNN_para = [conv_W, conv_b, conv_W2, conv_b2]
conv_att_W, conv_att_b = create_conv_para(rng,
filter_shape=(hidden_size[0], 1,
emb_size,
filter_size[0]))
conv_W_context, conv_b_context = create_conv_para(
rng, filter_shape=(hidden_size[0], 1, emb_size, 1))
conv_att_W2, conv_att_b2 = create_conv_para(rng,
filter_shape=(hidden_size[0],
1, emb_size,
filter_size[1]))
conv_W_context2, conv_b_context2 = create_conv_para(
rng, filter_shape=(hidden_size[0], 1, emb_size, 1))
ACNN_para = [
conv_att_W, conv_att_b, conv_W_context, conv_att_W2, conv_att_b2,
conv_W_context2
]
# NN_para = multiCNN_para+ACNN_para
conv_model = Conv_with_Mask(
rng,
input_tensor3=common_input,
mask_matrix=sents_mask,
image_shape=(batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
W=conv_W,
b=conv_b
) #mutiple mask with the conv_out to set the features by UNK to zero
sent_embeddings = conv_model.maxpool_vec #(batch_size, hidden_size) # each sentence then have an embedding of length hidden_size
conv_model2 = Conv_with_Mask(
rng,
input_tensor3=common_input,
mask_matrix=sents_mask,
image_shape=(batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[1]),
W=conv_W2,
b=conv_b2
) #mutiple mask with the conv_out to set the features by UNK to zero
sent_embeddings2 = conv_model2.maxpool_vec #(batch_size, hidden_size) # each sentence then have an embedding of length hidden_size
LR_input = T.concatenate([sent_embeddings, sent_embeddings2, bow_emb],
axis=1)
LR_input_size = hidden_size[0] * 2 + emb_size
#classification layer, it is just mapping from a feature vector of size "hidden_size" to a vector of only two values: positive, negative
U_a = create_ensemble_para(
rng, 12, LR_input_size) # the weight matrix hidden_size*2
LR_b = theano.shared(value=np.zeros((12, ), dtype=theano.config.floatX),
name='LR_b',
borrow=True) #bias for each target class
LR_para = [U_a, LR_b]
layer_LR = LogisticRegression(
rng, input=LR_input, n_in=LR_input_size, n_out=12, W=U_a, b=LR_b
) #basically it is a multiplication between weight matrix and input feature vector
score_matrix = T.nnet.sigmoid(layer_LR.before_softmax) #batch * 12
prob_pos = T.where(labels < 1, 1.0 - score_matrix, score_matrix)
loss = -T.mean(T.log(prob_pos))
'''
GRU
'''
U1, W1, b1 = create_GRU_para(rng, emb_size, hidden_size[0])
GRU_NN_para = [
U1, W1, b1
] #U1 includes 3 matrices, W1 also includes 3 matrices b1 is bias
# gru_input = common_input.dimshuffle((0,2,1)) #gru requires input (batch_size, emb_size, maxSentLen)
gru_layer = GRU_Batch_Tensor_Input_with_Mask(common_input, sents_mask,
hidden_size[0], U1, W1, b1)
gru_sent_embeddings = gru_layer.output_sent_rep # (batch_size, hidden_size)
LR_att_input = T.concatenate([gru_sent_embeddings, bow_emb], axis=1)
LR_att_input_size = hidden_size[0] + emb_size
#classification layer, it is just mapping from a feature vector of size "hidden_size" to a vector of only two values: positive, negative
U_att_a = create_ensemble_para(
rng, 12, LR_att_input_size) # the weight matrix hidden_size*2
LR_att_b = theano.shared(value=np.zeros((12, ),
dtype=theano.config.floatX),
name='LR_b',
borrow=True) #bias for each target class
LR_att_para = [U_att_a, LR_att_b]
layer_att_LR = LogisticRegression(
rng,
input=LR_att_input,
n_in=LR_att_input_size,
n_out=12,
W=U_att_a,
b=LR_att_b
) #basically it is a multiplication between weight matrix and input feature vector
att_score_matrix = T.nnet.sigmoid(layer_att_LR.before_softmax) #batch * 12
att_prob_pos = T.where(labels < 1, 1.0 - att_score_matrix,
att_score_matrix)
att_loss = -T.mean(T.log(att_prob_pos))
'''
ACNN
'''
attentive_conv_layer = Attentive_Conv_for_Pair(
rng,
origin_input_tensor3=common_input,
origin_input_tensor3_r=common_input,
input_tensor3=common_input,
input_tensor3_r=common_input,
mask_matrix=sents_mask,
mask_matrix_r=sents_mask,
image_shape=(batch_size, 1, emb_size, maxSentLen),
image_shape_r=(batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[0], 1, emb_size, 1),
W=conv_att_W,
b=conv_att_b,
W_context=conv_W_context,
b_context=conv_b_context)
sent_att_embeddings = attentive_conv_layer.attentive_maxpool_vec_l
attentive_conv_layer2 = Attentive_Conv_for_Pair(
rng,
origin_input_tensor3=common_input,
origin_input_tensor3_r=common_input,
input_tensor3=common_input,
input_tensor3_r=common_input,
mask_matrix=sents_mask,
mask_matrix_r=sents_mask,
image_shape=(batch_size, 1, emb_size, maxSentLen),
image_shape_r=(batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[1]),
filter_shape_context=(hidden_size[0], 1, emb_size, 1),
W=conv_att_W2,
b=conv_att_b2,
W_context=conv_W_context2,
b_context=conv_b_context2)
sent_att_embeddings2 = attentive_conv_layer2.attentive_maxpool_vec_l
acnn_LR_input = T.concatenate(
[sent_att_embeddings, sent_att_embeddings2, bow_emb], axis=1)
acnn_LR_input_size = hidden_size[0] * 2 + emb_size
#classification layer, it is just mapping from a feature vector of size "hidden_size" to a vector of only two values: positive, negative
acnn_U_a = create_ensemble_para(
rng, 12, acnn_LR_input_size) # the weight matrix hidden_size*2
acnn_LR_b = theano.shared(value=np.zeros((12, ),
dtype=theano.config.floatX),
name='LR_b',
borrow=True) #bias for each target class
acnn_LR_para = [acnn_U_a, acnn_LR_b]
acnn_layer_LR = LogisticRegression(
rng,
input=acnn_LR_input,
n_in=acnn_LR_input_size,
n_out=12,
W=acnn_U_a,
b=acnn_LR_b
) #basically it is a multiplication between weight matrix and input feature vector
acnn_score_matrix = T.nnet.sigmoid(
acnn_layer_LR.before_softmax) #batch * 12
acnn_prob_pos = T.where(labels < 1, 1.0 - acnn_score_matrix,
acnn_score_matrix)
acnn_loss = -T.mean(T.log(acnn_prob_pos))
'''
dataless cosine
'''
cosine_scores = normalize_matrix_rowwise(bow_emb).dot(
normalize_matrix_rowwise(bow_des).T)
cosine_score_matrix = T.nnet.sigmoid(
cosine_scores) #(batch_size, type_size)
params = multiCNN_para + LR_para + GRU_NN_para + LR_att_para + ACNN_para + acnn_LR_para # put all model parameters together
cost = loss + att_loss + acnn_loss + 1e-4 * ((conv_W**2).sum() +
(conv_W2**2).sum())
updates = Gradient_Cost_Para(cost, params, learning_rate)
'''
testing
'''
ensemble_NN_scores = T.max(T.concatenate([
att_score_matrix.dimshuffle('x', 0, 1),
score_matrix.dimshuffle('x', 0, 1),
acnn_score_matrix.dimshuffle('x', 0, 1)
],
axis=0),
axis=0)
ensemble_scores = 0.5 * ensemble_NN_scores + 0.5 * cosine_score_matrix
binarize_prob = T.where(ensemble_scores > 0.3, 1, 0)
#train_model = theano.function([sents_id_matrix, sents_mask, labels], cost, updates=updates, on_unused_input='ignore')
train_model = theano.function(
[sents_id_matrix, sents_mask, labels, des_id_matrix, des_mask],
cost,
updates=updates,
allow_input_downcast=True,
on_unused_input='ignore')
# dev_model = theano.function([sents_id_matrix, sents_mask, labels], layer_LR.errors(labels), allow_input_downcast=True, on_unused_input='ignore')
test_model = theano.function(
[sents_id_matrix, sents_mask, des_id_matrix, des_mask],
binarize_prob,
allow_input_downcast=True,
on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 50000000000 # look as this many examples regardless
start_time = time.time()
mid_time = start_time
past_time = mid_time
epoch = 0
done_looping = False
n_train_batches = train_size / batch_size
train_batch_start = list(
np.arange(n_train_batches) * batch_size) + [train_size - batch_size]
# n_dev_batches=dev_size/batch_size
# dev_batch_start=list(np.arange(n_dev_batches)*batch_size)+[dev_size-batch_size]
n_test_batches = test_size / batch_size
test_batch_start = list(
np.arange(n_test_batches) * batch_size) + [test_size - batch_size]
# max_acc_dev=0.0
max_meanf1_test = 0.0
max_weightf1_test = 0.0
train_indices = range(train_size)
cost_i = 0.0
while epoch < n_epochs:
epoch = epoch + 1
random.Random(100).shuffle(train_indices)
iter_accu = 0
for batch_id in train_batch_start: #for each batch
# iter means how many batches have been run, taking into loop
iter = (epoch - 1) * n_train_batches + iter_accu + 1
iter_accu += 1
train_id_batch = train_indices[batch_id:batch_id + batch_size]
cost_i += train_model(train_sents[train_id_batch],
train_masks[train_id_batch],
train_labels[train_id_batch], label_sent,
label_mask)
#after each 1000 batches, we test the performance of the model on all test data
if iter % 20 == 0:
print 'Epoch ', epoch, 'iter ' + str(
iter) + ' average cost: ' + str(cost_i / iter), 'uses ', (
time.time() - past_time) / 60.0, 'min'
past_time = time.time()
error_sum = 0.0
all_pred_labels = []
all_gold_labels = []
for test_batch_id in test_batch_start: # for each test batch
pred_labels = test_model(
test_sents[test_batch_id:test_batch_id + batch_size],
test_masks[test_batch_id:test_batch_id + batch_size],
label_sent, label_mask)
gold_labels = test_labels[test_batch_id:test_batch_id +
batch_size]
# print 'pred_labels:', pred_labels
# print 'gold_labels;', gold_labels
all_pred_labels.append(pred_labels)
all_gold_labels.append(gold_labels)
all_pred_labels = np.concatenate(all_pred_labels)
all_gold_labels = np.concatenate(all_gold_labels)
test_mean_f1, test_weight_f1 = average_f1_two_array_by_col(
all_pred_labels, all_gold_labels)
if test_weight_f1 > max_weightf1_test:
max_weightf1_test = test_weight_f1
if test_mean_f1 > max_meanf1_test:
max_meanf1_test = test_mean_f1
print '\t\t\t\t\t\t\t\tcurrent f1s:', test_mean_f1, test_weight_f1, '\t\tmax_f1:', max_meanf1_test, max_weightf1_test
print 'Epoch ', epoch, 'uses ', (time.time() - mid_time) / 60.0, 'min'
mid_time = time.time()
#print 'Batch_size: ', update_freq
end_time = time.time()
print >> sys.stderr, ('The code for file ' + os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(learning_rate=0.02,
n_epochs=4,
L2_weight=1e-5,
extra_size=4,
emb_size=300,
batch_size=100,
filter_size=[3, 3],
maxSentLen=40,
hidden_size=[300, 300],
max_term_len=4,
p_mode='conc'):
model_options = locals().copy()
print "model options", model_options
seed = 1234
np.random.seed(seed)
rng = np.random.RandomState(
seed) #random seed, control the model generates the same results
all_sentences_l, all_masks_l, all_sentences_r, all_masks_r, all_word1, all_word2, all_word1_mask, all_word2_mask, all_labels, all_extra, word2id = load_wordnet_hyper_vs_all_with_words(
maxlen=maxSentLen, wordlen=max_term_len
) #minlen, include one label, at least one word in the sentence
# test_sents_l, test_masks_l, test_sents_r, test_masks_r, test_labels, word2id =load_ACE05_dataset(maxSentLen, word2id)
test_sents_l, test_masks_l, test_sents_r, test_masks_r, test_word1, test_word2, test_word1_mask, test_word2_mask, test_labels, test_extra, word2id = load_task_hyper_vs_all_with_words(
LenciBenotto_file, maxSentLen, word2id, wordlen=max_term_len)
store_word2id(word2id, root_dic + 'LenciBenotto_word2id.pkl')
# exit(0)
total_size = len(all_sentences_l)
hold_test_size = 10000
train_size = total_size - hold_test_size
train_sents_l = np.asarray(all_sentences_l[:train_size], dtype='int32')
# dev_sents_l=np.asarray(all_sentences_l[1], dtype='int32')
# test_sents_l=np.asarray(all_sentences_l[-test_size:], dtype='int32')
test_sents_l = np.asarray(test_sents_l, dtype='int32')
train_masks_l = np.asarray(all_masks_l[:train_size],
dtype=theano.config.floatX)
# dev_masks_l=np.asarray(all_masks_l[1], dtype=theano.config.floatX)
# test_masks_l=np.asarray(all_masks_l[-test_size:], dtype=theano.config.floatX)
test_masks_l = np.asarray(test_masks_l, dtype=theano.config.floatX)
train_sents_r = np.asarray(all_sentences_r[:train_size], dtype='int32')
# dev_sents_r=np.asarray(all_sentences_r[1] , dtype='int32')
# test_sents_r=np.asarray(all_sentences_r[-test_size:], dtype='int32')
test_sents_r = np.asarray(test_sents_r, dtype='int32')
train_masks_r = np.asarray(all_masks_r[:train_size],
dtype=theano.config.floatX)
# dev_masks_r=np.asarray(all_masks_r[1], dtype=theano.config.floatX)
# test_masks_r=np.asarray(all_masks_r[-test_size:], dtype=theano.config.floatX)
test_masks_r = np.asarray(test_masks_r, dtype=theano.config.floatX)
train_word1 = np.asarray(all_word1[:train_size], dtype='int32')
train_word2 = np.asarray(all_word2[:train_size], dtype='int32')
test_word1 = np.asarray(test_word1, dtype='int32')
test_word2 = np.asarray(test_word2, dtype='int32')
train_word1_mask = np.asarray(all_word1_mask[:train_size],
dtype=theano.config.floatX)
train_word2_mask = np.asarray(all_word2_mask[:train_size],
dtype=theano.config.floatX)
test_word1_mask = np.asarray(test_word1_mask, dtype=theano.config.floatX)
test_word2_mask = np.asarray(test_word2_mask, dtype=theano.config.floatX)
train_labels_store = np.asarray(all_labels[:train_size], dtype='int32')
# dev_labels_store=np.asarray(all_labels[1], dtype='int32')
# test_labels_store=np.asarray(all_labels[-test_size:], dtype='int32')
test_labels_store = np.asarray(test_labels, dtype='int32')
train_extra = np.asarray(all_extra[:train_size],
dtype=theano.config.floatX)
test_extra = np.asarray(test_extra, dtype=theano.config.floatX)
# train_size=len(train_labels_store)
# dev_size=len(dev_labels_store)
test_size = len(test_labels_store)
print 'train size: ', train_size, ' test size: ', test_size
vocab_size = len(word2id) + 1
rand_values = rng.normal(
0.0, 0.01,
(vocab_size, emb_size)) #generate a matrix by Gaussian distribution
#here, we leave code for loading word2vec to initialize words
rand_values[0] = np.array(np.zeros(emb_size), dtype=theano.config.floatX)
id2word = {y: x for x, y in word2id.iteritems()}
word2vec = load_word2vec()
rand_values = load_word2vec_to_init(rand_values, id2word, word2vec)
init_embeddings = theano.shared(
value=np.array(rand_values, dtype=theano.config.floatX), borrow=True
) #wrap up the python variable "rand_values" into theano variable
store_model_to_file(root_dic + 'LenciBenotto_best_para_init_embeddings',
[init_embeddings])
#now, start to build the input form of the model
sents_ids_l = T.imatrix()
sents_mask_l = T.fmatrix()
sents_ids_r = T.imatrix()
sents_mask_r = T.fmatrix()
word1_ids = T.imatrix()
word2_ids = T.imatrix()
word1_mask = T.fmatrix()
word2_mask = T.fmatrix()
extra = T.fvector()
labels = T.ivector()
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
def embed_input(emb_matrix, sent_ids):
return emb_matrix[sent_ids.flatten()].reshape(
(batch_size, maxSentLen, emb_size)).dimshuffle(0, 2, 1)
embed_input_l = embed_input(
init_embeddings, sents_ids_l
) #embeddings[sents_ids_l.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1) #the input format can be adapted into CNN or GRU or LSTM
embed_input_r = embed_input(
init_embeddings, sents_ids_r
) #embeddings[sents_ids_r.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1)
embed_word1 = init_embeddings[word1_ids.flatten()].reshape(
(batch_size, word1_ids.shape[1], emb_size))
embed_word2 = init_embeddings[word2_ids.flatten()].reshape(
(batch_size, word2_ids.shape[1], emb_size))
word1_embedding = T.sum(embed_word1 * word1_mask.dimshuffle(0, 1, 'x'),
axis=1)
word2_embedding = T.sum(embed_word2 * word2_mask.dimshuffle(0, 1, 'x'),
axis=1)
'''create_AttentiveConv_params '''
conv_W, conv_b = create_conv_para(rng,
filter_shape=(hidden_size[1], 1,
emb_size, filter_size[0]))
conv_W_context, conv_b_context = create_conv_para(
rng, filter_shape=(hidden_size[1], 1, emb_size, 1))
NN_para = [conv_W, conv_b, conv_W_context]
'''
attentive convolution function
'''
term_vs_term_layer = Conv_for_Pair(
rng,
origin_input_tensor3=embed_word1.dimshuffle(0, 2, 1),
origin_input_tensor3_r=embed_word2.dimshuffle(0, 2, 1),
input_tensor3=embed_word1.dimshuffle(0, 2, 1),
input_tensor3_r=embed_word2.dimshuffle(0, 2, 1),
mask_matrix=word1_mask,
mask_matrix_r=word2_mask,
image_shape=(batch_size, 1, emb_size, max_term_len),
image_shape_r=(batch_size, 1, emb_size, max_term_len),
filter_shape=(hidden_size[1], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[1], 1, emb_size, 1),
W=conv_W,
b=conv_b,
W_context=conv_W_context,
b_context=conv_b_context)
tt_embeddings_l = term_vs_term_layer.attentive_maxpool_vec_l
tt_embeddings_r = term_vs_term_layer.attentive_maxpool_vec_r
p_ww = T.concatenate([
tt_embeddings_l, tt_embeddings_r, tt_embeddings_l * tt_embeddings_r,
tt_embeddings_l - tt_embeddings_r
],
axis=1)
term_vs_def_layer = Conv_for_Pair(
rng,
origin_input_tensor3=embed_word1.dimshuffle(0, 2, 1),
origin_input_tensor3_r=embed_input_r,
input_tensor3=embed_word1.dimshuffle(0, 2, 1),
input_tensor3_r=embed_input_r,
mask_matrix=word1_mask,
mask_matrix_r=sents_mask_r,
image_shape=(batch_size, 1, emb_size, max_term_len),
image_shape_r=(batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size[1], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[1], 1, emb_size, 1),
W=conv_W,
b=conv_b,
W_context=conv_W_context,
b_context=conv_b_context)
td_embeddings_l = term_vs_def_layer.attentive_maxpool_vec_l
td_embeddings_r = term_vs_def_layer.attentive_maxpool_vec_r
p_wd = T.concatenate([
td_embeddings_l, td_embeddings_r, td_embeddings_l * td_embeddings_r,
td_embeddings_l - td_embeddings_r
],
axis=1)
def_vs_term_layer = Conv_for_Pair(
rng,
origin_input_tensor3=embed_input_l,
origin_input_tensor3_r=embed_word2.dimshuffle(0, 2, 1),
input_tensor3=embed_input_l,
input_tensor3_r=embed_word2.dimshuffle(0, 2, 1),
mask_matrix=sents_mask_l,
mask_matrix_r=word2_mask,
image_shape=(batch_size, 1, emb_size, maxSentLen),
image_shape_r=(batch_size, 1, emb_size, max_term_len),
filter_shape=(hidden_size[1], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[1], 1, emb_size, 1),
W=conv_W,
b=conv_b,
W_context=conv_W_context,
b_context=conv_b_context)
dt_embeddings_l = def_vs_term_layer.attentive_maxpool_vec_l
dt_embeddings_r = def_vs_term_layer.attentive_maxpool_vec_r
p_dw = T.concatenate([
dt_embeddings_l, dt_embeddings_r, dt_embeddings_l * dt_embeddings_r,
dt_embeddings_l - dt_embeddings_r
],
axis=1)
def_vs_def_layer = Conv_for_Pair(
rng,
origin_input_tensor3=embed_input_l,
origin_input_tensor3_r=embed_input_r,
input_tensor3=embed_input_l,
input_tensor3_r=embed_input_r,
mask_matrix=sents_mask_l,
mask_matrix_r=sents_mask_r,
image_shape=(batch_size, 1, emb_size, maxSentLen),
image_shape_r=(batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size[1], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[1], 1, emb_size, 1),
W=conv_W,
b=conv_b,
W_context=conv_W_context,
b_context=conv_b_context)
dd_embeddings_l = def_vs_def_layer.attentive_maxpool_vec_l
dd_embeddings_r = def_vs_def_layer.attentive_maxpool_vec_r
p_dd = T.concatenate([
dd_embeddings_l, dd_embeddings_r, dd_embeddings_l * dd_embeddings_r,
dd_embeddings_l - dd_embeddings_r
],
axis=1)
if p_mode == 'conc':
p = T.concatenate([p_ww, p_wd, p_dw, p_dd], axis=1)
p_len = 4 * 4 * hidden_size[1]
else:
p = T.max(T.concatenate([
p_ww.dimshuffle('x', 0, 1),
p_wd.dimshuffle('x', 0, 1),
p_dw.dimshuffle('x', 0, 1),
p_dd.dimshuffle('x', 0, 1)
],
axis=0),
axis=0)
p_len = 4 * hidden_size[1]
# HL_input = T.concatenate([p,cosine_matrix1_matrix2_rowwise(word1_embedding,word2_embedding).dimshuffle(0,'x'),extra.dimshuffle(0,'x')],axis=1)
# HL_input_size=p_len+1+1
#
# HL_layer_1=HiddenLayer(rng, input=HL_input, n_in=HL_input_size, n_out=hidden_size[1], activation=T.tanh)
"form input to LR classifier"
LR_input = T.concatenate([
p,
cosine_matrix1_matrix2_rowwise(word1_embedding,
word2_embedding).dimshuffle(0, 'x'),
extra.dimshuffle(0, 'x')
],
axis=1)
LR_input_size = p_len + 1 + 1
# LR_input = HL_layer_1.output
# LR_input_size = hidden_size[1]
U_a = create_ensemble_para(
rng, 2, LR_input_size) # the weight matrix hidden_size*2
LR_b = theano.shared(value=np.zeros((2, ), dtype=theano.config.floatX),
name='LR_b',
borrow=True) #bias for each target class
LR_para = [U_a, LR_b]
layer_LR = LogisticRegression(
rng,
input=LR_input,
n_in=LR_input_size,
n_out=2,
W=U_a,
b=LR_b,
bias=0.25
) #basically it is a multiplication between weight matrix and input feature vector
loss = layer_LR.negative_log_likelihood(
labels
) #for classification task, we usually used negative log likelihood as loss, the lower the better.
# L2_reg = (conv_W**2).sum()+(conv_W_context**2).sum()+(U_a**2).sum()
params = NN_para + LR_para #[init_embeddings]
cost = loss #+L2_weight*L2_reg
updates = Gradient_Cost_Para(cost, params, learning_rate)
train_model = theano.function([
sents_ids_l, sents_mask_l, sents_ids_r, sents_mask_r, word1_ids,
word2_ids, word1_mask, word2_mask, extra, labels
],
cost,
updates=updates,
allow_input_downcast=True,
on_unused_input='ignore')
test_model = theano.function([
sents_ids_l, sents_mask_l, sents_ids_r, sents_mask_r, word1_ids,
word2_ids, word1_mask, word2_mask, extra, labels
], [layer_LR.errors(labels), layer_LR.y_pred, layer_LR.prop_for_posi],
allow_input_downcast=True,
on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 50000000000 # look as this many examples regardless
start_time = time.time()
mid_time = start_time
past_time = mid_time
epoch = 0
done_looping = False
n_train_batches = train_size / batch_size
train_batch_start = list(
np.arange(n_train_batches) * batch_size) + [train_size - batch_size]
# n_dev_batches=dev_size/batch_size
# dev_batch_start=list(np.arange(n_dev_batches)*batch_size)+[dev_size-batch_size]
n_test_batches = test_size / batch_size
n_test_remain = test_size % batch_size
if n_test_remain != 0:
test_batch_start = list(
np.arange(n_test_batches) * batch_size) + [test_size - batch_size]
else:
test_batch_start = list(np.arange(n_test_batches) * batch_size)
# max_acc_dev=0.0
max_ap_test = 0.0
max_ap_topk_test = 0.0
max_f1 = 0.0
cost_i = 0.0
train_indices = range(train_size)
while epoch < n_epochs:
epoch = epoch + 1
random.Random(100).shuffle(
train_indices
) #shuffle training set for each new epoch, is supposed to promote performance, but not garrenteed
iter_accu = 0
for batch_id in train_batch_start: #for each batch
# iter means how many batches have been run, taking into loop
iter = (epoch - 1) * n_train_batches + iter_accu + 1
iter_accu += 1
train_id_batch = train_indices[batch_id:batch_id + batch_size]
cost_i += train_model(
train_sents_l[train_id_batch], train_masks_l[train_id_batch],
train_sents_r[train_id_batch], train_masks_r[train_id_batch],
train_word1[train_id_batch], train_word2[train_id_batch],
train_word1_mask[train_id_batch],
train_word2_mask[train_id_batch], train_extra[train_id_batch],
train_labels_store[train_id_batch])
#after each 1000 batches, we test the performance of the model on all test data
if iter % 100 == 0:
print 'Epoch ', epoch, 'iter ' + str(
iter) + ' average cost: ' + str(cost_i / iter), 'uses ', (
time.time() - past_time) / 60.0, 'min'
past_time = time.time()
pred_labels = []
probs = []
gold_labels = []
error_sum = 0.0
for idd, test_batch_id in enumerate(
test_batch_start): # for each test batch
error_i, pred_i, prob_i = test_model(
test_sents_l[test_batch_id:test_batch_id + batch_size],
test_masks_l[test_batch_id:test_batch_id + batch_size],
test_sents_r[test_batch_id:test_batch_id + batch_size],
test_masks_r[test_batch_id:test_batch_id + batch_size],
test_word1[test_batch_id:test_batch_id + batch_size],
test_word2[test_batch_id:test_batch_id + batch_size],
test_word1_mask[test_batch_id:test_batch_id +
batch_size],
test_word2_mask[test_batch_id:test_batch_id +
batch_size],
test_extra[test_batch_id:test_batch_id + batch_size],
test_labels_store[test_batch_id:test_batch_id +
batch_size])
error_sum += error_i
pred_labels += list(pred_i)
probs += list(prob_i)
if n_test_remain != 0:
probs = probs[:(len(test_batch_start) - 1) *
batch_size] + probs[-n_test_remain:]
assert len(test_labels) == len(probs)
# test_acc=1.0-error_sum/(len(test_batch_start))
test_ap = apk(test_labels, probs, k=len(test_labels))
test_ap_top100 = apk(test_labels, probs, k=100)
if test_ap > max_ap_test:
max_ap_test = test_ap
store_model_to_file(
root_dic + 'LenciBenotto_best_para_' +
str(max_ap_test), params)
if test_ap_top100 > max_ap_topk_test:
max_ap_topk_test = test_ap_top100
print '\t\tcurrent ap:', test_ap, ' ; ', '\t\tmax_ap: ', max_ap_test, 'ap@100: ', test_ap_top100, '\tmax_ap@100:', max_ap_topk_test
print 'Epoch ', epoch, 'uses ', (time.time() - mid_time) / 60.0, 'min'
mid_time = time.time()
#print 'Batch_size: ', update_freq
end_time = time.time()
print >> sys.stderr, ('The code for file ' + os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(term1_str, term2_str):
emb_size=300
filter_size=[3,3]
maxSentLen=40
hidden_size=[300,300]
max_term_len=4
p_mode = 'conc'
batch_size = 1
term1_def, source1 = load_concept_def(term1_str)
print '\n',term1_str, ':\t', term1_def,'\t', source1,'\n'
term2_def, source2 = load_concept_def(term2_str)
print '\n',term2_str, ':\t', term2_def, '\t', source2,'\n'
# exit(0)
word2id = load_word2id('/save/wenpeng/datasets/HypeNet/HyperDef_label_meta_best_para_word2id.pkl')
seed=1234
np.random.seed(seed)
rng = np.random.RandomState(seed) #random seed, control the model generates the same results
# all_sentences_l, all_masks_l, all_sentences_r, all_masks_r, all_word1,all_word2,all_word1_mask,all_word2_mask,all_labels, all_extra, word2id =load_wordnet_hyper_vs_all_with_words(maxlen=maxSentLen, wordlen=max_term_len) #minlen, include one label, at least one word in the sentence
# test_sents_l, test_masks_l, test_sents_r, test_masks_r, test_labels, word2id =load_ACE05_dataset(maxSentLen, word2id)
# test_sents_l, test_masks_l, test_sents_r, test_masks_r, test_word1,test_word2,test_word1_mask,test_word2_mask,test_labels, test_extra, word2id = load_EVAlution_hyper_vs_all_with_words(maxSentLen, word2id, wordlen=max_term_len)
test_sents_l, test_masks_l, test_sents_r, test_masks_r, test_word1,test_word2,test_word1_mask,test_word2_mask, test_extra, word2id = parse_individual_termPair(term1_str, term2_str, term1_def, term2_def, maxSentLen, word2id, wordlen=max_term_len)
# total_size = len(all_sentences_l)
# hold_test_size = 10000
# train_size = total_size - hold_test_size
# train_sents_l=np.asarray(all_sentences_l[:train_size], dtype='int32')
# dev_sents_l=np.asarray(all_sentences_l[1], dtype='int32')
# test_sents_l=np.asarray(all_sentences_l[-test_size:], dtype='int32')
test_sents_l=np.asarray(test_sents_l, dtype='int32')
# train_masks_l=np.asarray(all_masks_l[:train_size], dtype=theano.config.floatX)
# dev_masks_l=np.asarray(all_masks_l[1], dtype=theano.config.floatX)
# test_masks_l=np.asarray(all_masks_l[-test_size:], dtype=theano.config.floatX)
test_masks_l=np.asarray(test_masks_l, dtype=theano.config.floatX)
# train_sents_r=np.asarray(all_sentences_r[:train_size], dtype='int32')
# dev_sents_r=np.asarray(all_sentences_r[1] , dtype='int32')
# test_sents_r=np.asarray(all_sentences_r[-test_size:], dtype='int32')
test_sents_r=np.asarray(test_sents_r, dtype='int32')
# train_masks_r=np.asarray(all_masks_r[:train_size], dtype=theano.config.floatX)
# dev_masks_r=np.asarray(all_masks_r[1], dtype=theano.config.floatX)
# test_masks_r=np.asarray(all_masks_r[-test_size:], dtype=theano.config.floatX)
test_masks_r=np.asarray(test_masks_r, dtype=theano.config.floatX)
# train_word1=np.asarray(all_word1[:train_size], dtype='int32')
# train_word2=np.asarray(all_word2[:train_size], dtype='int32')
test_word1=np.asarray(test_word1, dtype='int32')
test_word2=np.asarray(test_word2, dtype='int32')
# train_word1_mask=np.asarray(all_word1_mask[:train_size], dtype=theano.config.floatX)
# train_word2_mask=np.asarray(all_word2_mask[:train_size], dtype=theano.config.floatX)
test_word1_mask=np.asarray(test_word1_mask, dtype=theano.config.floatX)
test_word2_mask=np.asarray(test_word2_mask, dtype=theano.config.floatX)
# train_labels_store=np.asarray(all_labels[:train_size], dtype='int32')
# dev_labels_store=np.asarray(all_labels[1], dtype='int32')
# test_labels_store=np.asarray(all_labels[-test_size:], dtype='int32')
# test_labels_store=np.asarray(test_labels, dtype='int32')
# train_extra=np.asarray(all_extra[:train_size], dtype=theano.config.floatX)
test_extra=np.asarray(test_extra, dtype=theano.config.floatX)
# train_size=len(train_labels_store)
# dev_size=len(dev_labels_store)
test_size=len(test_extra)
print ' test size: ', len(test_extra)
vocab_size=len(word2id)+1
rand_values=rng.normal(0.0, 0.01, (vocab_size, emb_size)) #generate a matrix by Gaussian distribution
#here, we leave code for loading word2vec to initialize words
# rand_values[0]=np.array(np.zeros(emb_size),dtype=theano.config.floatX)
# id2word = {y:x for x,y in word2id.iteritems()}
# word2vec=load_word2vec()
# rand_values=load_word2vec_to_init(rand_values, id2word, word2vec)
init_embeddings=theano.shared(value=np.array(rand_values,dtype=theano.config.floatX), borrow=True) #wrap up the python variable "rand_values" into theano variable
# store_model_to_file('/save/wenpeng/datasets/HypeNet/HyperDef_label_meta_best_para_embeddings', [init_embeddings])
# exit(0)
#now, start to build the input form of the model
sents_ids_l=T.imatrix()
sents_mask_l=T.fmatrix()
sents_ids_r=T.imatrix()
sents_mask_r=T.fmatrix()
word1_ids = T.imatrix()
word2_ids = T.imatrix()
word1_mask = T.fmatrix()
word2_mask = T.fmatrix()
extra = T.fvector()
# labels=T.ivector()
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
def embed_input(emb_matrix, sent_ids):
return emb_matrix[sent_ids.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1)
embed_input_l=embed_input(init_embeddings, sents_ids_l)#embeddings[sents_ids_l.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1) #the input format can be adapted into CNN or GRU or LSTM
embed_input_r=embed_input(init_embeddings, sents_ids_r)#embeddings[sents_ids_r.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1)
embed_word1 = init_embeddings[word1_ids.flatten()].reshape((batch_size,word1_ids.shape[1], emb_size))
embed_word2 = init_embeddings[word2_ids.flatten()].reshape((batch_size,word2_ids.shape[1], emb_size))
word1_embedding = T.sum(embed_word1*word1_mask.dimshuffle(0,1,'x'), axis=1)
word2_embedding = T.sum(embed_word2*word2_mask.dimshuffle(0,1,'x'), axis=1)
'''create_AttentiveConv_params '''
conv_W, conv_b=create_conv_para(rng, filter_shape=(hidden_size[1], 1, emb_size, filter_size[0]))
conv_W_context, conv_b_context=create_conv_para(rng, filter_shape=(hidden_size[1], 1, emb_size, 1))
NN_para=[conv_W, conv_b,conv_W_context]
'''
attentive convolution function
'''
term_vs_term_layer = Conv_for_Pair(rng,
origin_input_tensor3=embed_word1.dimshuffle(0,2,1),
origin_input_tensor3_r = embed_word2.dimshuffle(0,2,1),
input_tensor3=embed_word1.dimshuffle(0,2,1),
input_tensor3_r = embed_word2.dimshuffle(0,2,1),
mask_matrix = word1_mask,
mask_matrix_r = word2_mask,
image_shape=(batch_size, 1, emb_size, max_term_len),
image_shape_r = (batch_size, 1, emb_size, max_term_len),
filter_shape=(hidden_size[1], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[1], 1,emb_size, 1),
W=conv_W, b=conv_b,
W_context=conv_W_context, b_context=conv_b_context)
tt_embeddings_l = term_vs_term_layer.attentive_maxpool_vec_l
tt_embeddings_r = term_vs_term_layer.attentive_maxpool_vec_r
p_ww = T.concatenate([tt_embeddings_l,tt_embeddings_r,tt_embeddings_l*tt_embeddings_r,tt_embeddings_l-tt_embeddings_r], axis=1)
term_vs_def_layer = Conv_for_Pair(rng,
origin_input_tensor3=embed_word1.dimshuffle(0,2,1),
origin_input_tensor3_r = embed_input_r,
input_tensor3=embed_word1.dimshuffle(0,2,1),
input_tensor3_r = embed_input_r,
mask_matrix = word1_mask,
mask_matrix_r = sents_mask_r,
image_shape=(batch_size, 1, emb_size, max_term_len),
image_shape_r = (batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size[1], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[1], 1,emb_size, 1),
W=conv_W, b=conv_b,
W_context=conv_W_context, b_context=conv_b_context)
td_embeddings_l = term_vs_def_layer.attentive_maxpool_vec_l
td_embeddings_r = term_vs_def_layer.attentive_maxpool_vec_r
p_wd = T.concatenate([td_embeddings_l,td_embeddings_r,td_embeddings_l*td_embeddings_r,td_embeddings_l-td_embeddings_r], axis=1)
def_vs_term_layer = Conv_for_Pair(rng,
origin_input_tensor3=embed_input_l,
origin_input_tensor3_r = embed_word2.dimshuffle(0,2,1),
input_tensor3=embed_input_l,
input_tensor3_r = embed_word2.dimshuffle(0,2,1),
mask_matrix = sents_mask_l,
mask_matrix_r = word2_mask,
image_shape=(batch_size, 1, emb_size, maxSentLen),
image_shape_r = (batch_size, 1, emb_size, max_term_len),
filter_shape=(hidden_size[1], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[1], 1,emb_size, 1),
W=conv_W, b=conv_b,
W_context=conv_W_context, b_context=conv_b_context)
dt_embeddings_l = def_vs_term_layer.attentive_maxpool_vec_l
dt_embeddings_r = def_vs_term_layer.attentive_maxpool_vec_r
p_dw = T.concatenate([dt_embeddings_l,dt_embeddings_r,dt_embeddings_l*dt_embeddings_r,dt_embeddings_l-dt_embeddings_r], axis=1)
def_vs_def_layer = Conv_for_Pair(rng,
origin_input_tensor3=embed_input_l,
origin_input_tensor3_r = embed_input_r,
input_tensor3=embed_input_l,
input_tensor3_r = embed_input_r,
mask_matrix = sents_mask_l,
mask_matrix_r = sents_mask_r,
image_shape=(batch_size, 1, emb_size, maxSentLen),
image_shape_r = (batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size[1], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[1], 1,emb_size, 1),
W=conv_W, b=conv_b,
W_context=conv_W_context, b_context=conv_b_context)
dd_embeddings_l = def_vs_def_layer.attentive_maxpool_vec_l
dd_embeddings_r = def_vs_def_layer.attentive_maxpool_vec_r
p_dd = T.concatenate([dd_embeddings_l,dd_embeddings_r,dd_embeddings_l*dd_embeddings_r,dd_embeddings_l-dd_embeddings_r], axis=1)
if p_mode == 'conc':
p=T.concatenate([p_ww, p_wd, p_dw, p_dd], axis=1)
p_len = 4*4*hidden_size[1]
else:
p = T.max(T.concatenate([p_ww.dimshuffle('x',0,1),p_wd.dimshuffle('x',0,1),p_dw.dimshuffle('x',0,1),p_dd.dimshuffle('x',0,1)],axis=0), axis=0)
p_len =4*hidden_size[1]
"form input to LR classifier"
LR_input = T.concatenate([p,extra.dimshuffle(0,'x')],axis=1)
LR_input_size=p_len+1
U_a = create_ensemble_para(rng, 2, LR_input_size) # the weight matrix hidden_size*2
LR_b = theano.shared(value=np.zeros((2,),dtype=theano.config.floatX),name='LR_b', borrow=True) #bias for each target class
LR_para=[U_a, LR_b]
layer_LR=LogisticRegression(rng, input=LR_input, n_in=LR_input_size, n_out=2, W=U_a, b=LR_b) #basically it is a multiplication between weight matrix and input feature vector
params = NN_para+LR_para #[init_embeddings]
load_model_from_file('/save/wenpeng/datasets/HypeNet/HyperDef_label_meta_best_para_embeddings', [init_embeddings])
load_model_from_file('/save/wenpeng/datasets/HypeNet/HyperDef_label_meta_best_para_0.938730853392', params)
test_model = theano.function([sents_ids_l, sents_mask_l, sents_ids_r, sents_mask_r, word1_ids,word2_ids,word1_mask,word2_mask,extra], [layer_LR.y_pred,layer_LR.prop_for_posi], allow_input_downcast=True, on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... testing'
n_test_batches=test_size/batch_size
n_test_remain = test_size%batch_size
if n_test_remain!=0:
test_batch_start=list(np.arange(n_test_batches)*batch_size)+[test_size-batch_size]
else:
test_batch_start=list(np.arange(n_test_batches)*batch_size)
# max_acc_dev=0.0
# max_ap_test=0.0
# max_ap_topk_test=0.0
# max_f1=0.0
# cost_i=0.0
# train_indices = range(train_size)
for idd, test_batch_id in enumerate(test_batch_start): # for each test batch
pred_i, prob_i=test_model(
test_sents_l[test_batch_id:test_batch_id+batch_size],
test_masks_l[test_batch_id:test_batch_id+batch_size],
test_sents_r[test_batch_id:test_batch_id+batch_size],
test_masks_r[test_batch_id:test_batch_id+batch_size],
test_word1[test_batch_id:test_batch_id+batch_size],
test_word2[test_batch_id:test_batch_id+batch_size],
test_word1_mask[test_batch_id:test_batch_id+batch_size],
test_word2_mask[test_batch_id:test_batch_id+batch_size],
test_extra[test_batch_id:test_batch_id+batch_size])
print pred_i, prob_i
def evaluate_lenet5(learning_rate=0.085, n_epochs=2000, nkerns=[1,1], batch_size=1, window_width=3,
maxSentLength=60, emb_size=300, L2_weight=0.0005, update_freq=1, unifiedWidth_conv0=8, k_dy=3, ktop=3):
model_options = locals().copy()
print "model options", model_options
rootPath='/mounts/data/proj/wenpeng/Dataset/MicrosoftParaphrase/tokenized_msr/';
rng = numpy.random.RandomState(23455)
datasets, vocab_size=load_msr_corpus(rootPath+'vocab.txt', rootPath+'tokenized_train.txt', rootPath+'tokenized_test.txt', maxSentLength)
mtPath='/mounts/data/proj/wenpeng/Dataset/paraphraseMT/'
#mt_train, mt_test=load_mts(mtPath+'concate_15mt_train.txt', mtPath+'concate_15mt_test.txt')
#wm_train, wm_test=load_wmf_wikiQA(rootPath+'train_number_matching_scores.txt', rootPath+'test_number_matching_scores.txt')
indices_train, trainY, trainLengths, normalized_train_length, trainLeftPad, trainRightPad= datasets[0]
indices_train_l=indices_train[::2,:]
indices_train_r=indices_train[1::2,:]
trainLengths_l=trainLengths[::2]
trainLengths_r=trainLengths[1::2]
normalized_train_length_l=normalized_train_length[::2]
normalized_train_length_r=normalized_train_length[1::2]
trainLeftPad_l=trainLeftPad[::2]
trainLeftPad_r=trainLeftPad[1::2]
trainRightPad_l=trainRightPad[::2]
trainRightPad_r=trainRightPad[1::2]
indices_test, testY, testLengths,normalized_test_length, testLeftPad, testRightPad= datasets[1]
indices_test_l=indices_test[::2,:]
indices_test_r=indices_test[1::2,:]
testLengths_l=testLengths[::2]
testLengths_r=testLengths[1::2]
normalized_test_length_l=normalized_test_length[::2]
normalized_test_length_r=normalized_test_length[1::2]
testLeftPad_l=testLeftPad[::2]
testLeftPad_r=testLeftPad[1::2]
testRightPad_l=testRightPad[::2]
testRightPad_r=testRightPad[1::2]
n_train_batches=indices_train_l.shape[0]/batch_size
n_test_batches=indices_test_l.shape[0]/batch_size
train_batch_start=list(numpy.arange(n_train_batches)*batch_size)
test_batch_start=list(numpy.arange(n_test_batches)*batch_size)
indices_train_l=theano.shared(numpy.asarray(indices_train_l, dtype=theano.config.floatX), borrow=True)
indices_train_r=theano.shared(numpy.asarray(indices_train_r, dtype=theano.config.floatX), borrow=True)
indices_test_l=theano.shared(numpy.asarray(indices_test_l, dtype=theano.config.floatX), borrow=True)
indices_test_r=theano.shared(numpy.asarray(indices_test_r, dtype=theano.config.floatX), borrow=True)
indices_train_l=T.cast(indices_train_l, 'int64')
indices_train_r=T.cast(indices_train_r, 'int64')
indices_test_l=T.cast(indices_test_l, 'int64')
indices_test_r=T.cast(indices_test_r, 'int64')
rand_values=random_value_normal((vocab_size+1, emb_size), theano.config.floatX, numpy.random.RandomState(1234))
rand_values[0]=numpy.array(numpy.zeros(emb_size))
#rand_values[0]=numpy.array([1e-50]*emb_size)
rand_values=load_word2vec_to_init(rand_values, rootPath+'vocab_embs_300d.txt')
embeddings=theano.shared(value=rand_values, borrow=True)
error_sum=0
# allocate symbolic variables for the data
index = T.lscalar()
x_index_l = T.lmatrix('x_index_l') # now, x is the index matrix, must be integer
x_index_r = T.lmatrix('x_index_r')
y = T.lvector('y')
left_l=T.lscalar()
right_l=T.lscalar()
left_r=T.lscalar()
right_r=T.lscalar()
length_l=T.lscalar()
length_r=T.lscalar()
norm_length_l=T.dscalar()
norm_length_r=T.dscalar()
#mts=T.dmatrix()
#wmf=T.dmatrix()
cost_tmp=T.dscalar()
#x=embeddings[x_index.flatten()].reshape(((batch_size*4),maxSentLength, emb_size)).transpose(0, 2, 1).flatten()
ishape = (emb_size, maxSentLength) # this is the size of MNIST images
filter_size=(emb_size,window_width)
#poolsize1=(1, ishape[1]-filter_size[1]+1) #?????????????????????????????
