def create_ConPlot(plot_click, refresh_click, factor, contact_marker_size,
track_marker_size, track_separation, track_selection,
cmap_selection, transparent, superimpose, distance_matrix,
verbose_labels, selected_palettes, session_id):
trigger = dash.callback_context.triggered[0]
cache = keydb.KeyDB(connection_pool=keydb_pool)
if not callback_utils.ensure_triggered(trigger):
return no_update, None, no_update, no_update
elif session_utils.is_expired_session(session_id, cache, app.logger):
return components.PlotPlaceHolder(), components.SessionTimedOutModal(
), components.DisplayControlCard(), True
app.logger.info('Session {} plot requested'.format(session_id))
if any([
True for x in (factor, contact_marker_size, track_marker_size,
track_separation) if x is None or x < 0
]):
app.logger.info(
'Session {} invalid display control value detected'.format(
session_id))
return no_update, components.InvalidInputModal(), no_update, no_update
elif superimpose and ('--- Empty ---' in cmap_selection
or len(set(cmap_selection)) == 1):
return no_update, components.InvalidMapSelectionModal(
), no_update, no_update
app.logger.info('Session {} creating conplot'.format(session_id))
return plot_utils.create_ConPlot(
session_id, cache, trigger, track_selection, cmap_selection,
selected_palettes, factor, contact_marker_size, track_marker_size,
track_separation, transparent, superimpose, distance_matrix,
verbose_labels)
def remove_dataset(alerts_open, session_id):
trigger = dash.callback_context.triggered[-1]
cache = keydb.KeyDB(connection_pool=keydb_pool)
if not callback_utils.ensure_triggered(trigger):
return None
elif session_utils.is_expired_session(session_id, cache, app.logger):
return components.SessionTimedOutModal()
data_utils.remove_dataset(trigger, cache, session_id, app.logger)
return None
def create_user(n_clicks, username, password, email, session_id):
trigger = dash.callback_context.triggered[0]
cache = keydb.KeyDB(connection_pool=keydb_pool)
if session_utils.is_expired_session(session_id, cache, app.logger):
return no_update, components.SessionTimedOutModal(
), no_update, no_update, no_update, no_update
elif not callback_utils.ensure_triggered(trigger):
return no_update, no_update, no_update, no_update, no_update, no_update
return app_utils.create_user(username, password, email, session_id, cache,
app.logger)
def submit_contact_form(n_clicks, name, email, subject, description,
session_id):
trigger = dash.callback_context.triggered[0]
cache = keydb.KeyDB(connection_pool=keydb_pool)
if session_utils.is_expired_session(session_id, cache, app.logger):
return components.SessionTimedOutModal(), None, None, None, None
elif not callback_utils.ensure_triggered(trigger):
return no_update, no_update, no_update, no_update, no_update
return callback_utils.submit_form(name, email, subject, description,
app.logger), None, None, None, None
def upload_additional_track(fname, fcontent, input_format, fname_alerts,
session_id):
trigger = dash.callback_context.triggered[0]
cache = keydb.KeyDB(connection_pool=keydb_pool)
if session_utils.is_expired_session(session_id, cache, app.logger):
return no_update, None, components.SessionTimedOutModal()
elif not callback_utils.ensure_triggered(trigger):
return callback_utils.retrieve_additional_fnames(session_id,
cache), None, None
return data_utils.upload_dataset(fname, fcontent, input_format,
fname_alerts, session_id, cache,
app.logger)
def upload_sequence(fname, fcontent, session_id):
trigger = dash.callback_context.triggered[0]
cache = keydb.KeyDB(connection_pool=keydb_pool)
if session_utils.is_expired_session(session_id, cache, app.logger):
return no_update, None, components.SessionTimedOutModal()
elif not callback_utils.ensure_triggered(trigger):
return callback_utils.retrieve_sequence_fname(session_id,
cache), None, None
elif not cache_utils.is_valid_fname(fname):
return no_update, no_update, components.InvalidFnameModal(fname)
return data_utils.upload_sequence(fname, fcontent, session_id, cache,
app.logger)
def upload_contact(fname, fcontent, input_format, fname_alerts, session_id):
trigger = dash.callback_context.triggered[0]
cache = keydb.KeyDB(connection_pool=keydb_pool)
if session_utils.is_expired_session(session_id, cache, app.logger):
return no_update, None, components.SessionTimedOutModal()
elif not callback_utils.ensure_triggered(trigger):
return callback_utils.retrieve_contact_fnames(session_id,
cache), None, None
elif not cache_utils.is_valid_fname(fname):
return no_update, no_update, components.InvalidFnameModal(fname)
return data_utils.upload_dataset(
fname,
fcontent,
input_format,
fname_alerts,
session_id,
cache,
app.logger,
dataset=loaders.DatasetReference.CONTACT_MAP.value)