def test_lookup(self):
test_dictionary = json.loads('{"openfda": "testing"}')
test_string = 'openfda'
result = ApiResult({})
value = result.lookup(test_dictionary, test_string)
self.assertEquals(value, 'testing')
test_dictionary = json.loads('{"openfda": {"brand_name": "testing"}}')
test_string = 'openfda.brand_name'
value = result.lookup(test_dictionary, test_string)
self.assertEquals(value, 'testing')
def test_lookup(self):
test_dictionary = json.loads('{"openfda": "testing"}')
test_string = 'openfda'
result = ApiResult({})
value = result.lookup(test_dictionary, test_string)
self.assertEquals(value, 'testing')
test_dictionary = json.loads('{"openfda": {"brand_name": "testing"}}')
test_string = 'openfda.brand_name'
value = result.lookup(test_dictionary, test_string)
self.assertEquals(value, 'testing')
def test_clean_labels(self):
test_dictionary = json.loads("""
{"meta": {
"results": {
"skip": 0,
"limit": 1,
"total": 72590
}
},
"results": [
{
"dosage_and_administration": [
"Directions Protection"
],
"id": "f229e866-5775-4e42-a316-8480dd92fec6",
"active_ingredient": [
"BRONZE ACTIVE INGREDIENTS: TITANIUM DIOXIDE 2 %"
],
"inactive_ingredient": [
"INGREDIENTS: TALC, POLYMETHYL METHACRYLATE"
],
"openfda": {
"spl_id": [
"50de8449-69cf-4593-bdac-4aae7e7b4b7b"
],
"route": [
"TOPICAL"
],
"substance_name": [
"OCTINOXATE",
"TITANIUM DIOXIDE",
"ZINC OXIDE"
],
"generic_name": [
"TITANIUM DIOXIDE, OCTINOXATE, ZINC OXIDE"
],
"manufacturer_name": [
"Chantecaille Beaute Inc"
],
"brand_name": [
"CHANTECAILLE"
]
}
}]}
""")
result = ApiResult(test_dictionary)
meta, results = result.clean_labels()
self.assertEquals(meta['total'], 72590)
def test_clean_labels(self):
test_dictionary = json.loads("""
{"meta": {
"results": {
"skip": 0,
"limit": 1,
"total": 72590
}
},
"results": [
{
"dosage_and_administration": [
"Directions Protection"
],
"id": "f229e866-5775-4e42-a316-8480dd92fec6",
"active_ingredient": [
"BRONZE ACTIVE INGREDIENTS: TITANIUM DIOXIDE 2 %"
],
"inactive_ingredient": [
"INGREDIENTS: TALC, POLYMETHYL METHACRYLATE"
],
"openfda": {
"spl_id": [
"50de8449-69cf-4593-bdac-4aae7e7b4b7b"
],
"route": [
"TOPICAL"
],
"substance_name": [
"OCTINOXATE",
"TITANIUM DIOXIDE",
"ZINC OXIDE"
],
"generic_name": [
"TITANIUM DIOXIDE, OCTINOXATE, ZINC OXIDE"
],
"manufacturer_name": [
"Chantecaille Beaute Inc"
],
"brand_name": [
"CHANTECAILLE"
]
}
}]}
""")
result = ApiResult(test_dictionary)
meta, results = result.clean_labels()
self.assertEquals(meta['total'], 72590)
def test_clean_enforcements(self):
test_dictionary = json.loads("""
{
"meta": {
"results": {
"skip": 0,
"limit": 1,
"total": 3769
}
},
"results": [
{
"recall_number": "D-0167-2015",
"reason_for_recall": "Lack of Assurance of Sterility:...",
"status": "Ongoing",
"distribution_pattern": "Nationwide",
"product_quantity": "60 mL",
"recall_initiation_date": "20140827",
"state": "IL",
"event_id": "69152",
"product_type": "Drugs",
"product_description": "Tri-mix T50, 8.825 mg/0.29 mg/2.95 mcg/mL...",
"country": "US",
"city": "Naperville",
"recalling_firm": "Martin Avenue Pharmacy, Inc.",
"report_date": "20141105",
"@epoch": 1424553174.836488,
"voluntary_mandated": "Voluntary: Firm Initiated",
"classification": "Class II",
"code_info": "Lot Number: 07142014@48, Exp 9/30/2014",
"@id": "000d4ccfcaf0512bd20916cdd38775d2757118fcbafcdd7ea735f16d88622103",
"openfda": {
"manufacturer_name": [
"Pharmacia and Upjohn Company"
]},
"initial_firm_notification": "Two or more of the following: Email, Fax, Letter, Press Release, Telephone, Visit"
}
]
}
""")
result = ApiResult(test_dictionary)
meta, results = result.clean_enforcements()
self.assertEquals(meta['total'], 3769)