length_after_wideConv0=ishape[1]+filter_size[1]-1
poolsize1=(1, length_after_wideConv0)
length_after_wideConv1=unifiedWidth_conv0+filter_size[1]-1
poolsize2=(1, length_after_wideConv1)
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
# Reshape matrix of rasterized images of shape (batch_size,28*28)
# to a 4D tensor, compatible with our LeNetConvPoolLayer
#layer0_input = x.reshape(((batch_size*4), 1, ishape[0], ishape[1]))
layer0_l_input = embeddings[x_index_l.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_r_input = embeddings[x_index_r.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
conv_W, conv_b=create_conv_para(rng, filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]))
#layer0_output = debug_print(layer0.output, 'layer0.output')
layer0_ll=Conv_Fold_DynamicK_PoolLayer_NAACL(rng, input=layer0_l_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]), poolsize=poolsize1, k=k_dy, unifiedWidth=unifiedWidth_conv0, left=left_l, right=right_l,
W=conv_W, b=conv_b,
firstLayer=True)
layer0_rr=Conv_Fold_DynamicK_PoolLayer_NAACL(rng, input=layer0_r_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]), poolsize=poolsize1, k=k_dy, unifiedWidth=unifiedWidth_conv0, left=left_r, right=right_r,
W=conv_W, b=conv_b,
firstLayer=True)
layer0_l_output=debug_print(layer0_ll.fold_output, 'layer0_l.output')
layer0_r_output=debug_print(layer0_rr.fold_output, 'layer0_r.output')
layer1=Average_Pooling_for_Top(rng, input_l=layer0_l_output, input_r=layer0_r_output, kern=ishape[0]/2,
left_l=left_l, right_l=right_l, left_r=left_r, right_r=right_r,
length_l=length_l+filter_size[1]-1, length_r=length_r+filter_size[1]-1,
dim=maxSentLength+filter_size[1]-1)
conv_W2, conv_b2=create_conv_para(rng, filter_shape=(1, 1, filter_size[0]/2, filter_size[1]))
#layer0_output = debug_print(layer0.output, 'layer0.output')
layer1_ll=Conv_Fold_DynamicK_PoolLayer_NAACL(rng, input=layer0_ll.output,
image_shape=(batch_size, nkerns[0], ishape[0]/2, unifiedWidth_conv0),
filter_shape=(nkerns[1], nkerns[0], filter_size[0]/2, filter_size[1]), poolsize=poolsize2, k=ktop, unifiedWidth=ktop, left=layer0_ll.leftPad, right=layer0_ll.rightPad,
W=conv_W2, b=conv_b2,
firstLayer=False)
layer1_rr=Conv_Fold_DynamicK_PoolLayer_NAACL(rng, input=layer0_rr.output,
image_shape=(batch_size, nkerns[0], ishape[0]/2, unifiedWidth_conv0),
filter_shape=(nkerns[1], nkerns[0], filter_size[0]/2, filter_size[1]), poolsize=poolsize2, k=ktop, unifiedWidth=ktop, left=layer0_rr.leftPad, right=layer0_rr.rightPad,
W=conv_W2, b=conv_b2,
firstLayer=False)
layer1_l_output=debug_print(layer1_ll.fold_output, 'layer1_l.output')
layer1_r_output=debug_print(layer1_rr.fold_output, 'layer1_r.output')
layer2=Average_Pooling_for_Top(rng, input_l=layer1_l_output, input_r=layer1_r_output, kern=ishape[0]/4,
left_l=layer0_ll.leftPad, right_l=layer0_ll.rightPad, left_r=layer0_rr.leftPad, right_r=layer0_rr.rightPad,
length_l=k_dy+filter_size[1]-1, length_r=k_dy+filter_size[1]-1,
dim=unifiedWidth_conv0+filter_size[1]-1)
#layer2=HiddenLayer(rng, input=layer1_out, n_in=nkerns[0]*2, n_out=hidden_size, activation=T.tanh)
sum_uni_l=T.sum(layer0_l_input, axis=3).reshape((1, emb_size))
norm_uni_l=sum_uni_l/T.sqrt((sum_uni_l**2).sum())
sum_uni_r=T.sum(layer0_r_input, axis=3).reshape((1, emb_size))
norm_uni_r=sum_uni_r/T.sqrt((sum_uni_r**2).sum())
uni_cosine=cosine(sum_uni_l, sum_uni_r)
'''
linear=Linear(sum_uni_l, sum_uni_r)
poly=Poly(sum_uni_l, sum_uni_r)
sigmoid=Sigmoid(sum_uni_l, sum_uni_r)
rbf=RBF(sum_uni_l, sum_uni_r)
gesd=GESD(sum_uni_l, sum_uni_r)
'''
eucli_1=1.0/(1.0+EUCLID(sum_uni_l, sum_uni_r))#25.2%
#eucli_1=EUCLID(sum_uni_l, sum_uni_r)
len_l=norm_length_l.reshape((1,1))
len_r=norm_length_r.reshape((1,1))
'''
len_l=length_l.reshape((1,1))
len_r=length_r.reshape((1,1))
'''
#length_gap=T.log(1+(T.sqrt((len_l-len_r)**2))).reshape((1,1))
#length_gap=T.sqrt((len_l-len_r)**2)
#layer3_input=mts
layer3_input=T.concatenate([#mts,
eucli_1, uni_cosine,
#norm_uni_l, norm_uni_r,#uni_cosine,#norm_uni_l-(norm_uni_l+norm_uni_r)/2,#uni_cosine, #
layer1.output_eucli_to_simi,layer1.output_cosine,
layer1.output_attentions, #layer1.output_cosine,layer1.output_vector_l-(layer1.output_vector_l+layer1.output_vector_r)/2,#layer1.output_cosine, #
#layer1.output_vector_l,layer1.output_vector_r,
layer2.output_eucli_to_simi,layer2.output_cosine,
layer2.output_attentions,
#layer2.output_vector_l,layer2.output_vector_r,
len_l, len_r
#layer1.output_attentions,
#wmf,
], axis=1)#, layer2.output, layer1.output_cosine], axis=1)
#layer3_input=T.concatenate([mts,eucli, uni_cosine, len_l, len_r, norm_uni_l-(norm_uni_l+norm_uni_r)/2], axis=1)
#layer3=LogisticRegression(rng, input=layer3_input, n_in=11, n_out=2)
layer3=LogisticRegression(rng, input=layer3_input, n_in=(2)+(2+4*4)+(2+4*4)+2, n_out=2)
#L2_reg =(layer3.W** 2).sum()+(layer2.W** 2).sum()+(layer1.W** 2).sum()+(conv_W** 2).sum()
L2_reg =debug_print((layer3.W** 2).sum()+(conv_W** 2).sum()+(conv_W2**2).sum(), 'L2_reg')#+(layer1.W** 2).sum()
cost_this =debug_print(layer3.negative_log_likelihood(y), 'cost_this')#+L2_weight*L2_reg
cost=debug_print((cost_this+cost_tmp)/update_freq+L2_weight*L2_reg, 'cost')
test_model = theano.function([index], [layer3.errors(y), layer3.y_pred, layer3_input, y],
givens={
x_index_l: indices_test_l[index: index + batch_size],
x_index_r: indices_test_r[index: index + batch_size],
y: testY[index: index + batch_size],
left_l: testLeftPad_l[index],
right_l: testRightPad_l[index],
left_r: testLeftPad_r[index],
right_r: testRightPad_r[index],
length_l: testLengths_l[index],
length_r: testLengths_r[index],
norm_length_l: normalized_test_length_l[index],
norm_length_r: normalized_test_length_r[index]
#mts: mt_test[index: index + batch_size],
#wmf: wm_test[index: index + batch_size]
}, on_unused_input='ignore')
#params = layer3.params + layer2.params + layer1.params+ [conv_W, conv_b]
params = layer3.params+ [conv_W]+[conv_W2]# + layer1.params
accumulator=[]
for para_i in params:
eps_p=numpy.zeros_like(para_i.get_value(borrow=True),dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
#grad_i=debug_print(grad_i,'grad_i')
#norm=T.sqrt((grad_i**2).sum())
#if T.lt(norm_threshold, norm):
# print 'big norm'
# grad_i=grad_i*(norm_threshold/norm)
acc = acc_i + T.sqr(grad_i)
updates.append((param_i, param_i - learning_rate * grad_i / T.sqrt(acc))) #AdaGrad
updates.append((acc_i, acc))
train_model = theano.function([index,cost_tmp], [cost,layer3.errors(y), layer3_input], updates=updates,
givens={
x_index_l: indices_train_l[index: index + batch_size],
x_index_r: indices_train_r[index: index + batch_size],
y: trainY[index: index + batch_size],
left_l: trainLeftPad_l[index],
right_l: trainRightPad_l[index],
left_r: trainLeftPad_r[index],
right_r: trainRightPad_r[index],
length_l: trainLengths_l[index],
length_r: trainLengths_r[index],
norm_length_l: normalized_train_length_l[index],
norm_length_r: normalized_train_length_r[index]
#mts: mt_train[index: index + batch_size],
#wmf: wm_train[index: index + batch_size]
}, on_unused_input='ignore')
train_model_predict = theano.function([index], [cost_this,layer3.errors(y), layer3_input, y],
givens={
x_index_l: indices_train_l[index: index + batch_size],
x_index_r: indices_train_r[index: index + batch_size],
y: trainY[index: index + batch_size],
left_l: trainLeftPad_l[index],
right_l: trainRightPad_l[index],
left_r: trainLeftPad_r[index],
right_r: trainRightPad_r[index],
length_l: trainLengths_l[index],
length_r: trainLengths_r[index],
norm_length_l: normalized_train_length_l[index],
norm_length_r: normalized_train_length_r[index]
#mts: mt_train[index: index + batch_size],
#wmf: wm_train[index: index + batch_size]
}, on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
patience_increase = 2 # wait this much longer when a new best is
# found
improvement_threshold = 0.995 # a relative improvement of this much is
# considered significant
validation_frequency = min(n_train_batches, patience / 2)
# go through this many
# minibatche before checking the network
# on the validation set; in this case we
# check every epoch
best_params = None
best_validation_loss = numpy.inf
best_iter = 0
test_score = 0.
start_time = time.clock()
epoch = 0
done_looping = False
max_acc=0.0
best_epoch=0
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
#for minibatch_index in xrange(n_train_batches): # each batch
minibatch_index=0
shuffle(train_batch_start)#shuffle training data
cost_tmp=0.0
for batch_start in train_batch_start:
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * n_train_batches + minibatch_index +1
minibatch_index=minibatch_index+1
#if epoch %2 ==0:
# batch_start=batch_start+remain_train
#time.sleep(0.5)
if iter%update_freq != 0:
cost_ij, error_ij, layer3_input, y=train_model_predict(batch_start)
#print 'cost_ij: ', cost_ij
cost_tmp+=cost_ij
error_sum+=error_ij
else:
cost_average, error_ij, layer3_input= train_model(batch_start,cost_tmp)
#print 'training @ iter = '+str(iter)+' average cost: '+str(cost_average)+' sum error: '+str(error_sum)+'/'+str(update_freq)
error_sum=0
cost_tmp=0.0#reset for the next batch
#print layer3_input
#exit(0)
#exit(0)
if iter % n_train_batches == 0:
print 'training @ iter = '+str(iter)+' average cost: '+str(cost_average)+' error: '+str(error_sum)+'/'+str(update_freq)+' error rate: '+str(error_sum*1.0/update_freq)
#if iter ==1:
# exit(0)
if iter % validation_frequency == 0:
#write_file=open('log.txt', 'w')
test_losses=[]
test_y=[]
test_features=[]
for i in test_batch_start:
test_loss, pred_y, layer3_input, y=test_model(i)
#test_losses = [test_model(i) for i in test_batch_start]
test_losses.append(test_loss)
test_y.append(y[0])
test_features.append(layer3_input[0])
#write_file.write(str(pred_y[0])+'\n')#+'\t'+str(testY[i].eval())+
#write_file.close()
test_score = numpy.mean(test_losses)
test_acc=1-test_score
print(('\t\t\t\t\t\tepoch %i, minibatch %i/%i, test acc of best '
'model %f %%') %
(epoch, minibatch_index, n_train_batches,
(1-test_score) * 100.))
#now, see the results of svm
#write_feature=open('feature_check.txt', 'w')
train_y=[]
train_features=[]
for batch_start in train_batch_start:
cost_ij, error_ij, layer3_input, y=train_model_predict(batch_start)
train_y.append(y[0])
train_features.append(layer3_input[0])
#write_feature.write(' '.join(map(str,layer3_input[0]))+'\n')
#write_feature.close()
clf = svm.SVC(kernel='linear')#OneVsRestClassifier(LinearSVC()) #linear 76.11%, poly 75.19, sigmoid 66.50, rbf 73.33
clf.fit(train_features, train_y)
results=clf.predict(test_features)
lr=linear_model.LogisticRegression().fit(train_features, train_y)
results_lr=lr.predict(test_features)
corr_count=0
corr_lr=0
test_size=len(test_y)
for i in range(test_size):
if results[i]==test_y[i]:
corr_count+=1
if numpy.absolute(results_lr[i]-test_y[i])<0.5:
corr_lr+=1
acc=corr_count*1.0/test_size
acc_lr=corr_lr*1.0/test_size
if acc > max_acc:
max_acc=acc
best_epoch=epoch
if acc_lr> max_acc:
max_acc=acc_lr
best_epoch=epoch
if test_acc> max_acc:
max_acc=test_acc
best_epoch=epoch
print '\t\t\t\t\t\t\t\t\t\t\tsvm acc: ', acc, 'LR acc: ', acc_lr, ' max acc: ', max_acc , ' at epoch: ', best_epoch
#exit(0)
if patience <= iter:
done_looping = True
break
end_time = time.clock()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' +
os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(learning_rate=0.09, n_epochs=2000, nkerns=[50], batch_size=1, window_width=3,
maxSentLength=64, emb_size=300, hidden_size=200,
margin=0.5, L2_weight=0.00065, Div_reg=0.01, update_freq=1, norm_threshold=5.0, max_truncate=33, max_truncate_nonoverlap=24):
maxSentLength=max_truncate+2*(window_width-1)
maxSentLength_nonoverlap=max_truncate_nonoverlap+2*(window_width-1)
model_options = locals().copy()
print "model options", model_options
rootPath='/mounts/data/proj/wenpeng/Dataset/SICK/';
rng = numpy.random.RandomState(23455)
datasets, vocab_size=load_SICK_corpus(rootPath+'vocab.txt', rootPath+'train_plus_dev.txt', rootPath+'test.txt', max_truncate,maxSentLength, entailment=True)#vocab_size contain train, dev and test
datasets_nonoverlap, vocab_size_nonoverlap=load_SICK_corpus(rootPath+'vocab_nonoverlap_train_plus_dev.txt', rootPath+'train_plus_dev_removed_overlap_as_training.txt', rootPath+'test_removed_overlap_as_training.txt', max_truncate_nonoverlap,maxSentLength_nonoverlap, entailment=True)
#datasets, vocab_size=load_wikiQA_corpus(rootPath+'vocab_lower_in_word2vec.txt', rootPath+'WikiQA-train.txt', rootPath+'test_filtered.txt', maxSentLength)#vocab_size contain train, dev and test
#mtPath='/mounts/data/proj/wenpeng/Dataset/WikiQACorpus/MT/BLEU_NIST/'
mt_train, mt_test=load_mts_wikiQA(rootPath+'Train_plus_dev_MT/concate_14mt_train.txt', rootPath+'Test_MT/concate_14mt_test.txt')
extra_train, extra_test=load_extra_features(rootPath+'train_plus_dev_rule_features_cosine_eucli_negation_len1_len2_syn_hyper1_hyper2_anto(newsimi0.4).txt', rootPath+'test_rule_features_cosine_eucli_negation_len1_len2_syn_hyper1_hyper2_anto(newsimi0.4).txt')
discri_train, discri_test=load_extra_features(rootPath+'train_plus_dev_discri_features_0.3.txt', rootPath+'test_discri_features_0.3.txt')
#wm_train, wm_test=load_wmf_wikiQA(rootPath+'train_word_matching_scores.txt', rootPath+'test_word_matching_scores.txt')
#wm_train, wm_test=load_wmf_wikiQA(rootPath+'train_word_matching_scores_normalized.txt', rootPath+'test_word_matching_scores_normalized.txt')
indices_train, trainY, trainLengths, normalized_train_length, trainLeftPad, trainRightPad= datasets[0]
indices_train_l=indices_train[::2,:]
indices_train_r=indices_train[1::2,:]
trainLengths_l=trainLengths[::2]
trainLengths_r=trainLengths[1::2]
normalized_train_length_l=normalized_train_length[::2]
normalized_train_length_r=normalized_train_length[1::2]
trainLeftPad_l=trainLeftPad[::2]
trainLeftPad_r=trainLeftPad[1::2]
trainRightPad_l=trainRightPad[::2]
trainRightPad_r=trainRightPad[1::2]
indices_test, testY, testLengths,normalized_test_length, testLeftPad, testRightPad= datasets[1]
indices_test_l=indices_test[::2,:]
indices_test_r=indices_test[1::2,:]
testLengths_l=testLengths[::2]
testLengths_r=testLengths[1::2]
normalized_test_length_l=normalized_test_length[::2]
normalized_test_length_r=normalized_test_length[1::2]
testLeftPad_l=testLeftPad[::2]
testLeftPad_r=testLeftPad[1::2]
testRightPad_l=testRightPad[::2]
testRightPad_r=testRightPad[1::2]
n_train_batches=indices_train_l.shape[0]/batch_size
n_test_batches=indices_test_l.shape[0]/batch_size
train_batch_start=list(numpy.arange(n_train_batches)*batch_size)
test_batch_start=list(numpy.arange(n_test_batches)*batch_size)
indices_train_l=theano.shared(numpy.asarray(indices_train_l, dtype=theano.config.floatX), borrow=True)
indices_train_r=theano.shared(numpy.asarray(indices_train_r, dtype=theano.config.floatX), borrow=True)
indices_test_l=theano.shared(numpy.asarray(indices_test_l, dtype=theano.config.floatX), borrow=True)
indices_test_r=theano.shared(numpy.asarray(indices_test_r, dtype=theano.config.floatX), borrow=True)
indices_train_l=T.cast(indices_train_l, 'int64')
indices_train_r=T.cast(indices_train_r, 'int64')
indices_test_l=T.cast(indices_test_l, 'int64')
indices_test_r=T.cast(indices_test_r, 'int64')
rand_values=random_value_normal((vocab_size+1, emb_size), theano.config.floatX, numpy.random.RandomState(1234))
rand_values[0]=numpy.array(numpy.zeros(emb_size),dtype=theano.config.floatX)
#rand_values[0]=numpy.array([1e-50]*emb_size)
rand_values=load_word2vec_to_init(rand_values, rootPath+'vocab_lower_in_word2vec_embs_300d.txt')
#rand_values=load_word2vec_to_init(rand_values, rootPath+'vocab_lower_in_word2vec_embs_300d.txt')
embeddings=theano.shared(value=rand_values, borrow=True)
#nonoverlap
indices_train_nonoverlap, trainY_nonoverlap, trainLengths_nonoverlap, normalized_train_length_nonoverlap, trainLeftPad_nonoverlap, trainRightPad_nonoverlap= datasets_nonoverlap[0]
indices_train_l_nonoverlap=indices_train_nonoverlap[::2,:]
indices_train_r_nonoverlap=indices_train_nonoverlap[1::2,:]
trainLengths_l_nonoverlap=trainLengths_nonoverlap[::2]
trainLengths_r_nonoverlap=trainLengths_nonoverlap[1::2]
normalized_train_length_l_nonoverlap=normalized_train_length_nonoverlap[::2]
normalized_train_length_r_nonoverlap=normalized_train_length_nonoverlap[1::2]
trainLeftPad_l_nonoverlap=trainLeftPad_nonoverlap[::2]
trainLeftPad_r_nonoverlap=trainLeftPad_nonoverlap[1::2]
trainRightPad_l_nonoverlap=trainRightPad_nonoverlap[::2]
trainRightPad_r_nonoverlap=trainRightPad_nonoverlap[1::2]
indices_test_nonoverlap, testY_nonoverlap, testLengths_nonoverlap,normalized_test_length_nonoverlap, testLeftPad_nonoverlap, testRightPad_nonoverlap= datasets_nonoverlap[1]
indices_test_l_nonoverlap=indices_test_nonoverlap[::2,:]
indices_test_r_nonoverlap=indices_test_nonoverlap[1::2,:]
testLengths_l_nonoverlap=testLengths_nonoverlap[::2]
testLengths_r_nonoverlap=testLengths_nonoverlap[1::2]
normalized_test_length_l_nonoverlap=normalized_test_length_nonoverlap[::2]
normalized_test_length_r_nonoverlap=normalized_test_length_nonoverlap[1::2]
testLeftPad_l_nonoverlap=testLeftPad_nonoverlap[::2]
testLeftPad_r_nonoverlap=testLeftPad_nonoverlap[1::2]
testRightPad_l_nonoverlap=testRightPad_nonoverlap[::2]
testRightPad_r_nonoverlap=testRightPad_nonoverlap[1::2]
'''
n_train_batches=indices_train_l.shape[0]/batch_size
n_test_batches=indices_test_l.shape[0]/batch_size
train_batch_start=list(numpy.arange(n_train_batches)*batch_size)
test_batch_start=list(numpy.arange(n_test_batches)*batch_size)
'''
indices_train_l_nonoverlap=theano.shared(numpy.asarray(indices_train_l_nonoverlap, dtype=theano.config.floatX), borrow=True)
indices_train_r_nonoverlap=theano.shared(numpy.asarray(indices_train_r_nonoverlap, dtype=theano.config.floatX), borrow=True)
indices_test_l_nonoverlap=theano.shared(numpy.asarray(indices_test_l_nonoverlap, dtype=theano.config.floatX), borrow=True)
indices_test_r_nonoverlap=theano.shared(numpy.asarray(indices_test_r_nonoverlap, dtype=theano.config.floatX), borrow=True)
indices_train_l_nonoverlap=T.cast(indices_train_l_nonoverlap, 'int64')
indices_train_r_nonoverlap=T.cast(indices_train_r_nonoverlap, 'int64')
indices_test_l_nonoverlap=T.cast(indices_test_l_nonoverlap, 'int64')
indices_test_r_nonoverlap=T.cast(indices_test_r_nonoverlap, 'int64')
rand_values_nonoverlap=random_value_normal((vocab_size_nonoverlap+1, emb_size), theano.config.floatX, numpy.random.RandomState(1234))
rand_values_nonoverlap[0]=numpy.array(numpy.zeros(emb_size),dtype=theano.config.floatX)
#rand_values[0]=numpy.array([1e-50]*emb_size)
rand_values_nonoverlap=load_word2vec_to_init(rand_values_nonoverlap, rootPath+'vocab_nonoverlap_train_plus_dev_in_word2vec_embs_300d.txt')
#rand_values=load_word2vec_to_init(rand_values, rootPath+'vocab_lower_in_word2vec_embs_300d.txt')
embeddings_nonoverlap=theano.shared(value=rand_values_nonoverlap, borrow=True)
#cost_tmp=0
error_sum=0
# allocate symbolic variables for the data
index = T.lscalar()
x_index_l = T.lmatrix('x_index_l') # now, x is the index matrix, must be integer
x_index_l_nonoverlap = T.lmatrix('x_index_l_nonoverlap') # now, x is the index matrix, must be integer
x_index_r = T.lmatrix('x_index_r')
x_index_r_nonoverlap = T.lmatrix('x_index_r_nonoverlap')
y = T.lvector('y')
left_l=T.lscalar()
right_l=T.lscalar()
left_r=T.lscalar()
right_r=T.lscalar()
length_l=T.lscalar()
length_r=T.lscalar()
norm_length_l=T.dscalar()
norm_length_r=T.dscalar()
left_l_nonoverlap=T.lscalar()
right_l_nonoverlap=T.lscalar()
left_r_nonoverlap=T.lscalar()
right_r_nonoverlap=T.lscalar()
length_l_nonoverlap=T.lscalar()
length_r_nonoverlap=T.lscalar()
norm_length_l_nonoverlap=T.dscalar()
norm_length_r_nonoverlap=T.dscalar()
mts=T.dmatrix()
extra=T.dmatrix()
discri=T.dmatrix()
#wmf=T.dmatrix()
cost_tmp=T.dscalar()
#x=embeddings[x_index.flatten()].reshape(((batch_size*4),maxSentLength, emb_size)).transpose(0, 2, 1).flatten()
ishape = (emb_size, maxSentLength) # this is the size of MNIST images
ishape_nonoverlap = (emb_size, maxSentLength_nonoverlap)
filter_size=(emb_size,window_width)
#poolsize1=(1, ishape[1]-filter_size[1]+1) #?????????????????????????????
#length_after_wideConv=ishape[1]+filter_size[1]-1
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
# Reshape matrix of rasterized images of shape (batch_size,28*28)
# to a 4D tensor, compatible with our LeNetConvPoolLayer
#layer0_input = x.reshape(((batch_size*4), 1, ishape[0], ishape[1]))
layer0_l_input = embeddings[x_index_l.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_r_input = embeddings[x_index_r.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_l_input_nonoverlap = embeddings_nonoverlap[x_index_l_nonoverlap.flatten()].reshape((batch_size,maxSentLength_nonoverlap, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_r_input_nonoverlap = embeddings_nonoverlap[x_index_r_nonoverlap.flatten()].reshape((batch_size,maxSentLength_nonoverlap, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
conv_W, conv_b=create_conv_para(rng, filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]))
conv_W_into_matrix=conv_W.reshape((conv_W.shape[0], conv_W.shape[2]*conv_W.shape[3]))
#layer0_output = debug_print(layer0.output, 'layer0.output')
layer0_l = Conv_with_input_para(rng, input=layer0_l_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]), W=conv_W, b=conv_b)
layer0_r = Conv_with_input_para(rng, input=layer0_r_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]), W=conv_W, b=conv_b)
layer0_l_output=debug_print(layer0_l.output, 'layer0_l.output')
layer0_r_output=debug_print(layer0_r.output, 'layer0_r.output')
layer0_l_nonoverlap = Conv_with_input_para(rng, input=layer0_l_input_nonoverlap,
image_shape=(batch_size, 1, ishape_nonoverlap[0], ishape_nonoverlap[1]),
filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]), W=conv_W, b=conv_b)
layer0_r_nonoverlap = Conv_with_input_para(rng, input=layer0_r_input_nonoverlap,
image_shape=(batch_size, 1, ishape_nonoverlap[0], ishape_nonoverlap[1]),
filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]), W=conv_W, b=conv_b)
layer0_l_output_nonoverlap=debug_print(layer0_l_nonoverlap.output, 'layer0_l_nonoverlap.output')
layer0_r_output_nonoverlap=debug_print(layer0_r_nonoverlap.output, 'layer0_r_nonoverlap.output')
layer1=Average_Pooling_for_Top(rng, input_l=layer0_l_output, input_r=layer0_r_output, kern=nkerns[0],
left_l=left_l, right_l=right_l, left_r=left_r, right_r=right_r,
length_l=length_l+filter_size[1]-1, length_r=length_r+filter_size[1]-1,
dim=maxSentLength+filter_size[1]-1)
layer1_nonoverlap=Average_Pooling_for_Top(rng, input_l=layer0_l_output_nonoverlap, input_r=layer0_r_output_nonoverlap, kern=nkerns[0],
left_l=left_l_nonoverlap, right_l=right_l_nonoverlap, left_r=left_r_nonoverlap, right_r=right_r_nonoverlap,
length_l=length_l_nonoverlap+filter_size[1]-1, length_r=length_r_nonoverlap+filter_size[1]-1,
dim=maxSentLength_nonoverlap+filter_size[1]-1)
#layer2=HiddenLayer(rng, input=layer1_out, n_in=nkerns[0]*2, n_out=hidden_size, activation=T.tanh)
sum_uni_l=T.sum(layer0_l_input, axis=3).reshape((1, emb_size))
aver_uni_l=sum_uni_l/layer0_l_input.shape[3]
norm_uni_l=sum_uni_l/T.sqrt((sum_uni_l**2).sum())
sum_uni_r=T.sum(layer0_r_input, axis=3).reshape((1, emb_size))
aver_uni_r=sum_uni_r/layer0_r_input.shape[3]
norm_uni_r=sum_uni_r/T.sqrt((sum_uni_r**2).sum())
uni_cosine=cosine(sum_uni_l, sum_uni_r)
aver_uni_cosine=cosine(aver_uni_l, aver_uni_r)
uni_sigmoid_simi=debug_print(T.nnet.sigmoid(T.dot(norm_uni_l, norm_uni_r.T)).reshape((1,1)),'uni_sigmoid_simi')
linear=Linear(norm_uni_l, norm_uni_r)
poly=Poly(norm_uni_l, norm_uni_r)
sigmoid=Sigmoid(norm_uni_l, norm_uni_r)
rbf=RBF(norm_uni_l, norm_uni_r)
gesd=GESD(norm_uni_l, norm_uni_r)
eucli_1=1.0/(1.0+EUCLID(sum_uni_l, sum_uni_r))#25.2%
#eucli_1_exp=1.0/T.exp(EUCLID(sum_uni_l, sum_uni_r))
len_l=norm_length_l.reshape((1,1))
len_r=norm_length_r.reshape((1,1))
'''
len_l=length_l.reshape((1,1))
len_r=length_r.reshape((1,1))
'''
#length_gap=T.log(1+(T.sqrt((len_l-len_r)**2))).reshape((1,1))
#length_gap=T.sqrt((len_l-len_r)**2)
#layer3_input=mts
sum_uni_l_nonoverlap=T.sum(layer0_l_input_nonoverlap, axis=3).reshape((1, emb_size))
aver_uni_l_nonoverlap=sum_uni_l_nonoverlap/layer0_l_input_nonoverlap.shape[3]
norm_uni_l_nonoverlap=sum_uni_l_nonoverlap/T.sqrt((sum_uni_l_nonoverlap**2).sum())
sum_uni_r_nonoverlap=T.sum(layer0_r_input_nonoverlap, axis=3).reshape((1, emb_size))
aver_uni_r_nonoverlap=sum_uni_r_nonoverlap/layer0_r_input_nonoverlap.shape[3]
norm_uni_r_nonoverlap=sum_uni_r_nonoverlap/T.sqrt((sum_uni_r_nonoverlap**2).sum())
uni_cosine_nonoverlap=cosine(sum_uni_l_nonoverlap, sum_uni_r_nonoverlap)
aver_uni_cosine_nonoverlap=cosine(aver_uni_l_nonoverlap, aver_uni_r_nonoverlap)
uni_sigmoid_simi_nonoverlap=debug_print(T.nnet.sigmoid(T.dot(norm_uni_l_nonoverlap, norm_uni_r_nonoverlap.T)).reshape((1,1)),'uni_sigmoid_simi')
eucli_1_nonoverlap=1.0/(1.0+EUCLID(sum_uni_l_nonoverlap, sum_uni_r_nonoverlap))#25.2%
#eucli_1_exp=1.0/T.exp(EUCLID(sum_uni_l, sum_uni_r))
len_l_nonoverlap=norm_length_l_nonoverlap.reshape((1,1))
len_r_nonoverlap=norm_length_r_nonoverlap.reshape((1,1))
'''
len_l_nonoverlap=length_l_nonoverlap.reshape((1,1))
len_r_nonoverlap=length_r_nonoverlap.reshape((1,1))
'''
#length_gap=T.log(1+(T.sqrt((len_l-len_r)**2))).reshape((1,1))
#length_gap=T.sqrt((len_l-len_r)**2)
#layer3_input=mts
layer3_input=T.concatenate([mts,
eucli_1,uni_cosine,#linear, poly,sigmoid,rbf, gesd, #sum_uni_r-sum_uni_l,
eucli_1_nonoverlap,uni_cosine_nonoverlap,
layer1.output_eucli_to_simi,layer1.output_cosine, #layer1.output_vector_r-layer1.output_vector_l,
layer1_nonoverlap.output_eucli_to_simi,layer1_nonoverlap.output_cosine,
len_l, len_r,
len_l_nonoverlap, len_r_nonoverlap,
extra
#discri
#wmf
], axis=1)#, layer2.output, layer1.output_cosine], axis=1)
#layer3_input=T.concatenate([mts,eucli, uni_cosine, len_l, len_r, norm_uni_l-(norm_uni_l+norm_uni_r)/2], axis=1)
#layer3=LogisticRegression(rng, input=layer3_input, n_in=11, n_out=2)
layer3=LogisticRegression(rng, input=layer3_input, n_in=14+(2*2)+(2*2)+(2*2)+9, n_out=3)
#L2_reg =(layer3.W** 2).sum()+(layer2.W** 2).sum()+(layer1.W** 2).sum()+(conv_W** 2).sum()
L2_reg =debug_print((layer3.W** 2).sum()+(conv_W** 2).sum(), 'L2_reg')#+(layer1.W** 2).sum()++(embeddings**2).sum()
diversify_reg= Diversify_Reg(layer3.W.T)+Diversify_Reg(conv_W_into_matrix)
cost_this =debug_print(layer3.negative_log_likelihood(y), 'cost_this')#+L2_weight*L2_reg
cost=debug_print((cost_this+cost_tmp)/update_freq+L2_weight*L2_reg+Div_reg*diversify_reg, 'cost')
#cost=debug_print((cost_this+cost_tmp)/update_freq, 'cost')
test_model = theano.function([index], [layer3.errors(y),layer3_input, y],
givens={
x_index_l: indices_test_l[index: index + batch_size],
x_index_r: indices_test_r[index: index + batch_size],
y: testY[index: index + batch_size],
left_l: testLeftPad_l[index],
right_l: testRightPad_l[index],
left_r: testLeftPad_r[index],
right_r: testRightPad_r[index],
length_l: testLengths_l[index],
length_r: testLengths_r[index],
norm_length_l: normalized_test_length_l[index],
norm_length_r: normalized_test_length_r[index],
x_index_l_nonoverlap: indices_test_l_nonoverlap[index: index + batch_size],
x_index_r_nonoverlap: indices_test_r_nonoverlap[index: index + batch_size],
left_l_nonoverlap: testLeftPad_l_nonoverlap[index],
right_l_nonoverlap: testRightPad_l_nonoverlap[index],
left_r_nonoverlap: testLeftPad_r_nonoverlap[index],
right_r_nonoverlap: testRightPad_r_nonoverlap[index],
length_l_nonoverlap: testLengths_l_nonoverlap[index],
length_r_nonoverlap: testLengths_r_nonoverlap[index],
norm_length_l_nonoverlap: normalized_test_length_l_nonoverlap[index],
norm_length_r_nonoverlap: normalized_test_length_r_nonoverlap[index],
mts: mt_test[index: index + batch_size],
extra: extra_test[index: index + batch_size],
discri:discri_test[index: index + batch_size]
#wmf: wm_test[index: index + batch_size]
}, on_unused_input='ignore')
#params = layer3.params + layer2.params + layer1.params+ [conv_W, conv_b]
params = layer3.params+ [conv_W, conv_b]#+[embeddings]# + layer1.params
params_conv = [conv_W, conv_b]
accumulator=[]
for para_i in params:
eps_p=numpy.zeros_like(para_i.get_value(borrow=True),dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
grad_i=debug_print(grad_i,'grad_i')
acc = acc_i + T.sqr(grad_i)
updates.append((param_i, param_i - learning_rate * grad_i / T.sqrt(acc))) #AdaGrad
updates.append((acc_i, acc))
# def Adam(cost, params, lr=0.0002, b1=0.1, b2=0.001, e=1e-8):
# updates = []
# grads = T.grad(cost, params)
# i = theano.shared(numpy.float64(0.))
# i_t = i + 1.
# fix1 = 1. - (1. - b1)**i_t
# fix2 = 1. - (1. - b2)**i_t
# lr_t = lr * (T.sqrt(fix2) / fix1)
# for p, g in zip(params, grads):
# m = theano.shared(p.get_value() * 0.)
# v = theano.shared(p.get_value() * 0.)
# m_t = (b1 * g) + ((1. - b1) * m)
# v_t = (b2 * T.sqr(g)) + ((1. - b2) * v)
# g_t = m_t / (T.sqrt(v_t) + e)
# p_t = p - (lr_t * g_t)
# updates.append((m, m_t))
# updates.append((v, v_t))
# updates.append((p, p_t))
# updates.append((i, i_t))
# return updates
#
# updates=Adam(cost=cost, params=params, lr=0.0005)
train_model = theano.function([index,cost_tmp], cost, updates=updates,
givens={
x_index_l: indices_train_l[index: index + batch_size],
x_index_r: indices_train_r[index: index + batch_size],
y: trainY[index: index + batch_size],
left_l: trainLeftPad_l[index],
right_l: trainRightPad_l[index],
left_r: trainLeftPad_r[index],
right_r: trainRightPad_r[index],
length_l: trainLengths_l[index],
length_r: trainLengths_r[index],
norm_length_l: normalized_train_length_l[index],
norm_length_r: normalized_train_length_r[index],
x_index_l_nonoverlap: indices_train_l_nonoverlap[index: index + batch_size],
x_index_r_nonoverlap: indices_train_r_nonoverlap[index: index + batch_size],
left_l_nonoverlap: trainLeftPad_l_nonoverlap[index],
right_l_nonoverlap: trainRightPad_l_nonoverlap[index],
left_r_nonoverlap: trainLeftPad_r_nonoverlap[index],
right_r_nonoverlap: trainRightPad_r_nonoverlap[index],
length_l_nonoverlap: trainLengths_l_nonoverlap[index],
length_r_nonoverlap: trainLengths_r_nonoverlap[index],
norm_length_l_nonoverlap: normalized_train_length_l_nonoverlap[index],
norm_length_r_nonoverlap: normalized_train_length_r_nonoverlap[index],
mts: mt_train[index: index + batch_size],
extra: extra_train[index: index + batch_size],
discri:discri_train[index: index + batch_size]
#wmf: wm_train[index: index + batch_size]
}, on_unused_input='ignore')
train_model_predict = theano.function([index], [cost_this,layer3.errors(y), layer3_input, y],
givens={
x_index_l: indices_train_l[index: index + batch_size],
x_index_r: indices_train_r[index: index + batch_size],
y: trainY[index: index + batch_size],
left_l: trainLeftPad_l[index],
right_l: trainRightPad_l[index],
left_r: trainLeftPad_r[index],
right_r: trainRightPad_r[index],
length_l: trainLengths_l[index],
length_r: trainLengths_r[index],
norm_length_l: normalized_train_length_l[index],
norm_length_r: normalized_train_length_r[index],
x_index_l_nonoverlap: indices_train_l_nonoverlap[index: index + batch_size],
x_index_r_nonoverlap: indices_train_r_nonoverlap[index: index + batch_size],
left_l_nonoverlap: trainLeftPad_l_nonoverlap[index],
right_l_nonoverlap: trainRightPad_l_nonoverlap[index],
left_r_nonoverlap: trainLeftPad_r_nonoverlap[index],
right_r_nonoverlap: trainRightPad_r_nonoverlap[index],
length_l_nonoverlap: trainLengths_l_nonoverlap[index],
length_r_nonoverlap: trainLengths_r_nonoverlap[index],
norm_length_l_nonoverlap: normalized_train_length_l_nonoverlap[index],
norm_length_r_nonoverlap: normalized_train_length_r_nonoverlap[index],
mts: mt_train[index: index + batch_size],
extra: extra_train[index: index + batch_size],
discri:discri_train[index: index + batch_size]
#wmf: wm_train[index: index + batch_size]
}, on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
patience_increase = 2 # wait this much longer when a new best is
# found
improvement_threshold = 0.995 # a relative improvement of this much is
# considered significant
validation_frequency = min(n_train_batches, patience / 2)
# go through this many
# minibatche before checking the network
# on the validation set; in this case we
# check every epoch
best_params = None
best_validation_loss = numpy.inf
best_iter = 0
test_score = 0.
start_time = time.clock()
mid_time = start_time
epoch = 0
done_looping = False
max_acc=0.0
pre_max=-1
best_epoch=0
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
#for minibatch_index in xrange(n_train_batches): # each batch
minibatch_index=0
shuffle(train_batch_start)#shuffle training data
cost_tmp=0.0
for batch_start in train_batch_start:
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * n_train_batches + minibatch_index +1
minibatch_index=minibatch_index+1
#if epoch %2 ==0:
# batch_start=batch_start+remain_train
#time.sleep(0.5)
#print batch_start
if iter%update_freq != 0:
cost_ij, error_ij, layer3_input, y=train_model_predict(batch_start)
#print 'layer3_input', layer3_input
cost_tmp+=cost_ij
error_sum+=error_ij
#print 'cost_acc ',cost_acc
#print 'cost_ij ', cost_ij
#print 'cost_tmp before update',cost_tmp
else:
cost_average= train_model(batch_start,cost_tmp)
#print 'layer3_input', layer3_input
error_sum=0
cost_tmp=0.0#reset for the next batch
#print 'cost_average ', cost_average
#print 'cost_this ',cost_this
#exit(0)
#exit(0)
if iter % n_train_batches == 0:
print 'training @ iter = '+str(iter)+' average cost: '+str(cost_average)+' error: '+str(error_sum)+'/'+str(update_freq)+' error rate: '+str(error_sum*1.0/update_freq)
#if iter ==1:
# exit(0)
if iter % validation_frequency == 0:
#write_file=open('log.txt', 'w')
test_losses=[]
test_y=[]
test_features=[]
for i in test_batch_start:
test_loss, layer3_input, y=test_model(i)
#test_losses = [test_model(i) for i in test_batch_start]
test_losses.append(test_loss)
test_y.append(y[0])
test_features.append(layer3_input[0])
#write_file.write(str(pred_y[0])+'\n')#+'\t'+str(testY[i].eval())+
#write_file.close()
test_score = numpy.mean(test_losses)
test_acc=1-test_score
print(('\t\t\tepoch %i, minibatch %i/%i, test acc of best '
'model %f %%') %
(epoch, minibatch_index, n_train_batches,test_acc * 100.))
#now, see the results of LR
#write_feature=open(rootPath+'feature_check.txt', 'w')
train_y=[]
train_features=[]
count=0
for batch_start in train_batch_start:
cost_ij, error_ij, layer3_input, y=train_model_predict(batch_start)
train_y.append(y[0])
train_features.append(layer3_input[0])
#write_feature.write(str(batch_start)+' '+' '.join(map(str,layer3_input[0]))+'\n')
#count+=1
#write_feature.close()
clf = svm.SVC(kernel='linear')#OneVsRestClassifier(LinearSVC()) #linear 76.11%, poly 75.19, sigmoid 66.50, rbf 73.33
clf.fit(train_features, train_y)
results=clf.predict(test_features)
lr=linear_model.LogisticRegression(C=1e5)
lr.fit(train_features, train_y)
results_lr=lr.predict(test_features)
corr_count=0
corr_lr=0
corr_neu=0
neu_co=0
corr_ent=0
ent_co=0
corr_contr=0
contr_co=0
test_size=len(test_y)
for i in range(test_size):
if results_lr[i]==test_y[i]:
corr_lr+=1
if test_y[i]==0:#NEUTRAL
neu_co+=1
if results[i]==test_y[i]:
corr_neu+=1
elif test_y[i]==1:#ENTAILMENT
ent_co+=1
if results[i]==test_y[i]:
corr_ent+=1
elif test_y[i]==2:#CONTRADICTION
contr_co+=1
if results[i]==test_y[i]:
corr_contr+=1
#if numpy.absolute(results_lr[i]-test_y[i])<0.5:
# corr_lr+=1
corr_count=corr_neu+corr_ent+corr_contr
acc=corr_count*1.0/test_size
acc_neu=corr_neu*1.0/neu_co
acc_ent=corr_ent*1.0/ent_co
acc_contr=corr_contr*1.0/contr_co
acc_lr=corr_lr*1.0/test_size
if acc > max_acc:
max_acc=acc
best_epoch=epoch
if test_acc > max_acc:
max_acc=test_acc
best_epoch=epoch
if acc_lr> max_acc:
max_acc=acc_lr
best_epoch=epoch
print '\t\t\tsvm:', acc, 'lr:', acc_lr, 'max:', max_acc,'(at',best_epoch,')','Neu:',acc_neu, 'Ent:',acc_ent, 'Contr:',acc_contr
if max_acc > pre_max:
write_feature_train=open(rootPath+'train_feature_'+str(max_acc)+'.txt', 'w')
write_feature_test=open(rootPath+'test_feature_'+str(max_acc)+'.txt', 'w')
for i in range(len(train_features)):
write_feature_train.write(' '.join(map(str, train_features[i]))+'\n')
for i in range(len(test_features)):
write_feature_test.write(' '.join(map(str, test_features[i]))+'\n')
write_feature_train.close()
write_feature_test.close()
print 'features stored over'
pre_max=max_acc
if patience <= iter:
done_looping = True
break
print 'Epoch ', epoch, 'uses ', (time.clock()-mid_time)/60.0, 'min'
mid_time = time.clock()
#print 'Batch_size: ', update_freq
end_time = time.clock()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' +
os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(learning_rate=0.01,
n_epochs=10,
L2_weight=0.000001,
extra_size=4,
emb_size=300,
posi_emb_size=50,
batch_size=50,
filter_size=[3, 3],
maxSentLen=50,
hidden_size=300):
model_options = locals().copy()
print "model options", model_options
seed = 1234
np.random.seed(seed)
rng = np.random.RandomState(
seed) #random seed, control the model generates the same results
all_sentences_l, all_masks_l, all_sentences_r, all_masks_r, all_labels, word2id = load_SciTailV1_dataset(
maxlen=maxSentLen
) #minlen, include one label, at least one word in the sentence
# test_sents_l, test_masks_l, test_sents_r, test_masks_r, test_labels, word2id =load_ACE05_dataset(maxSentLen, word2id)
train_sents_l = np.asarray(all_sentences_l[0], dtype='int32')
dev_sents_l = np.asarray(all_sentences_l[1], dtype='int32')
test_sents_l = np.asarray(all_sentences_l[2], dtype='int32')
train_masks_l = np.asarray(all_masks_l[0], dtype=theano.config.floatX)
dev_masks_l = np.asarray(all_masks_l[1], dtype=theano.config.floatX)
test_masks_l = np.asarray(all_masks_l[2], dtype=theano.config.floatX)
train_sents_r = np.asarray(all_sentences_r[0], dtype='int32')
dev_sents_r = np.asarray(all_sentences_r[1], dtype='int32')
test_sents_r = np.asarray(all_sentences_r[2], dtype='int32')
train_masks_r = np.asarray(all_masks_r[0], dtype=theano.config.floatX)
dev_masks_r = np.asarray(all_masks_r[1], dtype=theano.config.floatX)
test_masks_r = np.asarray(all_masks_r[2], dtype=theano.config.floatX)
train_labels_store = np.asarray(all_labels[0], dtype='int32')
dev_labels_store = np.asarray(all_labels[1], dtype='int32')
test_labels_store = np.asarray(all_labels[2], dtype='int32')
train_size = len(train_labels_store)
dev_size = len(dev_labels_store)
test_size = len(test_labels_store)
print 'train size: ', train_size, ' dev size: ', dev_size, ' test size: ', test_size
vocab_size = len(word2id) + 1
rand_values = rng.normal(
0.0, 0.01,
(vocab_size, emb_size)) #generate a matrix by Gaussian distribution
#here, we leave code for loading word2vec to initialize words
rand_values[0] = np.array(np.zeros(emb_size), dtype=theano.config.floatX)
id2word = {y: x for x, y in word2id.iteritems()}
word2vec = load_word2vec()
rand_values = load_word2vec_to_init(rand_values, id2word, word2vec)
init_embeddings = theano.shared(
value=np.array(rand_values, dtype=theano.config.floatX), borrow=True
) #wrap up the python variable "rand_values" into theano variable
posi_rand_values = rng.normal(
0.0, 0.01,
(maxSentLen,
posi_emb_size)) #generate a matrix by Gaussian distribution
posi_embeddings = theano.shared(
value=np.array(posi_rand_values, dtype=theano.config.floatX),
borrow=True
) #wrap up the python variable "rand_values" into theano variable
#now, start to build the input form of the model
sents_ids_l = T.imatrix()
sents_mask_l = T.fmatrix()
sents_ids_r = T.imatrix()
sents_mask_r = T.fmatrix()
labels = T.ivector()
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
def embed_input(emb_matrix, sent_ids):
return emb_matrix[sent_ids.flatten()].reshape(
(batch_size, maxSentLen, emb_size)).dimshuffle(0, 2, 1)
embed_input_l = embed_input(
init_embeddings, sents_ids_l
) #embeddings[sents_ids_l.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1) #the input format can be adapted into CNN or GRU or LSTM
embed_input_r = embed_input(
init_embeddings, sents_ids_r
) #embeddings[sents_ids_r.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1)
'''create_AttentiveConv_params '''
conv_W, conv_b = create_conv_para(rng,
filter_shape=(hidden_size, 1, emb_size,
filter_size[0]))
conv_W_posi, conv_b_posi = create_conv_para(
rng,
filter_shape=(hidden_size, 1, emb_size + posi_emb_size,
filter_size[0]))
conv_W_context, conv_b_context = create_conv_para(
rng, filter_shape=(hidden_size, 1, emb_size, 1))
NN_para = [conv_W, conv_b, conv_W_posi, conv_b_posi, conv_W_context]
'''
attentive convolution function
'''
attentive_conv_layer = Conv_for_Pair(
rng,
origin_input_tensor3=embed_input_l,
origin_input_tensor3_r=embed_input_r,
input_tensor3=embed_input_l,
input_tensor3_r=embed_input_r,
mask_matrix=sents_mask_l,
mask_matrix_r=sents_mask_r,
image_shape=(batch_size, 1, emb_size, maxSentLen),
image_shape_r=(batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size, 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size, 1, emb_size, 1),
W=conv_W,
b=conv_b,
W_posi=conv_W_posi,
b_posi=conv_b_posi,
W_context=conv_W_context,
b_context=conv_b_context,
posi_emb_matrix=posi_embeddings,
posi_emb_size=posi_emb_size)
attentive_sent_embeddings_l = attentive_conv_layer.attentive_maxpool_vec_l
attentive_sent_embeddings_r = attentive_conv_layer.attentive_maxpool_vec_r
sent_embeddings_l = attentive_conv_layer.maxpool_vec_l
sent_embeddings_r = attentive_conv_layer.maxpool_vec_r
"form input to LR classifier"
LR_input = T.concatenate([
sent_embeddings_l, sent_embeddings_r,
sent_embeddings_l * sent_embeddings_r, attentive_sent_embeddings_l,
attentive_sent_embeddings_r,
attentive_sent_embeddings_l * attentive_sent_embeddings_r
],
axis=1)
LR_input_size = 6 * hidden_size
U_a = create_ensemble_para(
rng, 2, LR_input_size) # the weight matrix hidden_size*2
LR_b = theano.shared(value=np.zeros((2, ), dtype=theano.config.floatX),
name='LR_b',
borrow=True) #bias for each target class
LR_para = [U_a, LR_b]
layer_LR = LogisticRegression(
rng, input=LR_input, n_in=LR_input_size, n_out=2, W=U_a, b=LR_b
) #basically it is a multiplication between weight matrix and input feature vector
loss = layer_LR.negative_log_likelihood(
labels
) #for classification task, we usually used negative log likelihood as loss, the lower the better.
params = [init_embeddings, posi_embeddings] + NN_para + LR_para
# L2_reg = (init_embeddings**2).sum()+(conv_W**2).sum()+(conv_W_context**2).sum()+(U_a**2).sum()
cost = loss #+L2_weight*L2_reg
updates = Gradient_Cost_Para(cost, params, learning_rate)
train_model = theano.function(
[sents_ids_l, sents_mask_l, sents_ids_r, sents_mask_r, labels],
cost,
updates=updates,
allow_input_downcast=True,
on_unused_input='ignore')
dev_model = theano.function(
[sents_ids_l, sents_mask_l, sents_ids_r, sents_mask_r, labels],
layer_LR.errors(labels),
allow_input_downcast=True,
on_unused_input='ignore')
test_model = theano.function(
[sents_ids_l, sents_mask_l, sents_ids_r, sents_mask_r, labels],
layer_LR.errors(labels),
allow_input_downcast=True,
on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 50000000000 # look as this many examples regardless
start_time = time.time()
mid_time = start_time
past_time = mid_time
epoch = 0
done_looping = False
n_train_batches = train_size / batch_size
train_batch_start = list(
np.arange(n_train_batches) * batch_size) + [train_size - batch_size]
n_dev_batches = dev_size / batch_size
dev_batch_start = list(
np.arange(n_dev_batches) * batch_size) + [dev_size - batch_size]
n_test_batches = test_size / batch_size
test_batch_start = list(
np.arange(n_test_batches) * batch_size) + [test_size - batch_size]
max_acc_dev = 0.0
max_acc_test = 0.0
max_f1 = 0.0
cost_i = 0.0
train_indices = range(train_size)
while epoch < n_epochs:
epoch = epoch + 1
random.Random(100).shuffle(
train_indices
) #shuffle training set for each new epoch, is supposed to promote performance, but not garrenteed
iter_accu = 0
for batch_id in train_batch_start: #for each batch
iter = (epoch - 1) * n_train_batches + iter_accu + 1
iter_accu += 1
train_id_batch = train_indices[batch_id:batch_id + batch_size]
cost_i += train_model(train_sents_l[train_id_batch],
train_masks_l[train_id_batch],
train_sents_r[train_id_batch],
train_masks_r[train_id_batch],
train_labels_store[train_id_batch])
#after each 1000 batches, we test the performance of the model on all test data
if iter % 100 == 0:
print 'Epoch ', epoch, 'iter ' + str(
iter) + ' average cost: ' + str(cost_i / iter), 'uses ', (
time.time() - past_time) / 60.0, 'min'
past_time = time.time()
dev_error_sum = 0.0
for dev_batch_id in dev_batch_start: # for each test batch
dev_error_i = dev_model(
dev_sents_l[dev_batch_id:dev_batch_id + batch_size],
dev_masks_l[dev_batch_id:dev_batch_id + batch_size],
dev_sents_r[dev_batch_id:dev_batch_id + batch_size],
dev_masks_r[dev_batch_id:dev_batch_id + batch_size],
dev_labels_store[dev_batch_id:dev_batch_id +
batch_size])
dev_error_sum += dev_error_i
dev_acc = 1.0 - dev_error_sum / (len(dev_batch_start))
if dev_acc > max_acc_dev:
max_acc_dev = dev_acc
print '\tcurrent dev_acc:', dev_acc, ' ; ', '\tmax_dev_acc:', max_acc_dev
error_sum = 0.0
for idd, test_batch_id in enumerate(
test_batch_start): # for each test batch
error_i = test_model(
test_sents_l[test_batch_id:test_batch_id +
batch_size],
test_masks_l[test_batch_id:test_batch_id +
batch_size],
test_sents_r[test_batch_id:test_batch_id +
batch_size],
test_masks_r[test_batch_id:test_batch_id +
batch_size],
test_labels_store[test_batch_id:test_batch_id +
batch_size])
error_sum += error_i
test_acc = 1.0 - error_sum / (len(test_batch_start))
if test_acc > max_acc_test:
max_acc_test = test_acc
store_model_to_file(
'/home/wenpeng/workspace/SciTail/src/model_para_' +
str(max_acc_test), params)
print '\t\tcurrent acc:', test_acc, ' ; ', '\t\tmax_acc:', max_acc_test
else:
print '\tcurrent dev_acc:', dev_acc, ' ; ', '\tmax_dev_acc:', max_acc_dev
print 'Epoch ', epoch, 'uses ', (time.time() - mid_time) / 60.0, 'min'
mid_time = time.time()
#print 'Batch_size: ', update_freq
end_time = time.time()
print >> sys.stderr, ('The code for file ' + os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
return max_acc_test
def evaluate_lenet5(learning_rate=0.06,
n_epochs=2000,
nkerns=[50, 50],
batch_size=1,
window_width=[4, 4],
maxSentLength=64,
emb_size=300,
hidden_size=200,
margin=0.5,
L2_weight=0.0006,
update_freq=1,
norm_threshold=5.0,
max_truncate=40):
maxSentLength = max_truncate + 2 * (window_width[0] - 1)
model_options = locals().copy()
print "model options", model_options
rootPath = '/mounts/data/proj/wenpeng/Dataset/WikiQACorpus/'
rng = numpy.random.RandomState(23455)
datasets, vocab_size = load_wikiQA_corpus(
rootPath + 'vocab.txt', rootPath + 'WikiQA-train.txt',
rootPath + 'test_filtered.txt', max_truncate,
maxSentLength) #vocab_size contain train, dev and test
#datasets, vocab_size=load_wikiQA_corpus(rootPath+'vocab_lower_in_word2vec.txt', rootPath+'WikiQA-train.txt', rootPath+'test_filtered.txt', maxSentLength)#vocab_size contain train, dev and test
mtPath = '/mounts/data/proj/wenpeng/Dataset/WikiQACorpus/MT/BLEU_NIST/'
mt_train, mt_test = load_mts_wikiQA(
mtPath + 'result_train/concate_2mt_train.txt',
mtPath + 'result_test/concate_2mt_test.txt')
wm_train, wm_test = load_wmf_wikiQA(
rootPath + 'train_word_matching_scores.txt',
rootPath + 'test_word_matching_scores.txt')
#wm_train, wm_test=load_wmf_wikiQA(rootPath+'train_word_matching_scores_normalized.txt', rootPath+'test_word_matching_scores_normalized.txt')
indices_train, trainY, trainLengths, normalized_train_length, trainLeftPad, trainRightPad = datasets[
0]
indices_train_l = indices_train[::2, :]
indices_train_r = indices_train[1::2, :]
trainLengths_l = trainLengths[::2]
trainLengths_r = trainLengths[1::2]
normalized_train_length_l = normalized_train_length[::2]
normalized_train_length_r = normalized_train_length[1::2]
trainLeftPad_l = trainLeftPad[::2]
trainLeftPad_r = trainLeftPad[1::2]
trainRightPad_l = trainRightPad[::2]
trainRightPad_r = trainRightPad[1::2]
indices_test, testY, testLengths, normalized_test_length, testLeftPad, testRightPad = datasets[
1]
indices_test_l = indices_test[::2, :]
indices_test_r = indices_test[1::2, :]
testLengths_l = testLengths[::2]
testLengths_r = testLengths[1::2]
normalized_test_length_l = normalized_test_length[::2]
normalized_test_length_r = normalized_test_length[1::2]
testLeftPad_l = testLeftPad[::2]
testLeftPad_r = testLeftPad[1::2]
testRightPad_l = testRightPad[::2]
testRightPad_r = testRightPad[1::2]
n_train_batches = indices_train_l.shape[0] / batch_size
n_test_batches = indices_test_l.shape[0] / batch_size
train_batch_start = list(numpy.arange(n_train_batches) * batch_size)
test_batch_start = list(numpy.arange(n_test_batches) * batch_size)
indices_train_l = theano.shared(numpy.asarray(indices_train_l,
dtype=theano.config.floatX),
borrow=True)
indices_train_r = theano.shared(numpy.asarray(indices_train_r,
dtype=theano.config.floatX),
borrow=True)
indices_test_l = theano.shared(numpy.asarray(indices_test_l,
dtype=theano.config.floatX),
borrow=True)
indices_test_r = theano.shared(numpy.asarray(indices_test_r,
dtype=theano.config.floatX),
borrow=True)
indices_train_l = T.cast(indices_train_l, 'int64')
indices_train_r = T.cast(indices_train_r, 'int64')
indices_test_l = T.cast(indices_test_l, 'int64')
indices_test_r = T.cast(indices_test_r, 'int64')
rand_values = random_value_normal((vocab_size + 1, emb_size),
theano.config.floatX,
numpy.random.RandomState(1234))
rand_values[0] = numpy.array(numpy.zeros(emb_size),
dtype=theano.config.floatX)
#rand_values[0]=numpy.array([1e-50]*emb_size)
rand_values = load_word2vec_to_init(rand_values,
rootPath + 'vocab_embs_300d.txt')
#rand_values=load_word2vec_to_init(rand_values, rootPath+'vocab_lower_in_word2vec_embs_300d.txt')
embeddings = theano.shared(value=rand_values, borrow=True)
#cost_tmp=0
error_sum = 0
# allocate symbolic variables for the data
index = T.lscalar()
x_index_l = T.lmatrix(
'x_index_l') # now, x is the index matrix, must be integer
x_index_r = T.lmatrix('x_index_r')
y = T.lvector('y')
left_l = T.lscalar()
right_l = T.lscalar()
left_r = T.lscalar()
right_r = T.lscalar()
length_l = T.lscalar()
length_r = T.lscalar()
norm_length_l = T.dscalar()
norm_length_r = T.dscalar()
mts = T.dmatrix()
wmf = T.dmatrix()
cost_tmp = T.dscalar()
#x=embeddings[x_index.flatten()].reshape(((batch_size*4),maxSentLength, emb_size)).transpose(0, 2, 1).flatten()
ishape = (emb_size, maxSentLength) # this is the size of MNIST images
filter_size = (emb_size, window_width[0])
filter_size_2 = (nkerns[0], window_width[1])
#poolsize1=(1, ishape[1]-filter_size[1]+1) #?????????????????????????????
length_after_wideConv = ishape[1] + filter_size[1] - 1
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
# Reshape matrix of rasterized images of shape (batch_size,28*28)
# to a 4D tensor, compatible with our LeNetConvPoolLayer
#layer0_input = x.reshape(((batch_size*4), 1, ishape[0], ishape[1]))
layer0_l_input = embeddings[x_index_l.flatten()].reshape(
(batch_size, maxSentLength,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_r_input = embeddings[x_index_r.flatten()].reshape(
(batch_size, maxSentLength,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
conv_W, conv_b = create_conv_para(rng,
filter_shape=(nkerns[0], 1,
filter_size[0],
filter_size[1]))
load_model_from_file([conv_W, conv_b])
#layer0_output = debug_print(layer0.output, 'layer0.output')
layer0_l = Conv_with_input_para(rng,
input=layer0_l_input,
image_shape=(batch_size, 1, ishape[0],
ishape[1]),
filter_shape=(nkerns[0], 1, filter_size[0],
filter_size[1]),
W=conv_W,
b=conv_b)
layer0_r = Conv_with_input_para(rng,
input=layer0_r_input,
image_shape=(batch_size, 1, ishape[0],
ishape[1]),
filter_shape=(nkerns[0], 1, filter_size[0],
filter_size[1]),
W=conv_W,
b=conv_b)
layer0_l_output = debug_print(layer0_l.output, 'layer0_l.output')
layer0_r_output = debug_print(layer0_r.output, 'layer0_r.output')
layer0_para = [conv_W, conv_b]
layer1 = Average_Pooling(rng,
input_l=layer0_l_output,
input_r=layer0_r_output,
kern=nkerns[0],
left_l=left_l,
right_l=right_l,
left_r=left_r,
right_r=right_r,
length_l=length_l + filter_size[1] - 1,
length_r=length_r + filter_size[1] - 1,
dim=maxSentLength + filter_size[1] - 1,
window_size=window_width[0],
maxSentLength=maxSentLength)
conv2_W, conv2_b = create_conv_para(rng,
filter_shape=(nkerns[1], 1,
filter_size_2[0],
filter_size_2[1]))
#load_model_from_file([conv2_W, conv2_b])
layer2_l = Conv_with_input_para(
rng,
input=layer1.output_tensor_l,
image_shape=(batch_size, 1, nkerns[0], ishape[1]),
filter_shape=(nkerns[1], 1, filter_size_2[0], filter_size_2[1]),
W=conv2_W,
b=conv2_b)
layer2_r = Conv_with_input_para(
rng,
input=layer1.output_tensor_r,
image_shape=(batch_size, 1, nkerns[0], ishape[1]),
filter_shape=(nkerns[1], 1, filter_size_2[0], filter_size_2[1]),
W=conv2_W,
b=conv2_b)
layer2_para = [conv2_W, conv2_b]
layer3 = Average_Pooling_for_Top(rng,
input_l=layer2_l.output,
input_r=layer2_r.output,
kern=nkerns[1],
left_l=left_l,
right_l=right_l,
left_r=left_r,
right_r=right_r,
length_l=length_l + filter_size_2[1] - 1,
length_r=length_r + filter_size_2[1] - 1,
dim=maxSentLength + filter_size_2[1] - 1)
#layer2=HiddenLayer(rng, input=layer1_out, n_in=nkerns[0]*2, n_out=hidden_size, activation=T.tanh)
sum_uni_l = T.sum(layer0_l_input, axis=3).reshape((1, emb_size))
aver_uni_l = sum_uni_l / layer0_l_input.shape[3]
norm_uni_l = sum_uni_l / T.sqrt((sum_uni_l**2).sum())
sum_uni_r = T.sum(layer0_r_input, axis=3).reshape((1, emb_size))
aver_uni_r = sum_uni_r / layer0_r_input.shape[3]
norm_uni_r = sum_uni_r / T.sqrt((sum_uni_r**2).sum())
uni_cosine = cosine(sum_uni_l, sum_uni_r)
aver_uni_cosine = cosine(aver_uni_l, aver_uni_r)
uni_sigmoid_simi = debug_print(
T.nnet.sigmoid(T.dot(norm_uni_l, norm_uni_r.T)).reshape((1, 1)),
'uni_sigmoid_simi')
'''
linear=Linear(sum_uni_l, sum_uni_r)
poly=Poly(sum_uni_l, sum_uni_r)
sigmoid=Sigmoid(sum_uni_l, sum_uni_r)
rbf=RBF(sum_uni_l, sum_uni_r)
gesd=GESD(sum_uni_l, sum_uni_r)
'''
eucli_1 = 1.0 / (1.0 + EUCLID(sum_uni_l, sum_uni_r)) #25.2%
#eucli_1_exp=1.0/T.exp(EUCLID(sum_uni_l, sum_uni_r))
len_l = norm_length_l.reshape((1, 1))
len_r = norm_length_r.reshape((1, 1))
'''
len_l=length_l.reshape((1,1))
len_r=length_r.reshape((1,1))
'''
#length_gap=T.log(1+(T.sqrt((len_l-len_r)**2))).reshape((1,1))
#length_gap=T.sqrt((len_l-len_r)**2)
#layer3_input=mts
layer3_input = T.concatenate(
[ #mts,
uni_cosine, #eucli_1_exp,#uni_sigmoid_simi, #norm_uni_l-(norm_uni_l+norm_uni_r)/2,#uni_cosine, #
layer1.
output_cosine, #layer1.output_eucli_to_simi_exp,#layer1.output_sigmoid_simi,#layer1.output_vector_l-(layer1.output_vector_l+layer1.output_vector_r)/2,#layer1.output_cosine, #
layer3.output_cosine,
len_l,
len_r,
wmf
],
axis=1) #, layer2.output, layer1.output_cosine], axis=1)
#layer3_input=T.concatenate([mts,eucli, uni_cosine, len_l, len_r, norm_uni_l-(norm_uni_l+norm_uni_r)/2], axis=1)
#layer3=LogisticRegression(rng, input=layer3_input, n_in=11, n_out=2)
layer3 = LogisticRegression(rng,
input=layer3_input,
n_in=(1) + (1) + (1) + 2 + 2,
n_out=2)
#L2_reg =(layer3.W** 2).sum()+(layer2.W** 2).sum()+(layer1.W** 2).sum()+(conv_W** 2).sum()
L2_reg = debug_print(
(layer3.W**2).sum() + (conv2_W**2).sum(), 'L2_reg'
) #+(conv_W** 2).sum()+(layer1.W** 2).sum()++(embeddings**2).sum()
cost_this = debug_print(layer3.negative_log_likelihood(y),
'cost_this') #+L2_weight*L2_reg
cost = debug_print(
(cost_this + cost_tmp) / update_freq + L2_weight * L2_reg, 'cost')
#cost=debug_print((cost_this+cost_tmp)/update_freq, 'cost')
test_model = theano.function(
[index], [layer3.prop_for_posi, layer3_input, y],
givens={
x_index_l: indices_test_l[index:index + batch_size],
x_index_r: indices_test_r[index:index + batch_size],
y: testY[index:index + batch_size],
left_l: testLeftPad_l[index],
right_l: testRightPad_l[index],
left_r: testLeftPad_r[index],
right_r: testRightPad_r[index],
length_l: testLengths_l[index],
length_r: testLengths_r[index],
norm_length_l: normalized_test_length_l[index],
norm_length_r: normalized_test_length_r[index],
mts: mt_test[index:index + batch_size],
wmf: wm_test[index:index + batch_size]
},
on_unused_input='ignore')
#params = layer3.params + layer2.params + layer1.params+ [conv_W, conv_b]
params = layer3.params + layer2_para #+layer0_para
accumulator = []
for para_i in params:
eps_p = numpy.zeros_like(para_i.get_value(borrow=True),
dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
grad_i = debug_print(grad_i, 'grad_i')
acc = acc_i + T.sqr(grad_i)
updates.append(
(param_i,
param_i - learning_rate * grad_i / T.sqrt(acc))) #AdaGrad
updates.append((acc_i, acc))
train_model = theano.function(
[index, cost_tmp],
cost,
updates=updates,
givens={
x_index_l: indices_train_l[index:index + batch_size],
x_index_r: indices_train_r[index:index + batch_size],
y: trainY[index:index + batch_size],
left_l: trainLeftPad_l[index],
right_l: trainRightPad_l[index],
left_r: trainLeftPad_r[index],
right_r: trainRightPad_r[index],
length_l: trainLengths_l[index],
length_r: trainLengths_r[index],
norm_length_l: normalized_train_length_l[index],
norm_length_r: normalized_train_length_r[index],
mts: mt_train[index:index + batch_size],
wmf: wm_train[index:index + batch_size]
},
on_unused_input='ignore')
train_model_predict = theano.function(
[index], [cost_this, layer3.errors(y), layer3_input, y],
givens={
x_index_l: indices_train_l[index:index + batch_size],
x_index_r: indices_train_r[index:index + batch_size],
y: trainY[index:index + batch_size],
left_l: trainLeftPad_l[index],
right_l: trainRightPad_l[index],
left_r: trainLeftPad_r[index],
right_r: trainRightPad_r[index],
length_l: trainLengths_l[index],
length_r: trainLengths_r[index],
norm_length_l: normalized_train_length_l[index],
norm_length_r: normalized_train_length_r[index],
mts: mt_train[index:index + batch_size],
wmf: wm_train[index:index + batch_size]
},
on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
patience_increase = 2 # wait this much longer when a new best is
# found
improvement_threshold = 0.995 # a relative improvement of this much is
# considered significant
validation_frequency = min(n_train_batches / 5, patience / 2)
# go through this many
# minibatche before checking the network
# on the validation set; in this case we
# check every epoch
best_params = None
best_validation_loss = numpy.inf
best_iter = 0
test_score = 0.