def test_clean_enforcements(self):
test_dictionary = json.loads("""
{
"meta": {
"results": {
"skip": 0,
"limit": 1,
"total": 3769
}
},
"results": [
{
"recall_number": "D-0167-2015",
"reason_for_recall": "Lack of Assurance of Sterility:...",
"status": "Ongoing",
"distribution_pattern": "Nationwide",
"product_quantity": "60 mL",
"recall_initiation_date": "20140827",
"state": "IL",
"event_id": "69152",
"product_type": "Drugs",
"product_description": "Tri-mix T50, 8.825 mg/0.29 mg/2.95 mcg/mL...",
"country": "US",
"city": "Naperville",
"recalling_firm": "Martin Avenue Pharmacy, Inc.",
"report_date": "20141105",
"@epoch": 1424553174.836488,
"voluntary_mandated": "Voluntary: Firm Initiated",
"classification": "Class II",
"code_info": "Lot Number: 07142014@48, Exp 9/30/2014",
"@id": "000d4ccfcaf0512bd20916cdd38775d2757118fcbafcdd7ea735f16d88622103",
"openfda": {
"manufacturer_name": [
"Pharmacia and Upjohn Company"
]},
"initial_firm_notification": "Two or more of the following: Email, Fax, Letter, Press Release, Telephone, Visit"
}
]
}
""")
result = ApiResult(test_dictionary)
meta, results = result.clean_enforcements()
self.assertEquals(meta['total'], 3769)
def test_male_or_female(self):
result = ApiResult({})
self.assertEquals(result.male_or_female("1"), "Male")
self.assertEquals(result.male_or_female("2"), "Female")
self.assertEquals(result.male_or_female("0"), "Unknown")
self.assertEquals(result.male_or_female("x"), None)
def test_clean_events(self):
test_dictionary = json.loads("""
{
"meta": {
"results": {
"skip": 0,
"limit": 1,
"total": 4587031
}
},
"results": [
{
"safetyreportid": "4322505-4",
"receiver": null,
"receivedateformat": "102",
"receiptdateformat": "102",
"primarysource": null,
"receivedate": "20040319",
"seriousnessother": "1",
"patient": {
"patientonsetage": "56",
"patientonsetageunit": "801",
"drug": [
{
"drugtreatmentdurationunit": "804",
"drugauthorizationnumb": "50621",
"drugtreatmentduration": "4",
"drugstartdateformat": "102",
"drugcharacterization": "1",
"drugindication": "PYELONEPHRITIS",
"medicinalproduct": "OROKEN (CEFIXIME, UNSPEC)",
"drugadministrationroute": "048",
"drugdosagetext": "ORAL",
"drugstartdate": "20031227",
"drugenddate": "20031230",
"drugenddateformat": "102"
},
{
"drugcharacterization": "2",
"medicinalproduct": "ROCEPHIN",
"openfda": {
"unii": [
"75J73V1629"
],
"spl_id": [
"86e3103c-9d8b-4693-b5db-3fd62330c754"
],
"substance_name": [
"CEFTRIAXONE SODIUM"
],
"product_type": [
"HUMAN PRESCRIPTION DRUG"
],
"pharm_class_cs": [
"Cephalosporins [Chemical/Ingredient]"
],
"manufacturer_name": [
"Genentech, Inc."
],
"brand_name": [
"ROCEPHIN"
],
"route": [
"INTRAMUSCULAR",
"INTRAVENOUS"
],
"pharm_class_epc": [
"Cephalosporin Antibacterial [EPC]"
],
"generic_name": [
"CEFTRIAXONE SODIUM"
]
}
},
{
"drugcharacterization": "2",
"medicinalproduct": "OFLOXACIN",
"openfda": {
"unii": [
"A4P49JAZ9H"
],
"substance_name": [
"OFLOXACIN"
],
"product_type": [
"HUMAN PRESCRIPTION DRUG"
],
"pharm_class_cs": [
"Quinolones [Chemical/Ingredient]"
],
"manufacturer_name": [
"Akorn, Inc.",
"Altaire Pharmaceuticals Inc.",
"Dr. Reddy's Laboratories Limited",
"Pack Pharmaceuticals, LLC",
"Hi-Tech Pharmacal Co., Inc.",
"Allergan, Inc.",
"Bausch & Lomb Incorporated",
"Apotex Corp.",
"Cadila Pharmaceuticals Limited",
"PharmaForce, Inc.",
"Falcon Pharmaceuticals, Ltd.",
"Teva Pharmaceuticals USA Inc"
],
"brand_name": [
"OFLOXACIN OTIC",
"OFLOXACIN OPHTHALMIC",
"OFLOXACIN",
"OCUFLOX"
],
"route": [
"AURICULAR (OTIC)",
"ORAL",
"OPHTHALMIC"
],
"nui": [
"N0000175937",
"N0000007606"
],
"pharm_class_epc": [
"Quinolone Antimicrobial [EPC]"
],
"generic_name": [
"OFLOXACIN",
"OFLOXAXIN"