start_time = time.clock()
epoch = 0
done_looping = False
svm_max = 0.0
best_epoch = 0
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
#for minibatch_index in xrange(n_train_batches): # each batch
minibatch_index = 0
#shuffle(train_batch_start)#shuffle training data
cost_tmp = 0.0
for batch_start in train_batch_start:
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * n_train_batches + minibatch_index + 1
minibatch_index = minibatch_index + 1
#if epoch %2 ==0:
# batch_start=batch_start+remain_train
#time.sleep(0.5)
#print batch_start
if iter % update_freq != 0:
cost_ij, error_ij, layer3_input, y = train_model_predict(
batch_start)
#print 'layer3_input', layer3_input
cost_tmp += cost_ij
error_sum += error_ij
#print 'cost_acc ',cost_acc
#print 'cost_ij ', cost_ij
#print 'cost_tmp before update',cost_tmp
else:
cost_average = train_model(batch_start, cost_tmp)
#print 'layer3_input', layer3_input
error_sum = 0
cost_tmp = 0.0 #reset for the next batch
#print 'cost_average ', cost_average
#print 'cost_this ',cost_this
#exit(0)
#exit(0)
if iter % n_train_batches == 0:
print 'training @ iter = ' + str(
iter) + ' average cost: ' + str(
cost_average) + ' error: ' + str(
error_sum) + '/' + str(
update_freq) + ' error rate: ' + str(
error_sum * 1.0 / update_freq)
#if iter ==1:
# exit(0)
if iter % validation_frequency == 0:
#write_file=open('log.txt', 'w')
test_probs = []
test_y = []
test_features = []
for i in test_batch_start:
prob_i, layer3_input, y = test_model(i)
#test_losses = [test_model(i) for i in test_batch_start]
test_probs.append(prob_i[0][0])
test_y.append(y[0])
test_features.append(layer3_input[0])
MAP, MRR = compute_map_mrr(rootPath + 'test_filtered.txt',
test_probs)
#now, check MAP and MRR
print(
('\t\t\t\t\t\tepoch %i, minibatch %i/%i, test MAP of best '
'model %f, MRR %f') %
(epoch, minibatch_index, n_train_batches, MAP, MRR))
#now, see the results of LR
#write_feature=open(rootPath+'feature_check.txt', 'w')
train_y = []
train_features = []
count = 0
for batch_start in train_batch_start:
cost_ij, error_ij, layer3_input, y = train_model_predict(
batch_start)
train_y.append(y[0])
train_features.append(layer3_input[0])
#write_feature.write(str(batch_start)+' '+' '.join(map(str,layer3_input[0]))+'\n')
#count+=1
#write_feature.close()
clf = svm.SVC(C=1.0, kernel='linear')
clf.fit(train_features, train_y)
results_svm = clf.decision_function(test_features)
MAP_svm, MRR_svm = compute_map_mrr(
rootPath + 'test_filtered.txt', results_svm)
lr = LinearRegression().fit(train_features, train_y)
results_lr = lr.predict(test_features)
MAP_lr, MRR_lr = compute_map_mrr(
rootPath + 'test_filtered.txt', results_lr)
print '\t\t\t\t\t\t\tSVM, MAP: ', MAP_svm, ' MRR: ', MRR_svm, ' LR: ', MAP_lr, ' MRR: ', MRR_lr
if patience <= iter:
done_looping = True
break
#after each epoch, increase the batch_size
if epoch % 2 == 1:
update_freq = update_freq * 1
else:
update_freq = update_freq / 1
#print 'Batch_size: ', update_freq
end_time = time.clock()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' + os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(learning_rate=0.05,
n_epochs=2000,
nkerns=[90, 90],
batch_size=1,
window_width=2,
maxSentLength=64,
maxDocLength=60,
emb_size=50,
hidden_size=200,
L2_weight=0.0065,
update_freq=1,
norm_threshold=5.0,
max_s_length=57,
max_d_length=59,
margin=0.2):
maxSentLength = max_s_length + 2 * (window_width - 1)
maxDocLength = max_d_length + 2 * (window_width - 1)
model_options = locals().copy()
print "model options", model_options
rootPath = '/mounts/data/proj/wenpeng/Dataset/MCTest/'
rng = numpy.random.RandomState(23455)
train_data, train_size, test_data, test_size, vocab_size = load_MCTest_corpus_DSSSS(
rootPath + 'vocab_DSSSS.txt', rootPath +
'mc500.train.tsv_standardlized.txt_with_state.txt_DSSSS.txt',
rootPath + 'mc500.test.tsv_standardlized.txt_with_state.txt_DSSSS.txt',
max_s_length, maxSentLength,
maxDocLength) #vocab_size contain train, dev and test
#datasets_nonoverlap, vocab_size_nonoverlap=load_SICK_corpus(rootPath+'vocab_nonoverlap_train_plus_dev.txt', rootPath+'train_plus_dev_removed_overlap_as_training.txt', rootPath+'test_removed_overlap_as_training.txt', max_truncate_nonoverlap,maxSentLength_nonoverlap, entailment=True)
#datasets, vocab_size=load_wikiQA_corpus(rootPath+'vocab_lower_in_word2vec.txt', rootPath+'WikiQA-train.txt', rootPath+'test_filtered.txt', maxSentLength)#vocab_size contain train, dev and test
#mtPath='/mounts/data/proj/wenpeng/Dataset/WikiQACorpus/MT/BLEU_NIST/'
# mt_train, mt_test=load_mts_wikiQA(rootPath+'Train_plus_dev_MT/concate_14mt_train.txt', rootPath+'Test_MT/concate_14mt_test.txt')
# extra_train, extra_test=load_extra_features(rootPath+'train_plus_dev_rule_features_cosine_eucli_negation_len1_len2_syn_hyper1_hyper2_anto(newsimi0.4).txt', rootPath+'test_rule_features_cosine_eucli_negation_len1_len2_syn_hyper1_hyper2_anto(newsimi0.4).txt')
# discri_train, discri_test=load_extra_features(rootPath+'train_plus_dev_discri_features_0.3.txt', rootPath+'test_discri_features_0.3.txt')
#wm_train, wm_test=load_wmf_wikiQA(rootPath+'train_word_matching_scores.txt', rootPath+'test_word_matching_scores.txt')
#wm_train, wm_test=load_wmf_wikiQA(rootPath+'train_word_matching_scores_normalized.txt', rootPath+'test_word_matching_scores_normalized.txt')
# results=[numpy.array(data_D), numpy.array(data_Q), numpy.array(data_A1), numpy.array(data_A2), numpy.array(data_A3), numpy.array(data_A4), numpy.array(Label),
# numpy.array(Length_D),numpy.array(Length_D_s), numpy.array(Length_Q), numpy.array(Length_A1), numpy.array(Length_A2), numpy.array(Length_A3), numpy.array(Length_A4),
# numpy.array(leftPad_D),numpy.array(leftPad_D_s), numpy.array(leftPad_Q), numpy.array(leftPad_A1), numpy.array(leftPad_A2), numpy.array(leftPad_A3), numpy.array(leftPad_A4),
# numpy.array(rightPad_D),numpy.array(rightPad_D_s), numpy.array(rightPad_Q), numpy.array(rightPad_A1), numpy.array(rightPad_A2), numpy.array(rightPad_A3), numpy.array(rightPad_A4)]
# return results, line_control
[
train_data_D, train_data_A1, train_data_A2, train_data_A3,
train_data_A4, train_Label, train_Length_D, train_Length_D_s,
train_Length_A1, train_Length_A2, train_Length_A3, train_Length_A4,
train_leftPad_D, train_leftPad_D_s, train_leftPad_A1, train_leftPad_A2,
train_leftPad_A3, train_leftPad_A4, train_rightPad_D,
train_rightPad_D_s, train_rightPad_A1, train_rightPad_A2,
train_rightPad_A3, train_rightPad_A4
] = train_data
[
test_data_D, test_data_A1, test_data_A2, test_data_A3, test_data_A4,
test_Label, test_Length_D, test_Length_D_s, test_Length_A1,
test_Length_A2, test_Length_A3, test_Length_A4, test_leftPad_D,
test_leftPad_D_s, test_leftPad_A1, test_leftPad_A2, test_leftPad_A3,
test_leftPad_A4, test_rightPad_D, test_rightPad_D_s, test_rightPad_A1,
test_rightPad_A2, test_rightPad_A3, test_rightPad_A4
] = test_data
n_train_batches = train_size / batch_size
n_test_batches = test_size / batch_size
train_batch_start = list(numpy.arange(n_train_batches) * batch_size)
test_batch_start = list(numpy.arange(n_test_batches) * batch_size)
# indices_train_l=theano.shared(numpy.asarray(indices_train_l, dtype=theano.config.floatX), borrow=True)
# indices_train_r=theano.shared(numpy.asarray(indices_train_r, dtype=theano.config.floatX), borrow=True)
# indices_test_l=theano.shared(numpy.asarray(indices_test_l, dtype=theano.config.floatX), borrow=True)
# indices_test_r=theano.shared(numpy.asarray(indices_test_r, dtype=theano.config.floatX), borrow=True)
# indices_train_l=T.cast(indices_train_l, 'int64')
# indices_train_r=T.cast(indices_train_r, 'int64')
# indices_test_l=T.cast(indices_test_l, 'int64')
# indices_test_r=T.cast(indices_test_r, 'int64')
rand_values = random_value_normal((vocab_size + 1, emb_size),
theano.config.floatX,
numpy.random.RandomState(1234))
rand_values[0] = numpy.array(numpy.zeros(emb_size),
dtype=theano.config.floatX)
#rand_values[0]=numpy.array([1e-50]*emb_size)
rand_values = load_word2vec_to_init(rand_values,
rootPath + 'vocab_glove_50d.txt')
#rand_values=load_word2vec_to_init(rand_values, rootPath+'vocab_lower_in_word2vec_embs_300d.txt')
embeddings = theano.shared(value=rand_values, borrow=True)
#cost_tmp=0
error_sum = 0
# allocate symbolic variables for the data
index = T.lscalar()
index_D = T.lmatrix() # now, x is the index matrix, must be integer
# index_Q = T.lvector()
index_A1 = T.lvector()
index_A2 = T.lvector()
index_A3 = T.lvector()
index_A4 = T.lvector()
# y = T.lvector()
len_D = T.lscalar()
len_D_s = T.lvector()
# len_Q=T.lscalar()
len_A1 = T.lscalar()
len_A2 = T.lscalar()
len_A3 = T.lscalar()
len_A4 = T.lscalar()
left_D = T.lscalar()
left_D_s = T.lvector()
# left_Q=T.lscalar()
left_A1 = T.lscalar()
left_A2 = T.lscalar()
left_A3 = T.lscalar()
left_A4 = T.lscalar()
right_D = T.lscalar()
right_D_s = T.lvector()
# right_Q=T.lscalar()
right_A1 = T.lscalar()
right_A2 = T.lscalar()
right_A3 = T.lscalar()
right_A4 = T.lscalar()
#x=embeddings[x_index.flatten()].reshape(((batch_size*4),maxSentLength, emb_size)).transpose(0, 2, 1).flatten()
ishape = (emb_size, maxSentLength) # sentence shape
dshape = (nkerns[0], maxDocLength) # doc shape
filter_words = (emb_size, window_width)
filter_sents = (nkerns[0], window_width)
#poolsize1=(1, ishape[1]-filter_size[1]+1) #?????????????????????????????
# length_after_wideConv=ishape[1]+filter_size[1]-1
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
# Reshape matrix of rasterized images of shape (batch_size,28*28)
# to a 4D tensor, compatible with our LeNetConvPoolLayer
#layer0_input = x.reshape(((batch_size*4), 1, ishape[0], ishape[1]))
layer0_D_input = embeddings[index_D.flatten()].reshape(
(maxDocLength, maxSentLength,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
# layer0_Q_input = embeddings[index_Q.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_A1_input = embeddings[index_A1.flatten()].reshape(
(batch_size, maxSentLength,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_A2_input = embeddings[index_A2.flatten()].reshape(
(batch_size, maxSentLength,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_A3_input = embeddings[index_A3.flatten()].reshape(
(batch_size, maxSentLength,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_A4_input = embeddings[index_A4.flatten()].reshape(
(batch_size, maxSentLength,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
conv_W, conv_b = create_conv_para(rng,
filter_shape=(nkerns[0], 1,
filter_words[0],
filter_words[1]))
layer0_para = [conv_W, conv_b]
conv2_W, conv2_b = create_conv_para(rng,
filter_shape=(nkerns[1], 1, nkerns[0],
filter_sents[1]))
layer2_para = [conv2_W, conv2_b]
high_W, high_b = create_highw_para(rng, nkerns[0], nkerns[1])
highW_para = [high_W, high_b]
params = layer2_para + layer0_para + highW_para #+[embeddings]
#load_model(params)
layer0_D = Conv_with_input_para(
rng,
input=layer0_D_input,
image_shape=(maxDocLength, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]),
W=conv_W,
b=conv_b)
# layer0_Q = Conv_with_input_para(rng, input=layer0_Q_input,
# image_shape=(batch_size, 1, ishape[0], ishape[1]),
# filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]), W=conv_W, b=conv_b)
layer0_A1 = Conv_with_input_para(
rng,
input=layer0_A1_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]),
W=conv_W,
b=conv_b)
layer0_A2 = Conv_with_input_para(
rng,
input=layer0_A2_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]),
W=conv_W,
b=conv_b)
layer0_A3 = Conv_with_input_para(
rng,
input=layer0_A3_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]),
W=conv_W,
b=conv_b)
layer0_A4 = Conv_with_input_para(
rng,
input=layer0_A4_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]),
W=conv_W,
b=conv_b)
layer0_D_output = debug_print(layer0_D.output, 'layer0_D.output')
# layer0_Q_output=debug_print(layer0_Q.output, 'layer0_Q.output')
layer0_A1_output = debug_print(layer0_A1.output, 'layer0_A1.output')
layer0_A2_output = debug_print(layer0_A2.output, 'layer0_A2.output')
layer0_A3_output = debug_print(layer0_A3.output, 'layer0_A3.output')
layer0_A4_output = debug_print(layer0_A4.output, 'layer0_A4.output')
# layer1_DQ=Average_Pooling_Scan(rng, input_D=layer0_D_output, input_r=layer0_Q_output, kern=nkerns[0],
# left_D=left_D, right_D=right_D,
# left_D_s=left_D_s, right_D_s=right_D_s, left_r=left_Q, right_r=right_Q,
# length_D_s=len_D_s+filter_words[1]-1, length_r=len_Q+filter_words[1]-1,
# dim=maxSentLength+filter_words[1]-1, doc_len=maxDocLength, topk=3)
layer1_DA1 = Average_Pooling_Scan(rng,
input_D=layer0_D_output,
input_r=layer0_A1_output,
kern=nkerns[0],
left_D=left_D,
right_D=right_D,
left_D_s=left_D_s,
right_D_s=right_D_s,
left_r=left_A1,
right_r=right_A1,
length_D_s=len_D_s + filter_words[1] - 1,
length_r=len_A1 + filter_words[1] - 1,
dim=maxSentLength + filter_words[1] - 1,
doc_len=maxDocLength,
topk=3)
layer1_DA2 = Average_Pooling_Scan(rng,
input_D=layer0_D_output,
input_r=layer0_A2_output,
kern=nkerns[0],
left_D=left_D,
right_D=right_D,
left_D_s=left_D_s,
right_D_s=right_D_s,
left_r=left_A2,
right_r=right_A2,
length_D_s=len_D_s + filter_words[1] - 1,
length_r=len_A2 + filter_words[1] - 1,
dim=maxSentLength + filter_words[1] - 1,
doc_len=maxDocLength,
topk=3)
layer1_DA3 = Average_Pooling_Scan(rng,
input_D=layer0_D_output,
input_r=layer0_A3_output,
kern=nkerns[0],
left_D=left_D,
right_D=right_D,
left_D_s=left_D_s,
right_D_s=right_D_s,
left_r=left_A3,
right_r=right_A3,
length_D_s=len_D_s + filter_words[1] - 1,
length_r=len_A3 + filter_words[1] - 1,
dim=maxSentLength + filter_words[1] - 1,
doc_len=maxDocLength,
topk=3)
layer1_DA4 = Average_Pooling_Scan(rng,
input_D=layer0_D_output,
input_r=layer0_A4_output,
kern=nkerns[0],
left_D=left_D,
right_D=right_D,
left_D_s=left_D_s,
right_D_s=right_D_s,
left_r=left_A4,
right_r=right_A4,
length_D_s=len_D_s + filter_words[1] - 1,
length_r=len_A4 + filter_words[1] - 1,
dim=maxSentLength + filter_words[1] - 1,
doc_len=maxDocLength,
topk=3)
#load_model_for_conv2([conv2_W, conv2_b])#this can not be used, as the nkerns[0]!=filter_size[0]
#conv from sentence to doc
# layer2_DQ = Conv_with_input_para(rng, input=layer1_DQ.output_D.reshape((batch_size, 1, nkerns[0], dshape[1])),
# image_shape=(batch_size, 1, nkerns[0], dshape[1]),
# filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
layer2_DA1 = Conv_with_input_para(
rng,
input=layer1_DA1.output_D.reshape(
(batch_size, 1, nkerns[0], dshape[1])),
image_shape=(batch_size, 1, nkerns[0], dshape[1]),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]),
W=conv2_W,
b=conv2_b)
layer2_DA2 = Conv_with_input_para(
rng,
input=layer1_DA2.output_D.reshape(
(batch_size, 1, nkerns[0], dshape[1])),
image_shape=(batch_size, 1, nkerns[0], dshape[1]),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]),
W=conv2_W,
b=conv2_b)
layer2_DA3 = Conv_with_input_para(
rng,
input=layer1_DA3.output_D.reshape(
(batch_size, 1, nkerns[0], dshape[1])),
image_shape=(batch_size, 1, nkerns[0], dshape[1]),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]),
W=conv2_W,
b=conv2_b)
layer2_DA4 = Conv_with_input_para(
rng,
input=layer1_DA4.output_D.reshape(
(batch_size, 1, nkerns[0], dshape[1])),
image_shape=(batch_size, 1, nkerns[0], dshape[1]),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]),
W=conv2_W,
b=conv2_b)
#conv single Q and A into doc level with same conv weights
# layer2_Q = Conv_with_input_para_one_col_featuremap(rng, input=layer1_DQ.output_QA_sent_level_rep.reshape((batch_size, 1, nkerns[0], 1)),
# image_shape=(batch_size, 1, nkerns[0], 1),
# filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
layer2_A1 = Conv_with_input_para_one_col_featuremap(
rng,
input=layer1_DA1.output_QA_sent_level_rep.reshape(
(batch_size, 1, nkerns[0], 1)),
image_shape=(batch_size, 1, nkerns[0], 1),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]),
W=conv2_W,
b=conv2_b)
layer2_A2 = Conv_with_input_para_one_col_featuremap(
rng,
input=layer1_DA2.output_QA_sent_level_rep.reshape(
(batch_size, 1, nkerns[0], 1)),
image_shape=(batch_size, 1, nkerns[0], 1),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]),
W=conv2_W,
b=conv2_b)
layer2_A3 = Conv_with_input_para_one_col_featuremap(
rng,
input=layer1_DA3.output_QA_sent_level_rep.reshape(
(batch_size, 1, nkerns[0], 1)),
image_shape=(batch_size, 1, nkerns[0], 1),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]),
W=conv2_W,
b=conv2_b)
layer2_A4 = Conv_with_input_para_one_col_featuremap(
rng,
input=layer1_DA4.output_QA_sent_level_rep.reshape(
(batch_size, 1, nkerns[0], 1)),
image_shape=(batch_size, 1, nkerns[0], 1),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]),
W=conv2_W,
b=conv2_b)
# layer2_Q_output_sent_rep_Dlevel=debug_print(layer2_Q.output_sent_rep_Dlevel, 'layer2_Q.output_sent_rep_Dlevel')
layer2_A1_output_sent_rep_Dlevel = debug_print(
layer2_A1.output_sent_rep_Dlevel, 'layer2_A1.output_sent_rep_Dlevel')
layer2_A2_output_sent_rep_Dlevel = debug_print(
layer2_A2.output_sent_rep_Dlevel, 'layer2_A2.output_sent_rep_Dlevel')
layer2_A3_output_sent_rep_Dlevel = debug_print(
layer2_A3.output_sent_rep_Dlevel, 'layer2_A3.output_sent_rep_Dlevel')
layer2_A4_output_sent_rep_Dlevel = debug_print(
layer2_A4.output_sent_rep_Dlevel, 'layer2_A4.output_sent_rep_Dlevel')
# layer3_DQ=Average_Pooling_for_Top(rng, input_l=layer2_DQ.output, input_r=layer2_Q_output_sent_rep_Dlevel, kern=nkerns[1],
# left_l=left_D, right_l=right_D, left_r=0, right_r=0,
# length_l=len_D+filter_sents[1]-1, length_r=1,
# dim=maxDocLength+filter_sents[1]-1, topk=3)
layer3_DA1 = Average_Pooling_for_Top(
rng,
input_l=layer2_DA1.output,
input_r=layer2_A1_output_sent_rep_Dlevel,
kern=nkerns[1],
left_l=left_D,
right_l=right_D,
left_r=0,
right_r=0,
length_l=len_D + filter_sents[1] - 1,
length_r=1,
dim=maxDocLength + filter_sents[1] - 1,
topk=3)
layer3_DA2 = Average_Pooling_for_Top(
rng,
input_l=layer2_DA2.output,
input_r=layer2_A2_output_sent_rep_Dlevel,
kern=nkerns[1],
left_l=left_D,
right_l=right_D,
left_r=0,
right_r=0,
length_l=len_D + filter_sents[1] - 1,
length_r=1,
dim=maxDocLength + filter_sents[1] - 1,
topk=3)
layer3_DA3 = Average_Pooling_for_Top(
rng,
input_l=layer2_DA3.output,
input_r=layer2_A3_output_sent_rep_Dlevel,
kern=nkerns[1],
left_l=left_D,
right_l=right_D,
left_r=0,
right_r=0,
length_l=len_D + filter_sents[1] - 1,
length_r=1,
dim=maxDocLength + filter_sents[1] - 1,
topk=3)
layer3_DA4 = Average_Pooling_for_Top(
rng,
input_l=layer2_DA4.output,
input_r=layer2_A4_output_sent_rep_Dlevel,
kern=nkerns[1],
left_l=left_D,
right_l=right_D,
left_r=0,
right_r=0,
length_l=len_D + filter_sents[1] - 1,
length_r=1,
dim=maxDocLength + filter_sents[1] - 1,
topk=3)
#high-way
# transform_gate_DQ=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DQ.output_D_sent_level_rep) + high_b), 'transform_gate_DQ')
transform_gate_DA1 = debug_print(
T.nnet.sigmoid(
T.dot(high_W, layer1_DA1.output_D_sent_level_rep) + high_b),
'transform_gate_DA1')
transform_gate_DA2 = debug_print(
T.nnet.sigmoid(
T.dot(high_W, layer1_DA2.output_D_sent_level_rep) + high_b),
'transform_gate_DA2')
transform_gate_DA3 = debug_print(
T.nnet.sigmoid(
T.dot(high_W, layer1_DA3.output_D_sent_level_rep) + high_b),
'transform_gate_DA3')
transform_gate_DA4 = debug_print(
T.nnet.sigmoid(
T.dot(high_W, layer1_DA4.output_D_sent_level_rep) + high_b),
'transform_gate_DA4')
# transform_gate_Q=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DQ.output_QA_sent_level_rep) + high_b), 'transform_gate_Q')
transform_gate_A1 = debug_print(
T.nnet.sigmoid(
T.dot(high_W, layer1_DA1.output_QA_sent_level_rep) + high_b),
'transform_gate_A1')
transform_gate_A2 = debug_print(
T.nnet.sigmoid(
T.dot(high_W, layer1_DA2.output_QA_sent_level_rep) + high_b),
'transform_gate_A2')
transform_gate_A3 = debug_print(
T.nnet.sigmoid(
T.dot(high_W, layer1_DA3.output_QA_sent_level_rep) + high_b),
'transform_gate_A3')
transform_gate_A4 = debug_print(
T.nnet.sigmoid(
T.dot(high_W, layer1_DA4.output_QA_sent_level_rep) + high_b),
'transform_gate_A4')
# overall_D_Q=debug_print((1.0-transform_gate_DQ)*layer1_DQ.output_D_sent_level_rep+transform_gate_DQ*layer3_DQ.output_D_doc_level_rep, 'overall_D_Q')
overall_D_A1 = (
1.0 - transform_gate_DA1
) * layer1_DA1.output_D_sent_level_rep + transform_gate_DA1 * layer3_DA1.output_D_doc_level_rep
overall_D_A2 = (
1.0 - transform_gate_DA2
) * layer1_DA2.output_D_sent_level_rep + transform_gate_DA2 * layer3_DA2.output_D_doc_level_rep
overall_D_A3 = (
1.0 - transform_gate_DA3
) * layer1_DA3.output_D_sent_level_rep + transform_gate_DA3 * layer3_DA3.output_D_doc_level_rep
overall_D_A4 = (
1.0 - transform_gate_DA4
) * layer1_DA4.output_D_sent_level_rep + transform_gate_DA4 * layer3_DA4.output_D_doc_level_rep
# overall_Q=(1.0-transform_gate_Q)*layer1_DQ.output_QA_sent_level_rep+transform_gate_Q*layer2_Q.output_sent_rep_Dlevel
overall_A1 = (
1.0 - transform_gate_A1
) * layer1_DA1.output_QA_sent_level_rep + transform_gate_A1 * layer2_A1.output_sent_rep_Dlevel
overall_A2 = (
1.0 - transform_gate_A2
) * layer1_DA2.output_QA_sent_level_rep + transform_gate_A2 * layer2_A2.output_sent_rep_Dlevel
overall_A3 = (
1.0 - transform_gate_A3
) * layer1_DA3.output_QA_sent_level_rep + transform_gate_A3 * layer2_A3.output_sent_rep_Dlevel
overall_A4 = (
1.0 - transform_gate_A4
) * layer1_DA4.output_QA_sent_level_rep + transform_gate_A4 * layer2_A4.output_sent_rep_Dlevel
simi_sent_level1 = debug_print(
cosine(layer1_DA1.output_D_sent_level_rep,
layer1_DA1.output_QA_sent_level_rep), 'simi_sent_level1')
simi_sent_level2 = debug_print(
cosine(layer1_DA2.output_D_sent_level_rep,
layer1_DA2.output_QA_sent_level_rep), 'simi_sent_level2')
simi_sent_level3 = debug_print(
cosine(layer1_DA3.output_D_sent_level_rep,
layer1_DA3.output_QA_sent_level_rep), 'simi_sent_level3')
simi_sent_level4 = debug_print(
cosine(layer1_DA4.output_D_sent_level_rep,
layer1_DA4.output_QA_sent_level_rep), 'simi_sent_level4')
simi_doc_level1 = debug_print(
cosine(layer3_DA1.output_D_doc_level_rep,
layer2_A1.output_sent_rep_Dlevel), 'simi_doc_level1')
simi_doc_level2 = debug_print(
cosine(layer3_DA2.output_D_doc_level_rep,
layer2_A2.output_sent_rep_Dlevel), 'simi_doc_level2')
simi_doc_level3 = debug_print(
cosine(layer3_DA3.output_D_doc_level_rep,
layer2_A3.output_sent_rep_Dlevel), 'simi_doc_level3')
simi_doc_level4 = debug_print(
cosine(layer3_DA4.output_D_doc_level_rep,
layer2_A4.output_sent_rep_Dlevel), 'simi_doc_level4')
simi_overall_level1 = debug_print(cosine(overall_D_A1, overall_A1),
'simi_overall_level1')
simi_overall_level2 = debug_print(cosine(overall_D_A2, overall_A2),
'simi_overall_level2')
simi_overall_level3 = debug_print(cosine(overall_D_A3, overall_A3),
'simi_overall_level3')
simi_overall_level4 = debug_print(cosine(overall_D_A4, overall_A4),
'simi_overall_level4')
simi_1 = simi_overall_level1 #+simi_sent_level1+simi_doc_level1
simi_2 = simi_overall_level2 #+simi_sent_level2+simi_doc_level2
simi_3 = simi_overall_level3 #+simi_sent_level3+simi_doc_level3
simi_4 = simi_overall_level4 #+simi_sent_level4+simi_doc_level4
# simi_1=(simi_overall_level1+simi_sent_level1+simi_doc_level1)/3.0
# simi_2=(simi_overall_level2+simi_sent_level2+simi_doc_level2)/3.0
# simi_3=(simi_overall_level3+simi_sent_level3+simi_doc_level3)/3.0
# simi_4=(simi_overall_level4+simi_sent_level4+simi_doc_level4)/3.0
# eucli_1=1.0/(1.0+EUCLID(layer3_DQ.output_D+layer3_DA.output_D, layer3_DQ.output_QA+layer3_DA.output_QA))
# #only use overall_simi
# cost=T.maximum(0.0, margin+T.max([simi_overall_level2, simi_overall_level3, simi_overall_level4])-simi_overall_level1) # ranking loss: max(0, margin-nega+posi)
# posi_simi=simi_overall_level1
# nega_simi=T.max([simi_overall_level2, simi_overall_level3, simi_overall_level4])
#use ensembled simi
# cost=T.maximum(0.0, margin+T.max([simi_2, simi_3, simi_4])-simi_1) # ranking loss: max(0, margin-nega+posi)
# cost=T.maximum(0.0, margin+simi_2-simi_1)+T.maximum(0.0, margin+simi_3-simi_1)+T.maximum(0.0, margin+simi_4-simi_1)
cost12 = T.maximum(
0.0, margin + simi_sent_level2 - simi_sent_level1) + T.maximum(
0.0, margin + simi_doc_level2 - simi_doc_level1) + T.maximum(
0.0, margin + simi_overall_level2 - simi_overall_level1)
cost13 = T.maximum(
0.0, margin + simi_sent_level3 - simi_sent_level1) + T.maximum(
0.0, margin + simi_doc_level3 - simi_doc_level1) + T.maximum(
0.0, margin + simi_overall_level3 - simi_overall_level1)
cost14 = T.maximum(
0.0, margin + simi_sent_level4 - simi_sent_level1) + T.maximum(
0.0, margin + simi_doc_level4 - simi_doc_level1) + T.maximum(
0.0, margin + simi_overall_level4 - simi_overall_level1)
cost = cost12 + cost13 + cost14
posi_simi = T.max([simi_sent_level1, simi_doc_level1, simi_overall_level1])
nega_simi = T.max([
simi_sent_level2, simi_doc_level2, simi_overall_level2,
simi_sent_level3, simi_doc_level3, simi_overall_level3,
simi_sent_level4, simi_doc_level4, simi_overall_level4
])
L2_reg = debug_print(
(high_W**2).sum() + (conv2_W**2).sum() + (conv_W**2).sum(), 'L2_reg'
) #+(embeddings**2).sum(), 'L2_reg')#+(layer1.W** 2).sum()++(embeddings**2).sum()
cost = debug_print(cost + L2_weight * L2_reg, 'cost')
#cost=debug_print((cost_this+cost_tmp)/update_freq, 'cost')
test_model = theano.function(
[index],
[cost, posi_simi, nega_simi],
givens={
index_D: test_data_D[index], #a matrix
# index_Q: test_data_Q[index],
index_A1: test_data_A1[index],
index_A2: test_data_A2[index],
index_A3: test_data_A3[index],
index_A4: test_data_A4[index],
len_D: test_Length_D[index],
len_D_s: test_Length_D_s[index],
# len_Q: test_Length_Q[index],
len_A1: test_Length_A1[index],
len_A2: test_Length_A2[index],
len_A3: test_Length_A3[index],
len_A4: test_Length_A4[index],
left_D: test_leftPad_D[index],
left_D_s: test_leftPad_D_s[index],
# left_Q: test_leftPad_Q[index],
left_A1: test_leftPad_A1[index],
left_A2: test_leftPad_A2[index],
left_A3: test_leftPad_A3[index],
left_A4: test_leftPad_A4[index],
right_D: test_rightPad_D[index],
right_D_s: test_rightPad_D_s[index],
# right_Q: test_rightPad_Q[index],
right_A1: test_rightPad_A1[index],
right_A2: test_rightPad_A2[index],
right_A3: test_rightPad_A3[index],
right_A4: test_rightPad_A4[index]
},
on_unused_input='ignore')
#params = layer3.params + layer2.params + layer1.params+ [conv_W, conv_b]
accumulator = []
for para_i in params:
eps_p = numpy.zeros_like(para_i.get_value(borrow=True),
dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
grad_i = debug_print(grad_i, 'grad_i')
acc = acc_i + T.sqr(grad_i)
updates.append(
(param_i,
param_i - learning_rate * grad_i / T.sqrt(acc))) #AdaGrad
updates.append((acc_i, acc))
# for param_i, grad_i, acc_i in zip(params, grads, accumulator):
# acc = acc_i + T.sqr(grad_i)
# if param_i == embeddings:
# updates.append((param_i, T.set_subtensor((param_i - learning_rate * grad_i / T.sqrt(acc))[0], theano.shared(numpy.zeros(emb_size))))) #AdaGrad
# else:
# updates.append((param_i, param_i - learning_rate * grad_i / T.sqrt(acc))) #AdaGrad
# updates.append((acc_i, acc))
train_model = theano.function(
[index],
[cost, posi_simi, nega_simi],
updates=updates,
givens={
index_D: train_data_D[index],
# index_Q: train_data_Q[index],
index_A1: train_data_A1[index],
index_A2: train_data_A2[index],
index_A3: train_data_A3[index],
index_A4: train_data_A4[index],
len_D: train_Length_D[index],
len_D_s: train_Length_D_s[index],
# len_Q: train_Length_Q[index],
len_A1: train_Length_A1[index],
len_A2: train_Length_A2[index],
len_A3: train_Length_A3[index],
len_A4: train_Length_A4[index],
left_D: train_leftPad_D[index],
left_D_s: train_leftPad_D_s[index],
# left_Q: train_leftPad_Q[index],
left_A1: train_leftPad_A1[index],
left_A2: train_leftPad_A2[index],
left_A3: train_leftPad_A3[index],
left_A4: train_leftPad_A4[index],
right_D: train_rightPad_D[index],
right_D_s: train_rightPad_D_s[index],
# right_Q: train_rightPad_Q[index],
right_A1: train_rightPad_A1[index],
right_A2: train_rightPad_A2[index],
right_A3: train_rightPad_A3[index],
right_A4: train_rightPad_A4[index]
},
on_unused_input='ignore')
train_model_predict = theano.function(
[index],
[cost, posi_simi, nega_simi],
givens={
index_D: train_data_D[index],
# index_Q: train_data_Q[index],
index_A1: train_data_A1[index],
index_A2: train_data_A2[index],
index_A3: train_data_A3[index],
index_A4: train_data_A4[index],
len_D: train_Length_D[index],
len_D_s: train_Length_D_s[index],
# len_Q: train_Length_Q[index],
len_A1: train_Length_A1[index],
len_A2: train_Length_A2[index],
len_A3: train_Length_A3[index],
len_A4: train_Length_A4[index],
left_D: train_leftPad_D[index],
left_D_s: train_leftPad_D_s[index],
# left_Q: train_leftPad_Q[index],
left_A1: train_leftPad_A1[index],
left_A2: train_leftPad_A2[index],
left_A3: train_leftPad_A3[index],
left_A4: train_leftPad_A4[index],
right_D: train_rightPad_D[index],
right_D_s: train_rightPad_D_s[index],
# right_Q: train_rightPad_Q[index],
right_A1: train_rightPad_A1[index],
right_A2: train_rightPad_A2[index],
right_A3: train_rightPad_A3[index],
right_A4: train_rightPad_A4[index]
},
on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
patience_increase = 2 # wait this much longer when a new best is
# found
improvement_threshold = 0.995 # a relative improvement of this much is
# considered significant
validation_frequency = min(n_train_batches, patience / 2)
# go through this many
# minibatche before checking the network
# on the validation set; in this case we
# check every epoch
best_params = None
best_validation_loss = numpy.inf
best_iter = 0
test_score = 0.
start_time = time.clock()
mid_time = start_time
epoch = 0
done_looping = False
max_acc = 0.0
best_epoch = 0
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
#for minibatch_index in xrange(n_train_batches): # each batch
minibatch_index = 0
#shuffle(train_batch_start)#shuffle training data
corr_train = 0
for batch_start in train_batch_start:
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * n_train_batches + minibatch_index + 1
sys.stdout.write("Training :[%6f] %% complete!\r" %
((iter % train_size) * 100.0 / train_size))
sys.stdout.flush()
minibatch_index = minibatch_index + 1
cost_average, posi_simi, nega_simi = train_model(batch_start)
if posi_simi > nega_simi:
corr_train += 1
if iter % n_train_batches == 0:
print 'training @ iter = ' + str(
iter) + ' average cost: ' + str(
cost_average) + 'corr rate:' + str(
corr_train * 100.0 / train_size)
if iter % validation_frequency == 0:
corr_test = 0
for i in test_batch_start:
cost, posi_simi, nega_simi = test_model(i)
if posi_simi > nega_simi:
corr_test += 1
#write_file.close()
#test_score = numpy.mean(test_losses)
test_acc = corr_test * 1.0 / test_size
#test_acc=1-test_score
print(
('\t\t\tepoch %i, minibatch %i/%i, test acc of best '
'model %f %%') %
(epoch, minibatch_index, n_train_batches, test_acc * 100.))
#now, see the results of LR
#write_feature=open(rootPath+'feature_check.txt', 'w')
find_better = False
if test_acc > max_acc:
max_acc = test_acc
best_epoch = epoch
find_better = True
print '\t\t\ttest_acc:', test_acc, 'max:', max_acc, '(at', best_epoch, ')'
if find_better == True:
store_model_to_file(params, best_epoch, max_acc)
print 'Finished storing best params'
if patience <= iter:
done_looping = True
break
print 'Epoch ', epoch, 'uses ', (time.clock() - mid_time) / 60.0, 'min'
mid_time = time.clock()
#writefile.close()
#print 'Batch_size: ', update_freq
end_time = time.clock()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' + os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(learning_rate=0.05, n_epochs=2000, nkerns=[50], batch_size=1, window_width=4,
maxSentLength=64, emb_size=300, hidden_size=200,
margin=0.5, L2_weight=0.0003, update_freq=1, norm_threshold=5.0, max_truncate=40):
maxSentLength=max_truncate+2*(window_width-1)
model_options = locals().copy()
print "model options", model_options
rootPath='/mounts/data/proj/wenpeng/Dataset/WikiQACorpus/';
rng = numpy.random.RandomState(23455)
datasets, vocab_size=load_wikiQA_corpus(rootPath+'vocab.txt', rootPath+'WikiQA-train.txt', rootPath+'test_filtered.txt', max_truncate,maxSentLength)#vocab_size contain train, dev and test
#datasets, vocab_size=load_wikiQA_corpus(rootPath+'vocab_lower_in_word2vec.txt', rootPath+'WikiQA-train.txt', rootPath+'test_filtered.txt', maxSentLength)#vocab_size contain train, dev and test
mtPath='/mounts/data/proj/wenpeng/Dataset/WikiQACorpus/MT/BLEU_NIST/'
mt_train, mt_test=load_mts_wikiQA(mtPath+'result_train/concate_2mt_train.txt', mtPath+'result_test/concate_2mt_test.txt')
wm_train, wm_test=load_wmf_wikiQA(rootPath+'train_word_matching_scores.txt', rootPath+'test_word_matching_scores.txt')
#wm_train, wm_test=load_wmf_wikiQA(rootPath+'train_word_matching_scores_normalized.txt', rootPath+'test_word_matching_scores_normalized.txt')
indices_train, trainY, trainLengths, normalized_train_length, trainLeftPad, trainRightPad= datasets[0]
indices_train_l=indices_train[::2,:]
indices_train_r=indices_train[1::2,:]
trainLengths_l=trainLengths[::2]
trainLengths_r=trainLengths[1::2]
normalized_train_length_l=normalized_train_length[::2]
normalized_train_length_r=normalized_train_length[1::2]
trainLeftPad_l=trainLeftPad[::2]
trainLeftPad_r=trainLeftPad[1::2]
trainRightPad_l=trainRightPad[::2]
trainRightPad_r=trainRightPad[1::2]
indices_test, testY, testLengths,normalized_test_length, testLeftPad, testRightPad= datasets[1]
indices_test_l=indices_test[::2,:]
indices_test_r=indices_test[1::2,:]
testLengths_l=testLengths[::2]
testLengths_r=testLengths[1::2]
normalized_test_length_l=normalized_test_length[::2]
normalized_test_length_r=normalized_test_length[1::2]
testLeftPad_l=testLeftPad[::2]
testLeftPad_r=testLeftPad[1::2]
testRightPad_l=testRightPad[::2]
testRightPad_r=testRightPad[1::2]
n_train_batches=indices_train_l.shape[0]/batch_size
n_test_batches=indices_test_l.shape[0]/batch_size
train_batch_start=list(numpy.arange(n_train_batches)*batch_size)
test_batch_start=list(numpy.arange(n_test_batches)*batch_size)
indices_train_l=theano.shared(numpy.asarray(indices_train_l, dtype=theano.config.floatX), borrow=True)
indices_train_r=theano.shared(numpy.asarray(indices_train_r, dtype=theano.config.floatX), borrow=True)
indices_test_l=theano.shared(numpy.asarray(indices_test_l, dtype=theano.config.floatX), borrow=True)
indices_test_r=theano.shared(numpy.asarray(indices_test_r, dtype=theano.config.floatX), borrow=True)
indices_train_l=T.cast(indices_train_l, 'int64')
indices_train_r=T.cast(indices_train_r, 'int64')
indices_test_l=T.cast(indices_test_l, 'int64')
indices_test_r=T.cast(indices_test_r, 'int64')
rand_values=random_value_normal((vocab_size+1, emb_size), theano.config.floatX, numpy.random.RandomState(1234))
rand_values[0]=numpy.array(numpy.zeros(emb_size),dtype=theano.config.floatX)
#rand_values[0]=numpy.array([1e-50]*emb_size)
rand_values=load_word2vec_to_init(rand_values, rootPath+'vocab_embs_300d.txt')
#rand_values=load_word2vec_to_init(rand_values, rootPath+'vocab_lower_in_word2vec_embs_300d.txt')
embeddings=theano.shared(value=rand_values, borrow=True)
#cost_tmp=0
error_sum=0
# allocate symbolic variables for the data
index = T.lscalar()
x_index_l = T.lmatrix('x_index_l') # now, x is the index matrix, must be integer
x_index_r = T.lmatrix('x_index_r')
y = T.lvector('y')
left_l=T.lscalar()
right_l=T.lscalar()
left_r=T.lscalar()
right_r=T.lscalar()
length_l=T.lscalar()
length_r=T.lscalar()
norm_length_l=T.dscalar()
norm_length_r=T.dscalar()
mts=T.dmatrix()
wmf=T.dmatrix()
cost_tmp=T.dscalar()
#x=embeddings[x_index.flatten()].reshape(((batch_size*4),maxSentLength, emb_size)).transpose(0, 2, 1).flatten()
ishape = (emb_size, maxSentLength) # this is the size of MNIST images
filter_size=(emb_size,window_width)
#poolsize1=(1, ishape[1]-filter_size[1]+1) #?????????????????????????????
length_after_wideConv=ishape[1]+filter_size[1]-1
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
# Reshape matrix of rasterized images of shape (batch_size,28*28)
# to a 4D tensor, compatible with our LeNetConvPoolLayer
#layer0_input = x.reshape(((batch_size*4), 1, ishape[0], ishape[1]))
layer0_l_input = embeddings[x_index_l.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_r_input = embeddings[x_index_r.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
conv_W, conv_b=create_conv_para(rng, filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]))
#layer0_output = debug_print(layer0.output, 'layer0.output')
layer0_l = Conv_with_input_para(rng, input=layer0_l_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]), W=conv_W, b=conv_b)
layer0_r = Conv_with_input_para(rng, input=layer0_r_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_size[0], filter_size[1]), W=conv_W, b=conv_b)
layer0_l_output=debug_print(layer0_l.output, 'layer0_l.output')
layer0_r_output=debug_print(layer0_r.output, 'layer0_r.output')
layer1=Average_Pooling_for_Top(rng, input_l=layer0_l_output, input_r=layer0_r_output, kern=nkerns[0],
left_l=left_l, right_l=right_l, left_r=left_r, right_r=right_r,
length_l=length_l+filter_size[1]-1, length_r=length_r+filter_size[1]-1,
dim=maxSentLength+filter_size[1]-1)
#layer2=HiddenLayer(rng, input=layer1_out, n_in=nkerns[0]*2, n_out=hidden_size, activation=T.tanh)
sum_uni_l=T.sum(layer0_l_input, axis=3).reshape((1, emb_size))
aver_uni_l=sum_uni_l/layer0_l_input.shape[3]
norm_uni_l=sum_uni_l/T.sqrt((sum_uni_l**2).sum())
sum_uni_r=T.sum(layer0_r_input, axis=3).reshape((1, emb_size))
aver_uni_r=sum_uni_r/layer0_r_input.shape[3]
norm_uni_r=sum_uni_r/T.sqrt((sum_uni_r**2).sum())
uni_cosine=cosine(sum_uni_l, sum_uni_r)
aver_uni_cosine=cosine(aver_uni_l, aver_uni_r)
uni_sigmoid_simi=debug_print(T.nnet.sigmoid(T.dot(norm_uni_l, norm_uni_r.T)).reshape((1,1)),'uni_sigmoid_simi')
'''
linear=Linear(sum_uni_l, sum_uni_r)
poly=Poly(sum_uni_l, sum_uni_r)
sigmoid=Sigmoid(sum_uni_l, sum_uni_r)
rbf=RBF(sum_uni_l, sum_uni_r)
gesd=GESD(sum_uni_l, sum_uni_r)
'''
eucli_1=1.0/(1.0+EUCLID(sum_uni_l, sum_uni_r))#25.2%
#eucli_1_exp=1.0/T.exp(EUCLID(sum_uni_l, sum_uni_r))
len_l=norm_length_l.reshape((1,1))
len_r=norm_length_r.reshape((1,1))
'''
len_l=length_l.reshape((1,1))
len_r=length_r.reshape((1,1))
'''
#length_gap=T.log(1+(T.sqrt((len_l-len_r)**2))).reshape((1,1))
#length_gap=T.sqrt((len_l-len_r)**2)
#layer3_input=mts
layer3_input=T.concatenate([#mts,
uni_cosine,#eucli_1_exp,#uni_sigmoid_simi, #norm_uni_l-(norm_uni_l+norm_uni_r)/2,#uni_cosine, #
layer1.output_cosine, #layer1.output_eucli_to_simi_exp,#layer1.output_sigmoid_simi,#layer1.output_vector_l-(layer1.output_vector_l+layer1.output_vector_r)/2,#layer1.output_cosine, #
len_l, len_r,wmf
], axis=1)#, layer2.output, layer1.output_cosine], axis=1)
#layer3_input=T.concatenate([mts,eucli, uni_cosine, len_l, len_r, norm_uni_l-(norm_uni_l+norm_uni_r)/2], axis=1)
#layer3=LogisticRegression(rng, input=layer3_input, n_in=11, n_out=2)
layer3=LogisticRegression(rng, input=layer3_input, n_in=(1)+(1)+2+2, n_out=2)
#L2_reg =(layer3.W** 2).sum()+(layer2.W** 2).sum()+(layer1.W** 2).sum()+(conv_W** 2).sum()
L2_reg =debug_print((layer3.W** 2).sum()+(conv_W** 2).sum(), 'L2_reg')#+(layer1.W** 2).sum()++(embeddings**2).sum()
cost_this =debug_print(layer3.negative_log_likelihood(y), 'cost_this')#+L2_weight*L2_reg
cost=debug_print((cost_this+cost_tmp)/update_freq+L2_weight*L2_reg, 'cost')
#cost=debug_print((cost_this+cost_tmp)/update_freq, 'cost')
test_model = theano.function([index], [layer3.prop_for_posi,layer3_input, y],
givens={
x_index_l: indices_test_l[index: index + batch_size],
x_index_r: indices_test_r[index: index + batch_size],
y: testY[index: index + batch_size],
left_l: testLeftPad_l[index],
right_l: testRightPad_l[index],
left_r: testLeftPad_r[index],
right_r: testRightPad_r[index],
length_l: testLengths_l[index],
length_r: testLengths_r[index],
norm_length_l: normalized_test_length_l[index],
norm_length_r: normalized_test_length_r[index],
mts: mt_test[index: index + batch_size],
wmf: wm_test[index: index + batch_size]}, on_unused_input='ignore')
#params = layer3.params + layer2.params + layer1.params+ [conv_W, conv_b]
params = layer3.params+ [conv_W, conv_b]#+[embeddings]# + layer1.params
params_conv = [conv_W, conv_b]
accumulator=[]
for para_i in params:
eps_p=numpy.zeros_like(para_i.get_value(borrow=True),dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
grad_i=debug_print(grad_i,'grad_i')
acc = acc_i + T.sqr(grad_i)
updates.append((param_i, param_i - learning_rate * grad_i / T.sqrt(acc))) #AdaGrad
updates.append((acc_i, acc))
train_model = theano.function([index,cost_tmp], cost, updates=updates,
givens={
x_index_l: indices_train_l[index: index + batch_size],
x_index_r: indices_train_r[index: index + batch_size],
y: trainY[index: index + batch_size],
left_l: trainLeftPad_l[index],
right_l: trainRightPad_l[index],
left_r: trainLeftPad_r[index],
right_r: trainRightPad_r[index],
length_l: trainLengths_l[index],
length_r: trainLengths_r[index],
norm_length_l: normalized_train_length_l[index],
norm_length_r: normalized_train_length_r[index],
mts: mt_train[index: index + batch_size],
wmf: wm_train[index: index + batch_size]}, on_unused_input='ignore')
train_model_predict = theano.function([index], [cost_this,layer3.errors(y), layer3_input, y],
givens={
x_index_l: indices_train_l[index: index + batch_size],
x_index_r: indices_train_r[index: index + batch_size],
y: trainY[index: index + batch_size],
left_l: trainLeftPad_l[index],
right_l: trainRightPad_l[index],
left_r: trainLeftPad_r[index],
right_r: trainRightPad_r[index],
length_l: trainLengths_l[index],
length_r: trainLengths_r[index],
norm_length_l: normalized_train_length_l[index],
norm_length_r: normalized_train_length_r[index],
mts: mt_train[index: index + batch_size],
wmf: wm_train[index: index + batch_size]}, on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
patience_increase = 2 # wait this much longer when a new best is
# found
improvement_threshold = 0.995 # a relative improvement of this much is
# considered significant
validation_frequency = min(n_train_batches, patience / 2)
# go through this many
# minibatche before checking the network
# on the validation set; in this case we
# check every epoch
best_params = None
best_validation_loss = numpy.inf
best_iter = 0
test_score = 0.
start_time = time.clock()
epoch = 0
done_looping = False
svm_max=0.0
best_epoch=0
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
#for minibatch_index in xrange(n_train_batches): # each batch
minibatch_index=0
#shuffle(train_batch_start)#shuffle training data
cost_tmp=0.0
for batch_start in train_batch_start:
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * n_train_batches + minibatch_index +1
minibatch_index=minibatch_index+1
#if epoch %2 ==0:
# batch_start=batch_start+remain_train
#time.sleep(0.5)
#print batch_start
if iter%update_freq != 0:
cost_ij, error_ij, layer3_input, y=train_model_predict(batch_start)
#print 'layer3_input', layer3_input
cost_tmp+=cost_ij
error_sum+=error_ij
#print 'cost_acc ',cost_acc
#print 'cost_ij ', cost_ij
#print 'cost_tmp before update',cost_tmp
else:
cost_average= train_model(batch_start,cost_tmp)
#print 'layer3_input', layer3_input
error_sum=0
cost_tmp=0.0#reset for the next batch
#print 'cost_average ', cost_average
#print 'cost_this ',cost_this
#exit(0)
#exit(0)
if iter % n_train_batches == 0:
print 'training @ iter = '+str(iter)+' average cost: '+str(cost_average)+' error: '+str(error_sum)+'/'+str(update_freq)+' error rate: '+str(error_sum*1.0/update_freq)
#if iter ==1:
# exit(0)
if iter % validation_frequency == 0:
#write_file=open('log.txt', 'w')
test_probs=[]
test_y=[]
test_features=[]
for i in test_batch_start:
prob_i, layer3_input, y=test_model(i)
#test_losses = [test_model(i) for i in test_batch_start]
test_probs.append(prob_i[0][0])
test_y.append(y[0])
test_features.append(layer3_input[0])
MAP, MRR=compute_map_mrr(rootPath+'test_filtered.txt', test_probs)
#now, check MAP and MRR
print(('\t\t\t\t\t\tepoch %i, minibatch %i/%i, test MAP of best '
'model %f, MRR %f') %
(epoch, minibatch_index, n_train_batches,MAP, MRR))
#now, see the results of LR
#write_feature=open(rootPath+'feature_check.txt', 'w')
train_y=[]
train_features=[]
count=0
for batch_start in train_batch_start:
cost_ij, error_ij, layer3_input, y=train_model_predict(batch_start)
train_y.append(y[0])
train_features.append(layer3_input[0])
#write_feature.write(str(batch_start)+' '+' '.join(map(str,layer3_input[0]))+'\n')
#count+=1
#write_feature.close()
clf = svm.SVC(C=1.0, kernel='linear')
clf.fit(train_features, train_y)
results_svm=clf.decision_function(test_features)
MAP_svm, MRR_svm=compute_map_mrr(rootPath+'test_filtered.txt', results_svm)
lr=LinearRegression().fit(train_features, train_y)
results_lr=lr.predict(test_features)
MAP_lr, MRR_lr=compute_map_mrr(rootPath+'test_filtered.txt', results_lr)
print '\t\t\t\t\t\t\tSVM, MAP: ', MAP_svm, ' MRR: ', MRR_svm, ' LR: ', MAP_lr, ' MRR: ', MRR_lr
if patience <= iter:
done_looping = True
break
#after each epoch, increase the batch_size
if epoch%2==1:
update_freq=update_freq*1
else:
update_freq=update_freq/1
#store the paras after epoch 15
if epoch ==15:
store_model_to_file(params_conv)
print 'Finished storing best conv params'
exit(0)
#print 'Batch_size: ', update_freq
end_time = time.clock()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' +
os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(file_name,
vocab_file,
train_file,
dev_file,
word2vec_file,
learning_rate=0.001,
n_epochs=2000,
nkerns=[90, 90],
batch_size=1,
window_width=2,
maxSentLength=64,
maxDocLength=60,
emb_size=50,
hidden_size=200,
L2_weight=0.0065,
update_freq=1,
norm_threshold=5.0,
max_s_length=128,
max_d_length=128,
margin=0.3):
maxSentLength = max_s_length + 2 * (window_width - 1)
maxDocLength = max_d_length + 2 * (window_width - 1)
model_options = locals().copy()
f = open(file_name, 'w')
f.write("model options " + str(model_options) + '\n')
rng = numpy.random.RandomState(23455)
train_data, _train_Label, train_size, test_data, _test_Label, test_size, vocab_size = load_MCTest_corpus_DPN(
vocab_file, train_file, dev_file, max_s_length, maxSentLength,
maxDocLength) #vocab_size contain train, dev and test
f.write('train_size : ' + str(train_size))
[
train_data_D, train_data_A1, train_Label, train_Length_D,
train_Length_D_s, train_Length_A1, train_leftPad_D, train_leftPad_D_s,
train_leftPad_A1, train_rightPad_D, train_rightPad_D_s,
train_rightPad_A1
] = train_data
[
test_data_D, test_data_A1, test_Label, test_Length_D, test_Length_D_s,
test_Length_A1, test_leftPad_D, test_leftPad_D_s, test_leftPad_A1,
test_rightPad_D, test_rightPad_D_s, test_rightPad_A1
] = test_data
n_train_batches = train_size / batch_size
n_test_batches = test_size / batch_size
train_batch_start = list(numpy.arange(n_train_batches) * batch_size)
test_batch_start = list(numpy.arange(n_test_batches) * batch_size)
rand_values = random_value_normal((vocab_size + 1, emb_size),
theano.config.floatX,
numpy.random.RandomState(1234))
rand_values[0] = numpy.array(numpy.zeros(emb_size),
dtype=theano.config.floatX)
rand_values = load_word2vec_to_init(rand_values, word2vec_file)
embeddings = theano.shared(value=rand_values, borrow=True)
error_sum = 0
# allocate symbolic variables for the data
index = T.lscalar()
index_D = T.lmatrix() # now, x is the index matrix, must be integer
index_A1 = T.lvector()
y = T.lscalar()
len_D = T.lscalar()
len_D_s = T.lvector()
len_A1 = T.lscalar()
left_D = T.lscalar()
left_D_s = T.lvector()
left_A1 = T.lscalar()
right_D = T.lscalar()
right_D_s = T.lvector()
right_A1 = T.lscalar()
ishape = (emb_size, maxSentLength) # sentence shape
dshape = (nkerns[0], maxDocLength) # doc shape
filter_words = (emb_size, window_width)
filter_sents = (nkerns[0], window_width)
######################
# BUILD ACTUAL MODEL #
######################
f.write('... building the model\n')
layer0_D_input = embeddings[index_D.flatten()].reshape(
(maxDocLength, maxSentLength,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_A1_input = embeddings[index_A1.flatten()].reshape(
(batch_size, maxSentLength,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
conv_W, conv_b = create_conv_para(rng,
filter_shape=(nkerns[0], 1,
filter_words[0],
filter_words[1]))
layer0_para = [conv_W, conv_b]
conv2_W, conv2_b = create_conv_para(rng,
filter_shape=(nkerns[1], 1, nkerns[0],
filter_sents[1]))
layer2_para = [conv2_W, conv2_b]
high_W, high_b = create_highw_para(
rng, nkerns[0], nkerns[1]
) # this part decides nkern[0] and nkern[1] must be in the same dimension
highW_para = [high_W, high_b]
params = layer2_para + layer0_para + highW_para #+[embeddings]
layer0_D = Conv_with_input_para(
rng,
input=layer0_D_input,
image_shape=(maxDocLength, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]),
W=conv_W,
b=conv_b)
layer0_A1 = Conv_with_input_para(
rng,
input=layer0_A1_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]),
W=conv_W,
b=conv_b)
layer0_D_output = debug_print(layer0_D.output, 'layer0_D.output')
layer0_A1_output = debug_print(layer0_A1.output, 'layer0_A1.output')
layer1_DA1 = Average_Pooling_Scan(rng,
input_D=layer0_D_output,
input_r=layer0_A1_output,
kern=nkerns[0],
left_D=left_D,
right_D=right_D,
left_D_s=left_D_s,
right_D_s=right_D_s,
left_r=left_A1,
right_r=right_A1,
length_D_s=len_D_s + filter_words[1] - 1,
length_r=len_A1 + filter_words[1] - 1,
dim=maxSentLength + filter_words[1] - 1,
doc_len=maxDocLength,
topk=3)
layer2_DA1 = Conv_with_input_para(
rng,
input=layer1_DA1.output_D.reshape(
(batch_size, 1, nkerns[0], dshape[1])),
image_shape=(batch_size, 1, nkerns[0], dshape[1]),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]),
W=conv2_W,
b=conv2_b)
layer2_A1 = Conv_with_input_para_one_col_featuremap(
rng,
input=layer1_DA1.output_QA_sent_level_rep.reshape(
(batch_size, 1, nkerns[0], 1)),
image_shape=(batch_size, 1, nkerns[0], 1),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]),
W=conv2_W,
b=conv2_b)
layer2_A1_output_sent_rep_Dlevel = debug_print(
layer2_A1.output_sent_rep_Dlevel, 'layer2_A1.output_sent_rep_Dlevel')
layer3_DA1 = Average_Pooling_for_Top(
rng,
input_l=layer2_DA1.output,
input_r=layer2_A1_output_sent_rep_Dlevel,
kern=nkerns[1],
left_l=left_D,
right_l=right_D,
left_r=0,
right_r=0,
length_l=len_D + filter_sents[1] - 1,
length_r=1,
dim=maxDocLength + filter_sents[1] - 1,
topk=3)
#high-way
transform_gate_DA1 = debug_print(
T.nnet.sigmoid(
T.dot(high_W, layer1_DA1.output_D_sent_level_rep) + high_b),
'transform_gate_DA1')
transform_gate_A1 = debug_print(
T.nnet.sigmoid(
T.dot(high_W, layer1_DA1.output_QA_sent_level_rep) + high_b),
'transform_gate_A1')
overall_D_A1 = (
1.0 - transform_gate_DA1
) * layer1_DA1.output_D_sent_level_rep + transform_gate_DA1 * layer3_DA1.output_D_doc_level_rep
overall_A1 = (
1.0 - transform_gate_A1
) * layer1_DA1.output_QA_sent_level_rep + transform_gate_A1 * layer2_A1.output_sent_rep_Dlevel
simi_sent_level1 = debug_print(
cosine(layer1_DA1.output_D_sent_level_rep,
layer1_DA1.output_QA_sent_level_rep), 'simi_sent_level1')
simi_doc_level1 = debug_print(
cosine(layer3_DA1.output_D_doc_level_rep,
layer2_A1.output_sent_rep_Dlevel), 'simi_doc_level1')
simi_overall_level1 = debug_print(cosine(overall_D_A1, overall_A1),
'simi_overall_level1')
simi_1 = (simi_overall_level1 + simi_sent_level1 + simi_doc_level1) / 3.0
logistic_w, logistic_b = create_logistic_para(rng, 1, 2)
logistic_para = [logistic_w, logistic_b]
params += logistic_para
simi_1 = T.dot(logistic_w, simi_1) + logistic_b.dimshuffle(0, 'x')
simi_1 = simi_1.dimshuffle(1, 0)
simi_1 = T.nnet.softmax(simi_1)
predict = T.argmax(simi_1, axis=1)
tmp = T.log(simi_1)
cost = T.maximum(0.0, margin + tmp[0][1 - y] - tmp[0][y])
L2_reg = (high_W**2).sum() + (conv2_W**2).sum() + (conv_W**2).sum() + (
logistic_w**2).sum()
cost = cost + L2_weight * L2_reg
test_model = theano.function(
[index],
[cost, simi_1, predict],
givens={
index_D: test_data_D[index], #a matrix
index_A1: test_data_A1[index],
y: test_Label[index],
len_D: test_Length_D[index],
len_D_s: test_Length_D_s[index],
len_A1: test_Length_A1[index],
left_D: test_leftPad_D[index],
left_D_s: test_leftPad_D_s[index],
left_A1: test_leftPad_A1[index],
right_D: test_rightPad_D[index],
right_D_s: test_rightPad_D_s[index],
right_A1: test_rightPad_A1[index],
},
on_unused_input='ignore')
accumulator = []
for para_i in params:
eps_p = numpy.zeros_like(para_i.get_value(borrow=True),
dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
grad_i = debug_print(grad_i, 'grad_i')
acc = acc_i + T.sqr(grad_i)
updates.append(
(param_i,
param_i - learning_rate * grad_i / T.sqrt(acc))) #AdaGrad
updates.append((acc_i, acc))
train_model = theano.function(
[index], [cost, simi_1, predict],
updates=updates,
givens={
index_D: train_data_D[index],
index_A1: train_data_A1[index],
y: train_Label[index],
len_D: train_Length_D[index],
len_D_s: train_Length_D_s[index],
len_A1: train_Length_A1[index],
left_D: train_leftPad_D[index],
left_D_s: train_leftPad_D_s[index],
left_A1: train_leftPad_A1[index],
right_D: train_rightPad_D[index],
right_D_s: train_rightPad_D_s[index],
right_A1: train_rightPad_A1[index],
},
on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
f.write('... training\n')
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
patience_increase = 2 # wait this much longer when a new best is
# found
improvement_threshold = 0.995 # a relative improvement of this much is
# considered significant
validation_frequency = min(n_train_batches, patience / 2)
# go through this many
# minibatche before checking the network
# on the validation set; in this case we
# check every epoch
best_params = None
best_validation_loss = numpy.inf
best_iter = 0
test_score = 0.
start_time = time.clock()
mid_time = start_time
epoch = 0
done_looping = False
max_acc = 0.0
best_epoch = 0
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
#for minibatch_index in xrange(n_train_batches): # each batch
minibatch_index = 0
#shuffle(train_batch_start)#shuffle training data
simi_train = []
predict_train = []
for batch_start in train_batch_start:
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * n_train_batches + minibatch_index + 1
minibatch_index = minibatch_index + 1
cost_average, simi, predict = train_model(batch_start)
simi_train.append(simi)
predict_train.append(predict)
if iter % 1000 == 0:
f.write('@iter :' + str(iter) + '\n')
if iter % n_train_batches == 0:
corr_train = compute_corr_train(predict_train, _train_Label)
res = 'training @ iter = ' + str(
iter) + ' average cost: ' + str(
cost_average) + 'corr rate: ' + str(
corr_train * 100.0 / train_size) + '\n'
f.write(res)
if iter % validation_frequency == 0 or iter % 20000 == 0:
posi_test_sent = []
nega_test_sent = []
posi_test_doc = []
nega_test_doc = []
posi_test_overall = []
nega_test_overall = []
simi_test = []
predict_test = []
for i in test_batch_start:
cost, simi, predict = test_model(i)
#print simi
#f.write('test_predict : ' + str(predict) + ' test_simi : ' + str(simi) + '\n' )
simi_test.append(simi)
predict_test.append(predict)
corr_test = compute_corr(simi_test, predict_test, f)
test_acc = corr_test * 1.0 / (test_size / 4.0)
res = '\t\t\tepoch ' + str(epoch) + ', minibatch ' + str(
minibatch_index) + ' / ' + str(
n_train_batches) + ' test acc of best model ' + str(
test_acc * 100.0) + '\n'
f.write(res)
find_better = False
if test_acc > max_acc:
max_acc = test_acc
best_epoch = epoch
find_better = True
res = '\t\t\tmax: ' + str(max_acc) + ' (at ' + str(
best_epoch) + ')\n'
f.write(res)
if find_better == True:
store_model_to_file(params, best_epoch, max_acc)
print 'Finished storing best params'
if patience <= iter:
done_looping = True
break
print 'Epoch ', epoch, 'uses ', (time.clock() - mid_time) / 60.0, 'min'
mid_time = time.clock()
#writefile.close()
#print 'Batch_size: ', update_freq
end_time = time.clock()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' + os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(learning_rate=0.02,
n_epochs=4,
L2_weight=0.0000001,
extra_size=4,
emb_size=300,
batch_size=50,
filter_size=[3, 5],
maxSentLen=60,
hidden_size=[300, 300]):
model_options = locals().copy()
print "model options", model_options
seed = 1234
np.random.seed(seed)
rng = np.random.RandomState(
seed) #random seed, control the model generates the same results
all_sentences_l, all_masks_l, all_sentences_r, all_masks_r, all_labels, word2id = load_SNLI_dataset(
maxlen=maxSentLen
) #minlen, include one label, at least one word in the sentence
test_sents_l, test_masks_l, test_sents_r, test_masks_r, test_labels, word2id = load_NYT_dataset(
maxSentLen, word2id)
train_sents_l = np.asarray(all_sentences_l[0], dtype='int32')
dev_sents_l = np.asarray(all_sentences_l[1], dtype='int32')
test_sents_l = np.asarray(test_sents_l, dtype='int32')
train_masks_l = np.asarray(all_masks_l[0], dtype=theano.config.floatX)
dev_masks_l = np.asarray(all_masks_l[1], dtype=theano.config.floatX)
test_masks_l = np.asarray(test_masks_l, dtype=theano.config.floatX)
train_sents_r = np.asarray(all_sentences_r[0], dtype='int32')
dev_sents_r = np.asarray(all_sentences_r[1], dtype='int32')
test_sents_r = np.asarray(test_sents_r, dtype='int32')
train_masks_r = np.asarray(all_masks_r[0], dtype=theano.config.floatX)
dev_masks_r = np.asarray(all_masks_r[1], dtype=theano.config.floatX)
test_masks_r = np.asarray(test_masks_r, dtype=theano.config.floatX)
train_labels_store = np.asarray(all_labels[0], dtype='int32')
dev_labels_store = np.asarray(all_labels[1], dtype='int32')
test_labels_store = np.asarray(test_labels, dtype='int32')
train_size = len(train_labels_store)
dev_size = len(dev_labels_store)
test_size = len(test_labels_store)
print 'train size: ', train_size, ' dev size: ', dev_size, ' test size: ', test_size
vocab_size = len(word2id) + 1
rand_values = rng.normal(
0.0, 0.01,
(vocab_size, emb_size)) #generate a matrix by Gaussian distribution
#here, we leave code for loading word2vec to initialize words
rand_values[0] = np.array(np.zeros(emb_size), dtype=theano.config.floatX)
id2word = {y: x for x, y in word2id.iteritems()}
word2vec = load_word2vec()
rand_values = load_word2vec_to_init(rand_values, id2word, word2vec)
init_embeddings = theano.shared(
value=np.array(rand_values, dtype=theano.config.floatX), borrow=True
) #wrap up the python variable "rand_values" into theano variable
#now, start to build the input form of the model
sents_ids_l = T.imatrix()
sents_mask_l = T.fmatrix()
sents_ids_r = T.imatrix()
sents_mask_r = T.fmatrix()
labels = T.ivector()
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
def embed_input(emb_matrix, sent_ids):
return emb_matrix[sent_ids.flatten()].reshape(
(batch_size, maxSentLen, emb_size)).dimshuffle(0, 2, 1)
embed_input_l = embed_input(
init_embeddings, sents_ids_l
) #embeddings[sents_ids_l.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1) #the input format can be adapted into CNN or GRU or LSTM
embed_input_r = embed_input(
init_embeddings, sents_ids_r
) #embeddings[sents_ids_r.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1)
'''create_AttentiveConv_params '''
conv_W, conv_b = create_conv_para(rng,
filter_shape=(hidden_size[1], 1,
hidden_size[0],
filter_size[0]))
conv_W_context, conv_b_context = create_conv_para(
rng, filter_shape=(hidden_size[1], 1, hidden_size[0], 1))
conv_W_2, conv_b_2 = create_conv_para(rng,
filter_shape=(hidden_size[1], 1,
hidden_size[0],
filter_size[1]))
conv_W_context_2, conv_b_context_2 = create_conv_para(
rng, filter_shape=(hidden_size[1], 1, hidden_size[0], 1))
NN_para = [
conv_W, conv_b, conv_W_context, conv_W_2, conv_b_2, conv_W_context_2
]
'''
attentive convolution function
'''
attentive_conv_layer = Conv_for_Pair(
rng,
origin_input_tensor3=embed_input_l,
origin_input_tensor3_r=embed_input_r,
input_tensor3=embed_input_l,
input_tensor3_r=embed_input_r,
mask_matrix=sents_mask_l,
mask_matrix_r=sents_mask_r,
image_shape=(batch_size, 1, hidden_size[0], maxSentLen),
image_shape_r=(batch_size, 1, hidden_size[0], maxSentLen),
filter_shape=(hidden_size[1], 1, hidden_size[0], filter_size[0]),
filter_shape_context=(hidden_size[1], 1, hidden_size[0], 1),
W=conv_W,
b=conv_b,
W_context=conv_W_context,
b_context=conv_b_context)
attentive_sent_embeddings_l = attentive_conv_layer.attentive_maxpool_vec_l
attentive_sent_embeddings_r = attentive_conv_layer.attentive_maxpool_vec_r
attentive_conv_layer_2 = Conv_for_Pair(
rng,
origin_input_tensor3=embed_input_l,
origin_input_tensor3_r=embed_input_r,
input_tensor3=embed_input_l,
input_tensor3_r=embed_input_r,
mask_matrix=sents_mask_l,
mask_matrix_r=sents_mask_r,
image_shape=(batch_size, 1, hidden_size[0], maxSentLen),
image_shape_r=(batch_size, 1, hidden_size[0], maxSentLen),
filter_shape=(hidden_size[1], 1, hidden_size[0], filter_size[1]),
filter_shape_context=(hidden_size[1], 1, hidden_size[0], 1),
W=conv_W_2,
b=conv_b_2,
W_context=conv_W_context_2,
b_context=conv_b_context_2)
attentive_sent_embeddings_l_2 = attentive_conv_layer_2.attentive_maxpool_vec_l
attentive_sent_embeddings_r_2 = attentive_conv_layer_2.attentive_maxpool_vec_r
#form input to HL layers
HL_layer_1_input = T.concatenate([
attentive_sent_embeddings_l, attentive_sent_embeddings_r,
attentive_sent_embeddings_l * attentive_sent_embeddings_r,
attentive_sent_embeddings_l_2, attentive_sent_embeddings_r_2,
attentive_sent_embeddings_l_2 * attentive_sent_embeddings_r_2
],
axis=1)
HL_layer_1_input_size = 6 * hidden_size[1]
HL_layer_1 = HiddenLayer(rng,
input=HL_layer_1_input,
n_in=HL_layer_1_input_size,
n_out=hidden_size[1],
activation=T.nnet.relu)
HL_layer_2 = HiddenLayer(rng,
input=HL_layer_1.output,
n_in=hidden_size[1],
n_out=hidden_size[1],
activation=T.nnet.relu)
# LR_input_size=HL_layer_1_input_size+2*hidden_size[0]
"form input to LR classifier"
LR_input = T.tanh(
T.concatenate([HL_layer_1_input, HL_layer_1.output, HL_layer_2.output],
axis=1))
LR_input_size = HL_layer_1_input_size + 2 * hidden_size[1]
U_a = create_ensemble_para(
rng, 3, LR_input_size) # the weight matrix hidden_size*2
LR_b = theano.shared(value=np.zeros((3, ), dtype=theano.config.floatX),
name='LR_b',
borrow=True) #bias for each target class
LR_para = [U_a, LR_b]
layer_LR = LogisticRegression(
rng, input=LR_input, n_in=LR_input_size, n_out=3, W=U_a, b=LR_b
) #basically it is a multiplication between weight matrix and input feature vector
loss = layer_LR.negative_log_likelihood(
labels
) #for classification task, we usually used negative log likelihood as loss, the lower the better.