]
}
}
],
"patientsex": "1"
},
"receiptdate": "20040315",
"transmissiondate": "20041129",
"transmissiondateformat": "102",
"seriousnesshospitalization": "1",
"serious": "1",
"companynumb": "HQWYE821915MAR04"
}
]
}
""")
result = ApiResult(test_dictionary)
meta, results = result.clean_events()
self.assertEquals(meta['total'], 4587031)
def test_lookup_missing_keylist(self):
test_dictionary = json.loads('{"openfda": {"brand_name": "testing"}}')
test_string = 'openfda'
result = ApiResult({})
value = result.lookup(test_dictionary, test_string, "xyz")
self.assertEquals(value, 'xyz')
def test_male_or_female(self):
result = ApiResult({})
self.assertEquals(result.male_or_female("1"), "Male")
self.assertEquals(result.male_or_female("2"), "Female")
self.assertEquals(result.male_or_female("0"), "Unknown")
self.assertEquals(result.male_or_female("x"), None)
def test_clean_events(self):
test_dictionary = json.loads("""
{
"meta": {
"results": {
"skip": 0,
"limit": 1,
"total": 4587031
}
},
"results": [
{
"safetyreportid": "4322505-4",
"receiver": null,
"receivedateformat": "102",
"receiptdateformat": "102",
"primarysource": null,
"receivedate": "20040319",
"seriousnessother": "1",
"patient": {
"patientonsetage": "56",
"patientonsetageunit": "801",
"drug": [
{
"drugtreatmentdurationunit": "804",
"drugauthorizationnumb": "50621",
"drugtreatmentduration": "4",
"drugstartdateformat": "102",
"drugcharacterization": "1",
"drugindication": "PYELONEPHRITIS",
"medicinalproduct": "OROKEN (CEFIXIME, UNSPEC)",
"drugadministrationroute": "048",
"drugdosagetext": "ORAL",
"drugstartdate": "20031227",
"drugenddate": "20031230",
"drugenddateformat": "102"
},
{
"drugcharacterization": "2",
"medicinalproduct": "ROCEPHIN",
"openfda": {
"unii": [
"75J73V1629"
],
"spl_id": [
"86e3103c-9d8b-4693-b5db-3fd62330c754"
],
"substance_name": [
"CEFTRIAXONE SODIUM"
],
"product_type": [
"HUMAN PRESCRIPTION DRUG"
],
"pharm_class_cs": [
"Cephalosporins [Chemical/Ingredient]"
],
"manufacturer_name": [
"Genentech, Inc."
],
"brand_name": [
"ROCEPHIN"
],
"route": [
"INTRAMUSCULAR",
"INTRAVENOUS"
],
"pharm_class_epc": [
"Cephalosporin Antibacterial [EPC]"
],
"generic_name": [
"CEFTRIAXONE SODIUM"
]
}
},
{
"drugcharacterization": "2",
"medicinalproduct": "OFLOXACIN",
"openfda": {
"unii": [
"A4P49JAZ9H"
],
"substance_name": [
"OFLOXACIN"
],
"product_type": [
"HUMAN PRESCRIPTION DRUG"
],
"pharm_class_cs": [
"Quinolones [Chemical/Ingredient]"
],
"manufacturer_name": [
"Akorn, Inc.",
"Altaire Pharmaceuticals Inc.",
"Dr. Reddy's Laboratories Limited",
"Pack Pharmaceuticals, LLC",
"Hi-Tech Pharmacal Co., Inc.",
"Allergan, Inc.",
"Bausch & Lomb Incorporated",
"Apotex Corp.",
"Cadila Pharmaceuticals Limited",
"PharmaForce, Inc.",
"Falcon Pharmaceuticals, Ltd.",
"Teva Pharmaceuticals USA Inc"
],
"brand_name": [
"OFLOXACIN OTIC",
"OFLOXACIN OPHTHALMIC",
"OFLOXACIN",
"OCUFLOX"
],
"route": [
"AURICULAR (OTIC)",
"ORAL",
"OPHTHALMIC"
],
"nui": [
"N0000175937",
"N0000007606"
],
"pharm_class_epc": [
"Quinolone Antimicrobial [EPC]"
],
"generic_name": [
"OFLOXACIN",
"OFLOXAXIN"
]
}
}
],
"patientsex": "1"
},
"receiptdate": "20040315",
"transmissiondate": "20041129",
"transmissiondateformat": "102",
"seriousnesshospitalization": "1",
"serious": "1",
"companynumb": "HQWYE821915MAR04"
}
]
}
""")
result = ApiResult(test_dictionary)
meta, results = result.clean_events()
self.assertEquals(meta['total'], 4587031)
def test_lookup_missing_keylist(self):
test_dictionary = json.loads('{"openfda": {"brand_name": "testing"}}')
test_string = 'openfda'
result = ApiResult({})
value = result.lookup(test_dictionary, test_string, "xyz")
self.assertEquals(value, 'xyz')