'''
testing
'''
test_preds = T.argmax(layer_LR.p_y_given_x, axis=1)
transfered_preds = T.eq(test_preds, 2)
test_error = T.mean(T.neq(transfered_preds, labels))
params = [init_embeddings
] + NN_para + HL_layer_1.params + HL_layer_2.params + LR_para
cost = loss
updates = Gradient_Cost_Para(cost, params, learning_rate)
train_model = theano.function(
[sents_ids_l, sents_mask_l, sents_ids_r, sents_mask_r, labels],
cost,
updates=updates,
allow_input_downcast=True,
on_unused_input='ignore')
test_model = theano.function(
[sents_ids_l, sents_mask_l, sents_ids_r, sents_mask_r, labels],
[test_error, transfered_preds],
allow_input_downcast=True,
on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 50000000000 # look as this many examples regardless
start_time = time.time()
mid_time = start_time
past_time = mid_time
epoch = 0
done_looping = False
n_train_batches = train_size / batch_size
train_batch_start = list(
np.arange(n_train_batches) * batch_size) + [train_size - batch_size]
n_dev_batches = dev_size / batch_size
dev_batch_start = list(
np.arange(n_dev_batches) * batch_size) + [dev_size - batch_size]
n_test_batches = test_size / batch_size
test_batch_start = list(
np.arange(n_test_batches) * batch_size) + [test_size - batch_size]
max_acc_dev = 0.0
max_acc_test = 0.0
max_f1 = 0.0
cost_i = 0.0
train_indices = range(train_size)
while epoch < n_epochs:
epoch = epoch + 1
random.Random(100).shuffle(
train_indices
) #shuffle training set for each new epoch, is supposed to promote performance, but not garrenteed
iter_accu = 0
for batch_id in train_batch_start: #for each batch
# iter means how many batches have been run, taking into loop
iter = (epoch - 1) * n_train_batches + iter_accu + 1
iter_accu += 1
train_id_batch = train_indices[batch_id:batch_id + batch_size]
cost_i += train_model(train_sents_l[train_id_batch],
train_masks_l[train_id_batch],
train_sents_r[train_id_batch],
train_masks_r[train_id_batch],
train_labels_store[train_id_batch])
#after each 1000 batches, we test the performance of the model on all test data
if iter % 100 == 0:
print 'Epoch ', epoch, 'iter ' + str(
iter) + ' average cost: ' + str(cost_i / iter), 'uses ', (
time.time() - past_time) / 60.0, 'min'
past_time = time.time()
pred_labels = []
gold_labels = []
error_sum = 0.0
for idd, test_batch_id in enumerate(
test_batch_start): # for each test batch
error_i, pred_labels_i = test_model(
test_sents_l[test_batch_id:test_batch_id + batch_size],
test_masks_l[test_batch_id:test_batch_id + batch_size],
test_sents_r[test_batch_id:test_batch_id + batch_size],
test_masks_r[test_batch_id:test_batch_id + batch_size],
test_labels_store[test_batch_id:test_batch_id +
batch_size])
error_sum += error_i
pred_labels += list(pred_labels_i)
gold_labels += list(
test_labels_store[test_batch_id:test_batch_id +
batch_size])
test_acc = 1.0 - error_sum / (len(test_batch_start))
test_f1 = f1_score_2_binary_list(
gold_labels, pred_labels) #, average='binary')
if test_acc > max_acc_test:
max_acc_test = test_acc
if test_f1 > max_f1:
max_f1 = test_f1
# store_model_to_file('/mounts/data/proj/wenpeng/Dataset/StanfordEntailment/model_para_five_copies_'+str(max_acc_test), params)
print '\t\tcurrent acc:', test_acc, ' ; ', '\t\tmax_acc:', max_acc_test, '\t\t test_f1:', test_f1, '\t\tmax F1:', max_f1
print 'Epoch ', epoch, 'uses ', (time.time() - mid_time) / 60.0, 'min'
mid_time = time.time()
#print 'Batch_size: ', update_freq
end_time = time.time()
print >> sys.stderr, ('The code for file ' + os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
return max_acc_test
def evaluate_lenet5(learning_rate=0.01,
n_epochs=4,
emb_size=300,
batch_size=50,
describ_max_len=20,
type_size=12,
filter_size=[3, 5],
maxSentLen=200,
hidden_size=[300, 300]):
model_options = locals().copy()
print "model options", model_options
emb_root = '/save/wenpeng/datasets/LORELEI/multi-lingual-emb/2018-il9-il10/multi-emb/'
test_file_path = '/save/wenpeng/datasets/LORELEI/il9/il9-setE-as-test-input_ner_filtered_w2.txt'
output_file_path = '/save/wenpeng/datasets/LORELEI/il9/il9_system_output_concMT_BBN_NI_epoch4.json'
seed = 1234
np.random.seed(seed)
rng = np.random.RandomState(
seed) #random seed, control the model generates the same results
srng = T.shared_randomstreams.RandomStreams(rng.randint(seed))
word2id = {}
# all_sentences, all_masks, all_labels, all_other_labels, word2id=load_BBN_il5Trans_il5_dataset(maxlen=maxSentLen) #minlen, include one label, at least one word in the sentence
train_p1_sents, train_p1_masks, train_p1_labels, word2id = load_trainingData_types(
word2id, maxSentLen)
train_p2_sents, train_p2_masks, train_p2_labels, train_p2_other_labels, word2id = load_trainingData_types_plus_others(
word2id, maxSentLen)
test_sents, test_masks, test_lines, word2id = load_official_testData_il_and_MT(
word2id, maxSentLen, test_file_path)
label_sent, label_mask = load_SF_type_descriptions(word2id, type_size,
describ_max_len)
label_sent = np.asarray(label_sent, dtype='int32')
label_mask = np.asarray(label_mask, dtype=theano.config.floatX)
train_p1_sents = np.asarray(train_p1_sents, dtype='int32')
train_p1_masks = np.asarray(train_p1_masks, dtype=theano.config.floatX)
train_p1_labels = np.asarray(train_p1_labels, dtype='int32')
train_p1_size = len(train_p1_labels)
train_p2_sents = np.asarray(train_p2_sents, dtype='int32')
train_p2_masks = np.asarray(train_p2_masks, dtype=theano.config.floatX)
train_p2_labels = np.asarray(train_p2_labels, dtype='int32')
train_p2_other_labels = np.asarray(train_p2_other_labels, dtype='int32')
train_p2_size = len(train_p2_labels)
'''
combine train_p1 and train_p2
'''
train_sents = np.concatenate([train_p1_sents, train_p2_sents], axis=0)
train_masks = np.concatenate([train_p1_masks, train_p2_masks], axis=0)
train_labels = np.concatenate([train_p1_labels, train_p2_labels], axis=0)
train_size = train_p1_size + train_p2_size
test_sents = np.asarray(test_sents, dtype='int32')
test_masks = np.asarray(test_masks, dtype=theano.config.floatX)
# test_labels=np.asarray(all_labels[2], dtype='int32')
test_size = len(test_sents)
vocab_size = len(word2id) + 1 # add one zero pad index
rand_values = rng.normal(
0.0, 0.01,
(vocab_size, emb_size)) #generate a matrix by Gaussian distribution
rand_values[0] = np.array(np.zeros(emb_size), dtype=theano.config.floatX)
id2word = {y: x for x, y in word2id.iteritems()}
word2vec = load_fasttext_multiple_word2vec_given_file([
emb_root + '100k-ENG-multicca.300.ENG.txt',
emb_root + '100k-IL9-multicca.d300.IL9.txt'
], 300)
rand_values = load_word2vec_to_init(rand_values, id2word, word2vec)
embeddings = theano.shared(
value=np.array(rand_values, dtype=theano.config.floatX), borrow=True
) #wrap up the python variable "rand_values" into theano variable
#now, start to build the input form of the model
sents_id_matrix = T.imatrix('sents_id_matrix')
sents_mask = T.fmatrix('sents_mask')
labels = T.imatrix('labels') #batch*12
other_labels = T.imatrix() #batch*4
des_id_matrix = T.imatrix()
des_mask = T.fmatrix()
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
common_input = embeddings[sents_id_matrix.flatten()].reshape(
(batch_size, maxSentLen, emb_size)).dimshuffle(
0, 2, 1) #the input format can be adapted into CNN or GRU or LSTM
bow_emb = T.sum(common_input * sents_mask.dimshuffle(0, 'x', 1), axis=2)
repeat_common_input = T.repeat(
normalize_tensor3_colwise(common_input), type_size,
axis=0) #(batch_size*type_size, emb_size, maxsentlen)
des_input = embeddings[des_id_matrix.flatten()].reshape(
(type_size, describ_max_len, emb_size)).dimshuffle(0, 2, 1)
bow_des = T.sum(des_input * des_mask.dimshuffle(0, 'x', 1),
axis=2) #(tyope_size, emb_size)
repeat_des_input = T.tile(
normalize_tensor3_colwise(des_input),
(batch_size, 1, 1)) #(batch_size*type_size, emb_size, maxsentlen)
conv_W, conv_b = create_conv_para(rng,
filter_shape=(hidden_size[0], 1,
emb_size, filter_size[0]))
conv_W2, conv_b2 = create_conv_para(rng,
filter_shape=(hidden_size[0], 1,
emb_size,
filter_size[1]))
multiCNN_para = [conv_W, conv_b, conv_W2, conv_b2]
conv_att_W, conv_att_b = create_conv_para(rng,
filter_shape=(hidden_size[0], 1,
emb_size,
filter_size[0]))
conv_W_context, conv_b_context = create_conv_para(
rng, filter_shape=(hidden_size[0], 1, emb_size, 1))
conv_att_W2, conv_att_b2 = create_conv_para(rng,
filter_shape=(hidden_size[0],
1, emb_size,
filter_size[1]))
conv_W_context2, conv_b_context2 = create_conv_para(
rng, filter_shape=(hidden_size[0], 1, emb_size, 1))
ACNN_para = [
conv_att_W, conv_att_b, conv_W_context, conv_att_W2, conv_att_b2,
conv_W_context2
]
'''
multi-CNN
'''
conv_model = Conv_with_Mask(
rng,
input_tensor3=common_input,
mask_matrix=sents_mask,
image_shape=(batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
W=conv_W,
b=conv_b
) #mutiple mask with the conv_out to set the features by UNK to zero
sent_embeddings = conv_model.maxpool_vec #(batch_size, hidden_size) # each sentence then have an embedding of length hidden_size
conv_model2 = Conv_with_Mask(
rng,
input_tensor3=common_input,
mask_matrix=sents_mask,
image_shape=(batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[1]),
W=conv_W2,
b=conv_b2
) #mutiple mask with the conv_out to set the features by UNK to zero
sent_embeddings2 = conv_model2.maxpool_vec #(batch_size, hidden_size) # each sentence then have an embedding of length hidden_size
'''
GRU
'''
U1, W1, b1 = create_GRU_para(rng, emb_size, hidden_size[0])
GRU_NN_para = [
U1, W1, b1
] #U1 includes 3 matrices, W1 also includes 3 matrices b1 is bias
# gru_input = common_input.dimshuffle((0,2,1)) #gru requires input (batch_size, emb_size, maxSentLen)
gru_layer = GRU_Batch_Tensor_Input_with_Mask(common_input, sents_mask,
hidden_size[0], U1, W1, b1)
gru_sent_embeddings = gru_layer.output_sent_rep # (batch_size, hidden_size)
'''
ACNN
'''
attentive_conv_layer = Attentive_Conv_for_Pair(
rng,
origin_input_tensor3=common_input,
origin_input_tensor3_r=common_input,
input_tensor3=common_input,
input_tensor3_r=common_input,
mask_matrix=sents_mask,
mask_matrix_r=sents_mask,
image_shape=(batch_size, 1, emb_size, maxSentLen),
image_shape_r=(batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[0], 1, emb_size, 1),
W=conv_att_W,
b=conv_att_b,
W_context=conv_W_context,
b_context=conv_b_context)
sent_att_embeddings = attentive_conv_layer.attentive_maxpool_vec_l
attentive_conv_layer2 = Attentive_Conv_for_Pair(
rng,
origin_input_tensor3=common_input,
origin_input_tensor3_r=common_input,
input_tensor3=common_input,
input_tensor3_r=common_input,
mask_matrix=sents_mask,
mask_matrix_r=sents_mask,
image_shape=(batch_size, 1, emb_size, maxSentLen),
image_shape_r=(batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size[0], 1, emb_size, filter_size[1]),
filter_shape_context=(hidden_size[0], 1, emb_size, 1),
W=conv_att_W2,
b=conv_att_b2,
W_context=conv_W_context2,
b_context=conv_b_context2)
sent_att_embeddings2 = attentive_conv_layer2.attentive_maxpool_vec_l
'''
cross-DNN-dataless
'''
#first map label emb into hidden space
HL_layer_1_W, HL_layer_1_b = create_HiddenLayer_para(
rng, emb_size, hidden_size[0])
HL_layer_1_params = [HL_layer_1_W, HL_layer_1_b]
HL_layer_1 = HiddenLayer(rng,
input=bow_des,
n_in=emb_size,
n_out=hidden_size[0],
W=HL_layer_1_W,
b=HL_layer_1_b,
activation=T.tanh)
des_rep_hidden = HL_layer_1.output #(type_size, hidden_size)
dot_dnn_dataless_1 = T.tanh(sent_embeddings.dot(
des_rep_hidden.T)) #(batch_size, type_size)
dot_dnn_dataless_2 = T.tanh(sent_embeddings2.dot(des_rep_hidden.T))
'''
dataless cosine
'''
cosine_scores = normalize_matrix_rowwise(bow_emb).dot(
normalize_matrix_rowwise(bow_des).T)
cosine_score_matrix = T.nnet.sigmoid(
cosine_scores) #(batch_size, type_size)
'''
dataless top-30 fine grained cosine
'''
fine_grained_cosine = T.batched_dot(
repeat_common_input.dimshuffle(0, 2, 1),
repeat_des_input) #(batch_size*type_size,maxsentlen,describ_max_len)
fine_grained_cosine_to_matrix = fine_grained_cosine.reshape(
(batch_size * type_size, maxSentLen * describ_max_len))
sort_fine_grained_cosine_to_matrix = T.sort(fine_grained_cosine_to_matrix,
axis=1)
top_k_simi = sort_fine_grained_cosine_to_matrix[:,
-30:] # (batch_size*type_size, 5)
max_fine_grained_cosine = T.mean(top_k_simi, axis=1)
top_k_cosine_scores = max_fine_grained_cosine.reshape(
(batch_size, type_size))
top_k_score_matrix = T.nnet.sigmoid(top_k_cosine_scores)
acnn_LR_input = T.concatenate([
dot_dnn_dataless_1, dot_dnn_dataless_2, cosine_score_matrix,
top_k_score_matrix, sent_embeddings, sent_embeddings2,
gru_sent_embeddings, sent_att_embeddings, sent_att_embeddings2, bow_emb
],
axis=1)
acnn_LR_input_size = hidden_size[0] * 5 + emb_size + 4 * type_size
#classification layer, it is just mapping from a feature vector of size "hidden_size" to a vector of only two values: positive, negative
acnn_U_a, acnn_LR_b = create_LR_para(rng, acnn_LR_input_size, 12)
acnn_LR_para = [acnn_U_a, acnn_LR_b]
acnn_layer_LR = LogisticRegression(
rng,
input=acnn_LR_input,
n_in=acnn_LR_input_size,
n_out=12,
W=acnn_U_a,
b=acnn_LR_b
) #basically it is a multiplication between weight matrix and input feature vector
acnn_score_matrix = T.nnet.sigmoid(
acnn_layer_LR.before_softmax) #batch * 12
acnn_prob_pos = T.where(labels < 1, 1.0 - acnn_score_matrix,
acnn_score_matrix)
acnn_loss = -T.mean(T.log(acnn_prob_pos))
acnn_other_U_a, acnn_other_LR_b = create_LR_para(rng, acnn_LR_input_size,
16)
acnn_other_LR_para = [acnn_other_U_a, acnn_other_LR_b]
acnn_other_layer_LR = LogisticRegression(rng,
input=acnn_LR_input,
n_in=acnn_LR_input_size,
n_out=16,
W=acnn_other_U_a,
b=acnn_other_LR_b)
acnn_other_prob_matrix = T.nnet.softmax(
acnn_other_layer_LR.before_softmax.reshape((batch_size * 4, 4)))
acnn_other_prob_tensor3 = acnn_other_prob_matrix.reshape(
(batch_size, 4, 4))
acnn_other_prob = acnn_other_prob_tensor3[
T.repeat(T.arange(batch_size), 4),
T.tile(T.arange(4), (batch_size)),
other_labels.flatten()]
acnn_other_field_loss = -T.mean(T.log(acnn_other_prob))
params = multiCNN_para + GRU_NN_para + ACNN_para + acnn_LR_para + HL_layer_1_params # put all model parameters together
cost = acnn_loss + 1e-4 * ((conv_W**2).sum() + (conv_W2**2).sum() +
(conv_att_W**2).sum() + (conv_att_W2**2).sum())
updates = Gradient_Cost_Para(cost, params, learning_rate)
other_paras = params + acnn_other_LR_para
cost_other = cost + acnn_other_field_loss
other_updates = Gradient_Cost_Para(cost_other, other_paras, learning_rate)
'''
testing
'''
ensemble_NN_scores = acnn_score_matrix #T.max(T.concatenate([att_score_matrix.dimshuffle('x',0,1), score_matrix.dimshuffle('x',0,1), acnn_score_matrix.dimshuffle('x',0,1)],axis=0),axis=0)
# '''
# majority voting, does not work
# '''
# binarize_NN = T.where(ensemble_NN_scores > 0.5, 1, 0)
# binarize_dataless = T.where(cosine_score_matrix > 0.5, 1, 0)
# binarize_dataless_finegrained = T.where(top_k_score_matrix > 0.5, 1, 0)
# binarize_conc = T.concatenate([binarize_NN.dimshuffle('x',0,1), binarize_dataless.dimshuffle('x',0,1),binarize_dataless_finegrained.dimshuffle('x',0,1)],axis=0)
# sum_binarize_conc = T.sum(binarize_conc,axis=0)
# binarize_prob = T.where(sum_binarize_conc > 0.0, 1, 0)
# '''
# sum up prob, works
# '''
# ensemble_scores_1 = 0.6*ensemble_NN_scores+0.4*top_k_score_matrix
# binarize_prob = T.where(ensemble_scores_1 > 0.3, 1, 0)
'''
sum up prob, works
'''
ensemble_scores = ensemble_NN_scores #0.6*ensemble_NN_scores+0.4*0.5*(cosine_score_matrix+top_k_score_matrix)
binarize_prob = T.where(ensemble_scores > 0.3, 1, 0)
'''
test for other fields
'''
sum_tensor3 = acnn_other_prob_tensor3 #(batch, 4, 3)
#train_model = theano.function([sents_id_matrix, sents_mask, labels], cost, updates=updates, on_unused_input='ignore')
train_p1_model = theano.function(
[sents_id_matrix, sents_mask, labels, des_id_matrix, des_mask],
cost,
updates=updates,
allow_input_downcast=True,
on_unused_input='ignore')
train_p2_model = theano.function([
sents_id_matrix, sents_mask, labels, des_id_matrix, des_mask,
other_labels
],
cost_other,
updates=other_updates,
allow_input_downcast=True,
on_unused_input='ignore')
test_model = theano.function(
[sents_id_matrix, sents_mask, des_id_matrix, des_mask],
[binarize_prob, ensemble_scores, sum_tensor3],
allow_input_downcast=True,
on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 50000000000 # look as this many examples regardless
start_time = time.time()
mid_time = start_time
past_time = mid_time
epoch = 0
done_looping = False
n_train_batches = train_size / batch_size
train_batch_start = list(
np.arange(n_train_batches) * batch_size) + [train_size - batch_size]
n_train_p2_batches = train_p2_size / batch_size
train_p2_batch_start = list(np.arange(n_train_p2_batches) *
batch_size) + [train_p2_size - batch_size]
n_test_batches = test_size / batch_size
n_test_remain = test_size % batch_size
test_batch_start = list(
np.arange(n_test_batches) * batch_size) + [test_size - batch_size]
train_p2_batch_start_set = set(train_p2_batch_start)
# max_acc_dev=0.0
# max_meanf1_test=0.0
# max_weightf1_test=0.0
train_indices = range(train_size)
train_p2_indices = range(train_p2_size)
cost_i = 0.0
other_cost_i = 0.0
min_mean_frame = 100.0
while epoch < n_epochs:
epoch = epoch + 1
random.Random(100).shuffle(train_indices)
random.Random(100).shuffle(train_p2_indices)
iter_accu = 0
for batch_id in train_batch_start: #for each batch
# iter means how many batches have been run, taking into loop
iter = (epoch - 1) * n_train_batches + iter_accu + 1
iter_accu += 1
train_id_batch = train_indices[batch_id:batch_id + batch_size]
cost_i += train_p1_model(train_sents[train_id_batch],
train_masks[train_id_batch],
train_labels[train_id_batch], label_sent,
label_mask)
if batch_id in train_p2_batch_start_set:
train_p2_id_batch = train_p2_indices[batch_id:batch_id +
batch_size]
other_cost_i += train_p2_model(
train_p2_sents[train_p2_id_batch],
train_p2_masks[train_p2_id_batch],
train_p2_labels[train_p2_id_batch], label_sent, label_mask,
train_p2_other_labels[train_p2_id_batch])
# else:
# random_batch_id = random.choice(train_p2_batch_start)
# train_p2_id_batch = train_p2_indices[random_batch_id:random_batch_id+batch_size]
# other_cost_i+=train_p2_model(
# train_p2_sents[train_p2_id_batch],
# train_p2_masks[train_p2_id_batch],
# train_p2_labels[train_p2_id_batch],
# label_sent,
# label_mask,
# train_p2_other_labels[train_p2_id_batch]
# )
#after each 1000 batches, we test the performance of the model on all test data
if iter % 20 == 0:
print 'Epoch ', epoch, 'iter ' + str(
iter) + ' average cost: ' + str(cost_i / iter), str(
other_cost_i /
iter), 'uses ', (time.time() - past_time) / 60.0, 'min'
past_time = time.time()
pred_types = []
pred_confs = []
pred_others = []
for i, test_batch_id in enumerate(
test_batch_start): # for each test batch
pred_types_i, pred_conf_i, pred_fields_i = test_model(
test_sents[test_batch_id:test_batch_id + batch_size],
test_masks[test_batch_id:test_batch_id + batch_size],
label_sent, label_mask)
if i < len(test_batch_start) - 1:
pred_types.append(pred_types_i)
pred_confs.append(pred_conf_i)
pred_others.append(pred_fields_i)
else:
pred_types.append(pred_types_i[-n_test_remain:])
pred_confs.append(pred_conf_i[-n_test_remain:])
pred_others.append(pred_fields_i[-n_test_remain:])
pred_types = np.concatenate(pred_types, axis=0)
pred_confs = np.concatenate(pred_confs, axis=0)
pred_others = np.concatenate(pred_others, axis=0)
mean_frame = generate_2018_official_output(
test_lines, output_file_path, pred_types, pred_confs,
pred_others, min_mean_frame)
if mean_frame < min_mean_frame:
min_mean_frame = mean_frame
print '\t\t\t test over, min_mean_frame:', min_mean_frame
print 'Epoch ', epoch, 'uses ', (time.time() - mid_time) / 60.0, 'min'
mid_time = time.time()
#print 'Batch_size: ', update_freq
end_time = time.time()
print >> sys.stderr, ('The code for file ' + os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(learning_rate=0.09, n_epochs=2000, nkerns=[50,50], batch_size=1, window_width=3,
maxSentLength=64, maxDocLength=60, emb_size=300, hidden_size=200,
margin=0.5, L2_weight=0.00065, update_freq=1, norm_threshold=5.0, max_s_length=57, max_d_length=59):
maxSentLength=max_s_length+2*(window_width-1)
maxDocLength=max_d_length+2*(window_width-1)
model_options = locals().copy()
print "model options", model_options
rootPath='/mounts/data/proj/wenpeng/Dataset/MCTest/';
rng = numpy.random.RandomState(23455)
train_data,train_size, test_data, test_size, vocab_size=load_MCTest_corpus(rootPath+'vocab.txt', rootPath+'mc500.train.tsv_standardlized.txt', rootPath+'mc500.test.tsv_standardlized.txt', max_s_length,maxSentLength, maxDocLength)#vocab_size contain train, dev and test
#datasets_nonoverlap, vocab_size_nonoverlap=load_SICK_corpus(rootPath+'vocab_nonoverlap_train_plus_dev.txt', rootPath+'train_plus_dev_removed_overlap_as_training.txt', rootPath+'test_removed_overlap_as_training.txt', max_truncate_nonoverlap,maxSentLength_nonoverlap, entailment=True)
#datasets, vocab_size=load_wikiQA_corpus(rootPath+'vocab_lower_in_word2vec.txt', rootPath+'WikiQA-train.txt', rootPath+'test_filtered.txt', maxSentLength)#vocab_size contain train, dev and test
#mtPath='/mounts/data/proj/wenpeng/Dataset/WikiQACorpus/MT/BLEU_NIST/'
# mt_train, mt_test=load_mts_wikiQA(rootPath+'Train_plus_dev_MT/concate_14mt_train.txt', rootPath+'Test_MT/concate_14mt_test.txt')
# extra_train, extra_test=load_extra_features(rootPath+'train_plus_dev_rule_features_cosine_eucli_negation_len1_len2_syn_hyper1_hyper2_anto(newsimi0.4).txt', rootPath+'test_rule_features_cosine_eucli_negation_len1_len2_syn_hyper1_hyper2_anto(newsimi0.4).txt')
# discri_train, discri_test=load_extra_features(rootPath+'train_plus_dev_discri_features_0.3.txt', rootPath+'test_discri_features_0.3.txt')
#wm_train, wm_test=load_wmf_wikiQA(rootPath+'train_word_matching_scores.txt', rootPath+'test_word_matching_scores.txt')
#wm_train, wm_test=load_wmf_wikiQA(rootPath+'train_word_matching_scores_normalized.txt', rootPath+'test_word_matching_scores_normalized.txt')
[train_data_D, train_data_Q, train_data_A, train_Y, train_Label,
train_Length_D,train_Length_D_s, train_Length_Q, train_Length_A,
train_leftPad_D,train_leftPad_D_s, train_leftPad_Q, train_leftPad_A,
train_rightPad_D,train_rightPad_D_s, train_rightPad_Q, train_rightPad_A]=train_data
[test_data_D, test_data_Q, test_data_A, test_Y, test_Label,
test_Length_D,test_Length_D_s, test_Length_Q, test_Length_A,
test_leftPad_D,test_leftPad_D_s, test_leftPad_Q, test_leftPad_A,
test_rightPad_D,test_rightPad_D_s, test_rightPad_Q, test_rightPad_A]=test_data
n_train_batches=train_size/batch_size
n_test_batches=test_size/batch_size
train_batch_start=list(numpy.arange(n_train_batches)*batch_size)
test_batch_start=list(numpy.arange(n_test_batches)*batch_size)
# indices_train_l=theano.shared(numpy.asarray(indices_train_l, dtype=theano.config.floatX), borrow=True)
# indices_train_r=theano.shared(numpy.asarray(indices_train_r, dtype=theano.config.floatX), borrow=True)
# indices_test_l=theano.shared(numpy.asarray(indices_test_l, dtype=theano.config.floatX), borrow=True)
# indices_test_r=theano.shared(numpy.asarray(indices_test_r, dtype=theano.config.floatX), borrow=True)
# indices_train_l=T.cast(indices_train_l, 'int64')
# indices_train_r=T.cast(indices_train_r, 'int64')
# indices_test_l=T.cast(indices_test_l, 'int64')
# indices_test_r=T.cast(indices_test_r, 'int64')
rand_values=random_value_normal((vocab_size+1, emb_size), theano.config.floatX, numpy.random.RandomState(1234))
rand_values[0]=numpy.array(numpy.zeros(emb_size),dtype=theano.config.floatX)
#rand_values[0]=numpy.array([1e-50]*emb_size)
rand_values=load_word2vec_to_init(rand_values, rootPath+'vocab_embs_300d.txt')
#rand_values=load_word2vec_to_init(rand_values, rootPath+'vocab_lower_in_word2vec_embs_300d.txt')
embeddings=theano.shared(value=rand_values, borrow=True)
#cost_tmp=0
error_sum=0
# allocate symbolic variables for the data
index = T.lscalar()
index_D = T.lmatrix() # now, x is the index matrix, must be integer
index_Q = T.lvector()
index_A= T.lvector()
y = T.lvector()
len_D=T.lscalar()
len_D_s=T.lvector()
len_Q=T.lscalar()
len_A=T.lscalar()
left_D=T.lscalar()
left_D_s=T.lvector()
left_Q=T.lscalar()
left_A=T.lscalar()
right_D=T.lscalar()
right_D_s=T.lvector()
right_Q=T.lscalar()
right_A=T.lscalar()
#wmf=T.dmatrix()
cost_tmp=T.dscalar()
#x=embeddings[x_index.flatten()].reshape(((batch_size*4),maxSentLength, emb_size)).transpose(0, 2, 1).flatten()
ishape = (emb_size, maxSentLength) # sentence shape
dshape = (nkerns[0], maxDocLength) # doc shape
filter_words=(emb_size,window_width)
filter_sents=(nkerns[0], window_width)
#poolsize1=(1, ishape[1]-filter_size[1]+1) #?????????????????????????????
# length_after_wideConv=ishape[1]+filter_size[1]-1
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
# Reshape matrix of rasterized images of shape (batch_size,28*28)
# to a 4D tensor, compatible with our LeNetConvPoolLayer
#layer0_input = x.reshape(((batch_size*4), 1, ishape[0], ishape[1]))
layer0_D_input = embeddings[index_D.flatten()].reshape((maxDocLength,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_Q_input = embeddings[index_Q.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_A_input = embeddings[index_A.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
conv_W, conv_b=create_conv_para(rng, filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]))
# load_model_for_conv1([conv_W, conv_b])
layer0_D = Conv_with_input_para(rng, input=layer0_D_input,
image_shape=(maxDocLength, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]), W=conv_W, b=conv_b)
layer0_Q = Conv_with_input_para(rng, input=layer0_Q_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]), W=conv_W, b=conv_b)
layer0_A = Conv_with_input_para(rng, input=layer0_A_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]), W=conv_W, b=conv_b)
layer0_D_output=debug_print(layer0_D.output, 'layer0_D.output')
layer0_Q_output=debug_print(layer0_Q.output, 'layer0_Q.output')
layer0_A_output=debug_print(layer0_A.output, 'layer0_A.output')
layer0_para=[conv_W, conv_b]
layer1_DQ=Average_Pooling_Scan(rng, input_D=layer0_D_output, input_r=layer0_Q_output, kern=nkerns[0],
left_D=left_D, right_D=right_D,
left_D_s=left_D_s, right_D_s=right_D_s, left_r=left_Q, right_r=right_Q,
length_D_s=len_D_s+filter_words[1]-1, length_r=len_Q+filter_words[1]-1,
dim=maxSentLength+filter_words[1]-1, doc_len=maxDocLength, topk=3)
layer1_DA=Average_Pooling_Scan(rng, input_D=layer0_D_output, input_r=layer0_A_output, kern=nkerns[0],
left_D=left_D, right_D=right_D,
left_D_s=left_D_s, right_D_s=right_D_s, left_r=left_A, right_r=right_A,
length_D_s=len_D_s+filter_words[1]-1, length_r=len_A+filter_words[1]-1,
dim=maxSentLength+filter_words[1]-1, doc_len=maxDocLength, topk=3)
conv2_W, conv2_b=create_conv_para(rng, filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]))
#load_model_for_conv2([conv2_W, conv2_b])#this can not be used, as the nkerns[0]!=filter_size[0]
#conv from sentence to doc
layer2_DQ = Conv_with_input_para(rng, input=layer1_DQ.output_D.reshape((batch_size, 1, nkerns[0], dshape[1])),
image_shape=(batch_size, 1, nkerns[0], dshape[1]),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
layer2_DA = Conv_with_input_para(rng, input=layer1_DA.output_D.reshape((batch_size, 1, nkerns[0], dshape[1])),
image_shape=(batch_size, 1, nkerns[0], dshape[1]),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
#conv single Q and A into doc level with same conv weights
layer2_Q = Conv_with_input_para_one_col_featuremap(rng, input=layer1_DQ.output_QA_sent_level_rep.reshape((batch_size, 1, nkerns[0], 1)),
image_shape=(batch_size, 1, nkerns[0], 1),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
layer2_A = Conv_with_input_para_one_col_featuremap(rng, input=layer1_DA.output_QA_sent_level_rep.reshape((batch_size, 1, nkerns[0], 1)),
image_shape=(batch_size, 1, nkerns[0], 1),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
layer2_Q_output_sent_rep_Dlevel=debug_print(layer2_Q.output_sent_rep_Dlevel, 'layer2_Q.output_sent_rep_Dlevel')
layer2_A_output_sent_rep_Dlevel=debug_print(layer2_A.output_sent_rep_Dlevel, 'layer2_A.output_sent_rep_Dlevel')
layer2_para=[conv2_W, conv2_b]
layer3_DQ=Average_Pooling_for_Top(rng, input_l=layer2_DQ.output, input_r=layer2_Q_output_sent_rep_Dlevel, kern=nkerns[1],
left_l=left_D, right_l=right_D, left_r=0, right_r=0,
length_l=len_D+filter_sents[1]-1, length_r=1,
dim=maxDocLength+filter_sents[1]-1, topk=3)
layer3_DA=Average_Pooling_for_Top(rng, input_l=layer2_DA.output, input_r=layer2_A_output_sent_rep_Dlevel, kern=nkerns[1],
left_l=left_D, right_l=right_D, left_r=0, right_r=0,
length_l=len_D+filter_sents[1]-1, length_r=1,
dim=maxDocLength+filter_sents[1]-1, topk=3)
#high-way
high_W, high_b=create_highw_para(rng, nkerns[0], nkerns[1])
transform_gate_DQ=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DQ.output_D_sent_level_rep) + high_b), 'transform_gate_DQ')
transform_gate_DA=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DA.output_D_sent_level_rep) + high_b), 'transform_gate_DA')
transform_gate_Q=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DQ.output_QA_sent_level_rep) + high_b), 'transform_gate_Q')
transform_gate_A=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DA.output_QA_sent_level_rep) + high_b), 'transform_gate_A')
highW_para=[high_W, high_b]
overall_D_Q=debug_print((1.0-transform_gate_DQ)*layer1_DQ.output_D_sent_level_rep+transform_gate_DQ*layer3_DQ.output_D_doc_level_rep, 'overall_D_Q')
overall_D_A=(1.0-transform_gate_DA)*layer1_DA.output_D_sent_level_rep+transform_gate_DA*layer3_DA.output_D_doc_level_rep
overall_Q=(1.0-transform_gate_Q)*layer1_DQ.output_QA_sent_level_rep+transform_gate_Q*layer2_Q.output_sent_rep_Dlevel
overall_A=(1.0-transform_gate_A)*layer1_DA.output_QA_sent_level_rep+transform_gate_A*layer2_A.output_sent_rep_Dlevel
simi_sent_level=debug_print(cosine(layer1_DQ.output_D_sent_level_rep+layer1_DA.output_D_sent_level_rep, layer1_DQ.output_QA_sent_level_rep+layer1_DA.output_QA_sent_level_rep), 'simi_sent_level')
simi_doc_level=debug_print(cosine(layer3_DQ.output_D_doc_level_rep+layer3_DA.output_D_doc_level_rep, layer2_Q.output_sent_rep_Dlevel+layer2_A.output_sent_rep_Dlevel), 'simi_doc_level')
simi_overall_level=debug_print(cosine(overall_D_Q+overall_D_A, overall_Q+overall_A), 'simi_overall_level')
# eucli_1=1.0/(1.0+EUCLID(layer3_DQ.output_D+layer3_DA.output_D, layer3_DQ.output_QA+layer3_DA.output_QA))
layer4_input=debug_print(T.concatenate([simi_sent_level,
simi_doc_level,
simi_overall_level
], axis=1), 'layer4_input')#, layer2.output, layer1.output_cosine], axis=1)
#layer3_input=T.concatenate([mts,eucli, uni_cosine, len_l, len_r, norm_uni_l-(norm_uni_l+norm_uni_r)/2], axis=1)
#layer3=LogisticRegression(rng, input=layer3_input, n_in=11, n_out=2)
layer4=LogisticRegression(rng, input=layer4_input, n_in=3, n_out=2)
#L2_reg =(layer3.W** 2).sum()+(layer2.W** 2).sum()+(layer1.W** 2).sum()+(conv_W** 2).sum()
L2_reg =debug_print((layer4.W** 2).sum()+(high_W**2).sum()+(conv2_W**2).sum()+(conv_W**2).sum(), 'L2_reg')#+(layer1.W** 2).sum()++(embeddings**2).sum()
cost_this =debug_print(layer4.negative_log_likelihood(y), 'cost_this')#+L2_weight*L2_reg
cost=debug_print((cost_this+cost_tmp)/update_freq+L2_weight*L2_reg, 'cost')
#cost=debug_print((cost_this+cost_tmp)/update_freq, 'cost')
#
# [train_data_D, train_data_Q, train_data_A, train_Y, train_Label,
# train_Length_D,train_Length_D_s, train_Length_Q, train_Length_A,
# train_leftPad_D,train_leftPad_D_s, train_leftPad_Q, train_leftPad_A,
# train_rightPad_D,train_rightPad_D_s, train_rightPad_Q, train_rightPad_A]=train_data
# [test_data_D, test_data_Q, test_data_A, test_Y, test_Label,
# test_Length_D,test_Length_D_s, test_Length_Q, test_Length_A,
# test_leftPad_D,test_leftPad_D_s, test_leftPad_Q, test_leftPad_A,
# test_rightPad_D,test_rightPad_D_s, test_rightPad_Q, test_rightPad_A]=test_data
# index = T.lscalar()
# index_D = T.lmatrix() # now, x is the index matrix, must be integer
# index_Q = T.lvector()
# index_A= T.lvector()
#
# y = T.lvector()
# len_D=T.lscalar()
# len_D_s=T.lvector()
# len_Q=T.lscalar()
# len_A=T.lscalar()
#
# left_D=T.lscalar()
# left_D_s=T.lvector()
# left_Q=T.lscalar()
# left_A=T.lscalar()
#
# right_D=T.lscalar()
# right_D_s=T.lvector()
# right_Q=T.lscalar()
# right_A=T.lscalar()
#
#
# #wmf=T.dmatrix()
# cost_tmp=T.dscalar()
test_model = theano.function([index], [layer4.errors(y),layer4_input, y, layer4.prop_for_posi],
givens={
index_D: test_data_D[index], #a matrix
index_Q: test_data_Q[index],
index_A: test_data_A[index],
y: test_Y[index:index+batch_size],
len_D: test_Length_D[index],
len_D_s: test_Length_D_s[index],
len_Q: test_Length_Q[index],
len_A: test_Length_A[index],
left_D: test_leftPad_D[index],
left_D_s: test_leftPad_D_s[index],
left_Q: test_leftPad_Q[index],
left_A: test_leftPad_A[index],
right_D: test_rightPad_D[index],
right_D_s: test_rightPad_D_s[index],
right_Q: test_rightPad_Q[index],
right_A: test_rightPad_A[index]
}, on_unused_input='ignore')
#params = layer3.params + layer2.params + layer1.params+ [conv_W, conv_b]
params = layer4.params+layer2_para+layer0_para+highW_para
accumulator=[]
for para_i in params:
eps_p=numpy.zeros_like(para_i.get_value(borrow=True),dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
grad_i=debug_print(grad_i,'grad_i')
acc = acc_i + T.sqr(grad_i)
updates.append((param_i, param_i - learning_rate * grad_i / T.sqrt(acc))) #AdaGrad
updates.append((acc_i, acc))
train_model = theano.function([index,cost_tmp], cost, updates=updates,
givens={
index_D: train_data_D[index],
index_Q: train_data_Q[index],
index_A: train_data_A[index],
y: train_Y[index:index+batch_size],
len_D: train_Length_D[index],
len_D_s: train_Length_D_s[index],
len_Q: train_Length_Q[index],
len_A: train_Length_A[index],
left_D: train_leftPad_D[index],
left_D_s: train_leftPad_D_s[index],
left_Q: train_leftPad_Q[index],
left_A: train_leftPad_A[index],
right_D: train_rightPad_D[index],
right_D_s: train_rightPad_D_s[index],
right_Q: train_rightPad_Q[index],
right_A: train_rightPad_A[index]
}, on_unused_input='ignore')
train_model_predict = theano.function([index], [cost_this,layer4.errors(y), layer4_input, y],
givens={
index_D: train_data_D[index],
index_Q: train_data_Q[index],
index_A: train_data_A[index],
y: train_Y[index:index+batch_size],
len_D: train_Length_D[index],
len_D_s: train_Length_D_s[index],
len_Q: train_Length_Q[index],
len_A: train_Length_A[index],
left_D: train_leftPad_D[index],
left_D_s: train_leftPad_D_s[index],
left_Q: train_leftPad_Q[index],
left_A: train_leftPad_A[index],
right_D: train_rightPad_D[index],
right_D_s: train_rightPad_D_s[index],
right_Q: train_rightPad_Q[index],
right_A: train_rightPad_A[index]
}, on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
patience_increase = 2 # wait this much longer when a new best is
# found
improvement_threshold = 0.995 # a relative improvement of this much is
# considered significant
validation_frequency = min(n_train_batches, patience / 2)
# go through this many
# minibatche before checking the network
# on the validation set; in this case we
# check every epoch
best_params = None
best_validation_loss = numpy.inf
best_iter = 0
test_score = 0.
start_time = time.clock()
mid_time = start_time
epoch = 0
done_looping = False
max_acc=0.0
best_epoch=0
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
#for minibatch_index in xrange(n_train_batches): # each batch
minibatch_index=0
#shuffle(train_batch_start)#shuffle training data
cost_tmp=0.0
# readfile=open('/mounts/data/proj/wenpeng/Dataset/SICK/train_plus_dev.txt', 'r')
# train_pairs=[]
# train_y=[]
# for line in readfile:
# tokens=line.strip().split('\t')
# listt=tokens[0]+'\t'+tokens[1]
# train_pairs.append(listt)
# train_y.append(tokens[2])
# readfile.close()
# writefile=open('/mounts/data/proj/wenpeng/Dataset/SICK/weights_fine_tune.txt', 'w')
for batch_start in train_batch_start:
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * n_train_batches + minibatch_index +1
sys.stdout.write( "Training :[%6f] %% complete!\r" % (batch_start*100.0/train_size) )
sys.stdout.flush()
minibatch_index=minibatch_index+1
#if epoch %2 ==0:
# batch_start=batch_start+remain_train
#time.sleep(0.5)
#print batch_start
if iter%update_freq != 0:
cost_ij, error_ij, layer3_input, y=train_model_predict(batch_start)
#print 'layer3_input', layer3_input
cost_tmp+=cost_ij
error_sum+=error_ij
else:
cost_average= train_model(batch_start,cost_tmp)
#print 'layer3_input', layer3_input
error_sum=0
cost_tmp=0.0#reset for the next batch
#print 'cost_average ', cost_average
#print 'cost_this ',cost_this
#exit(0)
#exit(0)
if iter % n_train_batches == 0:
print 'training @ iter = '+str(iter)+' average cost: '+str(cost_average)
if iter % validation_frequency == 0:
#write_file=open('log.txt', 'w')
test_losses=[]
test_y=[]
test_features=[]
test_prop=[]
for i in test_batch_start:
test_loss, layer3_input, y, posi_prop=test_model(i)
test_prop.append(posi_prop[0][0])
#test_losses = [test_model(i) for i in test_batch_start]
test_losses.append(test_loss)
test_y.append(y[0])
test_features.append(layer3_input[0])
#write_file.write(str(pred_y[0])+'\n')#+'\t'+str(testY[i].eval())+
#write_file.close()
#test_score = numpy.mean(test_losses)
test_acc=compute_test_acc(test_y, test_prop)
#test_acc=1-test_score
print(('\t\t\tepoch %i, minibatch %i/%i, test acc of best '
'model %f %%') %
(epoch, minibatch_index, n_train_batches,test_acc * 100.))
#now, see the results of LR
#write_feature=open(rootPath+'feature_check.txt', 'w')
train_y=[]
train_features=[]
count=0
for batch_start in train_batch_start:
cost_ij, error_ij, layer3_input, y=train_model_predict(batch_start)
train_y.append(y[0])
train_features.append(layer3_input[0])
#write_feature.write(str(batch_start)+' '+' '.join(map(str,layer3_input[0]))+'\n')
#count+=1
#write_feature.close()
clf = svm.SVC(kernel='linear')#OneVsRestClassifier(LinearSVC()) #linear 76.11%, poly 75.19, sigmoid 66.50, rbf 73.33
clf.fit(train_features, train_y)
results=clf.decision_function(test_features)
lr=linear_model.LogisticRegression(C=1e5)
lr.fit(train_features, train_y)
results_lr=lr.decision_function(test_features)
acc_svm=compute_test_acc(test_y, results)
acc_lr=compute_test_acc(test_y, results_lr)
find_better=False
if acc_svm > max_acc:
max_acc=acc_svm
best_epoch=epoch
find_better=True
if test_acc > max_acc:
max_acc=test_acc
best_epoch=epoch
find_better=True
if acc_lr> max_acc:
max_acc=acc_lr
best_epoch=epoch
find_better=True
print '\t\t\tsvm:', acc_svm, 'lr:', acc_lr, 'nn:', test_acc, 'max:', max_acc,'(at',best_epoch,')'
# if find_better==True:
# store_model_to_file(layer2_para, best_epoch)
# print 'Finished storing best conv params'
if patience <= iter:
done_looping = True
break
print 'Epoch ', epoch, 'uses ', (time.clock()-mid_time)/60.0, 'min'
mid_time = time.clock()
#writefile.close()
#print 'Batch_size: ', update_freq
end_time = time.clock()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' +
os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(learning_rate=0.02, n_epochs=4, L2_weight=1e-5, extra_size=4, emb_size=300, batch_size=100, filter_size=[3,3], maxSentLen=40, hidden_size=[300,300], max_term_len=4, p_mode = 'conc'):
model_options = locals().copy()
print "model options", model_options
seed=1234
np.random.seed(seed)
rng = np.random.RandomState(seed) #random seed, control the model generates the same results
# all_sentences_l, all_masks_l, all_sentences_r, all_masks_r, all_word1,all_word2,all_word1_mask,all_word2_mask,all_labels, all_extra, word2id =load_wordnet_hyper_vs_all_with_words(maxlen=maxSentLen, wordlen=max_term_len) #minlen, include one label, at least one word in the sentence
# test_sents_l, test_masks_l, test_sents_r, test_masks_r, test_labels, word2id =load_ACE05_dataset(maxSentLen, word2id)
word2id = load_word2id(root_dic+'LenciBenotto_word2id.pkl')
test_sents_l, test_masks_l, test_sents_r, test_masks_r, test_word1,test_word2,test_word1_mask,test_word2_mask,test_labels, test_extra, word2id, group_size_list = load_task_hyper_vs_all_with_allDefComb(LenciBenotto_file,maxSentLen, word2id, wordlen=max_term_len)
test_sents_l=np.asarray(test_sents_l, dtype='int32')
test_masks_l=np.asarray(test_masks_l, dtype=theano.config.floatX)
test_sents_r=np.asarray(test_sents_r, dtype='int32')
test_masks_r=np.asarray(test_masks_r, dtype=theano.config.floatX)
test_word1=np.asarray(test_word1, dtype='int32')
test_word2=np.asarray(test_word2, dtype='int32')
test_word1_mask=np.asarray(test_word1_mask, dtype=theano.config.floatX)
test_word2_mask=np.asarray(test_word2_mask, dtype=theano.config.floatX)
test_labels_store=np.asarray(test_labels, dtype='int32')
test_extra=np.asarray(test_extra, dtype=theano.config.floatX)
# train_size=len(train_labels_store)
# dev_size=len(dev_labels_store)
test_size=len(test_sents_l)
print ' test size: ', test_size
vocab_size=len(word2id)+1
rand_values=rng.normal(0.0, 0.01, (vocab_size, emb_size)) #generate a matrix by Gaussian distribution
rand_values[0]=np.array(np.zeros(emb_size),dtype=theano.config.floatX)
id2word = {y:x for x,y in word2id.iteritems()}
word2vec=load_word2vec()
rand_values=load_word2vec_to_init(rand_values, id2word, word2vec)
init_embeddings=theano.shared(value=np.array(rand_values,dtype=theano.config.floatX), borrow=True) #wrap up the python variable "rand_values" into theano variable
# load_model_from_file(root_dic+'Weeds_best_para_init_embeddings', [init_embeddings])
#now, start to build the input form of the model
sents_ids_l=T.imatrix()
sents_mask_l=T.fmatrix()
sents_ids_r=T.imatrix()
sents_mask_r=T.fmatrix()
word1_ids = T.imatrix()
word2_ids = T.imatrix()
word1_mask = T.fmatrix()
word2_mask = T.fmatrix()
extra = T.fvector()
labels=T.ivector()
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
def embed_input(emb_matrix, sent_ids):
return emb_matrix[sent_ids.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1)
embed_input_l=embed_input(init_embeddings, sents_ids_l)#embeddings[sents_ids_l.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1) #the input format can be adapted into CNN or GRU or LSTM
embed_input_r=embed_input(init_embeddings, sents_ids_r)#embeddings[sents_ids_r.flatten()].reshape((batch_size,maxSentLen, emb_size)).dimshuffle(0,2,1)
embed_word1 = init_embeddings[word1_ids.flatten()].reshape((batch_size,word1_ids.shape[1], emb_size))
embed_word2 = init_embeddings[word2_ids.flatten()].reshape((batch_size,word2_ids.shape[1], emb_size))
word1_embedding = T.sum(embed_word1*word1_mask.dimshuffle(0,1,'x'), axis=1)
word2_embedding = T.sum(embed_word2*word2_mask.dimshuffle(0,1,'x'), axis=1)
'''create_AttentiveConv_params '''
conv_W, conv_b=create_conv_para(rng, filter_shape=(hidden_size[1], 1, emb_size, filter_size[0]))
conv_W_context, conv_b_context=create_conv_para(rng, filter_shape=(hidden_size[1], 1, emb_size, 1))
NN_para=[conv_W, conv_b,conv_W_context]
'''
attentive convolution function
'''
term_vs_term_layer = Conv_for_Pair(rng,
origin_input_tensor3=embed_word1.dimshuffle(0,2,1),
origin_input_tensor3_r = embed_word2.dimshuffle(0,2,1),
input_tensor3=embed_word1.dimshuffle(0,2,1),
input_tensor3_r = embed_word2.dimshuffle(0,2,1),
mask_matrix = word1_mask,
mask_matrix_r = word2_mask,
image_shape=(batch_size, 1, emb_size, max_term_len),
image_shape_r = (batch_size, 1, emb_size, max_term_len),
filter_shape=(hidden_size[1], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[1], 1,emb_size, 1),
W=conv_W, b=conv_b,
W_context=conv_W_context, b_context=conv_b_context)
tt_embeddings_l = term_vs_term_layer.attentive_maxpool_vec_l
tt_embeddings_r = term_vs_term_layer.attentive_maxpool_vec_r
p_ww = T.concatenate([tt_embeddings_l,tt_embeddings_r,tt_embeddings_l*tt_embeddings_r,tt_embeddings_l-tt_embeddings_r], axis=1)
term_vs_def_layer = Conv_for_Pair(rng,
origin_input_tensor3=embed_word1.dimshuffle(0,2,1),
origin_input_tensor3_r = embed_input_r,
input_tensor3=embed_word1.dimshuffle(0,2,1),
input_tensor3_r = embed_input_r,
mask_matrix = word1_mask,
mask_matrix_r = sents_mask_r,
image_shape=(batch_size, 1, emb_size, max_term_len),
image_shape_r = (batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size[1], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[1], 1,emb_size, 1),
W=conv_W, b=conv_b,
W_context=conv_W_context, b_context=conv_b_context)
td_embeddings_l = term_vs_def_layer.attentive_maxpool_vec_l
td_embeddings_r = term_vs_def_layer.attentive_maxpool_vec_r
p_wd = T.concatenate([td_embeddings_l,td_embeddings_r,td_embeddings_l*td_embeddings_r,td_embeddings_l-td_embeddings_r], axis=1)
def_vs_term_layer = Conv_for_Pair(rng,
origin_input_tensor3=embed_input_l,
origin_input_tensor3_r = embed_word2.dimshuffle(0,2,1),
input_tensor3=embed_input_l,
input_tensor3_r = embed_word2.dimshuffle(0,2,1),
mask_matrix = sents_mask_l,
mask_matrix_r = word2_mask,
image_shape=(batch_size, 1, emb_size, maxSentLen),
image_shape_r = (batch_size, 1, emb_size, max_term_len),
filter_shape=(hidden_size[1], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[1], 1,emb_size, 1),
W=conv_W, b=conv_b,
W_context=conv_W_context, b_context=conv_b_context)
dt_embeddings_l = def_vs_term_layer.attentive_maxpool_vec_l
dt_embeddings_r = def_vs_term_layer.attentive_maxpool_vec_r
p_dw = T.concatenate([dt_embeddings_l,dt_embeddings_r,dt_embeddings_l*dt_embeddings_r,dt_embeddings_l-dt_embeddings_r], axis=1)
def_vs_def_layer = Conv_for_Pair(rng,
origin_input_tensor3=embed_input_l,
origin_input_tensor3_r = embed_input_r,
input_tensor3=embed_input_l,
input_tensor3_r = embed_input_r,
mask_matrix = sents_mask_l,
mask_matrix_r = sents_mask_r,
image_shape=(batch_size, 1, emb_size, maxSentLen),
image_shape_r = (batch_size, 1, emb_size, maxSentLen),
filter_shape=(hidden_size[1], 1, emb_size, filter_size[0]),
filter_shape_context=(hidden_size[1], 1,emb_size, 1),
W=conv_W, b=conv_b,
W_context=conv_W_context, b_context=conv_b_context)
dd_embeddings_l = def_vs_def_layer.attentive_maxpool_vec_l
dd_embeddings_r = def_vs_def_layer.attentive_maxpool_vec_r
p_dd = T.concatenate([dd_embeddings_l,dd_embeddings_r,dd_embeddings_l*dd_embeddings_r,dd_embeddings_l-dd_embeddings_r], axis=1)
if p_mode == 'conc':
p=T.concatenate([p_ww, p_wd, p_dw, p_dd], axis=1)
p_len = 4*4*hidden_size[1]
else:
p = T.max(T.concatenate([p_ww.dimshuffle('x',0,1),p_wd.dimshuffle('x',0,1),p_dw.dimshuffle('x',0,1),p_dd.dimshuffle('x',0,1)],axis=0), axis=0)
p_len =4*hidden_size[1]
# HL_input = T.concatenate([p,cosine_matrix1_matrix2_rowwise(word1_embedding,word2_embedding).dimshuffle(0,'x'),extra.dimshuffle(0,'x')],axis=1)
# HL_input_size=p_len+1+1
#
# HL_layer_1=HiddenLayer(rng, input=HL_input, n_in=HL_input_size, n_out=hidden_size[1], activation=T.tanh)
"form input to LR classifier"
LR_input = T.concatenate([p,cosine_matrix1_matrix2_rowwise(word1_embedding,word2_embedding).dimshuffle(0,'x'),extra.dimshuffle(0,'x')],axis=1)
LR_input_size=p_len+1+1
# LR_input = HL_layer_1.output
# LR_input_size = hidden_size[1]
U_a = create_ensemble_para(rng, 2, LR_input_size) # the weight matrix hidden_size*2
LR_b = theano.shared(value=np.zeros((2,),dtype=theano.config.floatX),name='LR_b', borrow=True) #bias for each target class
LR_para=[U_a, LR_b]
layer_LR=LogisticRegression(rng, input=LR_input, n_in=LR_input_size, n_out=2, W=U_a, b=LR_b, bias=0.25) #basically it is a multiplication between weight matrix and input feature vector
loss=layer_LR.negative_log_likelihood(labels) #for classification task, we usually used negative log likelihood as loss, the lower the better.
# L2_reg = (conv_W**2).sum()+(conv_W_context**2).sum()+(U_a**2).sum()
params = NN_para+LR_para #[init_embeddings]
# load_model_from_file('/save/wenpeng/datasets/HypeNet/HyperDef_label_meta_best_para_0.938730853392', params)
load_model_from_file(root_dic+'LenciBenotto_best_para_0.557286573332', params)
'''
0.552587544259; current ap: 0.574037513126 ap@100 0.918481316424
0.557286573332; current ap: 0.576498645289 ap@100 0.909032657538
'''
test_model = theano.function([sents_ids_l, sents_mask_l, sents_ids_r, sents_mask_r, word1_ids,word2_ids,word1_mask,word2_mask,extra], [layer_LR.y_pred,layer_LR.prop_for_posi], allow_input_downcast=True, on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 50000000000 # look as this many examples regardless
start_time = time.time()
mid_time = start_time
past_time= mid_time
epoch = 0
done_looping = False
n_test_batches=test_size/batch_size
n_test_remain = test_size%batch_size
if n_test_remain!=0:
test_batch_start=list(np.arange(n_test_batches)*batch_size)+[test_size-batch_size]
else:
test_batch_start=list(np.arange(n_test_batches)*batch_size)
# max_acc_dev=0.0
max_ap_test=0.0
max_ap_topk_test=0.0
max_f1=0.0
pred_labels =[]
probs = []
gold_labels =[]
error_sum=0.0
for idd, test_batch_id in enumerate(test_batch_start): # for each test batch
pred_i, prob_i=test_model(
test_sents_l[test_batch_id:test_batch_id+batch_size],
test_masks_l[test_batch_id:test_batch_id+batch_size],
test_sents_r[test_batch_id:test_batch_id+batch_size],
test_masks_r[test_batch_id:test_batch_id+batch_size],
test_word1[test_batch_id:test_batch_id+batch_size],
test_word2[test_batch_id:test_batch_id+batch_size],
test_word1_mask[test_batch_id:test_batch_id+batch_size],
test_word2_mask[test_batch_id:test_batch_id+batch_size],
test_extra[test_batch_id:test_batch_id+batch_size])
# error_sum+=error_i
pred_labels+=list(pred_i)
probs+=list(prob_i)
print len(test_sents_l), len(probs)
if n_test_remain !=0:
probs = probs[:(len(test_batch_start)-1)*batch_size]+probs[-n_test_remain:]
print len(test_sents_l), len(probs)
assert len(test_sents_l) == len(probs)
assert sum(group_size_list) == len(probs)
#max prob in group
max_probs = []
prior_size = 0
for i in range(len(group_size_list)):
sub_probs = probs[prior_size:prior_size+group_size_list[i]]
prior_size += group_size_list[i]
max_probs.append(max(sub_probs))
print len(group_size_list),len(max_probs),len(test_labels)
assert len(test_labels) == len(max_probs)
# test_acc=1.0-error_sum/(len(test_batch_start))
test_ap = apk(test_labels, max_probs, k=len(test_labels))
test_ap_top100 = apk(test_labels, max_probs, k=100)
# if test_ap > max_ap_test:
# max_ap_test=test_ap
# store_model_to_file('/save/wenpeng/datasets/EVALution/HyperDef_label_4ways_conc_test_on_EVA_allDefComb_best_para_'+str(max_ap_test), params)
# if test_ap_top100 > max_ap_topk_test:
# max_ap_topk_test=test_ap_top100
print '\t\tcurrent ap:', test_ap,'ap@100', test_ap_top100
def evaluate_lenet5(learning_rate=0.01,
n_epochs=2000,
batch_size=100,
emb_size=300,
char_emb_size=20,
hidden_size=300,
L2_weight=0.0001,
p_len_limit=400,
test_p_len_limit=100,
q_len_limit=20,
char_len=15,
filter_size=[5, 5],
char_filter_size=3,
margin=2.0,
max_EM=50.302743615):
test_batch_size = batch_size * 10
model_options = locals().copy()
print "model options", model_options
rootPath = '/mounts/data/proj/wenpeng/Dataset/SQuAD/'
rng = numpy.random.RandomState(23455)
word2id = {}
char2id = {}
#questions,paragraphs,q_masks,p_masks,labels, word2id
train_Q_list, train_para_list, train_Q_mask, train_para_mask, train_Q_char_list, train_para_char_list, train_Q_char_mask, train_para_char_mask, train_label_list, word2id, char2id = load_squad_cnn_rank_word_train(
word2id, char2id, p_len_limit, q_len_limit, char_len)
train_size = len(train_para_list)
test_Q_list, test_para_list, test_Q_mask, test_para_mask, test_Q_char_list, test_para_char_list, test_Q_char_mask, test_para_char_mask, test_label_list, q_idlist, word2id, char2id, test_para_wordlist_list = load_squad_cnn_rank_word_dev(
word2id, char2id, test_p_len_limit, q_len_limit, char_len)
test_size = len(test_para_list)
train_Q_list = numpy.asarray(train_Q_list, dtype='int32')
train_para_list = numpy.asarray(train_para_list, dtype='int32')
train_Q_mask = numpy.asarray(train_Q_mask, dtype=theano.config.floatX)
train_para_mask = numpy.asarray(train_para_mask,
dtype=theano.config.floatX)
train_Q_char_list = numpy.asarray(train_Q_char_list, dtype='int32')
train_para_char_list = numpy.asarray(train_para_char_list, dtype='int32')
train_Q_char_mask = numpy.asarray(train_Q_char_mask,
dtype=theano.config.floatX)
train_para_char_mask = numpy.asarray(train_para_char_mask,
dtype=theano.config.floatX)
train_label_list = numpy.asarray(train_label_list, dtype='int32')
test_Q_list = numpy.asarray(test_Q_list, dtype='int32')
test_para_list = numpy.asarray(test_para_list, dtype='int32')
test_Q_mask = numpy.asarray(test_Q_mask, dtype=theano.config.floatX)
test_para_mask = numpy.asarray(test_para_mask, dtype=theano.config.floatX)
test_Q_char_list = numpy.asarray(test_Q_char_list, dtype='int32')
test_para_char_list = numpy.asarray(test_para_char_list, dtype='int32')
test_Q_char_mask = numpy.asarray(test_Q_char_mask,
dtype=theano.config.floatX)
test_para_char_mask = numpy.asarray(test_para_char_mask,
dtype=theano.config.floatX)
vocab_size = len(word2id)
print 'vocab size: ', vocab_size
rand_values = random_value_normal((vocab_size + 1, emb_size),
theano.config.floatX, rng)
rand_values[0] = numpy.array(numpy.zeros(emb_size),
dtype=theano.config.floatX)
id2word = {y: x for x, y in word2id.iteritems()}
word2vec = load_glove()
rand_values = load_word2vec_to_init(rand_values, id2word, word2vec)
embeddings = theano.shared(value=rand_values, borrow=True)
char_size = len(char2id)
print 'char size: ', char_size
char_rand_values = random_value_normal((char_size + 1, char_emb_size),
theano.config.floatX, rng)
char_embeddings = theano.shared(value=char_rand_values, borrow=True)
# allocate symbolic variables for the data
# index = T.lscalar()
paragraph = T.imatrix('paragraph')
questions = T.imatrix('questions')
gold_indices = T.imatrix() #batch, (start, end) for each sample
para_mask = T.fmatrix('para_mask')
q_mask = T.fmatrix('q_mask')
char_paragraph = T.imatrix() #(batch, char_len*p_len)
char_questions = T.imatrix()
char_para_mask = T.fmatrix()
char_q_mask = T.fmatrix()
true_p_len = T.iscalar()
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
true_batch_size = paragraph.shape[0]
common_input_p = embeddings[paragraph.flatten()].reshape(
(true_batch_size, true_p_len,
emb_size)) #the input format can be adapted into CNN or GRU or LSTM
common_input_q = embeddings[questions.flatten()].reshape(
(true_batch_size, q_len_limit, emb_size))
char_common_input_p = char_embeddings[char_paragraph.flatten()].reshape(
(true_batch_size * true_p_len, char_len, char_emb_size
)) #the input format can be adapted into CNN or GRU or LSTM
char_common_input_q = char_embeddings[char_questions.flatten()].reshape(
(true_batch_size * q_len_limit, char_len, char_emb_size))
char_p_masks = char_para_mask.reshape(
(true_batch_size * true_p_len, char_len))
char_q_masks = char_q_mask.reshape(
(true_batch_size * q_len_limit, char_len))
conv_W_char, conv_b_char = create_conv_para(
rng, filter_shape=(char_emb_size, 1, char_emb_size, char_filter_size))
conv_W_1, conv_b_1 = create_conv_para(
rng,
filter_shape=(hidden_size, 1, emb_size + char_emb_size,
filter_size[0]))
conv_W_2, conv_b_2 = create_conv_para(rng,
filter_shape=(hidden_size, 1,
hidden_size,
filter_size[1]))
conv_W_1_q, conv_b_1_q = create_conv_para(
rng,
filter_shape=(hidden_size, 1, emb_size + char_emb_size,
filter_size[0]))
conv_W_2_q, conv_b_2_q = create_conv_para(rng,
filter_shape=(hidden_size, 1,
hidden_size,
filter_size[1]))
NN_para = [
conv_W_1, conv_b_1, conv_W_2, conv_b_2, conv_W_1_q, conv_b_1_q,
conv_W_2_q, conv_b_2_q, conv_W_char, conv_b_char
]
input4score = squad_cnn_rank_word(
rng, common_input_p, common_input_q, char_common_input_p,
char_common_input_q, batch_size, p_len_limit, q_len_limit, emb_size,
char_emb_size, char_len, filter_size, char_filter_size, hidden_size,
conv_W_1, conv_b_1, conv_W_2, conv_b_2, conv_W_1_q, conv_b_1_q,
conv_W_2_q, conv_b_2_q, conv_W_char, conv_b_char, para_mask, q_mask,
char_p_masks, char_q_masks) #(batch, 4*hidden, p_len_limit)
test_input4score = squad_cnn_rank_word(
rng, common_input_p, common_input_q, char_common_input_p,
char_common_input_q, test_batch_size, test_p_len_limit, q_len_limit,
emb_size, char_emb_size, char_len, filter_size, char_filter_size,
hidden_size, conv_W_1, conv_b_1, conv_W_2, conv_b_2, conv_W_1_q,
conv_b_1_q, conv_W_2_q, conv_b_2_q, conv_W_char, conv_b_char,
para_mask, q_mask, char_p_masks,
char_q_masks) #(batch, 4*hidden, p_len_limit)
# gram_size = 5*true_p_len-(0+1+2+3+4)
HL_1_para = create_ensemble_para(rng, hidden_size,
6 * hidden_size + char_emb_size)
HL_2_para = create_ensemble_para(rng, hidden_size, hidden_size)
HL_3_para = create_ensemble_para(rng, hidden_size, hidden_size)
HL_4_para = create_ensemble_para(rng, hidden_size, hidden_size)
U_a = create_ensemble_para(rng, 1, hidden_size)
norm_U_a = normalize_matrix(U_a)
norm_HL_1_para = normalize_matrix(HL_1_para)
norm_HL_2_para = normalize_matrix(HL_2_para)
norm_HL_3_para = normalize_matrix(HL_3_para)
norm_HL_4_para = normalize_matrix(HL_4_para)
end_HL_1_para = create_ensemble_para(rng, hidden_size,
6 * hidden_size + char_emb_size)
end_HL_2_para = create_ensemble_para(rng, hidden_size, hidden_size)
end_HL_3_para = create_ensemble_para(rng, hidden_size, hidden_size)
end_HL_4_para = create_ensemble_para(rng, hidden_size, hidden_size)
end_U_a = create_ensemble_para(rng, 1, hidden_size)
end_norm_U_a = normalize_matrix(end_U_a)
end_norm_HL_1_para = normalize_matrix(end_HL_1_para)
end_norm_HL_2_para = normalize_matrix(end_HL_2_para)
end_norm_HL_3_para = normalize_matrix(end_HL_3_para)
end_norm_HL_4_para = normalize_matrix(end_HL_4_para)
span_scores_matrix = add_HLs_2_tensor3(input4score, norm_HL_1_para,
norm_HL_2_para, norm_HL_3_para,
norm_HL_4_para, norm_U_a,
batch_size, true_p_len)
span_scores = T.nnet.softmax(span_scores_matrix) #(batch, para_len)
end_span_scores_matrix = add_HLs_2_tensor3(input4score, end_norm_HL_1_para,
end_norm_HL_2_para,
end_norm_HL_3_para,
end_norm_HL_4_para,
end_norm_U_a, batch_size,
true_p_len)
end_span_scores = T.nnet.softmax(
end_span_scores_matrix) #(batch, para_len)
loss_neg_likelihood = -T.mean(
T.log(span_scores[T.arange(batch_size), gold_indices[:, 0]]))
end_loss_neg_likelihood = -T.mean(
T.log(span_scores[T.arange(batch_size), gold_indices[:, 1]]))
#ranking loss start
tanh_span_scores_matrix = span_scores #T.tanh(span_scores_matrix) #(batch, gram_size)
index_matrix = T.zeros((batch_size, p_len_limit),
dtype=theano.config.floatX)
new_index_matrix = T.set_subtensor(
index_matrix[T.arange(batch_size), gold_indices[:, 0]], 1.0)
prob_batch_posi = tanh_span_scores_matrix[new_index_matrix.nonzero()]
prob_batch_nega = tanh_span_scores_matrix[(1.0 -
new_index_matrix).nonzero()]
repeat_posi = T.extra_ops.repeat(prob_batch_posi,
prob_batch_nega.shape[0],
axis=0)
repeat_nega = T.extra_ops.repeat(prob_batch_nega.dimshuffle('x', 0),
prob_batch_posi.shape[0],
axis=0).flatten()
loss_rank = T.mean(T.maximum(0.0, margin - repeat_posi + repeat_nega))
#ranking loss END
end_tanh_span_scores_matrix = end_span_scores #T.tanh(span_scores_matrix) #(batch, gram_size)
end_index_matrix = T.zeros((batch_size, p_len_limit),
dtype=theano.config.floatX)
end_new_index_matrix = T.set_subtensor(
end_index_matrix[T.arange(batch_size), gold_indices[:, 1]], 1.0)
end_prob_batch_posi = end_tanh_span_scores_matrix[
end_new_index_matrix.nonzero()]
end_prob_batch_nega = end_tanh_span_scores_matrix[(
1.0 - end_new_index_matrix).nonzero()]
end_repeat_posi = T.extra_ops.repeat(end_prob_batch_posi,
end_prob_batch_nega.shape[0],
axis=0)
end_repeat_nega = T.extra_ops.repeat(end_prob_batch_nega.dimshuffle(
'x', 0),
end_prob_batch_posi.shape[0],
axis=0).flatten()
end_loss_rank = T.mean(
T.maximum(0.0, margin - end_repeat_posi + end_repeat_nega))
loss = loss_neg_likelihood + end_loss_neg_likelihood + loss_rank + end_loss_rank
#test
test_span_scores_matrix = add_HLs_2_tensor3(
test_input4score, norm_HL_1_para, norm_HL_2_para, norm_HL_3_para,
norm_HL_4_para, norm_U_a, true_batch_size,
true_p_len) #(batch, test_p_len)
mask_test_return = T.argmax(test_span_scores_matrix * para_mask,
axis=1) #batch
end_test_span_scores_matrix = add_HLs_2_tensor3(
test_input4score, end_norm_HL_1_para, end_norm_HL_2_para,
end_norm_HL_3_para, end_norm_HL_4_para, end_norm_U_a, true_batch_size,
true_p_len) #(batch, test_p_len)
end_mask_test_return = T.argmax(end_test_span_scores_matrix * para_mask,
axis=1) #batch
params = (
[embeddings, char_embeddings] + NN_para +
[U_a, HL_1_para, HL_2_para, HL_3_para, HL_4_para] +
[end_U_a, end_HL_1_para, end_HL_2_para, end_HL_3_para, end_HL_4_para])
L2_reg = L2norm_paraList([
embeddings, char_embeddings, conv_W_1, conv_W_2, conv_W_1_q,
conv_W_2_q, conv_W_char, U_a, HL_1_para, HL_2_para, HL_3_para,
HL_4_para
])
#L2_reg = L2norm_paraList(params)
cost = loss + L2_weight * L2_reg
accumulator = []
for para_i in params:
eps_p = numpy.zeros_like(para_i.get_value(borrow=True),
dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
# print grad_i.type
acc = acc_i + T.sqr(grad_i)
updates.append((param_i, param_i - learning_rate * grad_i /
(T.sqrt(acc) + 1e-8))) #AdaGrad
updates.append((acc_i, acc))
# updates=Adam(cost, params, lr=0.0001)
train_model = theano.function(
[
paragraph,
questions,
gold_indices,
para_mask,
q_mask,
char_paragraph, #(batch, char_len*p_len)
char_questions,
char_para_mask,
char_q_mask,
true_p_len
],
cost,
updates=updates,
on_unused_input='ignore')
test_model = theano.function([
paragraph, questions, para_mask, q_mask, char_paragraph,
char_questions, char_para_mask, char_q_mask, true_p_len
], [mask_test_return, end_mask_test_return],
on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... training'
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
best_params = None
best_validation_loss = numpy.inf
best_iter = 0
test_score = 0.
start_time = time.time()
mid_time = start_time
past_time = mid_time
epoch = 0
done_looping = False
#para_list, Q_list, label_list, mask, vocab_size=load_train()
n_train_batches = train_size / batch_size
# remain_train=train_size%batch_size
train_batch_start = list(numpy.arange(n_train_batches) *
batch_size) + [train_size - batch_size]
n_test_batches = test_size / test_batch_size
# remain_test=test_size%batch_size
test_batch_start = list(numpy.arange(n_test_batches) *
test_batch_size) + [test_size - test_batch_size]
max_F1_acc = 0.0
max_exact_acc = 0.0
cost_i = 0.0
train_ids = range(train_size)
while (epoch < n_epochs) and (not done_looping):
epoch = epoch + 1
random.Random(4).shuffle(train_ids)
iter_accu = 0
for para_id in train_batch_start:
# iter means how many batches have been runed, taking into loop
iter = (epoch - 1) * n_train_batches + iter_accu + 1
iter_accu += 1
train_id_batch = train_ids[para_id:para_id + batch_size]
cost_i += train_model(
train_para_list[train_id_batch], train_Q_list[train_id_batch],
train_label_list[train_id_batch],
train_para_mask[train_id_batch], train_Q_mask[train_id_batch],
train_para_char_list[train_id_batch],
train_Q_char_list[train_id_batch],
train_para_char_mask[train_id_batch],
train_Q_char_mask[train_id_batch], p_len_limit)
#print iter
if iter % 100 == 0:
print 'Epoch ', epoch, 'iter ' + str(
iter) + ' average cost: ' + str(cost_i / iter), 'uses ', (
time.time() - past_time) / 60.0, 'min'
print 'Testing...'
past_time = time.time()
pred_dict = {}
q_amount = 0
p1 = 0
for test_para_id in test_batch_start:
batch_predict_ids, batch_predict_end_ids = test_model(
test_para_list[test_para_id:test_para_id +
test_batch_size],
test_Q_list[test_para_id:test_para_id +
test_batch_size],
test_para_mask[test_para_id:test_para_id +
test_batch_size],
test_Q_mask[test_para_id:test_para_id +
test_batch_size],
test_para_char_list[test_para_id:test_para_id +
test_batch_size],
test_Q_char_list[test_para_id:test_para_id +
test_batch_size],
test_para_char_mask[test_para_id:test_para_id +
test_batch_size],
test_Q_char_mask[test_para_id:test_para_id +
test_batch_size], test_p_len_limit)
test_para_wordlist_batch = test_para_wordlist_list[
test_para_id:test_para_id + test_batch_size]
# test_label_batch=test_label_list[test_para_id:test_para_id+test_batch_size]
# q_amount+=test_batch_size
q_ids_batch = q_idlist[test_para_id:test_para_id +
test_batch_size]
q_amount += test_batch_size
for q in range(test_batch_size): #for each question
# pred_ans=decode_predict_id(batch_predict_ids[q], test_para_wordlist_batch[q])
start = batch_predict_ids[q]
end = batch_predict_end_ids[q]
if end < start:
start, end = end, start
pred_ans = ' '.join(
test_para_wordlist_batch[q][start:end + 1])
q_id = q_ids_batch[q]
pred_dict[q_id] = pred_ans
with codecs.open(rootPath + 'predictions.txt', 'w',
'utf-8') as outfile:
json.dump(pred_dict, outfile)
F1_acc, exact_acc = standard_eval(rootPath + 'dev-v1.1.json',
rootPath + 'predictions.txt')
if F1_acc > max_F1_acc:
max_F1_acc = F1_acc
if exact_acc > max_exact_acc:
max_exact_acc = exact_acc
# if max_exact_acc > max_EM:
# store_model_to_file(rootPath+'Best_Paras_google_'+str(max_exact_acc), params)
# print 'Finished storing best params at:', max_exact_acc
print 'current average F1:', F1_acc, '\t\tmax F1:', max_F1_acc, 'current exact:', exact_acc, '\t\tmax exact_acc:', max_exact_acc
if patience <= iter:
done_looping = True
break
print 'Epoch ', epoch, 'uses ', (time.time() - mid_time) / 60.0, 'min'
mid_time = time.time()
#print 'Batch_size: ', update_freq
end_time = time.time()
print('Optimization complete.')
print('Best validation score of %f %% obtained at iteration %i,'\
'with test performance %f %%' %
(best_validation_loss * 100., best_iter + 1, test_score * 100.))
print >> sys.stderr, ('The code for file ' + os.path.split(__file__)[1] +
' ran for %.2fm' % ((end_time - start_time) / 60.))
def evaluate_lenet5(learning_rate=0.1,
n_epochs=2000,
word_nkerns=500,
char_nkerns=100,
batch_size=1,
window_width=3,
emb_size=500,
char_emb_size=100,
hidden_size=200,
margin=0.5,
L2_weight=0.0003,
update_freq=1,
norm_threshold=5.0,
max_truncate=40,
max_char_len=40,
max_des_len=20,
max_relation_len=5,
max_Q_len=30,
train_neg_size=6,
neg_all=100,
train_size=75893,
test_size=19168,
mark='_BiasedMaxPool_lr0.1_word500_char100_noDes_ent2.0'
): #train_size=75909, test_size=17386
# maxSentLength=max_truncate+2*(window_width-1)
model_options = locals().copy()
print "model options", model_options
rootPath = '/mounts/data/proj/wenpeng/Dataset/freebase/SimpleQuestions_v2/'
triple_files = [
'annotated_fb_data_train.entitylinking.top20_succSet_asInput.txt',
'annotated_fb_data_test.entitylinking.top20_succSet_asInput.fromMo_FB5M.txt'
]
rng = numpy.random.RandomState(23455)
word2id, char2id = load_word2id_char2id(mark)
# datasets, datasets_test, length_per_example_test, vocab_size, char_size=load_test_or_valid(triple_files[0], triple_files[1], max_char_len, max_des_len, max_relation_len, max_Q_len, train_size, test_size)#max_char_len, max_des_len, max_relation_len, max_Q_len
datasets_test, length_per_example_test, word2id, char2id = load_test_or_valid(
triple_files[1], char2id, word2id, max_char_len, max_des_len,
max_relation_len, max_Q_len, test_size)
vocab_size = len(word2id)
char_size = len(char2id)
print 'vocab_size:', vocab_size, 'char_size:', char_size
# train_data=datasets
# valid_data=datasets[1]
test_data = datasets_test
# result=(pos_entity_char, pos_entity_des, relations, entity_char_lengths, entity_des_lengths, relation_lengths, mention_char_ids, remainQ_word_ids, mention_char_lens, remainQ_word_lens, entity_scores)
#
# train_pos_entity_char=train_data[0]
# train_pos_entity_des=train_data[1]
# train_relations=train_data[2]
# train_entity_char_lengths=train_data[3]
# train_entity_des_lengths=train_data[4]
# train_relation_lengths=train_data[5]
# train_mention_char_ids=train_data[6]
# train_remainQ_word_ids=train_data[7]
# train_mention_char_lens=train_data[8]
# train_remainQ_word_len=train_data[9]
# train_entity_scores=train_data[10]
test_pos_entity_char = test_data[0]
# test_pos_entity_des=test_data[1]
test_relations = test_data[2]
test_entity_char_lengths = test_data[3]
# test_entity_des_lengths=test_data[4]
test_relation_lengths = test_data[5]
test_mention_char_ids = test_data[6]
test_remainQ_word_ids = test_data[7]
test_mention_char_lens = test_data[8]
test_remainQ_word_len = test_data[9]
test_entity_scores = test_data[10]
#
# test_pos_entity_char=test_data[0] #matrix, each row for line example, all head and tail entity, iteratively: 40*2*51
# test_pos_entity_des=test_data[1] #matrix, each row for a examle: 20*2*51
# test_relations=test_data[2] #matrix, each row for a example: 5*51
# test_entity_char_lengths=test_data[3] #matrix, each row for a example: 3*2*51 (three valies for one entity)
# test_entity_des_lengths=test_data[4] #matrix, each row for a example: 3*2*51 (three values for one entity)
# test_relation_lengths=test_data[5] #matrix, each row for a example: 3*51
# test_mention_char_ids=test_data[6] #matrix, each row for a mention: 40
# test_remainQ_word_ids=test_data[7] #matrix, each row for a question: 30
# test_mention_char_lens=test_data[8] #matrix, each three values for a mention: 3
# test_remainQ_word_len=test_data[9] #matrix, each three values for a remain question: 3
# train_sizes=[len(train_pos_entity_char), len(train_pos_entity_des), len(train_relations), len(train_entity_char_lengths), len(train_entity_des_lengths),\
# len(train_relation_lengths), len(train_mention_char_ids), len(train_remainQ_word_ids), len(train_mention_char_lens), len(train_remainQ_word_len), len(train_entity_scores)]
# if sum(train_sizes)/len(train_sizes)!=train_size:
# print 'weird size:', train_sizes
# exit(0)
test_sizes=[len(test_pos_entity_char), len(test_relations), len(test_entity_char_lengths),\
len(test_relation_lengths), len(test_mention_char_ids), len(test_remainQ_word_ids), len(test_mention_char_lens), len(test_remainQ_word_len), len(test_entity_scores)]
if sum(test_sizes) / len(test_sizes) != test_size:
print 'weird size:', test_sizes
exit(0)
# n_train_batches=train_size/batch_size
# n_test_batches=test_size/batch_size
# train_batch_start=list(numpy.arange(n_train_batches)*batch_size)
# test_batch_start=list(numpy.arange(n_test_batches)*batch_size)
# indices_train_pos_entity_char=pythonList_into_theanoIntMatrix(train_pos_entity_char)
# indices_train_pos_entity_des=pythonList_into_theanoIntMatrix(train_pos_entity_des)
# indices_train_relations=pythonList_into_theanoIntMatrix(train_relations)
# indices_train_entity_char_lengths=pythonList_into_theanoIntMatrix(train_entity_char_lengths)
# indices_train_entity_des_lengths=pythonList_into_theanoIntMatrix(train_entity_des_lengths)
# indices_train_relation_lengths=pythonList_into_theanoIntMatrix(train_relation_lengths)
# indices_train_mention_char_ids=pythonList_into_theanoIntMatrix(train_mention_char_ids)
# indices_train_remainQ_word_ids=pythonList_into_theanoIntMatrix(train_remainQ_word_ids)
# indices_train_mention_char_lens=pythonList_into_theanoIntMatrix(train_mention_char_lens)
# indices_train_remainQ_word_len=pythonList_into_theanoIntMatrix(train_remainQ_word_len)
# indices_train_entity_scores=pythonList_into_theanoFloatMatrix(train_entity_scores)
# indices_test_pos_entity_char=pythonList_into_theanoIntMatrix(test_pos_entity_char)
# indices_test_pos_entity_des=pythonList_into_theanoIntMatrix(test_pos_entity_des)
# indices_test_relations=pythonList_into_theanoIntMatrix(test_relations)
# indices_test_entity_char_lengths=pythonList_into_theanoIntMatrix(test_entity_char_lengths)
# indices_test_entity_des_lengths=pythonList_into_theanoIntMatrix(test_entity_des_lengths)
# indices_test_relation_lengths=pythonList_into_theanoIntMatrix(test_relation_lengths)
# indices_test_mention_char_ids=pythonList_into_theanoIntMatrix(test_mention_char_ids)
# indices_test_remainQ_word_ids=pythonList_into_theanoIntMatrix(test_remainQ_word_ids)
# indices_test_mention_char_lens=pythonList_into_theanoIntMatrix(test_mention_char_lens)
# indices_test_remainQ_word_len=pythonList_into_theanoIntMatrix(test_remainQ_word_len)
# indices_test_entity_scores=pythonList_into_theanoIntMatrix(test_entity_scores)
rand_values = random_value_normal((vocab_size + 1, emb_size),
theano.config.floatX,
numpy.random.RandomState(1234))
# rand_values[0]=numpy.array(numpy.zeros(emb_size),dtype=theano.config.floatX)
#rand_values[0]=numpy.array([1e-50]*emb_size)
# rand_values=load_word2vec_to_init(rand_values, rootPath+'word_emb.txt')
embeddings = theano.shared(value=rand_values, borrow=True)
char_rand_values = random_value_normal((char_size + 1, char_emb_size),
theano.config.floatX,
numpy.random.RandomState(1234))
# char_rand_values[0]=numpy.array(numpy.zeros(char_emb_size),dtype=theano.config.floatX)
char_embeddings = theano.shared(value=char_rand_values, borrow=True)
# allocate symbolic variables for the data
index = T.iscalar()
chosed_indices = T.ivector()
ent_char_ids_M = T.imatrix()
ent_lens_M = T.imatrix()
men_char_ids_M = T.imatrix()
men_lens_M = T.imatrix()
rel_word_ids_M = T.imatrix()
rel_word_lens_M = T.imatrix()
#desH_word_ids_M=T.imatrix()
#desH_word_lens_M=T.imatrix()
q_word_ids_M = T.imatrix()
q_word_lens_M = T.imatrix()
ent_scores = T.fvector()
filter_size = (emb_size, window_width)
char_filter_size = (char_emb_size, window_width)
#poolsize1=(1, ishape[1]-filter_size[1]+1) #?????????????????????????????
# length_after_wideConv=ishape[1]+filter_size[1]-1
######################
# BUILD ACTUAL MODEL #
######################
print '... building the model'
char_filter_shape = (char_nkerns, 1, char_filter_size[0],
char_filter_size[1])
word_filter_shape = (word_nkerns, 1, filter_size[0], filter_size[1])
char_conv_W, char_conv_b = create_conv_para(rng,
filter_shape=char_filter_shape)
q_rel_conv_W, q_rel_conv_b = create_conv_para(
rng, filter_shape=word_filter_shape)
#q_desH_conv_W, q_desH_conv_b=create_conv_para(rng, filter_shape=word_filter_shape)
params = [
char_embeddings, embeddings, char_conv_W, char_conv_b, q_rel_conv_W,
q_rel_conv_b
] #, q_desH_conv_W, q_desH_conv_b]
load_model_from_file(rootPath, params, mark)
def SimpleQ_matches_Triple(ent_char_ids_f, ent_lens_f, rel_word_ids_f,
rel_word_lens_f, men_char_ids_f, q_word_ids_f,
men_lens_f, q_word_lens_f):
# rng = numpy.random.RandomState(23455)
ent_char_input = char_embeddings[ent_char_ids_f.flatten()].reshape(
(batch_size, max_char_len,
char_emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
men_char_input = char_embeddings[men_char_ids_f.flatten()].reshape(
(batch_size, max_char_len,
char_emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
rel_word_input = embeddings[rel_word_ids_f.flatten()].reshape(
(batch_size, max_relation_len,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
#desH_word_input = embeddings[desH_word_ids_f.flatten()].reshape((batch_size,max_des_len, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
# desT_word_input = embeddings[desT_word_ids_f.flatten()].reshape((batch_size,max_des_len, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
q_word_input = embeddings[q_word_ids_f.flatten()].reshape(
(batch_size, max_Q_len,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
#ent_mention
ent_char_conv = Conv_with_input_para(rng,
input=ent_char_input,
image_shape=(batch_size, 1,
char_emb_size,
max_char_len),
filter_shape=char_filter_shape,
W=char_conv_W,
b=char_conv_b)
men_char_conv = Conv_with_input_para(rng,
input=men_char_input,
image_shape=(batch_size, 1,
char_emb_size,
max_char_len),
filter_shape=char_filter_shape,
W=char_conv_W,
b=char_conv_b)
#q-rel
q_rel_conv = Conv_with_input_para(rng,
input=q_word_input,
image_shape=(batch_size, 1, emb_size,
max_Q_len),
filter_shape=word_filter_shape,
W=q_rel_conv_W,
b=q_rel_conv_b)
rel_conv = Conv_with_input_para(rng,
input=rel_word_input,
image_shape=(batch_size, 1, emb_size,
max_relation_len),
filter_shape=word_filter_shape,
W=q_rel_conv_W,
b=q_rel_conv_b)
#q_desH
#q_desH_conv = Conv_with_input_para(rng, input=q_word_input,
# image_shape=(batch_size, 1, emb_size, max_Q_len),
# filter_shape=word_filter_shape, W=q_desH_conv_W, b=q_desH_conv_b)
#desH_conv = Conv_with_input_para(rng, input=desH_word_input,
# image_shape=(batch_size, 1, emb_size, max_des_len),
# filter_shape=word_filter_shape, W=q_desH_conv_W, b=q_desH_conv_b)
ent_conv_pool = Max_Pooling(rng,
input_l=ent_char_conv.output,
left_l=ent_lens_f[0],
right_l=ent_lens_f[2])
men_conv_pool = Max_Pooling(rng,
input_l=men_char_conv.output,
left_l=men_lens_f[0],
right_l=men_lens_f[2])
#q_rel_pool=Max_Pooling(rng, input_l=q_rel_conv.output, left_l=q_word_lens_f[0], right_l=q_word_lens_f[2])
rel_conv_pool = Max_Pooling(rng,
input_l=rel_conv.output,
left_l=rel_word_lens_f[0],
right_l=rel_word_lens_f[2])
q_rel_pool = Average_Pooling_for_SimpleQA(
rng,
input_l=q_rel_conv.output,
input_r=rel_conv_pool.output_maxpooling,
left_l=q_word_lens_f[0],
right_l=q_word_lens_f[2],
length_l=q_word_lens_f[1] + filter_size[1] - 1,
dim=max_Q_len + filter_size[1] - 1,
topk=2)
#q_desH_pool=Max_Pooling(rng, input_l=q_desH_conv.output, left_l=q_word_lens_f[0], right_l=q_word_lens_f[2])
#desH_conv_pool=Max_Pooling(rng, input_l=desH_conv.output, left_l=desH_word_lens_f[0], right_l=desH_word_lens_f[2])
overall_simi=cosine(ent_conv_pool.output_maxpooling, men_conv_pool.output_maxpooling)*0.33333+\
cosine(q_rel_pool.output_maxpooling, rel_conv_pool.output_maxpooling)*0.55
# 0.0*cosine(q_desH_pool.output_maxpooling, desH_conv_pool.output_maxpooling)
# cosine(q_desT_pool.output_maxpooling, desT_conv_pool.output_maxpooling)
return overall_simi
simi_list, updates = theano.scan(SimpleQ_matches_Triple,
sequences=[
ent_char_ids_M, ent_lens_M,
rel_word_ids_M, rel_word_lens_M,
men_char_ids_M, q_word_ids_M,
men_lens_M, q_word_lens_M
])
simi_list += 0.2 * ent_scores
posi_simi = simi_list[0]
nega_simies = simi_list[1:]
loss_simi_list = T.maximum(
0.0, margin - posi_simi.reshape((1, 1)) + nega_simies)
loss_simi = T.sum(loss_simi_list)
test_model = theano.function([
ent_char_ids_M, ent_lens_M, men_char_ids_M, men_lens_M, rel_word_ids_M,
rel_word_lens_M, q_word_ids_M, q_word_lens_M, ent_scores
], [loss_simi, simi_list],
on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
print '... testing'
start_time = time.clock()
mid_time = start_time
epoch = 0
test_loss = []
succ = 0
for i in range(test_size):
#prepare data
test_ent_char_ids_M = numpy.asarray(test_pos_entity_char[i],
dtype='int32').reshape(
(length_per_example_test[i],
max_char_len))
test_ent_lens_M = numpy.asarray(test_entity_char_lengths[i],
dtype='int32').reshape(
(length_per_example_test[i], 3))
test_men_char_ids_M = numpy.asarray(test_mention_char_ids[i],
dtype='int32').reshape(
(length_per_example_test[i],
max_char_len))
test_men_lens_M = numpy.asarray(test_mention_char_lens[i],
dtype='int32').reshape(
(length_per_example_test[i], 3))
test_rel_word_ids_M = numpy.asarray(test_relations[i],
dtype='int32').reshape(
(length_per_example_test[i],
max_relation_len))
test_rel_word_lens_M = numpy.asarray(test_relation_lengths[i],
dtype='int32').reshape(
(length_per_example_test[i],
3))
#test_desH_word_ids_M =numpy.asarray( test_pos_entity_des[i], dtype='int32').reshape((length_per_example_test[i], max_des_len))
#test_desH_word_lens_M = numpy.asarray(test_entity_des_lengths[i], dtype='int32').reshape((length_per_example_test[i], 3))
test_q_word_ids_M = numpy.asarray(test_remainQ_word_ids[i],
dtype='int32').reshape(
(length_per_example_test[i],
max_Q_len))
test_q_word_lens_M = numpy.asarray(test_remainQ_word_len[i],
dtype='int32').reshape(
(length_per_example_test[i], 3))
test_ent_scores = numpy.asarray(test_entity_scores[i],
dtype=theano.config.floatX)
loss_simi_i, simi_list_i = test_model(
test_ent_char_ids_M, test_ent_lens_M, test_men_char_ids_M,
test_men_lens_M, test_rel_word_ids_M, test_rel_word_lens_M,
test_q_word_ids_M, test_q_word_lens_M, test_ent_scores)
# print 'simi_list_i:', simi_list_i[:10]
test_loss.append(loss_simi_i)
if len(simi_list_i) == 1 or simi_list_i[0] >= max(simi_list_i[1:]):
succ += 1
if i % 1000 == 0:
print 'testing', i, '...acc:', (succ * 1.0 /
(i + 1)) * (19168 * 1.0 / 21687)
succ = succ * 100.0 / 21687
#now, check MAP and MRR
print 'accu:', succ
# store_model_to_file(rootPath, params, succ, mark)
print 'Epoch ', epoch, 'uses ', (time.clock() - mid_time) / 60.0, 'min'
def evaluate_lenet5(file_name,
input_filename,
model_filename,
learning_rate=0.001,
n_epochs=2000,
nkerns=[90, 90],
batch_size=1,
window_width=2,
maxSentLength=64,
maxDocLength=60,
emb_size=50,
hidden_size=200,
L2_weight=0.0065,
update_freq=1,
norm_threshold=5.0,
max_s_length=128,
max_d_length=128,
margin=0.3):
maxSentLength = max_s_length + 2 * (window_width - 1)
maxDocLength = max_d_length + 2 * (window_width - 1)
model_options = locals().copy()
f = open(file_name, 'w')
f.write("model options " + str(model_options) + '\n')
#rootPath='/mounts/data/proj/wenpeng/Dataset/MCTest/';
rng = numpy.random.RandomState(23455)
train_data, _train_Label, train_size, test_data, _test_Label, test_size, vocab_size = load_MCTest_corpus_DPN(
'vocab_table_wenyan.txt', input_filename, input_filename, max_s_length,
maxSentLength, maxDocLength) #vocab_size contain train, dev and test
f.write('train_size : ' + str(train_size))
#datasets_nonoverlap, vocab_size_nonoverlap=load_SICK_corpus(rootPath+'vocab_nonoverlap_train_plus_dev.txt', rootPath+'train_plus_dev_removed_overlap_as_training.txt', rootPath+'test_removed_overlap_as_training.txt', max_truncate_nonoverlap,maxSentLength_nonoverlap, entailment=True)
#datasets, vocab_size=load_wikiQA_corpus(rootPath+'vocab_lower_in_word2vec.txt', rootPath+'WikiQA-train.txt', rootPath+'test_filtered.txt', maxSentLength)#vocab_size contain train, dev and test
#mtPath='/mounts/data/proj/wenpeng/Dataset/WikiQACorpus/MT/BLEU_NIST/'
# mt_train, mt_test=load_mts_wikiQA(rootPath+'Train_plus_dev_MT/concate_14mt_train.txt', rootPath+'Test_MT/concate_14mt_test.txt')
# extra_train, extra_test=load_extra_features(rootPath+'train_plus_dev_rule_features_cosine_eucli_negation_len1_len2_syn_hyper1_hyper2_anto(newsimi0.4).txt', rootPath+'test_rule_features_cosine_eucli_negation_len1_len2_syn_hyper1_hyper2_anto(newsimi0.4).txt')
# discri_train, discri_test=load_extra_features(rootPath+'train_plus_dev_discri_features_0.3.txt', rootPath+'test_discri_features_0.3.txt')
#wm_train, wm_test=load_wmf_wikiQA(rootPath+'train_word_matching_scores.txt', rootPath+'test_word_matching_scores.txt')
#wm_train, wm_test=load_wmf_wikiQA(rootPath+'train_word_matching_scores_normalized.txt', rootPath+'test_word_matching_scores_normalized.txt')
# results=[numpy.array(data_D), numpy.array(data_Q), numpy.array(data_A1), numpy.array(data_A2), numpy.array(data_A3), numpy.array(data_A4), numpy.array(Label),
# numpy.array(Length_D),numpy.array(Length_D_s), numpy.array(Length_Q), numpy.array(Length_A1), numpy.array(Length_A2), numpy.array(Length_A3), numpy.array(Length_A4),
# numpy.array(leftPad_D),numpy.array(leftPad_D_s), numpy.array(leftPad_Q), numpy.array(leftPad_A1), numpy.array(leftPad_A2), numpy.array(leftPad_A3), numpy.array(leftPad_A4),
# numpy.array(rightPad_D),numpy.array(rightPad_D_s), numpy.array(rightPad_Q), numpy.array(rightPad_A1), numpy.array(rightPad_A2), numpy.array(rightPad_A3), numpy.array(rightPad_A4)]
# return results, line_control
[
train_data_D, train_data_A1, train_Label, train_Length_D,
train_Length_D_s, train_Length_A1, train_leftPad_D, train_leftPad_D_s,
train_leftPad_A1, train_rightPad_D, train_rightPad_D_s,
train_rightPad_A1
] = train_data
[
test_data_D, test_data_A1, test_Label, test_Length_D, test_Length_D_s,
test_Length_A1, test_leftPad_D, test_leftPad_D_s, test_leftPad_A1,
test_rightPad_D, test_rightPad_D_s, test_rightPad_A1
] = test_data
n_train_batches = train_size / batch_size
n_test_batches = test_size / batch_size
train_batch_start = list(numpy.arange(n_train_batches) * batch_size)
test_batch_start = list(numpy.arange(n_test_batches) * batch_size)
# indices_train_l=theano.shared(numpy.asarray(indices_train_l, dtype=theano.config.floatX), borrow=True)
# indices_train_r=theano.shared(numpy.asarray(indices_train_r, dtype=theano.config.floatX), borrow=True)
# indices_test_l=theano.shared(numpy.asarray(indices_test_l, dtype=theano.config.floatX), borrow=True)
# indices_test_r=theano.shared(numpy.asarray(indices_test_r, dtype=theano.config.floatX), borrow=True)
# indices_train_l=T.cast(indices_train_l, 'int64')
# indices_train_r=T.cast(indices_train_r, 'int64')
# indices_test_l=T.cast(indices_test_l, 'int64')
# indices_test_r=T.cast(indices_test_r, 'int64')
rand_values = random_value_normal((vocab_size + 1, emb_size),
theano.config.floatX,
numpy.random.RandomState(1234))
rand_values[0] = numpy.array(numpy.zeros(emb_size),
dtype=theano.config.floatX)
#rand_values[0]=numpy.array([1e-50]*emb_size)
rand_values = load_word2vec_to_init(rand_values, 'vectors_wenyan2.txt')
#rand_values=load_word2vec_to_init(rand_values, rootPath+'vocab_lower_in_word2vec_embs_300d.txt')
embeddings = theano.shared(value=rand_values, borrow=True)
error_sum = 0
# allocate symbolic variables for the data
index = T.lscalar()
index_D = T.lmatrix() # now, x is the index matrix, must be integer
# index_Q = T.lvector()
index_A1 = T.lvector()
# index_A2= T.lvector()
# index_A3= T.lvector()
# index_A4= T.lvector()
y = T.lscalar()
len_D = T.lscalar()
len_D_s = T.lvector()
# len_Q=T.lscalar()
len_A1 = T.lscalar()
# len_A2=T.lscalar()
# len_A3=T.lscalar()
# len_A4=T.lscalar()
left_D = T.lscalar()
left_D_s = T.lvector()
# left_Q=T.lscalar()
left_A1 = T.lscalar()
# left_A2=T.lscalar()
# left_A3=T.lscalar()
# left_A4=T.lscalar()
right_D = T.lscalar()
right_D_s = T.lvector()
# right_Q=T.lscalar()
right_A1 = T.lscalar()
# right_A2=T.lscalar()
# right_A3=T.lscalar()
# right_A4=T.lscalar()
#x=embeddings[x_index.flatten()].reshape(((batch_size*4),maxSentLength, emb_size)).transpose(0, 2, 1).flatten()
ishape = (emb_size, maxSentLength) # sentence shape
dshape = (nkerns[0], maxDocLength) # doc shape
filter_words = (emb_size, window_width)
filter_sents = (nkerns[0], window_width)
#poolsize1=(1, ishape[1]-filter_size[1]+1) #?????????????????????????????
# length_after_wideConv=ishape[1]+filter_size[1]-1
######################
# BUILD ACTUAL MODEL #
######################
f.write('... building the model\n')
# Reshape matrix of rasterized images of shape (batch_size,28*28)
# to a 4D tensor, compatible with our LeNetConvPoolLayer
#layer0_input = x.reshape(((batch_size*4), 1, ishape[0], ishape[1]))
layer0_D_input = embeddings[index_D.flatten()].reshape(
(maxDocLength, maxSentLength,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
layer0_A1_input = embeddings[index_A1.flatten()].reshape(
(batch_size, maxSentLength,
emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
#layer0_A2_input = embeddings[index_A2.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
# layer0_A3_input = embeddings[index_A3.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
# layer0_A4_input = embeddings[index_A4.flatten()].reshape((batch_size,maxSentLength, emb_size)).transpose(0, 2, 1).dimshuffle(0, 'x', 1, 2)
conv_W, conv_b = create_conv_para(rng,
filter_shape=(nkerns[0], 1,
filter_words[0],
filter_words[1]))
layer0_para = [conv_W, conv_b]
conv2_W, conv2_b = create_conv_para(rng,
filter_shape=(nkerns[1], 1, nkerns[0],
filter_sents[1]))
layer2_para = [conv2_W, conv2_b]
high_W, high_b = create_highw_para(
rng, nkerns[0], nkerns[1]
) # this part decides nkern[0] and nkern[1] must be in the same dimension
highW_para = [high_W, high_b]
params = layer2_para + layer0_para + highW_para #+[embeddings]
#load_model(params)
layer0_D = Conv_with_input_para(
rng,
input=layer0_D_input,
image_shape=(maxDocLength, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]),
W=conv_W,
b=conv_b)
# layer0_Q = Conv_with_input_para(rng, input=layer0_Q_input,
# image_shape=(batch_size, 1, ishape[0], ishape[1]),
# filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]), W=conv_W, b=conv_b)
layer0_A1 = Conv_with_input_para(
rng,
input=layer0_A1_input,
image_shape=(batch_size, 1, ishape[0], ishape[1]),
filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]),
W=conv_W,
b=conv_b)
#layer0_A2 = Conv_with_input_para(rng, input=layer0_A2_input,
# image_shape=(batch_size, 1, ishape[0], ishape[1]),
# filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]), W=conv_W, b=conv_b)
# layer0_A3 = Conv_with_input_para(rng, input=layer0_A3_input,
# image_shape=(batch_size, 1, ishape[0], ishape[1]),
# filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]), W=conv_W, b=conv_b)
# layer0_A4 = Conv_with_input_para(rng, input=layer0_A4_input,
# image_shape=(batch_size, 1, ishape[0], ishape[1]),
# filter_shape=(nkerns[0], 1, filter_words[0], filter_words[1]), W=conv_W, b=conv_b)
layer0_D_output = debug_print(layer0_D.output, 'layer0_D.output')
# layer0_Q_output=debug_print(layer0_Q.output, 'layer0_Q.output')
layer0_A1_output = debug_print(layer0_A1.output, 'layer0_A1.output')
#layer0_A2_output=debug_print(layer0_A2.output, 'layer0_A2.output')
# layer0_A3_output=debug_print(layer0_A3.output, 'layer0_A3.output')
# layer0_A4_output=debug_print(layer0_A4.output, 'layer0_A4.output')
# layer1_DQ=Average_Pooling_Scan(rng, input_D=layer0_D_output, input_r=layer0_Q_output, kern=nkerns[0],
# left_D=left_D, right_D=right_D,
# left_D_s=left_D_s, right_D_s=right_D_s, left_r=left_Q, right_r=right_Q,
# length_D_s=len_D_s+filter_words[1]-1, length_r=len_Q+filter_words[1]-1,
# dim=maxSentLength+filter_words[1]-1, doc_len=maxDocLength, topk=3)
layer1_DA1 = Average_Pooling_Scan(rng,
input_D=layer0_D_output,
input_r=layer0_A1_output,
kern=nkerns[0],
left_D=left_D,
right_D=right_D,
left_D_s=left_D_s,
right_D_s=right_D_s,
left_r=left_A1,
right_r=right_A1,
length_D_s=len_D_s + filter_words[1] - 1,
length_r=len_A1 + filter_words[1] - 1,
dim=maxSentLength + filter_words[1] - 1,
doc_len=maxDocLength,
topk=1)
#layer1_DA2=Average_Pooling_Scan(rng, input_D=layer0_D_output, input_r=layer0_A2_output, kern=nkerns[0],
# left_D=left_D, right_D=right_D,
# left_D_s=left_D_s, right_D_s=right_D_s, left_r=left_A2, right_r=right_A2,
# length_D_s=len_D_s+filter_words[1]-1, length_r=len_A2+filter_words[1]-1,
# dim=maxSentLength+filter_words[1]-1, doc_len=maxDocLength, topk=3)
# layer1_DA3=Average_Pooling_Scan(rng, input_D=layer0_D_output, input_r=layer0_A3_output, kern=nkerns[0],
# left_D=left_D, right_D=right_D,
# left_D_s=left_D_s, right_D_s=right_D_s, left_r=left_A3, right_r=right_A3,
# length_D_s=len_D_s+filter_words[1]-1, length_r=len_A3+filter_words[1]-1,
# dim=maxSentLength+filter_words[1]-1, doc_len=maxDocLength, topk=3)
# layer1_DA4=Average_Pooling_Scan(rng, input_D=layer0_D_output, input_r=layer0_A4_output, kern=nkerns[0],
# left_D=left_D, right_D=right_D,
# left_D_s=left_D_s, right_D_s=right_D_s, left_r=left_A4, right_r=right_A4,
# length_D_s=len_D_s+filter_words[1]-1, length_r=len_A4+filter_words[1]-1,
# dim=maxSentLength+filter_words[1]-1, doc_len=maxDocLength, topk=3)
#load_model_for_conv2([conv2_W, conv2_b])#this can not be used, as the nkerns[0]!=filter_size[0]
#conv from sentence to doc
# layer2_DQ = Conv_with_input_para(rng, input=layer1_DQ.output_D.reshape((batch_size, 1, nkerns[0], dshape[1])),
# image_shape=(batch_size, 1, nkerns[0], dshape[1]),
# filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
layer2_DA1 = Conv_with_input_para(
rng,
input=layer1_DA1.output_D.reshape(
(batch_size, 1, nkerns[0], dshape[1])),
image_shape=(batch_size, 1, nkerns[0], dshape[1]),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]),
W=conv2_W,
b=conv2_b)
#layer2_DA2 = Conv_with_input_para(rng, input=layer1_DA2.output_D.reshape((batch_size, 1, nkerns[0], dshape[1])),
# image_shape=(batch_size, 1, nkerns[0], dshape[1]),
# filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
# layer2_DA3 = Conv_with_input_para(rng, input=layer1_DA3.output_D.reshape((batch_size, 1, nkerns[0], dshape[1])),
# image_shape=(batch_size, 1, nkerns[0], dshape[1]),
# filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
# layer2_DA4 = Conv_with_input_para(rng, input=layer1_DA4.output_D.reshape((batch_size, 1, nkerns[0], dshape[1])),
# image_shape=(batch_size, 1, nkerns[0], dshape[1]),
# filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
#conv single Q and A into doc level with same conv weights
# layer2_Q = Conv_with_input_para_one_col_featuremap(rng, input=layer1_DQ.output_QA_sent_level_rep.reshape((batch_size, 1, nkerns[0], 1)),
# image_shape=(batch_size, 1, nkerns[0], 1),
# filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
layer2_A1 = Conv_with_input_para_one_col_featuremap(
rng,
input=layer1_DA1.output_QA_sent_level_rep.reshape(
(batch_size, 1, nkerns[0], 1)),
image_shape=(batch_size, 1, nkerns[0], 1),
filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]),
W=conv2_W,
b=conv2_b)
#layer2_A2 = Conv_with_input_para_one_col_featuremap(rng, input=layer1_DA2.output_QA_sent_level_rep.reshape((batch_size, 1, nkerns[0], 1)),
# image_shape=(batch_size, 1, nkerns[0], 1),
# filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
# layer2_A3 = Conv_with_input_para_one_col_featuremap(rng, input=layer1_DA3.output_QA_sent_level_rep.reshape((batch_size, 1, nkerns[0], 1)),
# image_shape=(batch_size, 1, nkerns[0], 1),
# filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
# layer2_A4 = Conv_with_input_para_one_col_featuremap(rng, input=layer1_DA4.output_QA_sent_level_rep.reshape((batch_size, 1, nkerns[0], 1)),
# image_shape=(batch_size, 1, nkerns[0], 1),
# filter_shape=(nkerns[1], 1, nkerns[0], filter_sents[1]), W=conv2_W, b=conv2_b)
# layer2_Q_output_sent_rep_Dlevel=debug_print(layer2_Q.output_sent_rep_Dlevel, 'layer2_Q.output_sent_rep_Dlevel')
layer2_A1_output_sent_rep_Dlevel = debug_print(
layer2_A1.output_sent_rep_Dlevel, 'layer2_A1.output_sent_rep_Dlevel')
# layer2_A2_output_sent_rep_Dlevel=debug_print(layer2_A2.output_sent_rep_Dlevel, 'layer2_A2.output_sent_rep_Dlevel')
# layer2_A3_output_sent_rep_Dlevel=debug_print(layer2_A3.output_sent_rep_Dlevel, 'layer2_A3.output_sent_rep_Dlevel')
# layer2_A4_output_sent_rep_Dlevel=debug_print(layer2_A4.output_sent_rep_Dlevel, 'layer2_A4.output_sent_rep_Dlevel')
# layer3_DQ=Average_Pooling_for_Top(rng, input_l=layer2_DQ.output, input_r=layer2_Q_output_sent_rep_Dlevel, kern=nkerns[1],
# left_l=left_D, right_l=right_D, left_r=0, right_r=0,
# length_l=len_D+filter_sents[1]-1, length_r=1,
# dim=maxDocLength+filter_sents[1]-1, topk=3)
layer3_DA1 = Average_Pooling_for_Top(
rng,
input_l=layer2_DA1.output,
input_r=layer2_A1_output_sent_rep_Dlevel,
kern=nkerns[1],
left_l=left_D,
right_l=right_D,
left_r=0,
right_r=0,
length_l=len_D + filter_sents[1] - 1,
length_r=1,
dim=maxDocLength + filter_sents[1] - 1,
topk=1)
#layer3_DA2=Average_Pooling_for_Top(rng, input_l=layer2_DA2.output, input_r=layer2_A2_output_sent_rep_Dlevel, kern=nkerns[1],
# left_l=left_D, right_l=right_D, left_r=0, right_r=0,
# length_l=len_D+filter_sents[1]-1, length_r=1,
# dim=maxDocLength+filter_sents[1]-1, topk=3)
# layer3_DA3=Average_Pooling_for_Top(rng, input_l=layer2_DA3.output, input_r=layer2_A3_output_sent_rep_Dlevel, kern=nkerns[1],
# left_l=left_D, right_l=right_D, left_r=0, right_r=0,
# length_l=len_D+filter_sents[1]-1, length_r=1,
# dim=maxDocLength+filter_sents[1]-1, topk=3)
# layer3_DA4=Average_Pooling_for_Top(rng, input_l=layer2_DA4.output, input_r=layer2_A4_output_sent_rep_Dlevel, kern=nkerns[1],
# left_l=left_D, right_l=right_D, left_r=0, right_r=0,
# length_l=len_D+filter_sents[1]-1, length_r=1,
# dim=maxDocLength+filter_sents[1]-1, topk=3)
#high-way
# transform_gate_DQ=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DQ.output_D_sent_level_rep) + high_b), 'transform_gate_DQ')
transform_gate_DA1 = debug_print(
T.nnet.sigmoid(
T.dot(high_W, layer1_DA1.output_D_sent_level_rep) + high_b),
'transform_gate_DA1')
transform_gate_A1 = debug_print(
T.nnet.sigmoid(
T.dot(high_W, layer1_DA1.output_QA_sent_level_rep) + high_b),
'transform_gate_A1')
# transform_gate_A2=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DA2.output_QA_sent_level_rep) + high_b), 'transform_gate_A2')
# transform_gate_A3=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DA3.output_QA_sent_level_rep) + high_b), 'transform_gate_A3')
# transform_gate_A4=debug_print(T.nnet.sigmoid(T.dot(high_W, layer1_DA4.output_QA_sent_level_rep) + high_b), 'transform_gate_A4')
# overall_D_Q=debug_print((1.0-transform_gate_DQ)*layer1_DQ.output_D_sent_level_rep+transform_gate_DQ*layer3_DQ.output_D_doc_level_rep, 'overall_D_Q')
overall_D_A1 = (
1.0 - transform_gate_DA1
) * layer1_DA1.output_D_sent_level_rep + transform_gate_DA1 * layer3_DA1.output_D_doc_level_rep
# overall_D_A2=(1.0-transform_gate_DA2)*layer1_DA2.output_D_sent_level_rep+transform_gate_DA2*layer3_DA2.output_D_doc_level_rep
# overall_D_A3=(1.0-transform_gate_DA3)*layer1_DA3.output_D_sent_level_rep+transform_gate_DA3*layer3_DA3.output_D_doc_level_rep
# overall_D_A4=(1.0-transform_gate_DA4)*layer1_DA4.output_D_sent_level_rep+transform_gate_DA4*layer3_DA4.output_D_doc_level_rep
# overall_Q=(1.0-transform_gate_Q)*layer1_DQ.output_QA_sent_level_rep+transform_gate_Q*layer2_Q.output_sent_rep_Dlevel
overall_A1 = (
1.0 - transform_gate_A1
) * layer1_DA1.output_QA_sent_level_rep + transform_gate_A1 * layer2_A1.output_sent_rep_Dlevel
#overall_A2=(1.0-transform_gate_A2)*layer1_DA2.output_QA_sent_level_rep+transform_gate_A2*layer2_A2.output_sent_rep_Dlevel
# overall_A3=(1.0-transform_gate_A3)*layer1_DA3.output_QA_sent_level_rep+transform_gate_A3*layer2_A3.output_sent_rep_Dlevel
# overall_A4=(1.0-transform_gate_A4)*layer1_DA4.output_QA_sent_level_rep+transform_gate_A4*layer2_A4.output_sent_rep_Dlevel
simi_sent_level1 = debug_print(
cosine(layer1_DA1.output_D_sent_level_rep,
layer1_DA1.output_QA_sent_level_rep), 'simi_sent_level1')
#simi_sent_level2=debug_print(cosine(layer1_DA2.output_D_sent_level_rep, layer1_DA2.output_QA_sent_level_rep), 'simi_sent_level2')
# simi_sent_level3=debug_print(cosine(layer1_DA3.output_D_sent_level_rep, layer1_DA3.output_QA_sent_level_rep), 'simi_sent_level3')
# simi_sent_level4=debug_print(cosine(layer1_DA4.output_D_sent_level_rep, layer1_DA4.output_QA_sent_level_rep), 'simi_sent_level4')
simi_doc_level1 = debug_print(
cosine(layer3_DA1.output_D_doc_level_rep,
layer2_A1.output_sent_rep_Dlevel), 'simi_doc_level1')
#simi_doc_level2=debug_print(cosine(layer3_DA2.output_D_doc_level_rep, layer2_A2.output_sent_rep_Dlevel), 'simi_doc_level2')
# simi_doc_level3=debug_print(cosine(layer3_DA3.output_D_doc_level_rep, layer2_A3.output_sent_rep_Dlevel), 'simi_doc_level3')
# simi_doc_level4=debug_print(cosine(layer3_DA4.output_D_doc_level_rep, layer2_A4.output_sent_rep_Dlevel), 'simi_doc_level4')
simi_overall_level1 = debug_print(cosine(overall_D_A1, overall_A1),
'simi_overall_level1')
#simi_overall_level2=debug_print(cosine(overall_D_A2, overall_A2), 'simi_overall_level2')
# simi_overall_level3=debug_print(cosine(overall_D_A3, overall_A3), 'simi_overall_level3')
# simi_overall_level4=debug_print(cosine(overall_D_A4, overall_A4), 'simi_overall_level4')
# simi_1=simi_overall_level1+simi_sent_level1+simi_doc_level1
# simi_2=simi_overall_level2+simi_sent_level2+simi_doc_level2
simi_1 = (simi_overall_level1 + simi_sent_level1 + simi_doc_level1) / 3.0
#simi_1 = simi_doc_level1
#simi_2=(simi_overall_level2+simi_sent_level2+simi_doc_level2)/3.0
# simi_3=(simi_overall_level3+simi_sent_level3+simi_doc_level3)/3.0
# simi_4=(simi_overall_level4+simi_sent_level4+simi_doc_level4)/3.0
logistic_w, logistic_b = create_logistic_para(rng, 1, 2)
logistic_para = [logistic_w, logistic_b]
sent_w, sent_b = create_logistic_para(rng, 1, 2)
doc_w, doc_b = create_logistic_para(rng, 1, 2)
sent_para = [sent_w, sent_b]
doc_para = [doc_w, doc_b]
params += logistic_para
params += sent_para
params += doc_para
load_model(params, model_filename)
simi_sent = T.dot(sent_w, simi_sent_level1) + sent_b.dimshuffle(0, 'x')
simi_sent = simi_sent.dimshuffle(1, 0)
simi_sent = T.nnet.softmax(simi_sent)
tmp_sent = T.log(simi_sent)
simi_doc = T.dot(doc_w, simi_doc_level1) + doc_b.dimshuffle(0, 'x')
simi_doc = simi_doc.dimshuffle(1, 0)
simi_doc = T.nnet.softmax(simi_doc)
tmp_doc = T.log(simi_doc)
#cost = margin - simi_1
simi_overall = T.dot(logistic_w,
simi_overall_level1) + logistic_b.dimshuffle(0, 'x')
simi_overall = simi_overall.dimshuffle(1, 0)
simi_overall = T.nnet.softmax(simi_overall)
predict = T.argmax(simi_overall, axis=1)
tmp_overall = T.log(simi_overall)
cost = -(tmp_overall[0][y] + tmp_doc[0][y] + tmp_sent[0][y]) / 3.0
L2_reg = (conv2_W**2).sum() + (conv_W**2).sum() + (logistic_w**2).sum() + (
high_W**2).sum()
cost = cost + L2_weight * L2_reg
#simi_1 = [simi_overall,simi_doc,simi_sent]
# eucli_1=1.0/(1.0+EUCLID(layer3_DQ.output_D+layer3_DA.output_D, layer3_DQ.output_QA+layer3_DA.output_QA))
# #only use overall_simi
# cost=T.maximum(0.0, margin+T.max([simi_overall_level2, simi_overall_level3, simi_overall_level4])-simi_overall_level1) # ranking loss: max(0, margin-nega+posi)
# posi_simi=simi_overall_level1
# nega_simi=T.max([simi_overall_level2, simi_overall_level3, simi_overall_level4])
#use ensembled simi
# cost=T.maximum(0.0, margin+T.max([simi_2, simi_3, simi_4])-simi_1) # ranking loss: max(0, margin-nega+posi)
# cost=T.maximum(0.0, margin+simi_2-simi_1)
#cost=T.maximum(0.0, margin+simi_sent_level2-simi_sent_level1)+T.maximum(0.0, margin+simi_doc_level2-simi_doc_level1)+T.maximum(0.0, margin+simi_overall_level2-simi_overall_level1)
# posi_simi=simi_1
# nega_simi=simi_2
#L2_reg =debug_print((high_W**2).sum()+(conv2_W**2).sum()+(conv_W**2).sum(), 'L2_reg')#+(embeddings**2).sum(), 'L2_reg')#+(layer1.W** 2).sum()++(embeddings**2).sum()
#cost=debug_print(cost+L2_weight*L2_reg, 'cost')
#cost=debug_print((cost_this+cost_tmp)/update_freq, 'cost')
test_model = theano.function(
[index],
[cost, simi_overall, simi_doc, simi_sent, predict],
givens={
index_D: test_data_D[index], #a matrix
# index_Q: test_data_Q[index],
index_A1: test_data_A1[index],
y: test_Label[index],
len_D: test_Length_D[index],
len_D_s: test_Length_D_s[index],
# len_Q: test_Length_Q[index],
len_A1: test_Length_A1[index],
# len_A2: test_Length_A2[index],
# len_A3: test_Length_A3[index],
# len_A4: test_Length_A4[index],
left_D: test_leftPad_D[index],
left_D_s: test_leftPad_D_s[index],
# left_Q: test_leftPad_Q[index],
left_A1: test_leftPad_A1[index],
# left_A2: test_leftPad_A2[index],
# left_A3: test_leftPad_A3[index],
# left_A4: test_leftPad_A4[index],
right_D: test_rightPad_D[index],
right_D_s: test_rightPad_D_s[index],
# right_Q: test_rightPad_Q[index],
right_A1: test_rightPad_A1[index],
},
on_unused_input='ignore')
accumulator = []
for para_i in params:
eps_p = numpy.zeros_like(para_i.get_value(borrow=True),
dtype=theano.config.floatX)
accumulator.append(theano.shared(eps_p, borrow=True))
# create a list of gradients for all model parameters
grads = T.grad(cost, params)
updates = []
for param_i, grad_i, acc_i in zip(params, grads, accumulator):
grad_i = debug_print(grad_i, 'grad_i')
acc = acc_i + T.sqr(grad_i)
updates.append(
(param_i,
param_i - learning_rate * grad_i / T.sqrt(acc))) #AdaGrad
updates.append((acc_i, acc))
# for param_i, grad_i, acc_i in zip(params, grads, accumulator):
# acc = acc_i + T.sqr(grad_i)
# if param_i == embeddings:
# updates.append((param_i, T.set_subtensor((param_i - learning_rate * grad_i / T.sqrt(acc))[0], theano.shared(numpy.zeros(emb_size))))) #AdaGrad
# else:
# updates.append((param_i, param_i - learning_rate * grad_i / T.sqrt(acc))) #AdaGrad
# updates.append((acc_i, acc))
train_model = theano.function(
[index],
[cost, simi_overall, simi_doc, simi_sent, predict],
updates=updates,
givens={
index_D: train_data_D[index],
# index_Q: train_data_Q[index],
index_A1: train_data_A1[index],
# index_A2: train_data_A2[index],
# index_A3: train_data_A3[index],
# index_A4: train_data_A4[index],
y: train_Label[index],
len_D: train_Length_D[index],
len_D_s: train_Length_D_s[index],
# len_Q: train_Length_Q[index],
len_A1: train_Length_A1[index],
# len_A2: train_Length_A2[index],
# len_A3: train_Length_A3[index],
# len_A4: train_Length_A4[index],
left_D: train_leftPad_D[index],
left_D_s: train_leftPad_D_s[index],
# left_Q: train_leftPad_Q[index],
left_A1: train_leftPad_A1[index],
# left_A2: train_leftPad_A2[index],
# left_A3: train_leftPad_A3[index],
# left_A4: train_leftPad_A4[index],
right_D: train_rightPad_D[index],
right_D_s: train_rightPad_D_s[index],
# right_Q: train_rightPad_Q[index],
right_A1: train_rightPad_A1[index],
# right_A2: train_rightPad_A2[index]
# right_A3: train_rightPad_A3[index],
# right_A4: train_rightPad_A4[index]
},
on_unused_input='ignore')
###############
# TRAIN MODEL #
###############
f.write('... training\n')
# early-stopping parameters
patience = 500000000000000 # look as this many examples regardless
patience_increase = 2 # wait this much longer when a new best is
# found
improvement_threshold = 0.995 # a relative improvement of this much is
# considered significant
validation_frequency = min(n_train_batches, patience / 2)
# go through this many
# minibatche before checking the network
# on the validation set; in this case we
# check every epoch
cost, simi_overall, simi_doc, simi_sent, predict = test_model(0)
cost, simi_overall1, simi_doc, simi_sent, predict = test_model(1)
cost, simi_overall2, simi_doc, simi_sent, predict = test_model(2)
cost, simi_overall3, simi_doc, simi_sent, predict = test_model(3)
return simi_overall, simi_overall1, simi_overall2, simi_overall3
'''